##gff-version 3
HG00140_chrY	CAT	gene	79114	80462	.	+	.	source_gene_common_name=ENSG00000292329;source_gene=ENSG00000292329.1;alternative_source_transcripts=ENST00000711121.1,ENST00000711121.1;gene_id=HG00140_ch_G0000001;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000292329;gene_sources=liftoff;ID=HG00140_ch_G0000001;Name=ENSG00000292329
HG00140_chrY	CAT	transcript	79114	80462	1000	+	.	source_transcript=ENST00000711121.1;source_transcript_name=ENST00000711121;source_gene=ENSG00000292329.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292329.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711121.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711121.1;transcript_score=299.61400000000003;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292329;alternative_source_transcripts=ENST00000711121.1,ENST00000711121.1;transcript_id=HG00140_ch_T0000001;gene_id=HG00140_ch_G0000001;Parent=HG00140_ch_G0000001;transcript_name=HG00140_ch_T0000001;gene_name=ENSG00000292329;ID=HG00140_ch_T0000001;Name=ENSG00000292329
HG00140_chrY	CAT	exon	79114	79217	.	+	.	source_transcript=ENST00000711121.1;source_transcript_name=ENST00000711121;source_gene=ENSG00000292329.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292329.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711121.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711121.1;transcript_score=299.61400000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292329;alternative_source_transcripts=ENST00000711121.1,ENST00000711121.1;transcript_id=HG00140_ch_T0000001;gene_id=HG00140_ch_G0000001;Parent=HG00140_ch_T0000001;transcript_name=HG00140_ch_T0000001;gene_name=ENSG00000292329;ID=exon:HG00140_ch_T0000001:0;Name=ENSG00000292329;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	79218	80307	.	+	.	source_transcript=ENST00000711121.1;source_transcript_name=ENST00000711121;source_gene=ENSG00000292329.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292329.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711121.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711121.1;transcript_score=299.61400000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292329;alternative_source_transcripts=ENST00000711121.1,ENST00000711121.1;transcript_id=HG00140_ch_T0000001;gene_id=HG00140_ch_G0000001;Parent=HG00140_ch_T0000001;transcript_name=HG00140_ch_T0000001;gene_name=ENSG00000292329;ID=intron:HG00140_ch_T0000001:0;Name=ENSG00000292329;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	80308	80462	.	+	.	source_transcript=ENST00000711121.1;source_transcript_name=ENST00000711121;source_gene=ENSG00000292329.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292329.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711121.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711121.1;transcript_score=299.61400000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292329;alternative_source_transcripts=ENST00000711121.1,ENST00000711121.1;transcript_id=HG00140_ch_T0000001;gene_id=HG00140_ch_G0000001;Parent=HG00140_ch_T0000001;transcript_name=HG00140_ch_T0000001;gene_name=ENSG00000292329;ID=exon:HG00140_ch_T0000001:1;Name=ENSG00000292329;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	93048	117231	.	-	.	source_gene_common_name=ENSG00000310553;source_gene=ENSG00000310553.1;alternative_source_transcripts=ENST00000850732.1;gene_id=HG00140_ch_G0000002;gene_biotype=lncRNA;gene_name=ENSG00000310553;gene_sources=liftoff,transMap;ID=HG00140_ch_G0000002;Name=ENSG00000310553
HG00140_chrY	CAT	transcript	93048	117231	1000	-	.	source_transcript=ENST00000850732.1;source_transcript_name=ENST00000850732;source_gene=ENSG00000310553.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310553.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850732.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850732.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310553;alternative_source_transcripts=ENST00000850732.1;transcript_id=HG00140_ch_T0000002;gene_id=HG00140_ch_G0000002;Parent=HG00140_ch_G0000002;transcript_name=HG00140_ch_T0000002;gene_name=ENSG00000310553;ID=HG00140_ch_T0000002;Name=ENSG00000310553
HG00140_chrY	CAT	exon	93048	93239	.	-	.	source_transcript=ENST00000850732.1;source_transcript_name=ENST00000850732;source_gene=ENSG00000310553.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310553.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850732.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850732.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310553;alternative_source_transcripts=ENST00000850732.1;transcript_id=HG00140_ch_T0000002;gene_id=HG00140_ch_G0000002;Parent=HG00140_ch_T0000002;transcript_name=HG00140_ch_T0000002;gene_name=ENSG00000310553;ID=exon:HG00140_ch_T0000002:0;Name=ENSG00000310553;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	93240	116703	.	-	.	source_transcript=ENST00000850732.1;source_transcript_name=ENST00000850732;source_gene=ENSG00000310553.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310553.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850732.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850732.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310553;alternative_source_transcripts=ENST00000850732.1;transcript_id=HG00140_ch_T0000002;gene_id=HG00140_ch_G0000002;Parent=HG00140_ch_T0000002;transcript_name=HG00140_ch_T0000002;gene_name=ENSG00000310553;ID=intron:HG00140_ch_T0000002:0;Name=ENSG00000310553;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	116704	116842	.	-	.	source_transcript=ENST00000850732.1;source_transcript_name=ENST00000850732;source_gene=ENSG00000310553.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310553.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850732.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850732.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310553;alternative_source_transcripts=ENST00000850732.1;transcript_id=HG00140_ch_T0000002;gene_id=HG00140_ch_G0000002;Parent=HG00140_ch_T0000002;transcript_name=HG00140_ch_T0000002;gene_name=ENSG00000310553;ID=exon:HG00140_ch_T0000002:1;Name=ENSG00000310553;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	116843	117082	.	-	.	source_transcript=ENST00000850732.1;source_transcript_name=ENST00000850732;source_gene=ENSG00000310553.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310553.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850732.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850732.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310553;alternative_source_transcripts=ENST00000850732.1;transcript_id=HG00140_ch_T0000002;gene_id=HG00140_ch_G0000002;Parent=HG00140_ch_T0000002;transcript_name=HG00140_ch_T0000002;gene_name=ENSG00000310553;ID=intron:HG00140_ch_T0000002:1;Name=ENSG00000310553;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	117083	117231	.	-	.	source_transcript=ENST00000850732.1;source_transcript_name=ENST00000850732;source_gene=ENSG00000310553.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310553.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850732.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850732.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310553;alternative_source_transcripts=ENST00000850732.1;transcript_id=HG00140_ch_T0000002;gene_id=HG00140_ch_G0000002;Parent=HG00140_ch_T0000002;transcript_name=HG00140_ch_T0000002;gene_name=ENSG00000310553;ID=exon:HG00140_ch_T0000002:2;Name=ENSG00000310553;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	116704	117231	1000	-	.	source_transcript=ENST00000850732.1;source_transcript_name=ENST00000850732;source_gene=ENSG00000310553.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310553.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850732.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310553;transcript_id=HG00140_ch_T0000003;gene_id=HG00140_ch_G0000002;Parent=HG00140_ch_G0000002;transcript_name=HG00140_ch_T0000003;gene_name=ENSG00000310553;ID=HG00140_ch_T0000003;Name=ENSG00000310553
HG00140_chrY	CAT	exon	116704	116842	.	-	.	source_transcript=ENST00000850732.1;source_transcript_name=ENST00000850732;source_gene=ENSG00000310553.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310553.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850732.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310553;transcript_id=HG00140_ch_T0000003;gene_id=HG00140_ch_G0000002;Parent=HG00140_ch_T0000003;transcript_name=HG00140_ch_T0000003;gene_name=ENSG00000310553;ID=exon:HG00140_ch_T0000003:0;Name=ENSG00000310553;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	116843	117082	.	-	.	source_transcript=ENST00000850732.1;source_transcript_name=ENST00000850732;source_gene=ENSG00000310553.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310553.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850732.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310553;transcript_id=HG00140_ch_T0000003;gene_id=HG00140_ch_G0000002;Parent=HG00140_ch_T0000003;transcript_name=HG00140_ch_T0000003;gene_name=ENSG00000310553;ID=intron:HG00140_ch_T0000003:0;Name=ENSG00000310553;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	117083	117231	.	-	.	source_transcript=ENST00000850732.1;source_transcript_name=ENST00000850732;source_gene=ENSG00000310553.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310553.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850732.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310553;transcript_id=HG00140_ch_T0000003;gene_id=HG00140_ch_G0000002;Parent=HG00140_ch_T0000003;transcript_name=HG00140_ch_T0000003;gene_name=ENSG00000310553;ID=exon:HG00140_ch_T0000003:1;Name=ENSG00000310553;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	117343	143790	.	+	.	source_gene_common_name=PLCXD1;source_gene=ENSG00000292344.1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;gene_id=HG00140_ch_G0000003;gene_biotype=protein_coding;gene_name=PLCXD1;gene_sources=liftoff;ID=HG00140_ch_G0000003;Name=PLCXD1
HG00140_chrY	CAT	transcript	117343	143787	100	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG00140_ch_T0000004;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_G0000003;transcript_name=HG00140_ch_T0000004;gene_name=PLCXD1;ID=HG00140_ch_T0000004;Name=PLCXD1
HG00140_chrY	CAT	exon	117343	117415	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG00140_ch_T0000004;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000004;transcript_name=HG00140_ch_T0000004;gene_name=PLCXD1;ID=exon:HG00140_ch_T0000004:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	117416	122559	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG00140_ch_T0000004;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000004;transcript_name=HG00140_ch_T0000004;gene_name=PLCXD1;ID=intron:HG00140_ch_T0000004:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	122560	122762	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG00140_ch_T0000004;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000004;transcript_name=HG00140_ch_T0000004;gene_name=PLCXD1;ID=exon:HG00140_ch_T0000004:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	122763	125244	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG00140_ch_T0000004;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000004;transcript_name=HG00140_ch_T0000004;gene_name=PLCXD1;ID=intron:HG00140_ch_T0000004:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	125245	125392	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG00140_ch_T0000004;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000004;transcript_name=HG00140_ch_T0000004;gene_name=PLCXD1;ID=exon:HG00140_ch_T0000004:2;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	125266	125392	.	+	0	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG00140_ch_T0000004;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000004;transcript_name=HG00140_ch_T0000004;gene_name=PLCXD1;ID=CDS:HG00140_ch_T0000004:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	125266	125268	.	+	0	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG00140_ch_T0000004;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000004;transcript_name=HG00140_ch_T0000004;gene_name=PLCXD1;ID=start_codon:HG00140_ch_T0000004;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	125393	129800	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG00140_ch_T0000004;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000004;transcript_name=HG00140_ch_T0000004;gene_name=PLCXD1;ID=intron:HG00140_ch_T0000004:2;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	129801	129937	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG00140_ch_T0000004;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000004;transcript_name=HG00140_ch_T0000004;gene_name=PLCXD1;ID=exon:HG00140_ch_T0000004:3;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	129801	129937	.	+	2	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG00140_ch_T0000004;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000004;transcript_name=HG00140_ch_T0000004;gene_name=PLCXD1;ID=CDS:HG00140_ch_T0000004:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	129938	131715	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG00140_ch_T0000004;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000004;transcript_name=HG00140_ch_T0000004;gene_name=PLCXD1;ID=intron:HG00140_ch_T0000004:3;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	131716	131844	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG00140_ch_T0000004;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000004;transcript_name=HG00140_ch_T0000004;gene_name=PLCXD1;ID=exon:HG00140_ch_T0000004:4;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	131716	131844	.	+	0	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG00140_ch_T0000004;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000004;transcript_name=HG00140_ch_T0000004;gene_name=PLCXD1;ID=CDS:HG00140_ch_T0000004:2;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	131845	132566	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG00140_ch_T0000004;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000004;transcript_name=HG00140_ch_T0000004;gene_name=PLCXD1;ID=intron:HG00140_ch_T0000004:4;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	132567	132722	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG00140_ch_T0000004;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000004;transcript_name=HG00140_ch_T0000004;gene_name=PLCXD1;ID=exon:HG00140_ch_T0000004:5;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	132567	132722	.	+	0	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG00140_ch_T0000004;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000004;transcript_name=HG00140_ch_T0000004;gene_name=PLCXD1;ID=CDS:HG00140_ch_T0000004:3;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	132723	134102	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG00140_ch_T0000004;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000004;transcript_name=HG00140_ch_T0000004;gene_name=PLCXD1;ID=intron:HG00140_ch_T0000004:5;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	134103	134286	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG00140_ch_T0000004;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000004;transcript_name=HG00140_ch_T0000004;gene_name=PLCXD1;ID=exon:HG00140_ch_T0000004:6;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	134103	134286	.	+	0	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG00140_ch_T0000004;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000004;transcript_name=HG00140_ch_T0000004;gene_name=PLCXD1;ID=CDS:HG00140_ch_T0000004:4;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	134287	139527	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG00140_ch_T0000004;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000004;transcript_name=HG00140_ch_T0000004;gene_name=PLCXD1;ID=intron:HG00140_ch_T0000004:6;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	139528	143787	.	+	.	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG00140_ch_T0000004;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000004;transcript_name=HG00140_ch_T0000004;gene_name=PLCXD1;ID=exon:HG00140_ch_T0000004:7;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	139528	139766	.	+	2	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG00140_ch_T0000004;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000004;transcript_name=HG00140_ch_T0000004;gene_name=PLCXD1;ID=CDS:HG00140_ch_T0000004:5;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	139764	139766	.	+	0	source_transcript=ENST00000711184.1;source_transcript_name=PLCXD1-220;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711184.1,ENST00000711184.1;transcript_id=HG00140_ch_T0000004;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000004;transcript_name=HG00140_ch_T0000004;gene_name=PLCXD1;ID=stop_codon:HG00140_ch_T0000004;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	117345	132605	1000	+	.	source_transcript=ENST00000711183.1;source_transcript_name=PLCXD1-219;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711183.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711183.1,ENST00000711183.1;transcript_id=HG00140_ch_T0000005;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_G0000003;transcript_name=HG00140_ch_T0000005;gene_name=PLCXD1;ID=HG00140_ch_T0000005;Name=PLCXD1
HG00140_chrY	CAT	exon	117345	117415	.	+	.	source_transcript=ENST00000711183.1;source_transcript_name=PLCXD1-219;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711183.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711183.1,ENST00000711183.1;transcript_id=HG00140_ch_T0000005;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000005;transcript_name=HG00140_ch_T0000005;gene_name=PLCXD1;ID=exon:HG00140_ch_T0000005:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	117416	125244	.	+	.	source_transcript=ENST00000711183.1;source_transcript_name=PLCXD1-219;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711183.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711183.1,ENST00000711183.1;transcript_id=HG00140_ch_T0000005;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000005;transcript_name=HG00140_ch_T0000005;gene_name=PLCXD1;ID=intron:HG00140_ch_T0000005:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	125245	125392	.	+	.	source_transcript=ENST00000711183.1;source_transcript_name=PLCXD1-219;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711183.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711183.1,ENST00000711183.1;transcript_id=HG00140_ch_T0000005;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000005;transcript_name=HG00140_ch_T0000005;gene_name=PLCXD1;ID=exon:HG00140_ch_T0000005:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	125393	129800	.	+	.	source_transcript=ENST00000711183.1;source_transcript_name=PLCXD1-219;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711183.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711183.1,ENST00000711183.1;transcript_id=HG00140_ch_T0000005;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000005;transcript_name=HG00140_ch_T0000005;gene_name=PLCXD1;ID=intron:HG00140_ch_T0000005:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	129801	129937	.	+	.	source_transcript=ENST00000711183.1;source_transcript_name=PLCXD1-219;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711183.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711183.1,ENST00000711183.1;transcript_id=HG00140_ch_T0000005;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000005;transcript_name=HG00140_ch_T0000005;gene_name=PLCXD1;ID=exon:HG00140_ch_T0000005:2;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	129938	131715	.	+	.	source_transcript=ENST00000711183.1;source_transcript_name=PLCXD1-219;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711183.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711183.1,ENST00000711183.1;transcript_id=HG00140_ch_T0000005;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000005;transcript_name=HG00140_ch_T0000005;gene_name=PLCXD1;ID=intron:HG00140_ch_T0000005:2;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	131716	131860	.	+	.	source_transcript=ENST00000711183.1;source_transcript_name=PLCXD1-219;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711183.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711183.1,ENST00000711183.1;transcript_id=HG00140_ch_T0000005;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000005;transcript_name=HG00140_ch_T0000005;gene_name=PLCXD1;ID=exon:HG00140_ch_T0000005:3;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	131861	132566	.	+	.	source_transcript=ENST00000711183.1;source_transcript_name=PLCXD1-219;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711183.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711183.1,ENST00000711183.1;transcript_id=HG00140_ch_T0000005;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000005;transcript_name=HG00140_ch_T0000005;gene_name=PLCXD1;ID=intron:HG00140_ch_T0000005:3;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	132567	132605	.	+	.	source_transcript=ENST00000711183.1;source_transcript_name=PLCXD1-219;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711183.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711183.1,ENST00000711183.1;transcript_id=HG00140_ch_T0000005;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000005;transcript_name=HG00140_ch_T0000005;gene_name=PLCXD1;ID=exon:HG00140_ch_T0000005:4;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	117374	132697	100	+	.	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=HG00140_ch_T0000006;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_G0000003;transcript_name=HG00140_ch_T0000006;gene_name=PLCXD1;ID=HG00140_ch_T0000006;Name=PLCXD1
HG00140_chrY	CAT	exon	117374	117415	.	+	.	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=HG00140_ch_T0000006;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000006;transcript_name=HG00140_ch_T0000006;gene_name=PLCXD1;ID=exon:HG00140_ch_T0000006:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	117416	125244	.	+	.	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=HG00140_ch_T0000006;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000006;transcript_name=HG00140_ch_T0000006;gene_name=PLCXD1;ID=intron:HG00140_ch_T0000006:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	125245	125392	.	+	.	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=HG00140_ch_T0000006;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000006;transcript_name=HG00140_ch_T0000006;gene_name=PLCXD1;ID=exon:HG00140_ch_T0000006:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	125266	125392	.	+	0	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=HG00140_ch_T0000006;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000006;transcript_name=HG00140_ch_T0000006;gene_name=PLCXD1;ID=CDS:HG00140_ch_T0000006:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	125266	125268	.	+	0	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=HG00140_ch_T0000006;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000006;transcript_name=HG00140_ch_T0000006;gene_name=PLCXD1;ID=start_codon:HG00140_ch_T0000006;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	125393	129800	.	+	.	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=HG00140_ch_T0000006;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000006;transcript_name=HG00140_ch_T0000006;gene_name=PLCXD1;ID=intron:HG00140_ch_T0000006:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	129801	129937	.	+	.	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=HG00140_ch_T0000006;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000006;transcript_name=HG00140_ch_T0000006;gene_name=PLCXD1;ID=exon:HG00140_ch_T0000006:2;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	129801	129937	.	+	2	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=HG00140_ch_T0000006;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000006;transcript_name=HG00140_ch_T0000006;gene_name=PLCXD1;ID=CDS:HG00140_ch_T0000006:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	129938	131715	.	+	.	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=HG00140_ch_T0000006;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000006;transcript_name=HG00140_ch_T0000006;gene_name=PLCXD1;ID=intron:HG00140_ch_T0000006:2;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	131716	131844	.	+	.	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=HG00140_ch_T0000006;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000006;transcript_name=HG00140_ch_T0000006;gene_name=PLCXD1;ID=exon:HG00140_ch_T0000006:3;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	131716	131844	.	+	0	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=HG00140_ch_T0000006;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000006;transcript_name=HG00140_ch_T0000006;gene_name=PLCXD1;ID=CDS:HG00140_ch_T0000006:2;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	131845	132566	.	+	.	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=HG00140_ch_T0000006;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000006;transcript_name=HG00140_ch_T0000006;gene_name=PLCXD1;ID=intron:HG00140_ch_T0000006:3;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	132567	132697	.	+	.	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=HG00140_ch_T0000006;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000006;transcript_name=HG00140_ch_T0000006;gene_name=PLCXD1;ID=exon:HG00140_ch_T0000006:4;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	132567	132697	.	+	0	source_transcript=ENST00000711182.1;source_transcript_name=PLCXD1-218;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711182.1,ENST00000711182.1;transcript_id=HG00140_ch_T0000006;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000006;transcript_name=HG00140_ch_T0000006;gene_name=PLCXD1;ID=CDS:HG00140_ch_T0000006:3;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	122133	129937	100	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711181.1,ENST00000711181.1;transcript_id=HG00140_ch_T0000008;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_G0000003;transcript_name=HG00140_ch_T0000008;gene_name=PLCXD1;ID=HG00140_ch_T0000008;Name=PLCXD1
HG00140_chrY	CAT	exon	122133	122199	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711181.1,ENST00000711181.1;transcript_id=HG00140_ch_T0000008;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000008;transcript_name=HG00140_ch_T0000008;gene_name=PLCXD1;ID=exon:HG00140_ch_T0000008:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	122200	122559	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711181.1,ENST00000711181.1;transcript_id=HG00140_ch_T0000008;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000008;transcript_name=HG00140_ch_T0000008;gene_name=PLCXD1;ID=intron:HG00140_ch_T0000008:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	122560	122762	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711181.1,ENST00000711181.1;transcript_id=HG00140_ch_T0000008;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000008;transcript_name=HG00140_ch_T0000008;gene_name=PLCXD1;ID=exon:HG00140_ch_T0000008:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	122763	125244	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711181.1,ENST00000711181.1;transcript_id=HG00140_ch_T0000008;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000008;transcript_name=HG00140_ch_T0000008;gene_name=PLCXD1;ID=intron:HG00140_ch_T0000008:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	125245	125392	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711181.1,ENST00000711181.1;transcript_id=HG00140_ch_T0000008;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000008;transcript_name=HG00140_ch_T0000008;gene_name=PLCXD1;ID=exon:HG00140_ch_T0000008:2;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	125266	125392	.	+	0	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711181.1,ENST00000711181.1;transcript_id=HG00140_ch_T0000008;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000008;transcript_name=HG00140_ch_T0000008;gene_name=PLCXD1;ID=CDS:HG00140_ch_T0000008:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	125266	125268	.	+	0	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711181.1,ENST00000711181.1;transcript_id=HG00140_ch_T0000008;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000008;transcript_name=HG00140_ch_T0000008;gene_name=PLCXD1;ID=start_codon:HG00140_ch_T0000008;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	125393	129800	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711181.1,ENST00000711181.1;transcript_id=HG00140_ch_T0000008;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000008;transcript_name=HG00140_ch_T0000008;gene_name=PLCXD1;ID=intron:HG00140_ch_T0000008:2;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	129801	129937	.	+	.	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711181.1,ENST00000711181.1;transcript_id=HG00140_ch_T0000008;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000008;transcript_name=HG00140_ch_T0000008;gene_name=PLCXD1;ID=exon:HG00140_ch_T0000008:3;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	129801	129937	.	+	2	source_transcript=ENST00000711181.1;source_transcript_name=PLCXD1-217;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711181.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711181.1,ENST00000711181.1;transcript_id=HG00140_ch_T0000008;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000008;transcript_name=HG00140_ch_T0000008;gene_name=PLCXD1;ID=CDS:HG00140_ch_T0000008:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	122272	129855	100	+	.	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=HG00140_ch_T0000009;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_G0000003;transcript_name=HG00140_ch_T0000009;gene_name=PLCXD1;ID=HG00140_ch_T0000009;Name=PLCXD1
HG00140_chrY	CAT	exon	122272	122334	.	+	.	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=HG00140_ch_T0000009;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000009;transcript_name=HG00140_ch_T0000009;gene_name=PLCXD1;ID=exon:HG00140_ch_T0000009:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	122335	122559	.	+	.	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=HG00140_ch_T0000009;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000009;transcript_name=HG00140_ch_T0000009;gene_name=PLCXD1;ID=intron:HG00140_ch_T0000009:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	122560	122762	.	+	.	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=HG00140_ch_T0000009;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000009;transcript_name=HG00140_ch_T0000009;gene_name=PLCXD1;ID=exon:HG00140_ch_T0000009:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	122763	125244	.	+	.	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=HG00140_ch_T0000009;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000009;transcript_name=HG00140_ch_T0000009;gene_name=PLCXD1;ID=intron:HG00140_ch_T0000009:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	125245	125392	.	+	.	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=HG00140_ch_T0000009;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000009;transcript_name=HG00140_ch_T0000009;gene_name=PLCXD1;ID=exon:HG00140_ch_T0000009:2;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	125266	125392	.	+	0	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=HG00140_ch_T0000009;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000009;transcript_name=HG00140_ch_T0000009;gene_name=PLCXD1;ID=CDS:HG00140_ch_T0000009:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	125266	125268	.	+	0	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=HG00140_ch_T0000009;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000009;transcript_name=HG00140_ch_T0000009;gene_name=PLCXD1;ID=start_codon:HG00140_ch_T0000009;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	125393	129800	.	+	.	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=HG00140_ch_T0000009;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000009;transcript_name=HG00140_ch_T0000009;gene_name=PLCXD1;ID=intron:HG00140_ch_T0000009:2;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	129801	129855	.	+	.	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=HG00140_ch_T0000009;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000009;transcript_name=HG00140_ch_T0000009;gene_name=PLCXD1;ID=exon:HG00140_ch_T0000009:3;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	129801	129855	.	+	2	source_transcript=ENST00000711180.1;source_transcript_name=PLCXD1-216;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711180.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711180.1,ENST00000711180.1;transcript_id=HG00140_ch_T0000009;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000009;transcript_name=HG00140_ch_T0000009;gene_name=PLCXD1;ID=CDS:HG00140_ch_T0000009:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	122459	143790	100	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG00140_ch_T0000010;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_G0000003;transcript_name=HG00140_ch_T0000010;gene_name=PLCXD1;ID=HG00140_ch_T0000010;Name=PLCXD1
HG00140_chrY	CAT	exon	122459	122762	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG00140_ch_T0000010;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000010;transcript_name=HG00140_ch_T0000010;gene_name=PLCXD1;ID=exon:HG00140_ch_T0000010:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	122763	125244	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG00140_ch_T0000010;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000010;transcript_name=HG00140_ch_T0000010;gene_name=PLCXD1;ID=intron:HG00140_ch_T0000010:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	125245	125392	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG00140_ch_T0000010;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000010;transcript_name=HG00140_ch_T0000010;gene_name=PLCXD1;ID=exon:HG00140_ch_T0000010:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	125266	125392	.	+	0	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG00140_ch_T0000010;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000010;transcript_name=HG00140_ch_T0000010;gene_name=PLCXD1;ID=CDS:HG00140_ch_T0000010:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	125266	125268	.	+	0	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG00140_ch_T0000010;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000010;transcript_name=HG00140_ch_T0000010;gene_name=PLCXD1;ID=start_codon:HG00140_ch_T0000010;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	125393	129800	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG00140_ch_T0000010;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000010;transcript_name=HG00140_ch_T0000010;gene_name=PLCXD1;ID=intron:HG00140_ch_T0000010:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	129801	129937	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG00140_ch_T0000010;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000010;transcript_name=HG00140_ch_T0000010;gene_name=PLCXD1;ID=exon:HG00140_ch_T0000010:2;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	129801	129937	.	+	2	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG00140_ch_T0000010;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000010;transcript_name=HG00140_ch_T0000010;gene_name=PLCXD1;ID=CDS:HG00140_ch_T0000010:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	129938	131715	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG00140_ch_T0000010;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000010;transcript_name=HG00140_ch_T0000010;gene_name=PLCXD1;ID=intron:HG00140_ch_T0000010:2;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	131716	131844	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG00140_ch_T0000010;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000010;transcript_name=HG00140_ch_T0000010;gene_name=PLCXD1;ID=exon:HG00140_ch_T0000010:3;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	131716	131844	.	+	0	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG00140_ch_T0000010;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000010;transcript_name=HG00140_ch_T0000010;gene_name=PLCXD1;ID=CDS:HG00140_ch_T0000010:2;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	131845	132566	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG00140_ch_T0000010;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000010;transcript_name=HG00140_ch_T0000010;gene_name=PLCXD1;ID=intron:HG00140_ch_T0000010:3;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	132567	132722	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG00140_ch_T0000010;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000010;transcript_name=HG00140_ch_T0000010;gene_name=PLCXD1;ID=exon:HG00140_ch_T0000010:4;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	132567	132722	.	+	0	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG00140_ch_T0000010;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000010;transcript_name=HG00140_ch_T0000010;gene_name=PLCXD1;ID=CDS:HG00140_ch_T0000010:3;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	132723	134102	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG00140_ch_T0000010;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000010;transcript_name=HG00140_ch_T0000010;gene_name=PLCXD1;ID=intron:HG00140_ch_T0000010:4;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	134103	134286	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG00140_ch_T0000010;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000010;transcript_name=HG00140_ch_T0000010;gene_name=PLCXD1;ID=exon:HG00140_ch_T0000010:5;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	134103	134286	.	+	0	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG00140_ch_T0000010;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000010;transcript_name=HG00140_ch_T0000010;gene_name=PLCXD1;ID=CDS:HG00140_ch_T0000010:4;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	134287	139527	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG00140_ch_T0000010;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000010;transcript_name=HG00140_ch_T0000010;gene_name=PLCXD1;ID=intron:HG00140_ch_T0000010:5;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	139528	143790	.	+	.	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG00140_ch_T0000010;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000010;transcript_name=HG00140_ch_T0000010;gene_name=PLCXD1;ID=exon:HG00140_ch_T0000010:6;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	139528	139766	.	+	2	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG00140_ch_T0000010;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000010;transcript_name=HG00140_ch_T0000010;gene_name=PLCXD1;ID=CDS:HG00140_ch_T0000010:5;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	139764	139766	.	+	0	source_transcript=ENST00000711179.1;source_transcript_name=PLCXD1-215;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711179.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711179.1,ENST00000711179.1;transcript_id=HG00140_ch_T0000010;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000010;transcript_name=HG00140_ch_T0000010;gene_name=PLCXD1;ID=stop_codon:HG00140_ch_T0000010;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	124241	129897	100	+	.	source_transcript=ENST00000711177.1;source_transcript_name=PLCXD1-214;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711177.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711177.1,ENST00000711177.1;transcript_id=HG00140_ch_T0000011;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_G0000003;transcript_name=HG00140_ch_T0000011;gene_name=PLCXD1;ID=HG00140_ch_T0000011;Name=PLCXD1
HG00140_chrY	CAT	exon	124241	124279	.	+	.	source_transcript=ENST00000711177.1;source_transcript_name=PLCXD1-214;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711177.1,ENST00000711177.1;transcript_id=HG00140_ch_T0000011;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000011;transcript_name=HG00140_ch_T0000011;gene_name=PLCXD1;ID=exon:HG00140_ch_T0000011:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	124280	125244	.	+	.	source_transcript=ENST00000711177.1;source_transcript_name=PLCXD1-214;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711177.1,ENST00000711177.1;transcript_id=HG00140_ch_T0000011;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000011;transcript_name=HG00140_ch_T0000011;gene_name=PLCXD1;ID=intron:HG00140_ch_T0000011:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	125245	125392	.	+	.	source_transcript=ENST00000711177.1;source_transcript_name=PLCXD1-214;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711177.1,ENST00000711177.1;transcript_id=HG00140_ch_T0000011;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000011;transcript_name=HG00140_ch_T0000011;gene_name=PLCXD1;ID=exon:HG00140_ch_T0000011:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	125266	125392	.	+	0	source_transcript=ENST00000711177.1;source_transcript_name=PLCXD1-214;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711177.1,ENST00000711177.1;transcript_id=HG00140_ch_T0000011;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000011;transcript_name=HG00140_ch_T0000011;gene_name=PLCXD1;ID=CDS:HG00140_ch_T0000011:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	125266	125268	.	+	0	source_transcript=ENST00000711177.1;source_transcript_name=PLCXD1-214;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711177.1,ENST00000711177.1;transcript_id=HG00140_ch_T0000011;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000011;transcript_name=HG00140_ch_T0000011;gene_name=PLCXD1;ID=start_codon:HG00140_ch_T0000011;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	125393	129800	.	+	.	source_transcript=ENST00000711177.1;source_transcript_name=PLCXD1-214;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711177.1,ENST00000711177.1;transcript_id=HG00140_ch_T0000011;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000011;transcript_name=HG00140_ch_T0000011;gene_name=PLCXD1;ID=intron:HG00140_ch_T0000011:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	129801	129897	.	+	.	source_transcript=ENST00000711177.1;source_transcript_name=PLCXD1-214;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711177.1,ENST00000711177.1;transcript_id=HG00140_ch_T0000011;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000011;transcript_name=HG00140_ch_T0000011;gene_name=PLCXD1;ID=exon:HG00140_ch_T0000011:2;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	129801	129897	.	+	2	source_transcript=ENST00000711177.1;source_transcript_name=PLCXD1-214;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711177.1,ENST00000711177.1;transcript_id=HG00140_ch_T0000011;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000011;transcript_name=HG00140_ch_T0000011;gene_name=PLCXD1;ID=CDS:HG00140_ch_T0000011:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	124543	132707	100	+	.	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=HG00140_ch_T0000012;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_G0000003;transcript_name=HG00140_ch_T0000012;gene_name=PLCXD1;ID=HG00140_ch_T0000012;Name=PLCXD1
HG00140_chrY	CAT	exon	124543	124566	.	+	.	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=HG00140_ch_T0000012;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000012;transcript_name=HG00140_ch_T0000012;gene_name=PLCXD1;ID=exon:HG00140_ch_T0000012:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	124567	125244	.	+	.	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=HG00140_ch_T0000012;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000012;transcript_name=HG00140_ch_T0000012;gene_name=PLCXD1;ID=intron:HG00140_ch_T0000012:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	125245	125392	.	+	.	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=HG00140_ch_T0000012;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000012;transcript_name=HG00140_ch_T0000012;gene_name=PLCXD1;ID=exon:HG00140_ch_T0000012:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	125266	125392	.	+	0	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=HG00140_ch_T0000012;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000012;transcript_name=HG00140_ch_T0000012;gene_name=PLCXD1;ID=CDS:HG00140_ch_T0000012:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	125266	125268	.	+	0	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=HG00140_ch_T0000012;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000012;transcript_name=HG00140_ch_T0000012;gene_name=PLCXD1;ID=start_codon:HG00140_ch_T0000012;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	125393	129800	.	+	.	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=HG00140_ch_T0000012;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000012;transcript_name=HG00140_ch_T0000012;gene_name=PLCXD1;ID=intron:HG00140_ch_T0000012:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	129801	129937	.	+	.	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=HG00140_ch_T0000012;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000012;transcript_name=HG00140_ch_T0000012;gene_name=PLCXD1;ID=exon:HG00140_ch_T0000012:2;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	129801	129937	.	+	2	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=HG00140_ch_T0000012;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000012;transcript_name=HG00140_ch_T0000012;gene_name=PLCXD1;ID=CDS:HG00140_ch_T0000012:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	129938	131715	.	+	.	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=HG00140_ch_T0000012;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000012;transcript_name=HG00140_ch_T0000012;gene_name=PLCXD1;ID=intron:HG00140_ch_T0000012:2;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	131716	131844	.	+	.	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=HG00140_ch_T0000012;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000012;transcript_name=HG00140_ch_T0000012;gene_name=PLCXD1;ID=exon:HG00140_ch_T0000012:3;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	131716	131844	.	+	0	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=HG00140_ch_T0000012;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000012;transcript_name=HG00140_ch_T0000012;gene_name=PLCXD1;ID=CDS:HG00140_ch_T0000012:2;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	131845	132566	.	+	.	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=HG00140_ch_T0000012;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000012;transcript_name=HG00140_ch_T0000012;gene_name=PLCXD1;ID=intron:HG00140_ch_T0000012:3;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	132567	132707	.	+	.	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=HG00140_ch_T0000012;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000012;transcript_name=HG00140_ch_T0000012;gene_name=PLCXD1;ID=exon:HG00140_ch_T0000012:4;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	132567	132707	.	+	0	source_transcript=ENST00000711176.1;source_transcript_name=PLCXD1-213;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711176.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711176.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711176.1,ENST00000711176.1;transcript_id=HG00140_ch_T0000012;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000012;transcript_name=HG00140_ch_T0000012;gene_name=PLCXD1;ID=CDS:HG00140_ch_T0000012:3;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	124557	132697	100	+	.	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=HG00140_ch_T0000013;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_G0000003;transcript_name=HG00140_ch_T0000013;gene_name=PLCXD1;ID=HG00140_ch_T0000013;Name=PLCXD1
HG00140_chrY	CAT	exon	124557	124598	.	+	.	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=HG00140_ch_T0000013;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000013;transcript_name=HG00140_ch_T0000013;gene_name=PLCXD1;ID=exon:HG00140_ch_T0000013:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	124599	125244	.	+	.	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=HG00140_ch_T0000013;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000013;transcript_name=HG00140_ch_T0000013;gene_name=PLCXD1;ID=intron:HG00140_ch_T0000013:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	125245	125392	.	+	.	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=HG00140_ch_T0000013;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000013;transcript_name=HG00140_ch_T0000013;gene_name=PLCXD1;ID=exon:HG00140_ch_T0000013:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	125266	125392	.	+	0	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=HG00140_ch_T0000013;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000013;transcript_name=HG00140_ch_T0000013;gene_name=PLCXD1;ID=CDS:HG00140_ch_T0000013:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	125266	125268	.	+	0	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=HG00140_ch_T0000013;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000013;transcript_name=HG00140_ch_T0000013;gene_name=PLCXD1;ID=start_codon:HG00140_ch_T0000013;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	125393	129800	.	+	.	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=HG00140_ch_T0000013;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000013;transcript_name=HG00140_ch_T0000013;gene_name=PLCXD1;ID=intron:HG00140_ch_T0000013:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	129801	129937	.	+	.	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=HG00140_ch_T0000013;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000013;transcript_name=HG00140_ch_T0000013;gene_name=PLCXD1;ID=exon:HG00140_ch_T0000013:2;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	129801	129937	.	+	2	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=HG00140_ch_T0000013;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000013;transcript_name=HG00140_ch_T0000013;gene_name=PLCXD1;ID=CDS:HG00140_ch_T0000013:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	129938	131715	.	+	.	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=HG00140_ch_T0000013;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000013;transcript_name=HG00140_ch_T0000013;gene_name=PLCXD1;ID=intron:HG00140_ch_T0000013:2;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	131716	131844	.	+	.	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=HG00140_ch_T0000013;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000013;transcript_name=HG00140_ch_T0000013;gene_name=PLCXD1;ID=exon:HG00140_ch_T0000013:3;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	131716	131844	.	+	0	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=HG00140_ch_T0000013;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000013;transcript_name=HG00140_ch_T0000013;gene_name=PLCXD1;ID=CDS:HG00140_ch_T0000013:2;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	131845	132566	.	+	.	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=HG00140_ch_T0000013;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000013;transcript_name=HG00140_ch_T0000013;gene_name=PLCXD1;ID=intron:HG00140_ch_T0000013:3;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	132567	132697	.	+	.	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=HG00140_ch_T0000013;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000013;transcript_name=HG00140_ch_T0000013;gene_name=PLCXD1;ID=exon:HG00140_ch_T0000013:4;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	132567	132697	.	+	0	source_transcript=ENST00000711175.1;source_transcript_name=PLCXD1-212;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711175.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711175.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711175.1,ENST00000711175.1;transcript_id=HG00140_ch_T0000013;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000013;transcript_name=HG00140_ch_T0000013;gene_name=PLCXD1;ID=CDS:HG00140_ch_T0000013:3;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	124812	131825	100	+	.	source_transcript=ENST00000711174.1;source_transcript_name=PLCXD1-211;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711174.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711174.1,ENST00000711174.1;transcript_id=HG00140_ch_T0000014;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_G0000003;transcript_name=HG00140_ch_T0000014;gene_name=PLCXD1;ID=HG00140_ch_T0000014;Name=PLCXD1
HG00140_chrY	CAT	exon	124812	125392	.	+	.	source_transcript=ENST00000711174.1;source_transcript_name=PLCXD1-211;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711174.1,ENST00000711174.1;transcript_id=HG00140_ch_T0000014;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000014;transcript_name=HG00140_ch_T0000014;gene_name=PLCXD1;ID=exon:HG00140_ch_T0000014:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	125266	125392	.	+	0	source_transcript=ENST00000711174.1;source_transcript_name=PLCXD1-211;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711174.1,ENST00000711174.1;transcript_id=HG00140_ch_T0000014;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000014;transcript_name=HG00140_ch_T0000014;gene_name=PLCXD1;ID=CDS:HG00140_ch_T0000014:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	125266	125268	.	+	0	source_transcript=ENST00000711174.1;source_transcript_name=PLCXD1-211;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711174.1,ENST00000711174.1;transcript_id=HG00140_ch_T0000014;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000014;transcript_name=HG00140_ch_T0000014;gene_name=PLCXD1;ID=start_codon:HG00140_ch_T0000014;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	125393	129800	.	+	.	source_transcript=ENST00000711174.1;source_transcript_name=PLCXD1-211;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711174.1,ENST00000711174.1;transcript_id=HG00140_ch_T0000014;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000014;transcript_name=HG00140_ch_T0000014;gene_name=PLCXD1;ID=intron:HG00140_ch_T0000014:0;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	129801	129937	.	+	.	source_transcript=ENST00000711174.1;source_transcript_name=PLCXD1-211;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711174.1,ENST00000711174.1;transcript_id=HG00140_ch_T0000014;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000014;transcript_name=HG00140_ch_T0000014;gene_name=PLCXD1;ID=exon:HG00140_ch_T0000014:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	129801	129937	.	+	2	source_transcript=ENST00000711174.1;source_transcript_name=PLCXD1-211;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711174.1,ENST00000711174.1;transcript_id=HG00140_ch_T0000014;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000014;transcript_name=HG00140_ch_T0000014;gene_name=PLCXD1;ID=CDS:HG00140_ch_T0000014:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	129938	131715	.	+	.	source_transcript=ENST00000711174.1;source_transcript_name=PLCXD1-211;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711174.1,ENST00000711174.1;transcript_id=HG00140_ch_T0000014;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000014;transcript_name=HG00140_ch_T0000014;gene_name=PLCXD1;ID=intron:HG00140_ch_T0000014:1;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	131716	131825	.	+	.	source_transcript=ENST00000711174.1;source_transcript_name=PLCXD1-211;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711174.1,ENST00000711174.1;transcript_id=HG00140_ch_T0000014;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000014;transcript_name=HG00140_ch_T0000014;gene_name=PLCXD1;ID=exon:HG00140_ch_T0000014:2;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	131716	131825	.	+	0	source_transcript=ENST00000711174.1;source_transcript_name=PLCXD1-211;source_gene=ENSG00000292344.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292344.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711174.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=ENST00000711174.1,ENST00000711174.1;transcript_id=HG00140_ch_T0000014;gene_id=HG00140_ch_G0000003;Parent=HG00140_ch_T0000014;transcript_name=HG00140_ch_T0000014;gene_name=PLCXD1;ID=CDS:HG00140_ch_T0000014:2;Name=PLCXD1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	119967	122903	.	-	.	source_gene_common_name=ENSG00000310554;source_gene=ENSG00000310554.1;alternative_source_transcripts=ENST00000850733.1,ENST00000850733.1;gene_id=HG00140_ch_G0000004;gene_biotype=lncRNA;gene_name=ENSG00000310554;gene_sources=liftoff;ID=HG00140_ch_G0000004;Name=ENSG00000310554
HG00140_chrY	CAT	transcript	119967	122903	1000	-	.	source_transcript=ENST00000850733.1;source_transcript_name=ENST00000850733;source_gene=ENSG00000310554.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310554.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850733.1;transcript_score=299.486;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310554;alternative_source_transcripts=ENST00000850733.1,ENST00000850733.1;transcript_id=HG00140_ch_T0000007;gene_id=HG00140_ch_G0000004;Parent=HG00140_ch_G0000004;transcript_name=HG00140_ch_T0000007;gene_name=ENSG00000310554;ID=HG00140_ch_T0000007;Name=ENSG00000310554
HG00140_chrY	CAT	exon	119967	120790	.	-	.	source_transcript=ENST00000850733.1;source_transcript_name=ENST00000850733;source_gene=ENSG00000310554.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310554.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850733.1;transcript_score=299.486;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310554;alternative_source_transcripts=ENST00000850733.1,ENST00000850733.1;transcript_id=HG00140_ch_T0000007;gene_id=HG00140_ch_G0000004;Parent=HG00140_ch_T0000007;transcript_name=HG00140_ch_T0000007;gene_name=ENSG00000310554;ID=exon:HG00140_ch_T0000007:0;Name=ENSG00000310554;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	120791	122563	.	-	.	source_transcript=ENST00000850733.1;source_transcript_name=ENST00000850733;source_gene=ENSG00000310554.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310554.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850733.1;transcript_score=299.486;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310554;alternative_source_transcripts=ENST00000850733.1,ENST00000850733.1;transcript_id=HG00140_ch_T0000007;gene_id=HG00140_ch_G0000004;Parent=HG00140_ch_T0000007;transcript_name=HG00140_ch_T0000007;gene_name=ENSG00000310554;ID=intron:HG00140_ch_T0000007:0;Name=ENSG00000310554;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	122564	122903	.	-	.	source_transcript=ENST00000850733.1;source_transcript_name=ENST00000850733;source_gene=ENSG00000310554.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310554.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850733.1;transcript_score=299.486;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310554;alternative_source_transcripts=ENST00000850733.1,ENST00000850733.1;transcript_id=HG00140_ch_T0000007;gene_id=HG00140_ch_G0000004;Parent=HG00140_ch_T0000007;transcript_name=HG00140_ch_T0000007;gene_name=ENSG00000310554;ID=exon:HG00140_ch_T0000007:1;Name=ENSG00000310554;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	143780	160916	.	-	.	source_gene_common_name=GTPBP6;source_gene=ENSG00000292358.2;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;gene_id=HG00140_ch_G0000005;gene_biotype=protein_coding;gene_name=GTPBP6;gene_sources=liftoff;ID=HG00140_ch_G0000005;Name=GTPBP6
HG00140_chrY	CAT	transcript	143780	160916	100	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00140_ch_T0000015;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_G0000005;transcript_name=HG00140_ch_T0000015;gene_name=GTPBP6;ID=HG00140_ch_T0000015;Name=GTPBP6
HG00140_chrY	CAT	exon	143780	145631	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00140_ch_T0000015;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000015;transcript_name=HG00140_ch_T0000015;gene_name=GTPBP6;ID=exon:HG00140_ch_T0000015:0;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	145508	145631	.	-	1	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00140_ch_T0000015;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000015;transcript_name=HG00140_ch_T0000015;gene_name=GTPBP6;ID=CDS:HG00140_ch_T0000015:0;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	145508	145510	.	-	0	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00140_ch_T0000015;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000015;transcript_name=HG00140_ch_T0000015;gene_name=GTPBP6;ID=stop_codon:HG00140_ch_T0000015;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	145632	147793	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00140_ch_T0000015;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000015;transcript_name=HG00140_ch_T0000015;gene_name=GTPBP6;ID=intron:HG00140_ch_T0000015:0;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	147794	147946	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00140_ch_T0000015;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000015;transcript_name=HG00140_ch_T0000015;gene_name=GTPBP6;ID=exon:HG00140_ch_T0000015:1;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	147794	147946	.	-	1	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00140_ch_T0000015;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000015;transcript_name=HG00140_ch_T0000015;gene_name=GTPBP6;ID=CDS:HG00140_ch_T0000015:1;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	147947	148165	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00140_ch_T0000015;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000015;transcript_name=HG00140_ch_T0000015;gene_name=GTPBP6;ID=intron:HG00140_ch_T0000015:1;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	148166	148314	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00140_ch_T0000015;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000015;transcript_name=HG00140_ch_T0000015;gene_name=GTPBP6;ID=exon:HG00140_ch_T0000015:2;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	148166	148314	.	-	0	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00140_ch_T0000015;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000015;transcript_name=HG00140_ch_T0000015;gene_name=GTPBP6;ID=CDS:HG00140_ch_T0000015:2;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	148315	151852	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00140_ch_T0000015;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000015;transcript_name=HG00140_ch_T0000015;gene_name=GTPBP6;ID=intron:HG00140_ch_T0000015:2;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	151853	152061	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00140_ch_T0000015;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000015;transcript_name=HG00140_ch_T0000015;gene_name=GTPBP6;ID=exon:HG00140_ch_T0000015:3;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	151853	152061	.	-	2	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00140_ch_T0000015;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000015;transcript_name=HG00140_ch_T0000015;gene_name=GTPBP6;ID=CDS:HG00140_ch_T0000015:3;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	152062	153199	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00140_ch_T0000015;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000015;transcript_name=HG00140_ch_T0000015;gene_name=GTPBP6;ID=intron:HG00140_ch_T0000015:3;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	153200	153358	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00140_ch_T0000015;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000015;transcript_name=HG00140_ch_T0000015;gene_name=GTPBP6;ID=exon:HG00140_ch_T0000015:4;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	153200	153358	.	-	2	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00140_ch_T0000015;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000015;transcript_name=HG00140_ch_T0000015;gene_name=GTPBP6;ID=CDS:HG00140_ch_T0000015:4;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	153359	154663	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00140_ch_T0000015;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000015;transcript_name=HG00140_ch_T0000015;gene_name=GTPBP6;ID=intron:HG00140_ch_T0000015:4;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	154664	154731	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00140_ch_T0000015;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000015;transcript_name=HG00140_ch_T0000015;gene_name=GTPBP6;ID=exon:HG00140_ch_T0000015:5;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	154664	154731	.	-	1	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00140_ch_T0000015;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000015;transcript_name=HG00140_ch_T0000015;gene_name=GTPBP6;ID=CDS:HG00140_ch_T0000015:5;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	154732	155403	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00140_ch_T0000015;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000015;transcript_name=HG00140_ch_T0000015;gene_name=GTPBP6;ID=intron:HG00140_ch_T0000015:5;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	155404	155534	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00140_ch_T0000015;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000015;transcript_name=HG00140_ch_T0000015;gene_name=GTPBP6;ID=exon:HG00140_ch_T0000015:6;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	155404	155534	.	-	0	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00140_ch_T0000015;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000015;transcript_name=HG00140_ch_T0000015;gene_name=GTPBP6;ID=CDS:HG00140_ch_T0000015:6;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	155535	155739	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00140_ch_T0000015;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000015;transcript_name=HG00140_ch_T0000015;gene_name=GTPBP6;ID=intron:HG00140_ch_T0000015:6;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	155740	155810	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00140_ch_T0000015;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000015;transcript_name=HG00140_ch_T0000015;gene_name=GTPBP6;ID=exon:HG00140_ch_T0000015:7;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	155740	155810	.	-	2	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00140_ch_T0000015;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000015;transcript_name=HG00140_ch_T0000015;gene_name=GTPBP6;ID=CDS:HG00140_ch_T0000015:7;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	155811	159032	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00140_ch_T0000015;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000015;transcript_name=HG00140_ch_T0000015;gene_name=GTPBP6;ID=intron:HG00140_ch_T0000015:7;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	159033	159170	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00140_ch_T0000015;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000015;transcript_name=HG00140_ch_T0000015;gene_name=GTPBP6;ID=exon:HG00140_ch_T0000015:8;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	159033	159170	.	-	2	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00140_ch_T0000015;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000015;transcript_name=HG00140_ch_T0000015;gene_name=GTPBP6;ID=CDS:HG00140_ch_T0000015:8;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	159171	160556	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00140_ch_T0000015;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000015;transcript_name=HG00140_ch_T0000015;gene_name=GTPBP6;ID=intron:HG00140_ch_T0000015:8;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	160557	160916	.	-	.	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00140_ch_T0000015;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000015;transcript_name=HG00140_ch_T0000015;gene_name=GTPBP6;ID=exon:HG00140_ch_T0000015:9;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	160557	160905	.	-	0	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00140_ch_T0000015;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000015;transcript_name=HG00140_ch_T0000015;gene_name=GTPBP6;ID=CDS:HG00140_ch_T0000015:9;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	160903	160905	.	-	0	source_transcript=ENST00000850822.1;source_transcript_name=GTPBP6-206;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850822.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000850822.1,ENST00000850822.1;transcript_id=HG00140_ch_T0000015;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000015;transcript_name=HG00140_ch_T0000015;gene_name=GTPBP6;ID=start_codon:HG00140_ch_T0000015;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	144963	152897	1000	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711232.1;transcript_score=299.802;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711232.1,ENST00000711232.1;transcript_id=HG00140_ch_T0000016;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_G0000005;transcript_name=HG00140_ch_T0000016;gene_name=GTPBP6;ID=HG00140_ch_T0000016;Name=GTPBP6
HG00140_chrY	CAT	exon	144963	145631	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711232.1;transcript_score=299.802;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711232.1,ENST00000711232.1;transcript_id=HG00140_ch_T0000016;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000016;transcript_name=HG00140_ch_T0000016;gene_name=GTPBP6;ID=exon:HG00140_ch_T0000016:0;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	145632	147793	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711232.1;transcript_score=299.802;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711232.1,ENST00000711232.1;transcript_id=HG00140_ch_T0000016;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000016;transcript_name=HG00140_ch_T0000016;gene_name=GTPBP6;ID=intron:HG00140_ch_T0000016:0;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	147794	147946	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711232.1;transcript_score=299.802;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711232.1,ENST00000711232.1;transcript_id=HG00140_ch_T0000016;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000016;transcript_name=HG00140_ch_T0000016;gene_name=GTPBP6;ID=exon:HG00140_ch_T0000016:1;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	147947	148165	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711232.1;transcript_score=299.802;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711232.1,ENST00000711232.1;transcript_id=HG00140_ch_T0000016;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000016;transcript_name=HG00140_ch_T0000016;gene_name=GTPBP6;ID=intron:HG00140_ch_T0000016:1;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	148166	148314	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711232.1;transcript_score=299.802;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711232.1,ENST00000711232.1;transcript_id=HG00140_ch_T0000016;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000016;transcript_name=HG00140_ch_T0000016;gene_name=GTPBP6;ID=exon:HG00140_ch_T0000016:2;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	148315	151852	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711232.1;transcript_score=299.802;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711232.1,ENST00000711232.1;transcript_id=HG00140_ch_T0000016;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000016;transcript_name=HG00140_ch_T0000016;gene_name=GTPBP6;ID=intron:HG00140_ch_T0000016:2;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	151853	152897	.	-	.	source_transcript=ENST00000711232.1;source_transcript_name=GTPBP6-204;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711232.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711232.1;transcript_score=299.802;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711232.1,ENST00000711232.1;transcript_id=HG00140_ch_T0000016;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000016;transcript_name=HG00140_ch_T0000016;gene_name=GTPBP6;ID=exon:HG00140_ch_T0000016:3;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	145193	160914	100	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00140_ch_T0000017;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_G0000005;transcript_name=HG00140_ch_T0000017;gene_name=GTPBP6;ID=HG00140_ch_T0000017;Name=GTPBP6
HG00140_chrY	CAT	exon	145193	145631	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00140_ch_T0000017;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000017;transcript_name=HG00140_ch_T0000017;gene_name=GTPBP6;ID=exon:HG00140_ch_T0000017:0;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	145508	145631	.	-	1	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00140_ch_T0000017;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000017;transcript_name=HG00140_ch_T0000017;gene_name=GTPBP6;ID=CDS:HG00140_ch_T0000017:0;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	145508	145510	.	-	0	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00140_ch_T0000017;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000017;transcript_name=HG00140_ch_T0000017;gene_name=GTPBP6;ID=stop_codon:HG00140_ch_T0000017;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	145632	147793	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00140_ch_T0000017;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000017;transcript_name=HG00140_ch_T0000017;gene_name=GTPBP6;ID=intron:HG00140_ch_T0000017:0;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	147794	147946	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00140_ch_T0000017;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000017;transcript_name=HG00140_ch_T0000017;gene_name=GTPBP6;ID=exon:HG00140_ch_T0000017:1;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	147794	147946	.	-	1	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00140_ch_T0000017;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000017;transcript_name=HG00140_ch_T0000017;gene_name=GTPBP6;ID=CDS:HG00140_ch_T0000017:1;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	147947	148165	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00140_ch_T0000017;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000017;transcript_name=HG00140_ch_T0000017;gene_name=GTPBP6;ID=intron:HG00140_ch_T0000017:1;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	148166	148314	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00140_ch_T0000017;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000017;transcript_name=HG00140_ch_T0000017;gene_name=GTPBP6;ID=exon:HG00140_ch_T0000017:2;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	148166	148314	.	-	0	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00140_ch_T0000017;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000017;transcript_name=HG00140_ch_T0000017;gene_name=GTPBP6;ID=CDS:HG00140_ch_T0000017:2;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	148315	151852	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00140_ch_T0000017;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000017;transcript_name=HG00140_ch_T0000017;gene_name=GTPBP6;ID=intron:HG00140_ch_T0000017:2;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	151853	152061	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00140_ch_T0000017;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000017;transcript_name=HG00140_ch_T0000017;gene_name=GTPBP6;ID=exon:HG00140_ch_T0000017:3;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	151853	152061	.	-	2	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00140_ch_T0000017;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000017;transcript_name=HG00140_ch_T0000017;gene_name=GTPBP6;ID=CDS:HG00140_ch_T0000017:3;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	152062	153199	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00140_ch_T0000017;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000017;transcript_name=HG00140_ch_T0000017;gene_name=GTPBP6;ID=intron:HG00140_ch_T0000017:3;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	153200	153358	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00140_ch_T0000017;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000017;transcript_name=HG00140_ch_T0000017;gene_name=GTPBP6;ID=exon:HG00140_ch_T0000017:4;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	153200	153358	.	-	2	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00140_ch_T0000017;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000017;transcript_name=HG00140_ch_T0000017;gene_name=GTPBP6;ID=CDS:HG00140_ch_T0000017:4;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	153359	154663	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00140_ch_T0000017;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000017;transcript_name=HG00140_ch_T0000017;gene_name=GTPBP6;ID=intron:HG00140_ch_T0000017:4;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	154664	154731	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00140_ch_T0000017;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000017;transcript_name=HG00140_ch_T0000017;gene_name=GTPBP6;ID=exon:HG00140_ch_T0000017:5;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	154664	154731	.	-	1	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00140_ch_T0000017;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000017;transcript_name=HG00140_ch_T0000017;gene_name=GTPBP6;ID=CDS:HG00140_ch_T0000017:5;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	154732	155403	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00140_ch_T0000017;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000017;transcript_name=HG00140_ch_T0000017;gene_name=GTPBP6;ID=intron:HG00140_ch_T0000017:5;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	155404	155534	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00140_ch_T0000017;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000017;transcript_name=HG00140_ch_T0000017;gene_name=GTPBP6;ID=exon:HG00140_ch_T0000017:6;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	155404	155534	.	-	0	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00140_ch_T0000017;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000017;transcript_name=HG00140_ch_T0000017;gene_name=GTPBP6;ID=CDS:HG00140_ch_T0000017:6;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	155535	155739	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00140_ch_T0000017;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000017;transcript_name=HG00140_ch_T0000017;gene_name=GTPBP6;ID=intron:HG00140_ch_T0000017:6;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	155740	155810	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00140_ch_T0000017;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000017;transcript_name=HG00140_ch_T0000017;gene_name=GTPBP6;ID=exon:HG00140_ch_T0000017:7;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	155740	155810	.	-	2	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00140_ch_T0000017;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000017;transcript_name=HG00140_ch_T0000017;gene_name=GTPBP6;ID=CDS:HG00140_ch_T0000017:7;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	155811	159032	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00140_ch_T0000017;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000017;transcript_name=HG00140_ch_T0000017;gene_name=GTPBP6;ID=intron:HG00140_ch_T0000017:7;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	159033	159170	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00140_ch_T0000017;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000017;transcript_name=HG00140_ch_T0000017;gene_name=GTPBP6;ID=exon:HG00140_ch_T0000017:8;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	159033	159170	.	-	2	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00140_ch_T0000017;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000017;transcript_name=HG00140_ch_T0000017;gene_name=GTPBP6;ID=CDS:HG00140_ch_T0000017:8;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	159171	160556	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00140_ch_T0000017;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000017;transcript_name=HG00140_ch_T0000017;gene_name=GTPBP6;ID=intron:HG00140_ch_T0000017:8;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	160557	160914	.	-	.	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00140_ch_T0000017;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000017;transcript_name=HG00140_ch_T0000017;gene_name=GTPBP6;ID=exon:HG00140_ch_T0000017:9;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	160557	160905	.	-	0	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00140_ch_T0000017;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000017;transcript_name=HG00140_ch_T0000017;gene_name=GTPBP6;ID=CDS:HG00140_ch_T0000017:9;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	160903	160905	.	-	0	source_transcript=ENST00000711233.1;source_transcript_name=GTPBP6-205;source_gene=ENSG00000292358.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292358.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711233.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711233.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=ENST00000711233.1,ENST00000711233.1;transcript_id=HG00140_ch_T0000017;gene_id=HG00140_ch_G0000005;Parent=HG00140_ch_T0000017;transcript_name=HG00140_ch_T0000017;gene_name=GTPBP6;ID=start_codon:HG00140_ch_T0000017;Name=GTPBP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	163105	163969	.	+	.	source_gene_common_name=LINC00685;source_gene=ENSG00000292342.1;gene_id=HG00140_ch_G0000006;gene_biotype=lncRNA;gene_name=LINC00685;gene_sources=liftoff,transMap;ID=HG00140_ch_G0000006;Name=LINC00685
HG00140_chrY	CAT	transcript	163105	163827	1000	+	.	source_transcript=ENST00000711187.1;source_transcript_name=LINC00685-203;source_gene=ENSG00000292342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711187.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711187.1;transcript_score=260.28;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;transcript_id=HG00140_ch_T0000018;gene_id=HG00140_ch_G0000006;Parent=HG00140_ch_G0000006;transcript_name=HG00140_ch_T0000018;gene_name=LINC00685;ID=HG00140_ch_T0000018;Name=LINC00685
HG00140_chrY	CAT	exon	163105	163363	.	+	.	source_transcript=ENST00000711187.1;source_transcript_name=LINC00685-203;source_gene=ENSG00000292342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711187.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711187.1;transcript_score=260.28;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;transcript_id=HG00140_ch_T0000018;gene_id=HG00140_ch_G0000006;Parent=HG00140_ch_T0000018;transcript_name=HG00140_ch_T0000018;gene_name=LINC00685;ID=exon:HG00140_ch_T0000018:0;Name=LINC00685;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	163364	163743	.	+	.	source_transcript=ENST00000711187.1;source_transcript_name=LINC00685-203;source_gene=ENSG00000292342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711187.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711187.1;transcript_score=260.28;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;transcript_id=HG00140_ch_T0000018;gene_id=HG00140_ch_G0000006;Parent=HG00140_ch_T0000018;transcript_name=HG00140_ch_T0000018;gene_name=LINC00685;ID=intron:HG00140_ch_T0000018:0;Name=LINC00685;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	163744	163827	.	+	.	source_transcript=ENST00000711187.1;source_transcript_name=LINC00685-203;source_gene=ENSG00000292342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711187.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711187.1;transcript_score=260.28;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;transcript_id=HG00140_ch_T0000018;gene_id=HG00140_ch_G0000006;Parent=HG00140_ch_T0000018;transcript_name=HG00140_ch_T0000018;gene_name=LINC00685;ID=exon:HG00140_ch_T0000018:1;Name=LINC00685;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	163105	163969	1000	+	.	source_transcript=ENST00000711187.1;source_transcript_name=LINC00685-203;source_gene=ENSG00000292342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711187.1;transcript_score=260.28;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;alternative_source_transcripts=ENST00000711187.1;transcript_id=HG00140_ch_T0000019;gene_id=HG00140_ch_G0000006;Parent=HG00140_ch_G0000006;transcript_name=HG00140_ch_T0000019;gene_name=LINC00685;ID=HG00140_ch_T0000019;Name=LINC00685
HG00140_chrY	CAT	exon	163105	163363	.	+	.	source_transcript=ENST00000711187.1;source_transcript_name=LINC00685-203;source_gene=ENSG00000292342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711187.1;transcript_score=260.28;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;alternative_source_transcripts=ENST00000711187.1;transcript_id=HG00140_ch_T0000019;gene_id=HG00140_ch_G0000006;Parent=HG00140_ch_T0000019;transcript_name=HG00140_ch_T0000019;gene_name=LINC00685;ID=exon:HG00140_ch_T0000019:0;Name=LINC00685;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	163364	163798	.	+	.	source_transcript=ENST00000711187.1;source_transcript_name=LINC00685-203;source_gene=ENSG00000292342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711187.1;transcript_score=260.28;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;alternative_source_transcripts=ENST00000711187.1;transcript_id=HG00140_ch_T0000019;gene_id=HG00140_ch_G0000006;Parent=HG00140_ch_T0000019;transcript_name=HG00140_ch_T0000019;gene_name=LINC00685;ID=intron:HG00140_ch_T0000019:0;Name=LINC00685;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	163799	163969	.	+	.	source_transcript=ENST00000711187.1;source_transcript_name=LINC00685-203;source_gene=ENSG00000292342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711187.1;transcript_score=260.28;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;alternative_source_transcripts=ENST00000711187.1;transcript_id=HG00140_ch_T0000019;gene_id=HG00140_ch_G0000006;Parent=HG00140_ch_T0000019;transcript_name=HG00140_ch_T0000019;gene_name=LINC00685;ID=exon:HG00140_ch_T0000019:1;Name=LINC00685;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	179749	231467	.	-	.	source_gene_common_name=PPP2R3B;source_gene=ENSG00000292327.1;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;gene_id=HG00140_ch_G0000007;gene_biotype=protein_coding;gene_name=PPP2R3B;gene_sources=liftoff,transMap;ID=HG00140_ch_G0000007;Name=PPP2R3B
HG00140_chrY	CAT	transcript	179749	231419	100	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00140_ch_T0000020;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_G0000007;transcript_name=HG00140_ch_T0000020;gene_name=PPP2R3B;ID=HG00140_ch_T0000020;Name=PPP2R3B
HG00140_chrY	CAT	exon	179749	180333	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00140_ch_T0000020;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000020;transcript_name=HG00140_ch_T0000020;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000020:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	180183	180333	.	-	1	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00140_ch_T0000020;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000020;transcript_name=HG00140_ch_T0000020;gene_name=PPP2R3B;ID=CDS:HG00140_ch_T0000020:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	180183	180185	.	-	0	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00140_ch_T0000020;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000020;transcript_name=HG00140_ch_T0000020;gene_name=PPP2R3B;ID=stop_codon:HG00140_ch_T0000020;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	180334	184402	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00140_ch_T0000020;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000020;transcript_name=HG00140_ch_T0000020;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000020:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	184403	184509	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00140_ch_T0000020;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000020;transcript_name=HG00140_ch_T0000020;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000020:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	184403	184509	.	-	0	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00140_ch_T0000020;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000020;transcript_name=HG00140_ch_T0000020;gene_name=PPP2R3B;ID=CDS:HG00140_ch_T0000020:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	184510	184576	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00140_ch_T0000020;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000020;transcript_name=HG00140_ch_T0000020;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000020:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	184577	184695	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00140_ch_T0000020;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000020;transcript_name=HG00140_ch_T0000020;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000020:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	184577	184695	.	-	2	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00140_ch_T0000020;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000020;transcript_name=HG00140_ch_T0000020;gene_name=PPP2R3B;ID=CDS:HG00140_ch_T0000020:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	184696	186473	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00140_ch_T0000020;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000020;transcript_name=HG00140_ch_T0000020;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000020:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	186474	186649	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00140_ch_T0000020;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000020;transcript_name=HG00140_ch_T0000020;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000020:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	186474	186649	.	-	1	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00140_ch_T0000020;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000020;transcript_name=HG00140_ch_T0000020;gene_name=PPP2R3B;ID=CDS:HG00140_ch_T0000020:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	186650	186976	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00140_ch_T0000020;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000020;transcript_name=HG00140_ch_T0000020;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000020:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	186977	187066	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00140_ch_T0000020;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000020;transcript_name=HG00140_ch_T0000020;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000020:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	186977	187066	.	-	1	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00140_ch_T0000020;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000020;transcript_name=HG00140_ch_T0000020;gene_name=PPP2R3B;ID=CDS:HG00140_ch_T0000020:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	187067	187550	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00140_ch_T0000020;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000020;transcript_name=HG00140_ch_T0000020;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000020:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	187551	187599	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00140_ch_T0000020;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000020;transcript_name=HG00140_ch_T0000020;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000020:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	187551	187599	.	-	2	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00140_ch_T0000020;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000020;transcript_name=HG00140_ch_T0000020;gene_name=PPP2R3B;ID=CDS:HG00140_ch_T0000020:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	187600	190047	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00140_ch_T0000020;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000020;transcript_name=HG00140_ch_T0000020;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000020:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	190048	190204	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00140_ch_T0000020;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000020;transcript_name=HG00140_ch_T0000020;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000020:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	190048	190204	.	-	0	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00140_ch_T0000020;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000020;transcript_name=HG00140_ch_T0000020;gene_name=PPP2R3B;ID=CDS:HG00140_ch_T0000020:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	190205	190711	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00140_ch_T0000020;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000020;transcript_name=HG00140_ch_T0000020;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000020:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	190712	190798	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00140_ch_T0000020;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000020;transcript_name=HG00140_ch_T0000020;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000020:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	190712	190798	.	-	0	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00140_ch_T0000020;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000020;transcript_name=HG00140_ch_T0000020;gene_name=PPP2R3B;ID=CDS:HG00140_ch_T0000020:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	190799	191238	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00140_ch_T0000020;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000020;transcript_name=HG00140_ch_T0000020;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000020:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	191239	191313	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00140_ch_T0000020;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000020;transcript_name=HG00140_ch_T0000020;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000020:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	191239	191313	.	-	0	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00140_ch_T0000020;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000020;transcript_name=HG00140_ch_T0000020;gene_name=PPP2R3B;ID=CDS:HG00140_ch_T0000020:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	191314	191739	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00140_ch_T0000020;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000020;transcript_name=HG00140_ch_T0000020;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000020:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	191740	191842	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00140_ch_T0000020;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000020;transcript_name=HG00140_ch_T0000020;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000020:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	191740	191842	.	-	1	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00140_ch_T0000020;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000020;transcript_name=HG00140_ch_T0000020;gene_name=PPP2R3B;ID=CDS:HG00140_ch_T0000020:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	191843	192095	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00140_ch_T0000020;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000020;transcript_name=HG00140_ch_T0000020;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000020:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	192096	192199	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00140_ch_T0000020;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000020;transcript_name=HG00140_ch_T0000020;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000020:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	192096	192199	.	-	0	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00140_ch_T0000020;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000020;transcript_name=HG00140_ch_T0000020;gene_name=PPP2R3B;ID=CDS:HG00140_ch_T0000020:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	192200	205894	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00140_ch_T0000020;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000020;transcript_name=HG00140_ch_T0000020;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000020:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	205895	206080	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00140_ch_T0000020;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000020;transcript_name=HG00140_ch_T0000020;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000020:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	205895	206080	.	-	0	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00140_ch_T0000020;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000020;transcript_name=HG00140_ch_T0000020;gene_name=PPP2R3B;ID=CDS:HG00140_ch_T0000020:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	206081	230879	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00140_ch_T0000020;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000020;transcript_name=HG00140_ch_T0000020;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000020:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	230880	231419	.	-	.	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00140_ch_T0000020;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000020;transcript_name=HG00140_ch_T0000020;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000020:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	230880	231203	.	-	0	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00140_ch_T0000020;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000020;transcript_name=HG00140_ch_T0000020;gene_name=PPP2R3B;ID=CDS:HG00140_ch_T0000020:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	231201	231203	.	-	0	source_transcript=ENST00000711115.1;source_transcript_name=PPP2R3B-234;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711115.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711115.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711115.1,ENST00000711115.1;transcript_id=HG00140_ch_T0000020;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000020;transcript_name=HG00140_ch_T0000020;gene_name=PPP2R3B;ID=start_codon:HG00140_ch_T0000020;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	180051	187381	1000	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711114.1;transcript_score=299.358;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711114.1;transcript_id=HG00140_ch_T0000021;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_G0000007;transcript_name=HG00140_ch_T0000021;gene_name=PPP2R3B;ID=HG00140_ch_T0000021;Name=PPP2R3B
HG00140_chrY	CAT	exon	180051	180333	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711114.1;transcript_score=299.358;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711114.1;transcript_id=HG00140_ch_T0000021;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000021;transcript_name=HG00140_ch_T0000021;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000021:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	180334	184402	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711114.1;transcript_score=299.358;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711114.1;transcript_id=HG00140_ch_T0000021;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000021;transcript_name=HG00140_ch_T0000021;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000021:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	184403	184695	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711114.1;transcript_score=299.358;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711114.1;transcript_id=HG00140_ch_T0000021;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000021;transcript_name=HG00140_ch_T0000021;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000021:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	184696	186473	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711114.1;transcript_score=299.358;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711114.1;transcript_id=HG00140_ch_T0000021;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000021;transcript_name=HG00140_ch_T0000021;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000021:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	186474	186649	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711114.1;transcript_score=299.358;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711114.1;transcript_id=HG00140_ch_T0000021;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000021;transcript_name=HG00140_ch_T0000021;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000021:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	186650	186976	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711114.1;transcript_score=299.358;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711114.1;transcript_id=HG00140_ch_T0000021;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000021;transcript_name=HG00140_ch_T0000021;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000021:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	186977	187381	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711114.1;transcript_score=299.358;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711114.1;transcript_id=HG00140_ch_T0000021;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000021;transcript_name=HG00140_ch_T0000021;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000021:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	180051	187381	1000	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711114.1;transcript_score=299.358;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00140_ch_T0000022;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_G0000007;transcript_name=HG00140_ch_T0000022;gene_name=PPP2R3B;ID=HG00140_ch_T0000022;Name=PPP2R3B
HG00140_chrY	CAT	exon	180051	180333	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711114.1;transcript_score=299.358;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00140_ch_T0000022;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000022;transcript_name=HG00140_ch_T0000022;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000022:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	180334	184402	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711114.1;transcript_score=299.358;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00140_ch_T0000022;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000022;transcript_name=HG00140_ch_T0000022;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000022:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	184403	184509	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711114.1;transcript_score=299.358;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00140_ch_T0000022;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000022;transcript_name=HG00140_ch_T0000022;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000022:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	184510	184576	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711114.1;transcript_score=299.358;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00140_ch_T0000022;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000022;transcript_name=HG00140_ch_T0000022;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000022:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	184577	184695	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711114.1;transcript_score=299.358;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00140_ch_T0000022;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000022;transcript_name=HG00140_ch_T0000022;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000022:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	184696	186473	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711114.1;transcript_score=299.358;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00140_ch_T0000022;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000022;transcript_name=HG00140_ch_T0000022;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000022:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	186474	186649	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711114.1;transcript_score=299.358;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00140_ch_T0000022;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000022;transcript_name=HG00140_ch_T0000022;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000022:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	186650	186976	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711114.1;transcript_score=299.358;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00140_ch_T0000022;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000022;transcript_name=HG00140_ch_T0000022;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000022:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	186977	187381	.	-	.	source_transcript=ENST00000711114.1;source_transcript_name=PPP2R3B-233;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711114.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711114.1;transcript_score=299.358;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00140_ch_T0000022;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000022;transcript_name=HG00140_ch_T0000022;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000022:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	180055	191830	1000	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=298.828;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=HG00140_ch_T0000023;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_G0000007;transcript_name=HG00140_ch_T0000023;gene_name=PPP2R3B;ID=HG00140_ch_T0000023;Name=PPP2R3B
HG00140_chrY	CAT	exon	180055	184695	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=298.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=HG00140_ch_T0000023;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000023;transcript_name=HG00140_ch_T0000023;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000023:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	184696	186473	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=298.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=HG00140_ch_T0000023;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000023;transcript_name=HG00140_ch_T0000023;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000023:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	186474	186649	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=298.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=HG00140_ch_T0000023;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000023;transcript_name=HG00140_ch_T0000023;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000023:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	186650	186976	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=298.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=HG00140_ch_T0000023;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000023;transcript_name=HG00140_ch_T0000023;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000023:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	186977	187599	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=298.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=HG00140_ch_T0000023;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000023;transcript_name=HG00140_ch_T0000023;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000023:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	187600	190047	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=298.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=HG00140_ch_T0000023;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000023;transcript_name=HG00140_ch_T0000023;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000023:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	190048	190204	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=298.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=HG00140_ch_T0000023;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000023;transcript_name=HG00140_ch_T0000023;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000023:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	190205	190711	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=298.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=HG00140_ch_T0000023;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000023;transcript_name=HG00140_ch_T0000023;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000023:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	190712	190798	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=298.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=HG00140_ch_T0000023;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000023;transcript_name=HG00140_ch_T0000023;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000023:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	190799	191238	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=298.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=HG00140_ch_T0000023;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000023;transcript_name=HG00140_ch_T0000023;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000023:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	191239	191313	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=298.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=HG00140_ch_T0000023;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000023;transcript_name=HG00140_ch_T0000023;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000023:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	191314	191739	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=298.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=HG00140_ch_T0000023;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000023;transcript_name=HG00140_ch_T0000023;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000023:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	191740	191830	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711113.1;transcript_score=298.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711113.1;transcript_id=HG00140_ch_T0000023;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000023;transcript_name=HG00140_ch_T0000023;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000023:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	180055	191830	1000	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=298.828;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00140_ch_T0000024;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_G0000007;transcript_name=HG00140_ch_T0000024;gene_name=PPP2R3B;ID=HG00140_ch_T0000024;Name=PPP2R3B
HG00140_chrY	CAT	exon	180055	184509	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=298.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00140_ch_T0000024;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000024;transcript_name=HG00140_ch_T0000024;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000024:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	184510	184576	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=298.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00140_ch_T0000024;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000024;transcript_name=HG00140_ch_T0000024;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000024:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	184577	184695	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=298.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00140_ch_T0000024;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000024;transcript_name=HG00140_ch_T0000024;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000024:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	184696	186473	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=298.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00140_ch_T0000024;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000024;transcript_name=HG00140_ch_T0000024;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000024:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	186474	186649	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=298.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00140_ch_T0000024;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000024;transcript_name=HG00140_ch_T0000024;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000024:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	186650	186976	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=298.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00140_ch_T0000024;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000024;transcript_name=HG00140_ch_T0000024;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000024:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	186977	187599	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=298.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00140_ch_T0000024;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000024;transcript_name=HG00140_ch_T0000024;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000024:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	187600	190047	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=298.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00140_ch_T0000024;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000024;transcript_name=HG00140_ch_T0000024;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000024:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	190048	190204	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=298.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00140_ch_T0000024;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000024;transcript_name=HG00140_ch_T0000024;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000024:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	190205	190711	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=298.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00140_ch_T0000024;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000024;transcript_name=HG00140_ch_T0000024;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000024:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	190712	190798	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=298.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00140_ch_T0000024;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000024;transcript_name=HG00140_ch_T0000024;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000024:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	190799	191238	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=298.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00140_ch_T0000024;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000024;transcript_name=HG00140_ch_T0000024;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000024:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	191239	191313	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=298.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00140_ch_T0000024;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000024;transcript_name=HG00140_ch_T0000024;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000024:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	191314	191739	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=298.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00140_ch_T0000024;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000024;transcript_name=HG00140_ch_T0000024;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000024:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	191740	191830	.	-	.	source_transcript=ENST00000711113.1;source_transcript_name=PPP2R3B-232;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711113.1;transcript_score=298.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;transcript_id=HG00140_ch_T0000024;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000024;transcript_name=HG00140_ch_T0000024;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000024:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	184412	190161	1000	-	.	source_transcript=ENST00000711112.1;source_transcript_name=PPP2R3B-231;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711112.1;transcript_score=299.299;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711112.1,ENST00000711112.1;transcript_id=HG00140_ch_T0000025;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_G0000007;transcript_name=HG00140_ch_T0000025;gene_name=PPP2R3B;ID=HG00140_ch_T0000025;Name=PPP2R3B
HG00140_chrY	CAT	exon	184412	184695	.	-	.	source_transcript=ENST00000711112.1;source_transcript_name=PPP2R3B-231;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711112.1;transcript_score=299.299;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711112.1,ENST00000711112.1;transcript_id=HG00140_ch_T0000025;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000025;transcript_name=HG00140_ch_T0000025;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000025:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	184696	186473	.	-	.	source_transcript=ENST00000711112.1;source_transcript_name=PPP2R3B-231;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711112.1;transcript_score=299.299;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711112.1,ENST00000711112.1;transcript_id=HG00140_ch_T0000025;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000025;transcript_name=HG00140_ch_T0000025;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000025:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	186474	186649	.	-	.	source_transcript=ENST00000711112.1;source_transcript_name=PPP2R3B-231;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711112.1;transcript_score=299.299;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711112.1,ENST00000711112.1;transcript_id=HG00140_ch_T0000025;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000025;transcript_name=HG00140_ch_T0000025;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000025:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	186650	186976	.	-	.	source_transcript=ENST00000711112.1;source_transcript_name=PPP2R3B-231;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711112.1;transcript_score=299.299;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711112.1,ENST00000711112.1;transcript_id=HG00140_ch_T0000025;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000025;transcript_name=HG00140_ch_T0000025;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000025:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	186977	187066	.	-	.	source_transcript=ENST00000711112.1;source_transcript_name=PPP2R3B-231;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711112.1;transcript_score=299.299;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711112.1,ENST00000711112.1;transcript_id=HG00140_ch_T0000025;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000025;transcript_name=HG00140_ch_T0000025;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000025:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	187067	187550	.	-	.	source_transcript=ENST00000711112.1;source_transcript_name=PPP2R3B-231;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711112.1;transcript_score=299.299;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711112.1,ENST00000711112.1;transcript_id=HG00140_ch_T0000025;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000025;transcript_name=HG00140_ch_T0000025;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000025:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	187551	187599	.	-	.	source_transcript=ENST00000711112.1;source_transcript_name=PPP2R3B-231;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711112.1;transcript_score=299.299;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711112.1,ENST00000711112.1;transcript_id=HG00140_ch_T0000025;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000025;transcript_name=HG00140_ch_T0000025;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000025:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	187600	190047	.	-	.	source_transcript=ENST00000711112.1;source_transcript_name=PPP2R3B-231;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711112.1;transcript_score=299.299;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711112.1,ENST00000711112.1;transcript_id=HG00140_ch_T0000025;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000025;transcript_name=HG00140_ch_T0000025;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000025:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	190048	190161	.	-	.	source_transcript=ENST00000711112.1;source_transcript_name=PPP2R3B-231;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711112.1;transcript_score=299.299;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711112.1,ENST00000711112.1;transcript_id=HG00140_ch_T0000025;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000025;transcript_name=HG00140_ch_T0000025;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000025:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	186474	190158	1000	-	.	source_transcript=ENST00000711128.1;source_transcript_name=PPP2R3B-240;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711128.1;transcript_score=299.59000000000003;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711128.1,ENST00000711128.1;transcript_id=HG00140_ch_T0000026;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_G0000007;transcript_name=HG00140_ch_T0000026;gene_name=PPP2R3B;ID=HG00140_ch_T0000026;Name=PPP2R3B
HG00140_chrY	CAT	exon	186474	186649	.	-	.	source_transcript=ENST00000711128.1;source_transcript_name=PPP2R3B-240;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711128.1;transcript_score=299.59000000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711128.1,ENST00000711128.1;transcript_id=HG00140_ch_T0000026;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000026;transcript_name=HG00140_ch_T0000026;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000026:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	186650	186976	.	-	.	source_transcript=ENST00000711128.1;source_transcript_name=PPP2R3B-240;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711128.1;transcript_score=299.59000000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711128.1,ENST00000711128.1;transcript_id=HG00140_ch_T0000026;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000026;transcript_name=HG00140_ch_T0000026;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000026:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	186977	187066	.	-	.	source_transcript=ENST00000711128.1;source_transcript_name=PPP2R3B-240;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711128.1;transcript_score=299.59000000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711128.1,ENST00000711128.1;transcript_id=HG00140_ch_T0000026;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000026;transcript_name=HG00140_ch_T0000026;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000026:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	187067	187550	.	-	.	source_transcript=ENST00000711128.1;source_transcript_name=PPP2R3B-240;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711128.1;transcript_score=299.59000000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711128.1,ENST00000711128.1;transcript_id=HG00140_ch_T0000026;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000026;transcript_name=HG00140_ch_T0000026;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000026:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	187551	187904	.	-	.	source_transcript=ENST00000711128.1;source_transcript_name=PPP2R3B-240;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711128.1;transcript_score=299.59000000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711128.1,ENST00000711128.1;transcript_id=HG00140_ch_T0000026;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000026;transcript_name=HG00140_ch_T0000026;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000026:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	187905	190047	.	-	.	source_transcript=ENST00000711128.1;source_transcript_name=PPP2R3B-240;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711128.1;transcript_score=299.59000000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711128.1,ENST00000711128.1;transcript_id=HG00140_ch_T0000026;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000026;transcript_name=HG00140_ch_T0000026;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000026:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	190048	190158	.	-	.	source_transcript=ENST00000711128.1;source_transcript_name=PPP2R3B-240;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711128.1;transcript_score=299.59000000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711128.1,ENST00000711128.1;transcript_id=HG00140_ch_T0000026;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000026;transcript_name=HG00140_ch_T0000026;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000026:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	187579	191052	1000	-	.	source_transcript=ENST00000711127.1;source_transcript_name=PPP2R3B-239;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711127.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711127.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711127.1,ENST00000711127.1;transcript_id=HG00140_ch_T0000027;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_G0000007;transcript_name=HG00140_ch_T0000027;gene_name=PPP2R3B;ID=HG00140_ch_T0000027;Name=PPP2R3B
HG00140_chrY	CAT	exon	187579	187599	.	-	.	source_transcript=ENST00000711127.1;source_transcript_name=PPP2R3B-239;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711127.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711127.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711127.1,ENST00000711127.1;transcript_id=HG00140_ch_T0000027;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000027;transcript_name=HG00140_ch_T0000027;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000027:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	187600	190047	.	-	.	source_transcript=ENST00000711127.1;source_transcript_name=PPP2R3B-239;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711127.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711127.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711127.1,ENST00000711127.1;transcript_id=HG00140_ch_T0000027;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000027;transcript_name=HG00140_ch_T0000027;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000027:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	190048	190204	.	-	.	source_transcript=ENST00000711127.1;source_transcript_name=PPP2R3B-239;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711127.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711127.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711127.1,ENST00000711127.1;transcript_id=HG00140_ch_T0000027;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000027;transcript_name=HG00140_ch_T0000027;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000027:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	190205	190711	.	-	.	source_transcript=ENST00000711127.1;source_transcript_name=PPP2R3B-239;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711127.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711127.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711127.1,ENST00000711127.1;transcript_id=HG00140_ch_T0000027;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000027;transcript_name=HG00140_ch_T0000027;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000027:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	190712	191052	.	-	.	source_transcript=ENST00000711127.1;source_transcript_name=PPP2R3B-239;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711127.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711127.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711127.1,ENST00000711127.1;transcript_id=HG00140_ch_T0000027;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000027;transcript_name=HG00140_ch_T0000027;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000027:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	189428	231467	1000	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.7;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=HG00140_ch_T0000028;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_G0000007;transcript_name=HG00140_ch_T0000028;gene_name=PPP2R3B;ID=HG00140_ch_T0000028;Name=PPP2R3B
HG00140_chrY	CAT	exon	189428	190204	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=HG00140_ch_T0000028;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000028;transcript_name=HG00140_ch_T0000028;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000028:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	190205	190711	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=HG00140_ch_T0000028;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000028;transcript_name=HG00140_ch_T0000028;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000028:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	190712	190798	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=HG00140_ch_T0000028;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000028;transcript_name=HG00140_ch_T0000028;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000028:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	190799	191238	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=HG00140_ch_T0000028;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000028;transcript_name=HG00140_ch_T0000028;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000028:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	191239	191313	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=HG00140_ch_T0000028;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000028;transcript_name=HG00140_ch_T0000028;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000028:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	191314	191739	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=HG00140_ch_T0000028;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000028;transcript_name=HG00140_ch_T0000028;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000028:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	191740	191842	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=HG00140_ch_T0000028;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000028;transcript_name=HG00140_ch_T0000028;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000028:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	191843	192095	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=HG00140_ch_T0000028;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000028;transcript_name=HG00140_ch_T0000028;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000028:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	192096	192199	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=HG00140_ch_T0000028;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000028;transcript_name=HG00140_ch_T0000028;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000028:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	192200	205894	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=HG00140_ch_T0000028;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000028;transcript_name=HG00140_ch_T0000028;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000028:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	205895	206080	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=HG00140_ch_T0000028;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000028;transcript_name=HG00140_ch_T0000028;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000028:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	206081	206744	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=HG00140_ch_T0000028;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000028;transcript_name=HG00140_ch_T0000028;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000028:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	206745	206822	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=HG00140_ch_T0000028;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000028;transcript_name=HG00140_ch_T0000028;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000028:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	206823	230879	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=HG00140_ch_T0000028;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000028;transcript_name=HG00140_ch_T0000028;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000028:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	230880	231467	.	-	.	source_transcript=ENST00000711126.1;source_transcript_name=PPP2R3B-238;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711126.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711126.1;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711126.1,ENST00000711126.1;transcript_id=HG00140_ch_T0000028;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000028;transcript_name=HG00140_ch_T0000028;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000028:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	191175	206006	1000	-	.	source_transcript=ENST00000711125.1;source_transcript_name=PPP2R3B-237;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711125.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711125.1;transcript_score=299.563;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711125.1,ENST00000711125.1;transcript_id=HG00140_ch_T0000029;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_G0000007;transcript_name=HG00140_ch_T0000029;gene_name=PPP2R3B;ID=HG00140_ch_T0000029;Name=PPP2R3B
HG00140_chrY	CAT	exon	191175	191313	.	-	.	source_transcript=ENST00000711125.1;source_transcript_name=PPP2R3B-237;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711125.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711125.1;transcript_score=299.563;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711125.1,ENST00000711125.1;transcript_id=HG00140_ch_T0000029;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000029;transcript_name=HG00140_ch_T0000029;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000029:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	191314	191739	.	-	.	source_transcript=ENST00000711125.1;source_transcript_name=PPP2R3B-237;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711125.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711125.1;transcript_score=299.563;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711125.1,ENST00000711125.1;transcript_id=HG00140_ch_T0000029;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000029;transcript_name=HG00140_ch_T0000029;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000029:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	191740	191842	.	-	.	source_transcript=ENST00000711125.1;source_transcript_name=PPP2R3B-237;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711125.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711125.1;transcript_score=299.563;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711125.1,ENST00000711125.1;transcript_id=HG00140_ch_T0000029;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000029;transcript_name=HG00140_ch_T0000029;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000029:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	191843	192095	.	-	.	source_transcript=ENST00000711125.1;source_transcript_name=PPP2R3B-237;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711125.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711125.1;transcript_score=299.563;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711125.1,ENST00000711125.1;transcript_id=HG00140_ch_T0000029;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000029;transcript_name=HG00140_ch_T0000029;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000029:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	192096	192199	.	-	.	source_transcript=ENST00000711125.1;source_transcript_name=PPP2R3B-237;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711125.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711125.1;transcript_score=299.563;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711125.1,ENST00000711125.1;transcript_id=HG00140_ch_T0000029;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000029;transcript_name=HG00140_ch_T0000029;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000029:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	192200	205894	.	-	.	source_transcript=ENST00000711125.1;source_transcript_name=PPP2R3B-237;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711125.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711125.1;transcript_score=299.563;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711125.1,ENST00000711125.1;transcript_id=HG00140_ch_T0000029;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000029;transcript_name=HG00140_ch_T0000029;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000029:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	205895	206006	.	-	.	source_transcript=ENST00000711125.1;source_transcript_name=PPP2R3B-237;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711125.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711125.1;transcript_score=299.563;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711125.1,ENST00000711125.1;transcript_id=HG00140_ch_T0000029;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000029;transcript_name=HG00140_ch_T0000029;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000029:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	191258	192344	1000	-	.	source_transcript=ENST00000711124.1;source_transcript_name=PPP2R3B-236;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711124.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711124.1;transcript_score=299.755;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711124.1,ENST00000711124.1;transcript_id=HG00140_ch_T0000030;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_G0000007;transcript_name=HG00140_ch_T0000030;gene_name=PPP2R3B;ID=HG00140_ch_T0000030;Name=PPP2R3B
HG00140_chrY	CAT	exon	191258	191313	.	-	.	source_transcript=ENST00000711124.1;source_transcript_name=PPP2R3B-236;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711124.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711124.1;transcript_score=299.755;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711124.1,ENST00000711124.1;transcript_id=HG00140_ch_T0000030;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000030;transcript_name=HG00140_ch_T0000030;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000030:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	191314	191739	.	-	.	source_transcript=ENST00000711124.1;source_transcript_name=PPP2R3B-236;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711124.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711124.1;transcript_score=299.755;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711124.1,ENST00000711124.1;transcript_id=HG00140_ch_T0000030;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000030;transcript_name=HG00140_ch_T0000030;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000030:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	191740	191842	.	-	.	source_transcript=ENST00000711124.1;source_transcript_name=PPP2R3B-236;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711124.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711124.1;transcript_score=299.755;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711124.1,ENST00000711124.1;transcript_id=HG00140_ch_T0000030;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000030;transcript_name=HG00140_ch_T0000030;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000030:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	191843	192095	.	-	.	source_transcript=ENST00000711124.1;source_transcript_name=PPP2R3B-236;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711124.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711124.1;transcript_score=299.755;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711124.1,ENST00000711124.1;transcript_id=HG00140_ch_T0000030;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000030;transcript_name=HG00140_ch_T0000030;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000030:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	192096	192344	.	-	.	source_transcript=ENST00000711124.1;source_transcript_name=PPP2R3B-236;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711124.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711124.1;transcript_score=299.755;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711124.1,ENST00000711124.1;transcript_id=HG00140_ch_T0000030;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000030;transcript_name=HG00140_ch_T0000030;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000030:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	192117	218852	100	-	.	source_transcript=ENST00000711123.1;source_transcript_name=PPP2R3B-235;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711123.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711123.1,ENST00000711123.1;transcript_id=HG00140_ch_T0000031;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_G0000007;transcript_name=HG00140_ch_T0000031;gene_name=PPP2R3B;ID=HG00140_ch_T0000031;Name=PPP2R3B
HG00140_chrY	CAT	exon	192117	192199	.	-	.	source_transcript=ENST00000711123.1;source_transcript_name=PPP2R3B-235;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711123.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711123.1,ENST00000711123.1;transcript_id=HG00140_ch_T0000031;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000031;transcript_name=HG00140_ch_T0000031;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000031:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	192117	192199	.	-	0	source_transcript=ENST00000711123.1;source_transcript_name=PPP2R3B-235;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711123.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711123.1,ENST00000711123.1;transcript_id=HG00140_ch_T0000031;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000031;transcript_name=HG00140_ch_T0000031;gene_name=PPP2R3B;ID=CDS:HG00140_ch_T0000031:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	192200	205894	.	-	.	source_transcript=ENST00000711123.1;source_transcript_name=PPP2R3B-235;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711123.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711123.1,ENST00000711123.1;transcript_id=HG00140_ch_T0000031;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000031;transcript_name=HG00140_ch_T0000031;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000031:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	205895	206080	.	-	.	source_transcript=ENST00000711123.1;source_transcript_name=PPP2R3B-235;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711123.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711123.1,ENST00000711123.1;transcript_id=HG00140_ch_T0000031;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000031;transcript_name=HG00140_ch_T0000031;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000031:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	205895	206080	.	-	0	source_transcript=ENST00000711123.1;source_transcript_name=PPP2R3B-235;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711123.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711123.1,ENST00000711123.1;transcript_id=HG00140_ch_T0000031;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000031;transcript_name=HG00140_ch_T0000031;gene_name=PPP2R3B;ID=CDS:HG00140_ch_T0000031:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	206081	218339	.	-	.	source_transcript=ENST00000711123.1;source_transcript_name=PPP2R3B-235;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711123.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711123.1,ENST00000711123.1;transcript_id=HG00140_ch_T0000031;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000031;transcript_name=HG00140_ch_T0000031;gene_name=PPP2R3B;ID=intron:HG00140_ch_T0000031:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	218340	218852	.	-	.	source_transcript=ENST00000711123.1;source_transcript_name=PPP2R3B-235;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711123.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711123.1,ENST00000711123.1;transcript_id=HG00140_ch_T0000031;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000031;transcript_name=HG00140_ch_T0000031;gene_name=PPP2R3B;ID=exon:HG00140_ch_T0000031:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	218340	218579	.	-	0	source_transcript=ENST00000711123.1;source_transcript_name=PPP2R3B-235;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711123.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711123.1,ENST00000711123.1;transcript_id=HG00140_ch_T0000031;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000031;transcript_name=HG00140_ch_T0000031;gene_name=PPP2R3B;ID=CDS:HG00140_ch_T0000031:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	218577	218579	.	-	0	source_transcript=ENST00000711123.1;source_transcript_name=PPP2R3B-235;source_gene=ENSG00000292327.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292327.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711123.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=ENST00000711123.1,ENST00000711123.1;transcript_id=HG00140_ch_T0000031;gene_id=HG00140_ch_G0000007;Parent=HG00140_ch_T0000031;transcript_name=HG00140_ch_T0000031;gene_name=PPP2R3B;ID=start_codon:HG00140_ch_T0000031;Name=PPP2R3B;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	231474	361806	.	+	.	source_gene_common_name=ENSG00000292349;source_gene=ENSG00000292349.2;alternative_source_transcripts=ENST00000850672.1,ENST00000850672.1;gene_id=HG00140_ch_G0000008;gene_biotype=lncRNA;gene_name=ENSG00000292349;gene_sources=liftoff;ID=HG00140_ch_G0000008;Name=ENSG00000292349
HG00140_chrY	CAT	transcript	231474	266427	1000	+	.	source_transcript=ENST00000850672.1;source_transcript_name=ENST00000850672;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850672.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850672.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850672.1,ENST00000850672.1;transcript_id=HG00140_ch_T0000032;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_G0000008;transcript_name=HG00140_ch_T0000032;gene_name=ENSG00000292349;ID=HG00140_ch_T0000032;Name=ENSG00000292349
HG00140_chrY	CAT	exon	231474	231584	.	+	.	source_transcript=ENST00000850672.1;source_transcript_name=ENST00000850672;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850672.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850672.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850672.1,ENST00000850672.1;transcript_id=HG00140_ch_T0000032;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000032;transcript_name=HG00140_ch_T0000032;gene_name=ENSG00000292349;ID=exon:HG00140_ch_T0000032:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	231585	266115	.	+	.	source_transcript=ENST00000850672.1;source_transcript_name=ENST00000850672;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850672.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850672.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850672.1,ENST00000850672.1;transcript_id=HG00140_ch_T0000032;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000032;transcript_name=HG00140_ch_T0000032;gene_name=ENSG00000292349;ID=intron:HG00140_ch_T0000032:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	266116	266427	.	+	.	source_transcript=ENST00000850672.1;source_transcript_name=ENST00000850672;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850672.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850672.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850672.1,ENST00000850672.1;transcript_id=HG00140_ch_T0000032;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000032;transcript_name=HG00140_ch_T0000032;gene_name=ENSG00000292349;ID=exon:HG00140_ch_T0000032:1;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	231478	266422	1000	+	.	source_transcript=ENST00000850673.1;source_transcript_name=ENST00000850673;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850673.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850673.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850673.1,ENST00000850673.1;transcript_id=HG00140_ch_T0000033;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_G0000008;transcript_name=HG00140_ch_T0000033;gene_name=ENSG00000292349;ID=HG00140_ch_T0000033;Name=ENSG00000292349
HG00140_chrY	CAT	exon	231478	231584	.	+	.	source_transcript=ENST00000850673.1;source_transcript_name=ENST00000850673;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850673.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850673.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850673.1,ENST00000850673.1;transcript_id=HG00140_ch_T0000033;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000033;transcript_name=HG00140_ch_T0000033;gene_name=ENSG00000292349;ID=exon:HG00140_ch_T0000033:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	231585	263425	.	+	.	source_transcript=ENST00000850673.1;source_transcript_name=ENST00000850673;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850673.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850673.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850673.1,ENST00000850673.1;transcript_id=HG00140_ch_T0000033;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000033;transcript_name=HG00140_ch_T0000033;gene_name=ENSG00000292349;ID=intron:HG00140_ch_T0000033:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	263426	263914	.	+	.	source_transcript=ENST00000850673.1;source_transcript_name=ENST00000850673;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850673.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850673.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850673.1,ENST00000850673.1;transcript_id=HG00140_ch_T0000033;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000033;transcript_name=HG00140_ch_T0000033;gene_name=ENSG00000292349;ID=exon:HG00140_ch_T0000033:1;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	263915	266115	.	+	.	source_transcript=ENST00000850673.1;source_transcript_name=ENST00000850673;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850673.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850673.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850673.1,ENST00000850673.1;transcript_id=HG00140_ch_T0000033;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000033;transcript_name=HG00140_ch_T0000033;gene_name=ENSG00000292349;ID=intron:HG00140_ch_T0000033:1;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	266116	266422	.	+	.	source_transcript=ENST00000850673.1;source_transcript_name=ENST00000850673;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850673.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850673.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850673.1,ENST00000850673.1;transcript_id=HG00140_ch_T0000033;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000033;transcript_name=HG00140_ch_T0000033;gene_name=ENSG00000292349;ID=exon:HG00140_ch_T0000033:2;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	231492	250970	1000	+	.	source_transcript=ENST00000850833.1;source_transcript_name=ENST00000850833;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850833.1;transcript_score=299.926;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850833.1,ENST00000850833.1;transcript_id=HG00140_ch_T0000034;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_G0000008;transcript_name=HG00140_ch_T0000034;gene_name=ENSG00000292349;ID=HG00140_ch_T0000034;Name=ENSG00000292349
HG00140_chrY	CAT	exon	231492	231802	.	+	.	source_transcript=ENST00000850833.1;source_transcript_name=ENST00000850833;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850833.1;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850833.1,ENST00000850833.1;transcript_id=HG00140_ch_T0000034;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000034;transcript_name=HG00140_ch_T0000034;gene_name=ENSG00000292349;ID=exon:HG00140_ch_T0000034:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	231803	249925	.	+	.	source_transcript=ENST00000850833.1;source_transcript_name=ENST00000850833;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850833.1;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850833.1,ENST00000850833.1;transcript_id=HG00140_ch_T0000034;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000034;transcript_name=HG00140_ch_T0000034;gene_name=ENSG00000292349;ID=intron:HG00140_ch_T0000034:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	249926	250970	.	+	.	source_transcript=ENST00000850833.1;source_transcript_name=ENST00000850833;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850833.1;transcript_score=299.926;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850833.1,ENST00000850833.1;transcript_id=HG00140_ch_T0000034;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000034;transcript_name=HG00140_ch_T0000034;gene_name=ENSG00000292349;ID=exon:HG00140_ch_T0000034:1;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	231495	317395	1000	+	.	source_transcript=ENST00000850674.1;source_transcript_name=ENST00000850674;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850674.1;transcript_score=299.947;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850674.1,ENST00000850674.1;transcript_id=HG00140_ch_T0000035;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_G0000008;transcript_name=HG00140_ch_T0000035;gene_name=ENSG00000292349;ID=HG00140_ch_T0000035;Name=ENSG00000292349
HG00140_chrY	CAT	exon	231495	231802	.	+	.	source_transcript=ENST00000850674.1;source_transcript_name=ENST00000850674;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850674.1;transcript_score=299.947;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850674.1,ENST00000850674.1;transcript_id=HG00140_ch_T0000035;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000035;transcript_name=HG00140_ch_T0000035;gene_name=ENSG00000292349;ID=exon:HG00140_ch_T0000035:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	231803	304707	.	+	.	source_transcript=ENST00000850674.1;source_transcript_name=ENST00000850674;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850674.1;transcript_score=299.947;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850674.1,ENST00000850674.1;transcript_id=HG00140_ch_T0000035;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000035;transcript_name=HG00140_ch_T0000035;gene_name=ENSG00000292349;ID=intron:HG00140_ch_T0000035:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	304708	305320	.	+	.	source_transcript=ENST00000850674.1;source_transcript_name=ENST00000850674;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850674.1;transcript_score=299.947;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850674.1,ENST00000850674.1;transcript_id=HG00140_ch_T0000035;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000035;transcript_name=HG00140_ch_T0000035;gene_name=ENSG00000292349;ID=exon:HG00140_ch_T0000035:1;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	305321	314769	.	+	.	source_transcript=ENST00000850674.1;source_transcript_name=ENST00000850674;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850674.1;transcript_score=299.947;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850674.1,ENST00000850674.1;transcript_id=HG00140_ch_T0000035;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000035;transcript_name=HG00140_ch_T0000035;gene_name=ENSG00000292349;ID=intron:HG00140_ch_T0000035:1;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	314770	314890	.	+	.	source_transcript=ENST00000850674.1;source_transcript_name=ENST00000850674;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850674.1;transcript_score=299.947;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850674.1,ENST00000850674.1;transcript_id=HG00140_ch_T0000035;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000035;transcript_name=HG00140_ch_T0000035;gene_name=ENSG00000292349;ID=exon:HG00140_ch_T0000035:2;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	314891	315960	.	+	.	source_transcript=ENST00000850674.1;source_transcript_name=ENST00000850674;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850674.1;transcript_score=299.947;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850674.1,ENST00000850674.1;transcript_id=HG00140_ch_T0000035;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000035;transcript_name=HG00140_ch_T0000035;gene_name=ENSG00000292349;ID=intron:HG00140_ch_T0000035:2;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	315961	316159	.	+	.	source_transcript=ENST00000850674.1;source_transcript_name=ENST00000850674;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850674.1;transcript_score=299.947;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850674.1,ENST00000850674.1;transcript_id=HG00140_ch_T0000035;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000035;transcript_name=HG00140_ch_T0000035;gene_name=ENSG00000292349;ID=exon:HG00140_ch_T0000035:3;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	316160	316765	.	+	.	source_transcript=ENST00000850674.1;source_transcript_name=ENST00000850674;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850674.1;transcript_score=299.947;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850674.1,ENST00000850674.1;transcript_id=HG00140_ch_T0000035;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000035;transcript_name=HG00140_ch_T0000035;gene_name=ENSG00000292349;ID=intron:HG00140_ch_T0000035:3;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	316766	317395	.	+	.	source_transcript=ENST00000850674.1;source_transcript_name=ENST00000850674;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850674.1;transcript_score=299.947;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850674.1,ENST00000850674.1;transcript_id=HG00140_ch_T0000035;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000035;transcript_name=HG00140_ch_T0000035;gene_name=ENSG00000292349;ID=exon:HG00140_ch_T0000035:4;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	231547	361806	1000	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.843;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=HG00140_ch_T0000036;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_G0000008;transcript_name=HG00140_ch_T0000036;gene_name=ENSG00000292349;ID=HG00140_ch_T0000036;Name=ENSG00000292349
HG00140_chrY	CAT	exon	231547	231802	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=HG00140_ch_T0000036;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000036;transcript_name=HG00140_ch_T0000036;gene_name=ENSG00000292349;ID=exon:HG00140_ch_T0000036:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	231803	280775	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=HG00140_ch_T0000036;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000036;transcript_name=HG00140_ch_T0000036;gene_name=ENSG00000292349;ID=intron:HG00140_ch_T0000036:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	280776	280890	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=HG00140_ch_T0000036;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000036;transcript_name=HG00140_ch_T0000036;gene_name=ENSG00000292349;ID=exon:HG00140_ch_T0000036:1;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	280891	282477	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=HG00140_ch_T0000036;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000036;transcript_name=HG00140_ch_T0000036;gene_name=ENSG00000292349;ID=intron:HG00140_ch_T0000036:1;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	282478	282644	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=HG00140_ch_T0000036;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000036;transcript_name=HG00140_ch_T0000036;gene_name=ENSG00000292349;ID=exon:HG00140_ch_T0000036:2;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	282645	304707	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=HG00140_ch_T0000036;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000036;transcript_name=HG00140_ch_T0000036;gene_name=ENSG00000292349;ID=intron:HG00140_ch_T0000036:2;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	304708	305320	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=HG00140_ch_T0000036;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000036;transcript_name=HG00140_ch_T0000036;gene_name=ENSG00000292349;ID=exon:HG00140_ch_T0000036:3;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	305321	333743	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=HG00140_ch_T0000036;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000036;transcript_name=HG00140_ch_T0000036;gene_name=ENSG00000292349;ID=intron:HG00140_ch_T0000036:3;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	333744	333884	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=HG00140_ch_T0000036;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000036;transcript_name=HG00140_ch_T0000036;gene_name=ENSG00000292349;ID=exon:HG00140_ch_T0000036:4;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	333885	340286	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=HG00140_ch_T0000036;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000036;transcript_name=HG00140_ch_T0000036;gene_name=ENSG00000292349;ID=intron:HG00140_ch_T0000036:4;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	340287	340402	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=HG00140_ch_T0000036;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000036;transcript_name=HG00140_ch_T0000036;gene_name=ENSG00000292349;ID=exon:HG00140_ch_T0000036:5;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	340403	346346	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=HG00140_ch_T0000036;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000036;transcript_name=HG00140_ch_T0000036;gene_name=ENSG00000292349;ID=intron:HG00140_ch_T0000036:5;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	346347	346420	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=HG00140_ch_T0000036;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000036;transcript_name=HG00140_ch_T0000036;gene_name=ENSG00000292349;ID=exon:HG00140_ch_T0000036:6;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	346421	360743	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=HG00140_ch_T0000036;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000036;transcript_name=HG00140_ch_T0000036;gene_name=ENSG00000292349;ID=intron:HG00140_ch_T0000036:6;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	360744	361806	.	+	.	source_transcript=ENST00000850675.1;source_transcript_name=ENST00000850675;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850675.1;transcript_score=299.843;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850675.1,ENST00000850675.1;transcript_id=HG00140_ch_T0000036;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000036;transcript_name=HG00140_ch_T0000036;gene_name=ENSG00000292349;ID=exon:HG00140_ch_T0000036:7;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	250211	263184	1000	+	.	source_transcript=ENST00000850676.1;source_transcript_name=ENST00000850676;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850676.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850676.1,ENST00000850676.1;transcript_id=HG00140_ch_T0000038;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_G0000008;transcript_name=HG00140_ch_T0000038;gene_name=ENSG00000292349;ID=HG00140_ch_T0000038;Name=ENSG00000292349
HG00140_chrY	CAT	exon	250211	250843	.	+	.	source_transcript=ENST00000850676.1;source_transcript_name=ENST00000850676;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850676.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850676.1,ENST00000850676.1;transcript_id=HG00140_ch_T0000038;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000038;transcript_name=HG00140_ch_T0000038;gene_name=ENSG00000292349;ID=exon:HG00140_ch_T0000038:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	250844	253739	.	+	.	source_transcript=ENST00000850676.1;source_transcript_name=ENST00000850676;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850676.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850676.1,ENST00000850676.1;transcript_id=HG00140_ch_T0000038;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000038;transcript_name=HG00140_ch_T0000038;gene_name=ENSG00000292349;ID=intron:HG00140_ch_T0000038:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	253740	253986	.	+	.	source_transcript=ENST00000850676.1;source_transcript_name=ENST00000850676;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850676.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850676.1,ENST00000850676.1;transcript_id=HG00140_ch_T0000038;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000038;transcript_name=HG00140_ch_T0000038;gene_name=ENSG00000292349;ID=exon:HG00140_ch_T0000038:1;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	253987	260617	.	+	.	source_transcript=ENST00000850676.1;source_transcript_name=ENST00000850676;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850676.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850676.1,ENST00000850676.1;transcript_id=HG00140_ch_T0000038;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000038;transcript_name=HG00140_ch_T0000038;gene_name=ENSG00000292349;ID=intron:HG00140_ch_T0000038:1;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	260618	260906	.	+	.	source_transcript=ENST00000850676.1;source_transcript_name=ENST00000850676;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850676.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850676.1,ENST00000850676.1;transcript_id=HG00140_ch_T0000038;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000038;transcript_name=HG00140_ch_T0000038;gene_name=ENSG00000292349;ID=exon:HG00140_ch_T0000038:2;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	260907	262810	.	+	.	source_transcript=ENST00000850676.1;source_transcript_name=ENST00000850676;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850676.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850676.1,ENST00000850676.1;transcript_id=HG00140_ch_T0000038;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000038;transcript_name=HG00140_ch_T0000038;gene_name=ENSG00000292349;ID=intron:HG00140_ch_T0000038:2;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	262811	263184	.	+	.	source_transcript=ENST00000850676.1;source_transcript_name=ENST00000850676;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850676.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850676.1,ENST00000850676.1;transcript_id=HG00140_ch_T0000038;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000038;transcript_name=HG00140_ch_T0000038;gene_name=ENSG00000292349;ID=exon:HG00140_ch_T0000038:3;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	250467	315067	1000	+	.	source_transcript=ENST00000850677.1;source_transcript_name=ENST00000850677;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850677.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850677.1,ENST00000850677.1;transcript_id=HG00140_ch_T0000039;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_G0000008;transcript_name=HG00140_ch_T0000039;gene_name=ENSG00000292349;ID=HG00140_ch_T0000039;Name=ENSG00000292349
HG00140_chrY	CAT	exon	250467	250814	.	+	.	source_transcript=ENST00000850677.1;source_transcript_name=ENST00000850677;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850677.1,ENST00000850677.1;transcript_id=HG00140_ch_T0000039;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000039;transcript_name=HG00140_ch_T0000039;gene_name=ENSG00000292349;ID=exon:HG00140_ch_T0000039:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	250815	304707	.	+	.	source_transcript=ENST00000850677.1;source_transcript_name=ENST00000850677;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850677.1,ENST00000850677.1;transcript_id=HG00140_ch_T0000039;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000039;transcript_name=HG00140_ch_T0000039;gene_name=ENSG00000292349;ID=intron:HG00140_ch_T0000039:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	304708	305320	.	+	.	source_transcript=ENST00000850677.1;source_transcript_name=ENST00000850677;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850677.1,ENST00000850677.1;transcript_id=HG00140_ch_T0000039;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000039;transcript_name=HG00140_ch_T0000039;gene_name=ENSG00000292349;ID=exon:HG00140_ch_T0000039:1;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	305321	314769	.	+	.	source_transcript=ENST00000850677.1;source_transcript_name=ENST00000850677;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850677.1,ENST00000850677.1;transcript_id=HG00140_ch_T0000039;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000039;transcript_name=HG00140_ch_T0000039;gene_name=ENSG00000292349;ID=intron:HG00140_ch_T0000039:1;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	314770	315067	.	+	.	source_transcript=ENST00000850677.1;source_transcript_name=ENST00000850677;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850677.1,ENST00000850677.1;transcript_id=HG00140_ch_T0000039;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000039;transcript_name=HG00140_ch_T0000039;gene_name=ENSG00000292349;ID=exon:HG00140_ch_T0000039:2;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	259297	260937	1000	+	.	source_transcript=ENST00000850678.1;source_transcript_name=ENST00000850678;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850678.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850678.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850678.1,ENST00000850678.1;transcript_id=HG00140_ch_T0000040;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_G0000008;transcript_name=HG00140_ch_T0000040;gene_name=ENSG00000292349;ID=HG00140_ch_T0000040;Name=ENSG00000292349
HG00140_chrY	CAT	exon	259297	259742	.	+	.	source_transcript=ENST00000850678.1;source_transcript_name=ENST00000850678;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850678.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850678.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850678.1,ENST00000850678.1;transcript_id=HG00140_ch_T0000040;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000040;transcript_name=HG00140_ch_T0000040;gene_name=ENSG00000292349;ID=exon:HG00140_ch_T0000040:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	259743	260617	.	+	.	source_transcript=ENST00000850678.1;source_transcript_name=ENST00000850678;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850678.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850678.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850678.1,ENST00000850678.1;transcript_id=HG00140_ch_T0000040;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000040;transcript_name=HG00140_ch_T0000040;gene_name=ENSG00000292349;ID=intron:HG00140_ch_T0000040:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	260618	260937	.	+	.	source_transcript=ENST00000850678.1;source_transcript_name=ENST00000850678;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850678.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850678.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850678.1,ENST00000850678.1;transcript_id=HG00140_ch_T0000040;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000040;transcript_name=HG00140_ch_T0000040;gene_name=ENSG00000292349;ID=exon:HG00140_ch_T0000040:1;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	260617	266427	1000	+	.	source_transcript=ENST00000850679.1;source_transcript_name=ENST00000850679;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850679.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850679.1,ENST00000850679.1;transcript_id=HG00140_ch_T0000041;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_G0000008;transcript_name=HG00140_ch_T0000041;gene_name=ENSG00000292349;ID=HG00140_ch_T0000041;Name=ENSG00000292349
HG00140_chrY	CAT	exon	260617	260680	.	+	.	source_transcript=ENST00000850679.1;source_transcript_name=ENST00000850679;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850679.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850679.1,ENST00000850679.1;transcript_id=HG00140_ch_T0000041;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000041;transcript_name=HG00140_ch_T0000041;gene_name=ENSG00000292349;ID=exon:HG00140_ch_T0000041:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	260681	263290	.	+	.	source_transcript=ENST00000850679.1;source_transcript_name=ENST00000850679;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850679.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850679.1,ENST00000850679.1;transcript_id=HG00140_ch_T0000041;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000041;transcript_name=HG00140_ch_T0000041;gene_name=ENSG00000292349;ID=intron:HG00140_ch_T0000041:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	263291	263914	.	+	.	source_transcript=ENST00000850679.1;source_transcript_name=ENST00000850679;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850679.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850679.1,ENST00000850679.1;transcript_id=HG00140_ch_T0000041;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000041;transcript_name=HG00140_ch_T0000041;gene_name=ENSG00000292349;ID=exon:HG00140_ch_T0000041:1;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	263915	266115	.	+	.	source_transcript=ENST00000850679.1;source_transcript_name=ENST00000850679;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850679.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850679.1,ENST00000850679.1;transcript_id=HG00140_ch_T0000041;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000041;transcript_name=HG00140_ch_T0000041;gene_name=ENSG00000292349;ID=intron:HG00140_ch_T0000041:1;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	266116	266427	.	+	.	source_transcript=ENST00000850679.1;source_transcript_name=ENST00000850679;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850679.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850679.1,ENST00000850679.1;transcript_id=HG00140_ch_T0000041;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000041;transcript_name=HG00140_ch_T0000041;gene_name=ENSG00000292349;ID=exon:HG00140_ch_T0000041:2;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	263650	266424	1000	+	.	source_transcript=ENST00000850832.1;source_transcript_name=ENST00000850832;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850832.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850832.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850832.1,ENST00000850832.1;transcript_id=HG00140_ch_T0000042;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_G0000008;transcript_name=HG00140_ch_T0000042;gene_name=ENSG00000292349;ID=HG00140_ch_T0000042;Name=ENSG00000292349
HG00140_chrY	CAT	exon	263650	263855	.	+	.	source_transcript=ENST00000850832.1;source_transcript_name=ENST00000850832;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850832.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850832.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850832.1,ENST00000850832.1;transcript_id=HG00140_ch_T0000042;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000042;transcript_name=HG00140_ch_T0000042;gene_name=ENSG00000292349;ID=exon:HG00140_ch_T0000042:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	263856	266115	.	+	.	source_transcript=ENST00000850832.1;source_transcript_name=ENST00000850832;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850832.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850832.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850832.1,ENST00000850832.1;transcript_id=HG00140_ch_T0000042;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000042;transcript_name=HG00140_ch_T0000042;gene_name=ENSG00000292349;ID=intron:HG00140_ch_T0000042:0;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	266116	266424	.	+	.	source_transcript=ENST00000850832.1;source_transcript_name=ENST00000850832;source_gene=ENSG00000292349.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292349.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850832.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850832.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292349;alternative_source_transcripts=ENST00000850832.1,ENST00000850832.1;transcript_id=HG00140_ch_T0000042;gene_id=HG00140_ch_G0000008;Parent=HG00140_ch_T0000042;transcript_name=HG00140_ch_T0000042;gene_name=ENSG00000292349;ID=exon:HG00140_ch_T0000042:1;Name=ENSG00000292349;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	232612	232901	.	-	.	source_gene_common_name=Metazoa_SRP;source_gene=ENSG00000292350.1;alternative_source_transcripts=ENST00000711149.1,ENST00000711149.1;gene_id=HG00140_ch_G0000009;gene_biotype=misc_RNA;gene_name=Metazoa_SRP;gene_sources=liftoff;ID=HG00140_ch_G0000009;Name=Metazoa_SRP
HG00140_chrY	CAT	transcript	232612	232901	1000	-	.	source_transcript=ENST00000711149.1;source_transcript_name=Metazoa_SRP.216-201;source_gene=ENSG00000292350.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000292350.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000711149.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711149.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=Metazoa_SRP;alternative_source_transcripts=ENST00000711149.1,ENST00000711149.1;transcript_id=HG00140_ch_T0000037;gene_id=HG00140_ch_G0000009;Parent=HG00140_ch_G0000009;transcript_name=HG00140_ch_T0000037;gene_name=Metazoa_SRP;ID=HG00140_ch_T0000037;Name=Metazoa_SRP
HG00140_chrY	CAT	exon	232612	232901	.	-	.	source_transcript=ENST00000711149.1;source_transcript_name=Metazoa_SRP.216-201;source_gene=ENSG00000292350.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000292350.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000711149.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711149.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=Metazoa_SRP;alternative_source_transcripts=ENST00000711149.1,ENST00000711149.1;transcript_id=HG00140_ch_T0000037;gene_id=HG00140_ch_G0000009;Parent=HG00140_ch_T0000037;transcript_name=HG00140_ch_T0000037;gene_name=Metazoa_SRP;ID=exon:HG00140_ch_T0000037:0;Name=Metazoa_SRP;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	373128	373455	.	-	.	source_gene_common_name=FABP5P13;source_gene=ENSG00000292352.1;alternative_source_transcripts=ENST00000711147.1,ENST00000711147.1;gene_id=HG00140_ch_G0000010;gene_biotype=processed_pseudogene;gene_name=FABP5P13;gene_sources=liftoff;ID=HG00140_ch_G0000010;Name=FABP5P13
HG00140_chrY	CAT	transcript	373128	373455	1000	-	.	source_transcript=ENST00000711147.1;source_transcript_name=FABP5P13-204;source_gene=ENSG00000292352.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292352.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711147.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711147.1;transcript_score=199.39;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FABP5P13;alternative_source_transcripts=ENST00000711147.1,ENST00000711147.1;transcript_id=HG00140_ch_T0000043;gene_id=HG00140_ch_G0000010;Parent=HG00140_ch_G0000010;transcript_name=HG00140_ch_T0000043;gene_name=FABP5P13;ID=HG00140_ch_T0000043;Name=FABP5P13
HG00140_chrY	CAT	exon	373128	373455	.	-	.	source_transcript=ENST00000711147.1;source_transcript_name=FABP5P13-204;source_gene=ENSG00000292352.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292352.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711147.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711147.1;transcript_score=199.39;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FABP5P13;alternative_source_transcripts=ENST00000711147.1,ENST00000711147.1;transcript_id=HG00140_ch_T0000043;gene_id=HG00140_ch_G0000010;Parent=HG00140_ch_T0000043;transcript_name=HG00140_ch_T0000043;gene_name=FABP5P13;ID=exon:HG00140_ch_T0000043:0;Name=FABP5P13;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	396039	396155	.	-	.	source_gene_common_name=KRT18P53;source_gene=ENSG00000292353.1;alternative_source_transcripts=ENST00000711146.1,ENST00000711146.1;gene_id=HG00140_ch_G0000011;gene_biotype=processed_pseudogene;gene_name=KRT18P53;gene_sources=liftoff;ID=HG00140_ch_G0000011;Name=KRT18P53
HG00140_chrY	CAT	transcript	396039	396155	1000	-	.	source_transcript=ENST00000711146.1;source_transcript_name=KRT18P53-204;source_gene=ENSG00000292353.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292353.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711146.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711146.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KRT18P53;alternative_source_transcripts=ENST00000711146.1,ENST00000711146.1;transcript_id=HG00140_ch_T0000044;gene_id=HG00140_ch_G0000011;Parent=HG00140_ch_G0000011;transcript_name=HG00140_ch_T0000044;gene_name=KRT18P53;ID=HG00140_ch_T0000044;Name=KRT18P53
HG00140_chrY	CAT	exon	396039	396155	.	-	.	source_transcript=ENST00000711146.1;source_transcript_name=KRT18P53-204;source_gene=ENSG00000292353.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292353.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711146.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711146.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KRT18P53;alternative_source_transcripts=ENST00000711146.1,ENST00000711146.1;transcript_id=HG00140_ch_T0000044;gene_id=HG00140_ch_G0000011;Parent=HG00140_ch_T0000044;transcript_name=HG00140_ch_T0000044;gene_name=KRT18P53;ID=exon:HG00140_ch_T0000044:0;Name=KRT18P53;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	450124	450932	.	+	.	source_gene_common_name=ENSG00000310543;source_gene=ENSG00000310543.1;alternative_source_transcripts=ENST00000850702.1,ENST00000850702.1;gene_id=HG00140_ch_G0000012;gene_biotype=lncRNA;gene_name=ENSG00000310543;gene_sources=liftoff,transMap;ID=HG00140_ch_G0000012;Name=ENSG00000310543
HG00140_chrY	CAT	transcript	450124	450932	1000	+	.	source_transcript=ENST00000850702.1;source_transcript_name=ENST00000850702;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850702.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850702.1;transcript_score=297.802;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;alternative_source_transcripts=ENST00000850702.1,ENST00000850702.1;transcript_id=HG00140_ch_T0000045;gene_id=HG00140_ch_G0000012;Parent=HG00140_ch_G0000012;transcript_name=HG00140_ch_T0000045;gene_name=ENSG00000310543;ID=HG00140_ch_T0000045;Name=ENSG00000310543
HG00140_chrY	CAT	exon	450124	450519	.	+	.	source_transcript=ENST00000850702.1;source_transcript_name=ENST00000850702;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850702.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850702.1;transcript_score=297.802;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;alternative_source_transcripts=ENST00000850702.1,ENST00000850702.1;transcript_id=HG00140_ch_T0000045;gene_id=HG00140_ch_G0000012;Parent=HG00140_ch_T0000045;transcript_name=HG00140_ch_T0000045;gene_name=ENSG00000310543;ID=exon:HG00140_ch_T0000045:0;Name=ENSG00000310543;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	450520	450695	.	+	.	source_transcript=ENST00000850702.1;source_transcript_name=ENST00000850702;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850702.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850702.1;transcript_score=297.802;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;alternative_source_transcripts=ENST00000850702.1,ENST00000850702.1;transcript_id=HG00140_ch_T0000045;gene_id=HG00140_ch_G0000012;Parent=HG00140_ch_T0000045;transcript_name=HG00140_ch_T0000045;gene_name=ENSG00000310543;ID=intron:HG00140_ch_T0000045:0;Name=ENSG00000310543;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	450696	450932	.	+	.	source_transcript=ENST00000850702.1;source_transcript_name=ENST00000850702;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850702.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850702.1;transcript_score=297.802;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;alternative_source_transcripts=ENST00000850702.1,ENST00000850702.1;transcript_id=HG00140_ch_T0000045;gene_id=HG00140_ch_G0000012;Parent=HG00140_ch_T0000045;transcript_name=HG00140_ch_T0000045;gene_name=ENSG00000310543;ID=exon:HG00140_ch_T0000045:1;Name=ENSG00000310543;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	450214	450932	1000	+	.	source_transcript=ENST00000850703.1;source_transcript_name=ENST00000850703;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850703.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850703.1;transcript_score=197.846;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;alternative_source_transcripts=ENST00000850703.1;transcript_id=HG00140_ch_T0000046;gene_id=HG00140_ch_G0000012;Parent=HG00140_ch_G0000012;transcript_name=HG00140_ch_T0000046;gene_name=ENSG00000310543;ID=HG00140_ch_T0000046;Name=ENSG00000310543
HG00140_chrY	CAT	exon	450214	450932	.	+	.	source_transcript=ENST00000850703.1;source_transcript_name=ENST00000850703;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850703.1;alignment_mode=transMap;normalized_transcript_id=ENST00000850703.1;transcript_score=197.846;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;alternative_source_transcripts=ENST00000850703.1;transcript_id=HG00140_ch_T0000046;gene_id=HG00140_ch_G0000012;Parent=HG00140_ch_T0000046;transcript_name=HG00140_ch_T0000046;gene_name=ENSG00000310543;ID=exon:HG00140_ch_T0000046:0;Name=ENSG00000310543;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	450214	450932	1000	+	.	source_transcript=ENST00000850703.1;source_transcript_name=ENST00000850703;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850703.1;transcript_score=197.846;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;transcript_id=HG00140_ch_T0000047;gene_id=HG00140_ch_G0000012;Parent=HG00140_ch_G0000012;transcript_name=HG00140_ch_T0000047;gene_name=ENSG00000310543;ID=HG00140_ch_T0000047;Name=ENSG00000310543
HG00140_chrY	CAT	exon	450214	450519	.	+	.	source_transcript=ENST00000850703.1;source_transcript_name=ENST00000850703;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850703.1;transcript_score=197.846;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;transcript_id=HG00140_ch_T0000047;gene_id=HG00140_ch_G0000012;Parent=HG00140_ch_T0000047;transcript_name=HG00140_ch_T0000047;gene_name=ENSG00000310543;ID=exon:HG00140_ch_T0000047:0;Name=ENSG00000310543;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	450520	450592	.	+	.	source_transcript=ENST00000850703.1;source_transcript_name=ENST00000850703;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850703.1;transcript_score=197.846;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;transcript_id=HG00140_ch_T0000047;gene_id=HG00140_ch_G0000012;Parent=HG00140_ch_T0000047;transcript_name=HG00140_ch_T0000047;gene_name=ENSG00000310543;ID=intron:HG00140_ch_T0000047:0;Name=ENSG00000310543;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	450593	450932	.	+	.	source_transcript=ENST00000850703.1;source_transcript_name=ENST00000850703;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850703.1;transcript_score=197.846;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;transcript_id=HG00140_ch_T0000047;gene_id=HG00140_ch_G0000012;Parent=HG00140_ch_T0000047;transcript_name=HG00140_ch_T0000047;gene_name=ENSG00000310543;ID=exon:HG00140_ch_T0000047:1;Name=ENSG00000310543;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	450236	450932	1000	+	.	source_transcript=ENST00000850704.1;source_transcript_name=ENST00000850704;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850704.1;transcript_score=297.531;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;alternative_source_transcripts=ENST00000850704.1,ENST00000850704.1;transcript_id=HG00140_ch_T0000048;gene_id=HG00140_ch_G0000012;Parent=HG00140_ch_G0000012;transcript_name=HG00140_ch_T0000048;gene_name=ENSG00000310543;ID=HG00140_ch_T0000048;Name=ENSG00000310543
HG00140_chrY	CAT	exon	450236	450519	.	+	.	source_transcript=ENST00000850704.1;source_transcript_name=ENST00000850704;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850704.1;transcript_score=297.531;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;alternative_source_transcripts=ENST00000850704.1,ENST00000850704.1;transcript_id=HG00140_ch_T0000048;gene_id=HG00140_ch_G0000012;Parent=HG00140_ch_T0000048;transcript_name=HG00140_ch_T0000048;gene_name=ENSG00000310543;ID=exon:HG00140_ch_T0000048:0;Name=ENSG00000310543;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	450520	450653	.	+	.	source_transcript=ENST00000850704.1;source_transcript_name=ENST00000850704;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850704.1;transcript_score=297.531;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;alternative_source_transcripts=ENST00000850704.1,ENST00000850704.1;transcript_id=HG00140_ch_T0000048;gene_id=HG00140_ch_G0000012;Parent=HG00140_ch_T0000048;transcript_name=HG00140_ch_T0000048;gene_name=ENSG00000310543;ID=intron:HG00140_ch_T0000048:0;Name=ENSG00000310543;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	450654	450932	.	+	.	source_transcript=ENST00000850704.1;source_transcript_name=ENST00000850704;source_gene=ENSG00000310543.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310543.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850704.1;transcript_score=297.531;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310543;alternative_source_transcripts=ENST00000850704.1,ENST00000850704.1;transcript_id=HG00140_ch_T0000048;gene_id=HG00140_ch_G0000012;Parent=HG00140_ch_T0000048;transcript_name=HG00140_ch_T0000048;gene_name=ENSG00000310543;ID=exon:HG00140_ch_T0000048:1;Name=ENSG00000310543;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	474233	509065	.	+	.	source_gene_common_name=SHOX;source_gene=ENSG00000292354.1;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;gene_id=HG00140_ch_G0000013;gene_biotype=protein_coding;gene_name=SHOX;gene_sources=liftoff;ID=HG00140_ch_G0000013;Name=SHOX
HG00140_chrY	CAT	transcript	474233	509065	100	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG00140_ch_T0000049;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_G0000013;transcript_name=HG00140_ch_T0000049;gene_name=SHOX;ID=HG00140_ch_T0000049;Name=SHOX
HG00140_chrY	CAT	exon	474233	474490	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG00140_ch_T0000049;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000049;transcript_name=HG00140_ch_T0000049;gene_name=SHOX;ID=exon:HG00140_ch_T0000049:0;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	474491	480203	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG00140_ch_T0000049;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000049;transcript_name=HG00140_ch_T0000049;gene_name=SHOX;ID=intron:HG00140_ch_T0000049:0;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	480204	480912	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG00140_ch_T0000049;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000049;transcript_name=HG00140_ch_T0000049;gene_name=SHOX;ID=exon:HG00140_ch_T0000049:1;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	480636	480912	.	+	0	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG00140_ch_T0000049;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000049;transcript_name=HG00140_ch_T0000049;gene_name=SHOX;ID=CDS:HG00140_ch_T0000049:0;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	480636	480638	.	+	0	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG00140_ch_T0000049;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000049;transcript_name=HG00140_ch_T0000049;gene_name=SHOX;ID=start_codon:HG00140_ch_T0000049;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	480913	484359	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG00140_ch_T0000049;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000049;transcript_name=HG00140_ch_T0000049;gene_name=SHOX;ID=intron:HG00140_ch_T0000049:1;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	484360	484568	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG00140_ch_T0000049;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000049;transcript_name=HG00140_ch_T0000049;gene_name=SHOX;ID=exon:HG00140_ch_T0000049:2;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	484360	484568	.	+	2	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG00140_ch_T0000049;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000049;transcript_name=HG00140_ch_T0000049;gene_name=SHOX;ID=CDS:HG00140_ch_T0000049:1;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	484569	490393	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG00140_ch_T0000049;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000049;transcript_name=HG00140_ch_T0000049;gene_name=SHOX;ID=intron:HG00140_ch_T0000049:2;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	490394	490451	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG00140_ch_T0000049;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000049;transcript_name=HG00140_ch_T0000049;gene_name=SHOX;ID=exon:HG00140_ch_T0000049:3;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	490394	490451	.	+	0	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG00140_ch_T0000049;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000049;transcript_name=HG00140_ch_T0000049;gene_name=SHOX;ID=CDS:HG00140_ch_T0000049:2;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	490452	490571	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG00140_ch_T0000049;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000049;transcript_name=HG00140_ch_T0000049;gene_name=SHOX;ID=intron:HG00140_ch_T0000049:3;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	490572	490660	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG00140_ch_T0000049;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000049;transcript_name=HG00140_ch_T0000049;gene_name=SHOX;ID=exon:HG00140_ch_T0000049:4;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	490572	490660	.	+	2	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG00140_ch_T0000049;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000049;transcript_name=HG00140_ch_T0000049;gene_name=SHOX;ID=CDS:HG00140_ch_T0000049:3;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	490661	508438	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG00140_ch_T0000049;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000049;transcript_name=HG00140_ch_T0000049;gene_name=SHOX;ID=intron:HG00140_ch_T0000049:4;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	508439	509065	.	+	.	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG00140_ch_T0000049;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000049;transcript_name=HG00140_ch_T0000049;gene_name=SHOX;ID=exon:HG00140_ch_T0000049:5;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	508439	508483	.	+	0	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG00140_ch_T0000049;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000049;transcript_name=HG00140_ch_T0000049;gene_name=SHOX;ID=CDS:HG00140_ch_T0000049:4;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	508481	508483	.	+	0	source_transcript=ENST00000711143.1;source_transcript_name=SHOX-207;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711143.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711143.1,ENST00000711143.1;transcript_id=HG00140_ch_T0000049;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000049;transcript_name=HG00140_ch_T0000049;gene_name=SHOX;ID=stop_codon:HG00140_ch_T0000049;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	474233	496396	100	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG00140_ch_T0000050;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_G0000013;transcript_name=HG00140_ch_T0000050;gene_name=SHOX;ID=HG00140_ch_T0000050;Name=SHOX
HG00140_chrY	CAT	exon	474233	474490	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG00140_ch_T0000050;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000050;transcript_name=HG00140_ch_T0000050;gene_name=SHOX;ID=exon:HG00140_ch_T0000050:0;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	474491	480203	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG00140_ch_T0000050;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000050;transcript_name=HG00140_ch_T0000050;gene_name=SHOX;ID=intron:HG00140_ch_T0000050:0;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	480204	480912	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG00140_ch_T0000050;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000050;transcript_name=HG00140_ch_T0000050;gene_name=SHOX;ID=exon:HG00140_ch_T0000050:1;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	480636	480912	.	+	0	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG00140_ch_T0000050;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000050;transcript_name=HG00140_ch_T0000050;gene_name=SHOX;ID=CDS:HG00140_ch_T0000050:0;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	480636	480638	.	+	0	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG00140_ch_T0000050;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000050;transcript_name=HG00140_ch_T0000050;gene_name=SHOX;ID=start_codon:HG00140_ch_T0000050;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	480913	484359	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG00140_ch_T0000050;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000050;transcript_name=HG00140_ch_T0000050;gene_name=SHOX;ID=intron:HG00140_ch_T0000050:1;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	484360	484568	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG00140_ch_T0000050;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000050;transcript_name=HG00140_ch_T0000050;gene_name=SHOX;ID=exon:HG00140_ch_T0000050:2;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	484360	484568	.	+	2	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG00140_ch_T0000050;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000050;transcript_name=HG00140_ch_T0000050;gene_name=SHOX;ID=CDS:HG00140_ch_T0000050:1;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	484569	490393	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG00140_ch_T0000050;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000050;transcript_name=HG00140_ch_T0000050;gene_name=SHOX;ID=intron:HG00140_ch_T0000050:2;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	490394	490451	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG00140_ch_T0000050;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000050;transcript_name=HG00140_ch_T0000050;gene_name=SHOX;ID=exon:HG00140_ch_T0000050:3;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	490394	490451	.	+	0	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG00140_ch_T0000050;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000050;transcript_name=HG00140_ch_T0000050;gene_name=SHOX;ID=CDS:HG00140_ch_T0000050:2;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	490452	490571	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG00140_ch_T0000050;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000050;transcript_name=HG00140_ch_T0000050;gene_name=SHOX;ID=intron:HG00140_ch_T0000050:3;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	490572	490660	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG00140_ch_T0000050;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000050;transcript_name=HG00140_ch_T0000050;gene_name=SHOX;ID=exon:HG00140_ch_T0000050:4;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	490572	490660	.	+	2	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG00140_ch_T0000050;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000050;transcript_name=HG00140_ch_T0000050;gene_name=SHOX;ID=CDS:HG00140_ch_T0000050:3;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	490661	493963	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG00140_ch_T0000050;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000050;transcript_name=HG00140_ch_T0000050;gene_name=SHOX;ID=intron:HG00140_ch_T0000050:4;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	493964	496396	.	+	.	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG00140_ch_T0000050;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000050;transcript_name=HG00140_ch_T0000050;gene_name=SHOX;ID=exon:HG00140_ch_T0000050:5;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	493964	494209	.	+	0	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG00140_ch_T0000050;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000050;transcript_name=HG00140_ch_T0000050;gene_name=SHOX;ID=CDS:HG00140_ch_T0000050:4;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	494207	494209	.	+	0	source_transcript=ENST00000711145.1;source_transcript_name=SHOX-208;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711145.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711145.1,ENST00000711145.1;transcript_id=HG00140_ch_T0000050;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000050;transcript_name=HG00140_ch_T0000050;gene_name=SHOX;ID=stop_codon:HG00140_ch_T0000050;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	480529	501165	100	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1,ENST00000711142.1;transcript_id=HG00140_ch_T0000051;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_G0000013;transcript_name=HG00140_ch_T0000051;gene_name=SHOX;ID=HG00140_ch_T0000051;Name=SHOX
HG00140_chrY	CAT	exon	480529	480912	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1,ENST00000711142.1;transcript_id=HG00140_ch_T0000051;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000051;transcript_name=HG00140_ch_T0000051;gene_name=SHOX;ID=exon:HG00140_ch_T0000051:0;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	480636	480912	.	+	0	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1,ENST00000711142.1;transcript_id=HG00140_ch_T0000051;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000051;transcript_name=HG00140_ch_T0000051;gene_name=SHOX;ID=CDS:HG00140_ch_T0000051:0;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	480636	480638	.	+	0	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1,ENST00000711142.1;transcript_id=HG00140_ch_T0000051;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000051;transcript_name=HG00140_ch_T0000051;gene_name=SHOX;ID=start_codon:HG00140_ch_T0000051;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	480913	484359	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1,ENST00000711142.1;transcript_id=HG00140_ch_T0000051;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000051;transcript_name=HG00140_ch_T0000051;gene_name=SHOX;ID=intron:HG00140_ch_T0000051:0;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	484360	484568	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1,ENST00000711142.1;transcript_id=HG00140_ch_T0000051;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000051;transcript_name=HG00140_ch_T0000051;gene_name=SHOX;ID=exon:HG00140_ch_T0000051:1;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	484360	484568	.	+	2	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1,ENST00000711142.1;transcript_id=HG00140_ch_T0000051;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000051;transcript_name=HG00140_ch_T0000051;gene_name=SHOX;ID=CDS:HG00140_ch_T0000051:1;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	484569	490393	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1,ENST00000711142.1;transcript_id=HG00140_ch_T0000051;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000051;transcript_name=HG00140_ch_T0000051;gene_name=SHOX;ID=intron:HG00140_ch_T0000051:1;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	490394	490451	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1,ENST00000711142.1;transcript_id=HG00140_ch_T0000051;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000051;transcript_name=HG00140_ch_T0000051;gene_name=SHOX;ID=exon:HG00140_ch_T0000051:2;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	490394	490451	.	+	0	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1,ENST00000711142.1;transcript_id=HG00140_ch_T0000051;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000051;transcript_name=HG00140_ch_T0000051;gene_name=SHOX;ID=CDS:HG00140_ch_T0000051:2;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	490452	490571	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1,ENST00000711142.1;transcript_id=HG00140_ch_T0000051;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000051;transcript_name=HG00140_ch_T0000051;gene_name=SHOX;ID=intron:HG00140_ch_T0000051:2;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	490572	490660	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1,ENST00000711142.1;transcript_id=HG00140_ch_T0000051;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000051;transcript_name=HG00140_ch_T0000051;gene_name=SHOX;ID=exon:HG00140_ch_T0000051:3;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	490572	490660	.	+	2	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1,ENST00000711142.1;transcript_id=HG00140_ch_T0000051;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000051;transcript_name=HG00140_ch_T0000051;gene_name=SHOX;ID=CDS:HG00140_ch_T0000051:3;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	490661	493963	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1,ENST00000711142.1;transcript_id=HG00140_ch_T0000051;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000051;transcript_name=HG00140_ch_T0000051;gene_name=SHOX;ID=intron:HG00140_ch_T0000051:3;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	493964	501165	.	+	.	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1,ENST00000711142.1;transcript_id=HG00140_ch_T0000051;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000051;transcript_name=HG00140_ch_T0000051;gene_name=SHOX;ID=exon:HG00140_ch_T0000051:4;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	493964	494209	.	+	0	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1,ENST00000711142.1;transcript_id=HG00140_ch_T0000051;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000051;transcript_name=HG00140_ch_T0000051;gene_name=SHOX;ID=CDS:HG00140_ch_T0000051:4;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	494207	494209	.	+	0	source_transcript=ENST00000711142.1;source_transcript_name=SHOX-206;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711142.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711142.1,ENST00000711142.1;transcript_id=HG00140_ch_T0000051;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000051;transcript_name=HG00140_ch_T0000051;gene_name=SHOX;ID=stop_codon:HG00140_ch_T0000051;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	480545	509065	100	+	.	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=HG00140_ch_T0000052;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_G0000013;transcript_name=HG00140_ch_T0000052;gene_name=SHOX;ID=HG00140_ch_T0000052;Name=SHOX
HG00140_chrY	CAT	exon	480545	480912	.	+	.	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=HG00140_ch_T0000052;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000052;transcript_name=HG00140_ch_T0000052;gene_name=SHOX;ID=exon:HG00140_ch_T0000052:0;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	480636	480912	.	+	0	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=HG00140_ch_T0000052;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000052;transcript_name=HG00140_ch_T0000052;gene_name=SHOX;ID=CDS:HG00140_ch_T0000052:0;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	480636	480638	.	+	0	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=HG00140_ch_T0000052;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000052;transcript_name=HG00140_ch_T0000052;gene_name=SHOX;ID=start_codon:HG00140_ch_T0000052;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	480913	484359	.	+	.	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=HG00140_ch_T0000052;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000052;transcript_name=HG00140_ch_T0000052;gene_name=SHOX;ID=intron:HG00140_ch_T0000052:0;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	484360	484568	.	+	.	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=HG00140_ch_T0000052;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000052;transcript_name=HG00140_ch_T0000052;gene_name=SHOX;ID=exon:HG00140_ch_T0000052:1;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	484360	484568	.	+	2	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=HG00140_ch_T0000052;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000052;transcript_name=HG00140_ch_T0000052;gene_name=SHOX;ID=CDS:HG00140_ch_T0000052:1;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	484569	490393	.	+	.	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=HG00140_ch_T0000052;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000052;transcript_name=HG00140_ch_T0000052;gene_name=SHOX;ID=intron:HG00140_ch_T0000052:1;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	490394	490451	.	+	.	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=HG00140_ch_T0000052;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000052;transcript_name=HG00140_ch_T0000052;gene_name=SHOX;ID=exon:HG00140_ch_T0000052:2;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	490394	490451	.	+	0	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=HG00140_ch_T0000052;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000052;transcript_name=HG00140_ch_T0000052;gene_name=SHOX;ID=CDS:HG00140_ch_T0000052:2;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	490452	490571	.	+	.	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=HG00140_ch_T0000052;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000052;transcript_name=HG00140_ch_T0000052;gene_name=SHOX;ID=intron:HG00140_ch_T0000052:2;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	490572	490660	.	+	.	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=HG00140_ch_T0000052;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000052;transcript_name=HG00140_ch_T0000052;gene_name=SHOX;ID=exon:HG00140_ch_T0000052:3;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	490572	490660	.	+	2	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=HG00140_ch_T0000052;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000052;transcript_name=HG00140_ch_T0000052;gene_name=SHOX;ID=CDS:HG00140_ch_T0000052:3;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	490661	508438	.	+	.	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=HG00140_ch_T0000052;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000052;transcript_name=HG00140_ch_T0000052;gene_name=SHOX;ID=intron:HG00140_ch_T0000052:3;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	508439	509065	.	+	.	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=HG00140_ch_T0000052;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000052;transcript_name=HG00140_ch_T0000052;gene_name=SHOX;ID=exon:HG00140_ch_T0000052:4;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	508439	508483	.	+	0	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=HG00140_ch_T0000052;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000052;transcript_name=HG00140_ch_T0000052;gene_name=SHOX;ID=CDS:HG00140_ch_T0000052:4;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	508481	508483	.	+	0	source_transcript=ENST00000711141.1;source_transcript_name=SHOX-205;source_gene=ENSG00000292354.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292354.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711141.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=ENST00000711141.1,ENST00000711141.1;transcript_id=HG00140_ch_T0000052;gene_id=HG00140_ch_G0000013;Parent=HG00140_ch_T0000052;transcript_name=HG00140_ch_T0000052;gene_name=SHOX;ID=stop_codon:HG00140_ch_T0000052;Name=SHOX;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	815360	816303	.	-	.	source_gene_common_name=ENSG00000310541;source_gene=ENSG00000310541.1;alternative_source_transcripts=ENST00000850692.1,ENST00000850692.1;gene_id=HG00140_ch_G0000014;gene_biotype=lncRNA;gene_name=ENSG00000310541;gene_sources=liftoff;ID=HG00140_ch_G0000014;Name=ENSG00000310541
HG00140_chrY	CAT	transcript	815360	816303	1000	-	.	source_transcript=ENST00000850692.1;source_transcript_name=ENST00000850692;source_gene=ENSG00000310541.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310541.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850692.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850692.1;transcript_score=298.592;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310541;alternative_source_transcripts=ENST00000850692.1,ENST00000850692.1;transcript_id=HG00140_ch_T0000053;gene_id=HG00140_ch_G0000014;Parent=HG00140_ch_G0000014;transcript_name=HG00140_ch_T0000053;gene_name=ENSG00000310541;ID=HG00140_ch_T0000053;Name=ENSG00000310541
HG00140_chrY	CAT	exon	815360	815688	.	-	.	source_transcript=ENST00000850692.1;source_transcript_name=ENST00000850692;source_gene=ENSG00000310541.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310541.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850692.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850692.1;transcript_score=298.592;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310541;alternative_source_transcripts=ENST00000850692.1,ENST00000850692.1;transcript_id=HG00140_ch_T0000053;gene_id=HG00140_ch_G0000014;Parent=HG00140_ch_T0000053;transcript_name=HG00140_ch_T0000053;gene_name=ENSG00000310541;ID=exon:HG00140_ch_T0000053:0;Name=ENSG00000310541;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	815689	816206	.	-	.	source_transcript=ENST00000850692.1;source_transcript_name=ENST00000850692;source_gene=ENSG00000310541.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310541.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850692.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850692.1;transcript_score=298.592;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310541;alternative_source_transcripts=ENST00000850692.1,ENST00000850692.1;transcript_id=HG00140_ch_T0000053;gene_id=HG00140_ch_G0000014;Parent=HG00140_ch_T0000053;transcript_name=HG00140_ch_T0000053;gene_name=ENSG00000310541;ID=intron:HG00140_ch_T0000053:0;Name=ENSG00000310541;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	816207	816303	.	-	.	source_transcript=ENST00000850692.1;source_transcript_name=ENST00000850692;source_gene=ENSG00000310541.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310541.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850692.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850692.1;transcript_score=298.592;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310541;alternative_source_transcripts=ENST00000850692.1,ENST00000850692.1;transcript_id=HG00140_ch_T0000053;gene_id=HG00140_ch_G0000014;Parent=HG00140_ch_T0000053;transcript_name=HG00140_ch_T0000053;gene_name=ENSG00000310541;ID=exon:HG00140_ch_T0000053:1;Name=ENSG00000310541;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	841318	846388	.	+	.	source_gene_common_name=ENSG00000292335;source_gene=ENSG00000292335.2;alternative_source_transcripts=ENST00000850729.1,ENST00000850729.1;gene_id=HG00140_ch_G0000015;gene_biotype=lncRNA;gene_name=ENSG00000292335;gene_sources=liftoff;ID=HG00140_ch_G0000015;Name=ENSG00000292335
HG00140_chrY	CAT	transcript	841318	846380	1000	+	.	source_transcript=ENST00000850729.1;source_transcript_name=ENST00000850729;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850729.1;transcript_score=299.871;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850729.1,ENST00000850729.1;transcript_id=HG00140_ch_T0000054;gene_id=HG00140_ch_G0000015;Parent=HG00140_ch_G0000015;transcript_name=HG00140_ch_T0000054;gene_name=ENSG00000292335;ID=HG00140_ch_T0000054;Name=ENSG00000292335
HG00140_chrY	CAT	exon	841318	841649	.	+	.	source_transcript=ENST00000850729.1;source_transcript_name=ENST00000850729;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850729.1;transcript_score=299.871;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850729.1,ENST00000850729.1;transcript_id=HG00140_ch_T0000054;gene_id=HG00140_ch_G0000015;Parent=HG00140_ch_T0000054;transcript_name=HG00140_ch_T0000054;gene_name=ENSG00000292335;ID=exon:HG00140_ch_T0000054:0;Name=ENSG00000292335;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	841650	845379	.	+	.	source_transcript=ENST00000850729.1;source_transcript_name=ENST00000850729;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850729.1;transcript_score=299.871;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850729.1,ENST00000850729.1;transcript_id=HG00140_ch_T0000054;gene_id=HG00140_ch_G0000015;Parent=HG00140_ch_T0000054;transcript_name=HG00140_ch_T0000054;gene_name=ENSG00000292335;ID=intron:HG00140_ch_T0000054:0;Name=ENSG00000292335;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	845380	845443	.	+	.	source_transcript=ENST00000850729.1;source_transcript_name=ENST00000850729;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850729.1;transcript_score=299.871;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850729.1,ENST00000850729.1;transcript_id=HG00140_ch_T0000054;gene_id=HG00140_ch_G0000015;Parent=HG00140_ch_T0000054;transcript_name=HG00140_ch_T0000054;gene_name=ENSG00000292335;ID=exon:HG00140_ch_T0000054:1;Name=ENSG00000292335;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	845444	845998	.	+	.	source_transcript=ENST00000850729.1;source_transcript_name=ENST00000850729;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850729.1;transcript_score=299.871;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850729.1,ENST00000850729.1;transcript_id=HG00140_ch_T0000054;gene_id=HG00140_ch_G0000015;Parent=HG00140_ch_T0000054;transcript_name=HG00140_ch_T0000054;gene_name=ENSG00000292335;ID=intron:HG00140_ch_T0000054:1;Name=ENSG00000292335;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	845999	846380	.	+	.	source_transcript=ENST00000850729.1;source_transcript_name=ENST00000850729;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850729.1;transcript_score=299.871;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850729.1,ENST00000850729.1;transcript_id=HG00140_ch_T0000054;gene_id=HG00140_ch_G0000015;Parent=HG00140_ch_T0000054;transcript_name=HG00140_ch_T0000054;gene_name=ENSG00000292335;ID=exon:HG00140_ch_T0000054:2;Name=ENSG00000292335;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	841363	846380	1000	+	.	source_transcript=ENST00000850730.1;source_transcript_name=ENST00000850730;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850730.1;transcript_score=299.851;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850730.1,ENST00000850730.1;transcript_id=HG00140_ch_T0000055;gene_id=HG00140_ch_G0000015;Parent=HG00140_ch_G0000015;transcript_name=HG00140_ch_T0000055;gene_name=ENSG00000292335;ID=HG00140_ch_T0000055;Name=ENSG00000292335
HG00140_chrY	CAT	exon	841363	841649	.	+	.	source_transcript=ENST00000850730.1;source_transcript_name=ENST00000850730;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850730.1;transcript_score=299.851;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850730.1,ENST00000850730.1;transcript_id=HG00140_ch_T0000055;gene_id=HG00140_ch_G0000015;Parent=HG00140_ch_T0000055;transcript_name=HG00140_ch_T0000055;gene_name=ENSG00000292335;ID=exon:HG00140_ch_T0000055:0;Name=ENSG00000292335;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	841650	845998	.	+	.	source_transcript=ENST00000850730.1;source_transcript_name=ENST00000850730;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850730.1;transcript_score=299.851;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850730.1,ENST00000850730.1;transcript_id=HG00140_ch_T0000055;gene_id=HG00140_ch_G0000015;Parent=HG00140_ch_T0000055;transcript_name=HG00140_ch_T0000055;gene_name=ENSG00000292335;ID=intron:HG00140_ch_T0000055:0;Name=ENSG00000292335;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	845999	846380	.	+	.	source_transcript=ENST00000850730.1;source_transcript_name=ENST00000850730;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850730.1;transcript_score=299.851;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850730.1,ENST00000850730.1;transcript_id=HG00140_ch_T0000055;gene_id=HG00140_ch_G0000015;Parent=HG00140_ch_T0000055;transcript_name=HG00140_ch_T0000055;gene_name=ENSG00000292335;ID=exon:HG00140_ch_T0000055:1;Name=ENSG00000292335;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	841398	846380	1000	+	.	source_transcript=ENST00000850731.1;source_transcript_name=ENST00000850731;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850731.1;transcript_score=299.856;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850731.1,ENST00000850731.1;transcript_id=HG00140_ch_T0000056;gene_id=HG00140_ch_G0000015;Parent=HG00140_ch_G0000015;transcript_name=HG00140_ch_T0000056;gene_name=ENSG00000292335;ID=HG00140_ch_T0000056;Name=ENSG00000292335
HG00140_chrY	CAT	exon	841398	841644	.	+	.	source_transcript=ENST00000850731.1;source_transcript_name=ENST00000850731;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850731.1;transcript_score=299.856;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850731.1,ENST00000850731.1;transcript_id=HG00140_ch_T0000056;gene_id=HG00140_ch_G0000015;Parent=HG00140_ch_T0000056;transcript_name=HG00140_ch_T0000056;gene_name=ENSG00000292335;ID=exon:HG00140_ch_T0000056:0;Name=ENSG00000292335;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	841645	845379	.	+	.	source_transcript=ENST00000850731.1;source_transcript_name=ENST00000850731;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850731.1;transcript_score=299.856;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850731.1,ENST00000850731.1;transcript_id=HG00140_ch_T0000056;gene_id=HG00140_ch_G0000015;Parent=HG00140_ch_T0000056;transcript_name=HG00140_ch_T0000056;gene_name=ENSG00000292335;ID=intron:HG00140_ch_T0000056:0;Name=ENSG00000292335;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	845380	845443	.	+	.	source_transcript=ENST00000850731.1;source_transcript_name=ENST00000850731;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850731.1;transcript_score=299.856;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850731.1,ENST00000850731.1;transcript_id=HG00140_ch_T0000056;gene_id=HG00140_ch_G0000015;Parent=HG00140_ch_T0000056;transcript_name=HG00140_ch_T0000056;gene_name=ENSG00000292335;ID=exon:HG00140_ch_T0000056:1;Name=ENSG00000292335;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	845444	845998	.	+	.	source_transcript=ENST00000850731.1;source_transcript_name=ENST00000850731;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850731.1;transcript_score=299.856;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850731.1,ENST00000850731.1;transcript_id=HG00140_ch_T0000056;gene_id=HG00140_ch_G0000015;Parent=HG00140_ch_T0000056;transcript_name=HG00140_ch_T0000056;gene_name=ENSG00000292335;ID=intron:HG00140_ch_T0000056:1;Name=ENSG00000292335;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	845999	846380	.	+	.	source_transcript=ENST00000850731.1;source_transcript_name=ENST00000850731;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850731.1;transcript_score=299.856;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850731.1,ENST00000850731.1;transcript_id=HG00140_ch_T0000056;gene_id=HG00140_ch_G0000015;Parent=HG00140_ch_T0000056;transcript_name=HG00140_ch_T0000056;gene_name=ENSG00000292335;ID=exon:HG00140_ch_T0000056:2;Name=ENSG00000292335;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	841413	846388	1000	+	.	source_transcript=ENST00000850826.1;source_transcript_name=ENST00000850826;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850826.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850826.1;transcript_score=299.839;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850826.1,ENST00000850826.1;transcript_id=HG00140_ch_T0000057;gene_id=HG00140_ch_G0000015;Parent=HG00140_ch_G0000015;transcript_name=HG00140_ch_T0000057;gene_name=ENSG00000292335;ID=HG00140_ch_T0000057;Name=ENSG00000292335
HG00140_chrY	CAT	exon	841413	841644	.	+	.	source_transcript=ENST00000850826.1;source_transcript_name=ENST00000850826;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850826.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850826.1;transcript_score=299.839;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850826.1,ENST00000850826.1;transcript_id=HG00140_ch_T0000057;gene_id=HG00140_ch_G0000015;Parent=HG00140_ch_T0000057;transcript_name=HG00140_ch_T0000057;gene_name=ENSG00000292335;ID=exon:HG00140_ch_T0000057:0;Name=ENSG00000292335;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	841645	845998	.	+	.	source_transcript=ENST00000850826.1;source_transcript_name=ENST00000850826;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850826.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850826.1;transcript_score=299.839;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850826.1,ENST00000850826.1;transcript_id=HG00140_ch_T0000057;gene_id=HG00140_ch_G0000015;Parent=HG00140_ch_T0000057;transcript_name=HG00140_ch_T0000057;gene_name=ENSG00000292335;ID=intron:HG00140_ch_T0000057:0;Name=ENSG00000292335;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	845999	846388	.	+	.	source_transcript=ENST00000850826.1;source_transcript_name=ENST00000850826;source_gene=ENSG00000292335.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292335.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850826.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850826.1;transcript_score=299.839;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292335;alternative_source_transcripts=ENST00000850826.1,ENST00000850826.1;transcript_id=HG00140_ch_T0000057;gene_id=HG00140_ch_G0000015;Parent=HG00140_ch_T0000057;transcript_name=HG00140_ch_T0000057;gene_name=ENSG00000292335;ID=exon:HG00140_ch_T0000057:1;Name=ENSG00000292335;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	860523	862121	.	-	.	source_gene_common_name=RPL14P5;source_gene=ENSG00000292328.1;alternative_source_transcripts=ENST00000711122.1,ENST00000711122.1;gene_id=HG00140_ch_G0000016;gene_biotype=processed_pseudogene;gene_name=RPL14P5;gene_sources=liftoff;ID=HG00140_ch_G0000016;Name=RPL14P5
HG00140_chrY	CAT	transcript	860523	862121	1000	-	.	source_transcript=ENST00000711122.1;source_transcript_name=RPL14P5-202;source_gene=ENSG00000292328.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292328.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711122.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711122.1;transcript_score=299.863;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPL14P5;alternative_source_transcripts=ENST00000711122.1,ENST00000711122.1;transcript_id=HG00140_ch_T0000058;gene_id=HG00140_ch_G0000016;Parent=HG00140_ch_G0000016;transcript_name=HG00140_ch_T0000058;gene_name=RPL14P5;ID=HG00140_ch_T0000058;Name=RPL14P5
HG00140_chrY	CAT	exon	860523	860571	.	-	.	source_transcript=ENST00000711122.1;source_transcript_name=RPL14P5-202;source_gene=ENSG00000292328.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292328.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711122.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711122.1;transcript_score=299.863;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPL14P5;alternative_source_transcripts=ENST00000711122.1,ENST00000711122.1;transcript_id=HG00140_ch_T0000058;gene_id=HG00140_ch_G0000016;Parent=HG00140_ch_T0000058;transcript_name=HG00140_ch_T0000058;gene_name=RPL14P5;ID=exon:HG00140_ch_T0000058:0;Name=RPL14P5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	860572	861111	.	-	.	source_transcript=ENST00000711122.1;source_transcript_name=RPL14P5-202;source_gene=ENSG00000292328.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292328.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711122.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711122.1;transcript_score=299.863;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPL14P5;alternative_source_transcripts=ENST00000711122.1,ENST00000711122.1;transcript_id=HG00140_ch_T0000058;gene_id=HG00140_ch_G0000016;Parent=HG00140_ch_T0000058;transcript_name=HG00140_ch_T0000058;gene_name=RPL14P5;ID=intron:HG00140_ch_T0000058:0;Name=RPL14P5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	861112	861400	.	-	.	source_transcript=ENST00000711122.1;source_transcript_name=RPL14P5-202;source_gene=ENSG00000292328.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292328.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711122.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711122.1;transcript_score=299.863;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPL14P5;alternative_source_transcripts=ENST00000711122.1,ENST00000711122.1;transcript_id=HG00140_ch_T0000058;gene_id=HG00140_ch_G0000016;Parent=HG00140_ch_T0000058;transcript_name=HG00140_ch_T0000058;gene_name=RPL14P5;ID=exon:HG00140_ch_T0000058:1;Name=RPL14P5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	861401	861729	.	-	.	source_transcript=ENST00000711122.1;source_transcript_name=RPL14P5-202;source_gene=ENSG00000292328.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292328.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711122.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711122.1;transcript_score=299.863;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPL14P5;alternative_source_transcripts=ENST00000711122.1,ENST00000711122.1;transcript_id=HG00140_ch_T0000058;gene_id=HG00140_ch_G0000016;Parent=HG00140_ch_T0000058;transcript_name=HG00140_ch_T0000058;gene_name=RPL14P5;ID=intron:HG00140_ch_T0000058:1;Name=RPL14P5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	861730	862121	.	-	.	source_transcript=ENST00000711122.1;source_transcript_name=RPL14P5-202;source_gene=ENSG00000292328.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292328.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711122.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711122.1;transcript_score=299.863;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPL14P5;alternative_source_transcripts=ENST00000711122.1,ENST00000711122.1;transcript_id=HG00140_ch_T0000058;gene_id=HG00140_ch_G0000016;Parent=HG00140_ch_T0000058;transcript_name=HG00140_ch_T0000058;gene_name=RPL14P5;ID=exon:HG00140_ch_T0000058:2;Name=RPL14P5;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	966724	967704	.	+	.	source_gene_common_name=ENSG00000310548;source_gene=ENSG00000310548.1;alternative_source_transcripts=ENST00000850715.1,ENST00000850715.1;gene_id=HG00140_ch_G0000017;gene_biotype=lncRNA;gene_name=ENSG00000310548;gene_sources=liftoff;ID=HG00140_ch_G0000017;Name=ENSG00000310548
HG00140_chrY	CAT	transcript	966724	967704	1000	+	.	source_transcript=ENST00000850715.1;source_transcript_name=ENST00000850715;source_gene=ENSG00000310548.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310548.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850715.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310548;alternative_source_transcripts=ENST00000850715.1,ENST00000850715.1;transcript_id=HG00140_ch_T0000059;gene_id=HG00140_ch_G0000017;Parent=HG00140_ch_G0000017;transcript_name=HG00140_ch_T0000059;gene_name=ENSG00000310548;ID=HG00140_ch_T0000059;Name=ENSG00000310548
HG00140_chrY	CAT	exon	966724	966849	.	+	.	source_transcript=ENST00000850715.1;source_transcript_name=ENST00000850715;source_gene=ENSG00000310548.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310548.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310548;alternative_source_transcripts=ENST00000850715.1,ENST00000850715.1;transcript_id=HG00140_ch_T0000059;gene_id=HG00140_ch_G0000017;Parent=HG00140_ch_T0000059;transcript_name=HG00140_ch_T0000059;gene_name=ENSG00000310548;ID=exon:HG00140_ch_T0000059:0;Name=ENSG00000310548;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	966850	966983	.	+	.	source_transcript=ENST00000850715.1;source_transcript_name=ENST00000850715;source_gene=ENSG00000310548.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310548.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310548;alternative_source_transcripts=ENST00000850715.1,ENST00000850715.1;transcript_id=HG00140_ch_T0000059;gene_id=HG00140_ch_G0000017;Parent=HG00140_ch_T0000059;transcript_name=HG00140_ch_T0000059;gene_name=ENSG00000310548;ID=intron:HG00140_ch_T0000059:0;Name=ENSG00000310548;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	966984	967704	.	+	.	source_transcript=ENST00000850715.1;source_transcript_name=ENST00000850715;source_gene=ENSG00000310548.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310548.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310548;alternative_source_transcripts=ENST00000850715.1,ENST00000850715.1;transcript_id=HG00140_ch_T0000059;gene_id=HG00140_ch_G0000017;Parent=HG00140_ch_T0000059;transcript_name=HG00140_ch_T0000059;gene_name=ENSG00000310548;ID=exon:HG00140_ch_T0000059:1;Name=ENSG00000310548;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	1026864	1037737	.	+	.	source_gene_common_name=ENSG00000310556;source_gene=ENSG00000310556.1;alternative_source_transcripts=ENST00000850736.1,ENST00000850736.1;gene_id=HG00140_ch_G0000018;gene_biotype=lncRNA;gene_name=ENSG00000310556;gene_sources=liftoff;ID=HG00140_ch_G0000018;Name=ENSG00000310556
HG00140_chrY	CAT	transcript	1026864	1031180	1000	+	.	source_transcript=ENST00000850736.1;source_transcript_name=ENST00000850736;source_gene=ENSG00000310556.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310556.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850736.1;transcript_score=299.712;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310556;alternative_source_transcripts=ENST00000850736.1,ENST00000850736.1;transcript_id=HG00140_ch_T0000060;gene_id=HG00140_ch_G0000018;Parent=HG00140_ch_G0000018;transcript_name=HG00140_ch_T0000060;gene_name=ENSG00000310556;ID=HG00140_ch_T0000060;Name=ENSG00000310556
HG00140_chrY	CAT	exon	1026864	1026950	.	+	.	source_transcript=ENST00000850736.1;source_transcript_name=ENST00000850736;source_gene=ENSG00000310556.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310556.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850736.1;transcript_score=299.712;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310556;alternative_source_transcripts=ENST00000850736.1,ENST00000850736.1;transcript_id=HG00140_ch_T0000060;gene_id=HG00140_ch_G0000018;Parent=HG00140_ch_T0000060;transcript_name=HG00140_ch_T0000060;gene_name=ENSG00000310556;ID=exon:HG00140_ch_T0000060:0;Name=ENSG00000310556;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1026951	1030224	.	+	.	source_transcript=ENST00000850736.1;source_transcript_name=ENST00000850736;source_gene=ENSG00000310556.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310556.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850736.1;transcript_score=299.712;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310556;alternative_source_transcripts=ENST00000850736.1,ENST00000850736.1;transcript_id=HG00140_ch_T0000060;gene_id=HG00140_ch_G0000018;Parent=HG00140_ch_T0000060;transcript_name=HG00140_ch_T0000060;gene_name=ENSG00000310556;ID=intron:HG00140_ch_T0000060:0;Name=ENSG00000310556;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1030225	1031180	.	+	.	source_transcript=ENST00000850736.1;source_transcript_name=ENST00000850736;source_gene=ENSG00000310556.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310556.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850736.1;transcript_score=299.712;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310556;alternative_source_transcripts=ENST00000850736.1,ENST00000850736.1;transcript_id=HG00140_ch_T0000060;gene_id=HG00140_ch_G0000018;Parent=HG00140_ch_T0000060;transcript_name=HG00140_ch_T0000060;gene_name=ENSG00000310556;ID=exon:HG00140_ch_T0000060:1;Name=ENSG00000310556;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1026892	1037737	1000	+	.	source_transcript=ENST00000850735.1;source_transcript_name=ENST00000850735;source_gene=ENSG00000310556.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310556.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850735.1;transcript_score=299.848;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310556;alternative_source_transcripts=ENST00000850735.1,ENST00000850735.1;transcript_id=HG00140_ch_T0000061;gene_id=HG00140_ch_G0000018;Parent=HG00140_ch_G0000018;transcript_name=HG00140_ch_T0000061;gene_name=ENSG00000310556;ID=HG00140_ch_T0000061;Name=ENSG00000310556
HG00140_chrY	CAT	exon	1026892	1026950	.	+	.	source_transcript=ENST00000850735.1;source_transcript_name=ENST00000850735;source_gene=ENSG00000310556.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310556.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850735.1;transcript_score=299.848;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310556;alternative_source_transcripts=ENST00000850735.1,ENST00000850735.1;transcript_id=HG00140_ch_T0000061;gene_id=HG00140_ch_G0000018;Parent=HG00140_ch_T0000061;transcript_name=HG00140_ch_T0000061;gene_name=ENSG00000310556;ID=exon:HG00140_ch_T0000061:0;Name=ENSG00000310556;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1026951	1030224	.	+	.	source_transcript=ENST00000850735.1;source_transcript_name=ENST00000850735;source_gene=ENSG00000310556.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310556.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850735.1;transcript_score=299.848;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310556;alternative_source_transcripts=ENST00000850735.1,ENST00000850735.1;transcript_id=HG00140_ch_T0000061;gene_id=HG00140_ch_G0000018;Parent=HG00140_ch_T0000061;transcript_name=HG00140_ch_T0000061;gene_name=ENSG00000310556;ID=intron:HG00140_ch_T0000061:0;Name=ENSG00000310556;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1030225	1030560	.	+	.	source_transcript=ENST00000850735.1;source_transcript_name=ENST00000850735;source_gene=ENSG00000310556.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310556.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850735.1;transcript_score=299.848;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310556;alternative_source_transcripts=ENST00000850735.1,ENST00000850735.1;transcript_id=HG00140_ch_T0000061;gene_id=HG00140_ch_G0000018;Parent=HG00140_ch_T0000061;transcript_name=HG00140_ch_T0000061;gene_name=ENSG00000310556;ID=exon:HG00140_ch_T0000061:1;Name=ENSG00000310556;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1030561	1037474	.	+	.	source_transcript=ENST00000850735.1;source_transcript_name=ENST00000850735;source_gene=ENSG00000310556.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310556.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850735.1;transcript_score=299.848;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310556;alternative_source_transcripts=ENST00000850735.1,ENST00000850735.1;transcript_id=HG00140_ch_T0000061;gene_id=HG00140_ch_G0000018;Parent=HG00140_ch_T0000061;transcript_name=HG00140_ch_T0000061;gene_name=ENSG00000310556;ID=intron:HG00140_ch_T0000061:1;Name=ENSG00000310556;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1037475	1037737	.	+	.	source_transcript=ENST00000850735.1;source_transcript_name=ENST00000850735;source_gene=ENSG00000310556.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310556.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850735.1;transcript_score=299.848;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310556;alternative_source_transcripts=ENST00000850735.1,ENST00000850735.1;transcript_id=HG00140_ch_T0000061;gene_id=HG00140_ch_G0000018;Parent=HG00140_ch_T0000061;transcript_name=HG00140_ch_T0000061;gene_name=ENSG00000310556;ID=exon:HG00140_ch_T0000061:2;Name=ENSG00000310556;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	1048559	1071412	.	-	.	source_gene_common_name=CRLF2;source_gene=ENSG00000292363.1;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;gene_id=HG00140_ch_G0000019;gene_biotype=protein_coding;gene_name=CRLF2;gene_sources=liftoff;ID=HG00140_ch_G0000019;Name=CRLF2
HG00140_chrY	CAT	transcript	1048559	1071338	100	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00140_ch_T0000062;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_G0000019;transcript_name=HG00140_ch_T0000062;gene_name=CRLF2;ID=HG00140_ch_T0000062;Name=CRLF2
HG00140_chrY	CAT	exon	1048559	1049229	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00140_ch_T0000062;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000062;transcript_name=HG00140_ch_T0000062;gene_name=CRLF2;ID=exon:HG00140_ch_T0000062:0;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1048966	1049229	.	-	0	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00140_ch_T0000062;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000062;transcript_name=HG00140_ch_T0000062;gene_name=CRLF2;ID=CDS:HG00140_ch_T0000062:0;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	1048966	1048968	.	-	0	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00140_ch_T0000062;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000062;transcript_name=HG00140_ch_T0000062;gene_name=CRLF2;ID=stop_codon:HG00140_ch_T0000062;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1049230	1051311	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00140_ch_T0000062;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000062;transcript_name=HG00140_ch_T0000062;gene_name=CRLF2;ID=intron:HG00140_ch_T0000062:0;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1051312	1051396	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00140_ch_T0000062;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000062;transcript_name=HG00140_ch_T0000062;gene_name=CRLF2;ID=exon:HG00140_ch_T0000062:1;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1051312	1051396	.	-	1	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00140_ch_T0000062;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000062;transcript_name=HG00140_ch_T0000062;gene_name=CRLF2;ID=CDS:HG00140_ch_T0000062:1;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1051397	1054880	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00140_ch_T0000062;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000062;transcript_name=HG00140_ch_T0000062;gene_name=CRLF2;ID=intron:HG00140_ch_T0000062:1;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1054881	1055001	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00140_ch_T0000062;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000062;transcript_name=HG00140_ch_T0000062;gene_name=CRLF2;ID=exon:HG00140_ch_T0000062:2;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1054881	1055001	.	-	2	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00140_ch_T0000062;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000062;transcript_name=HG00140_ch_T0000062;gene_name=CRLF2;ID=CDS:HG00140_ch_T0000062:2;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1055002	1057222	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00140_ch_T0000062;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000062;transcript_name=HG00140_ch_T0000062;gene_name=CRLF2;ID=intron:HG00140_ch_T0000062:2;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1057223	1057385	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00140_ch_T0000062;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000062;transcript_name=HG00140_ch_T0000062;gene_name=CRLF2;ID=exon:HG00140_ch_T0000062:3;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1057223	1057385	.	-	0	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00140_ch_T0000062;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000062;transcript_name=HG00140_ch_T0000062;gene_name=CRLF2;ID=CDS:HG00140_ch_T0000062:3;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1057386	1061063	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00140_ch_T0000062;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000062;transcript_name=HG00140_ch_T0000062;gene_name=CRLF2;ID=intron:HG00140_ch_T0000062:3;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1061064	1061197	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00140_ch_T0000062;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000062;transcript_name=HG00140_ch_T0000062;gene_name=CRLF2;ID=exon:HG00140_ch_T0000062:4;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1061064	1061197	.	-	2	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00140_ch_T0000062;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000062;transcript_name=HG00140_ch_T0000062;gene_name=CRLF2;ID=CDS:HG00140_ch_T0000062:4;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1061198	1065121	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00140_ch_T0000062;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000062;transcript_name=HG00140_ch_T0000062;gene_name=CRLF2;ID=intron:HG00140_ch_T0000062:4;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1065122	1065288	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00140_ch_T0000062;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000062;transcript_name=HG00140_ch_T0000062;gene_name=CRLF2;ID=exon:HG00140_ch_T0000062:5;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1065122	1065288	.	-	1	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00140_ch_T0000062;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000062;transcript_name=HG00140_ch_T0000062;gene_name=CRLF2;ID=CDS:HG00140_ch_T0000062:5;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1065289	1067491	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00140_ch_T0000062;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000062;transcript_name=HG00140_ch_T0000062;gene_name=CRLF2;ID=intron:HG00140_ch_T0000062:5;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1067492	1067594	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00140_ch_T0000062;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000062;transcript_name=HG00140_ch_T0000062;gene_name=CRLF2;ID=exon:HG00140_ch_T0000062:6;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1067492	1067594	.	-	2	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00140_ch_T0000062;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000062;transcript_name=HG00140_ch_T0000062;gene_name=CRLF2;ID=CDS:HG00140_ch_T0000062:6;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1067595	1071244	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00140_ch_T0000062;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000062;transcript_name=HG00140_ch_T0000062;gene_name=CRLF2;ID=intron:HG00140_ch_T0000062:6;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1071245	1071338	.	-	.	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00140_ch_T0000062;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000062;transcript_name=HG00140_ch_T0000062;gene_name=CRLF2;ID=exon:HG00140_ch_T0000062:7;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1071245	1071323	.	-	0	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00140_ch_T0000062;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000062;transcript_name=HG00140_ch_T0000062;gene_name=CRLF2;ID=CDS:HG00140_ch_T0000062:7;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	1071321	1071323	.	-	0	source_transcript=ENST00000711254.1;source_transcript_name=CRLF2-204;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711254.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711254.1,ENST00000711254.1;transcript_id=HG00140_ch_T0000062;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000062;transcript_name=HG00140_ch_T0000062;gene_name=CRLF2;ID=start_codon:HG00140_ch_T0000062;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1048561	1071412	1000	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.832;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG00140_ch_T0000063;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_G0000019;transcript_name=HG00140_ch_T0000063;gene_name=CRLF2;ID=HG00140_ch_T0000063;Name=CRLF2
HG00140_chrY	CAT	exon	1048561	1049229	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.832;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG00140_ch_T0000063;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000063;transcript_name=HG00140_ch_T0000063;gene_name=CRLF2;ID=exon:HG00140_ch_T0000063:0;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1049230	1051311	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.832;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG00140_ch_T0000063;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000063;transcript_name=HG00140_ch_T0000063;gene_name=CRLF2;ID=intron:HG00140_ch_T0000063:0;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1051312	1051396	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.832;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG00140_ch_T0000063;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000063;transcript_name=HG00140_ch_T0000063;gene_name=CRLF2;ID=exon:HG00140_ch_T0000063:1;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1051397	1054880	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.832;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG00140_ch_T0000063;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000063;transcript_name=HG00140_ch_T0000063;gene_name=CRLF2;ID=intron:HG00140_ch_T0000063:1;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1054881	1055001	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.832;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG00140_ch_T0000063;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000063;transcript_name=HG00140_ch_T0000063;gene_name=CRLF2;ID=exon:HG00140_ch_T0000063:2;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1055002	1057469	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.832;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG00140_ch_T0000063;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000063;transcript_name=HG00140_ch_T0000063;gene_name=CRLF2;ID=intron:HG00140_ch_T0000063:2;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1057470	1057814	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.832;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG00140_ch_T0000063;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000063;transcript_name=HG00140_ch_T0000063;gene_name=CRLF2;ID=exon:HG00140_ch_T0000063:3;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1057596	1057814	.	-	0	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.832;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG00140_ch_T0000063;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000063;transcript_name=HG00140_ch_T0000063;gene_name=CRLF2;ID=CDS:HG00140_ch_T0000063:0;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	1057596	1057598	.	-	0	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.832;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG00140_ch_T0000063;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000063;transcript_name=HG00140_ch_T0000063;gene_name=CRLF2;ID=stop_codon:HG00140_ch_T0000063;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1057815	1061063	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.832;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG00140_ch_T0000063;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000063;transcript_name=HG00140_ch_T0000063;gene_name=CRLF2;ID=intron:HG00140_ch_T0000063:3;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1061064	1061197	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.832;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG00140_ch_T0000063;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000063;transcript_name=HG00140_ch_T0000063;gene_name=CRLF2;ID=exon:HG00140_ch_T0000063:4;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1061064	1061197	.	-	2	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.832;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG00140_ch_T0000063;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000063;transcript_name=HG00140_ch_T0000063;gene_name=CRLF2;ID=CDS:HG00140_ch_T0000063:1;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1061198	1065121	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.832;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG00140_ch_T0000063;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000063;transcript_name=HG00140_ch_T0000063;gene_name=CRLF2;ID=intron:HG00140_ch_T0000063:4;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1065122	1065288	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.832;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG00140_ch_T0000063;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000063;transcript_name=HG00140_ch_T0000063;gene_name=CRLF2;ID=exon:HG00140_ch_T0000063:5;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1065122	1065288	.	-	1	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.832;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG00140_ch_T0000063;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000063;transcript_name=HG00140_ch_T0000063;gene_name=CRLF2;ID=CDS:HG00140_ch_T0000063:2;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1065289	1067491	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.832;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG00140_ch_T0000063;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000063;transcript_name=HG00140_ch_T0000063;gene_name=CRLF2;ID=intron:HG00140_ch_T0000063:5;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1067492	1067591	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.832;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG00140_ch_T0000063;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000063;transcript_name=HG00140_ch_T0000063;gene_name=CRLF2;ID=exon:HG00140_ch_T0000063:6;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1067492	1067591	.	-	2	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.832;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG00140_ch_T0000063;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000063;transcript_name=HG00140_ch_T0000063;gene_name=CRLF2;ID=CDS:HG00140_ch_T0000063:3;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1067592	1071244	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.832;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG00140_ch_T0000063;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000063;transcript_name=HG00140_ch_T0000063;gene_name=CRLF2;ID=intron:HG00140_ch_T0000063:6;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1071245	1071412	.	-	.	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.832;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG00140_ch_T0000063;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000063;transcript_name=HG00140_ch_T0000063;gene_name=CRLF2;ID=exon:HG00140_ch_T0000063:7;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1071245	1071323	.	-	0	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.832;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG00140_ch_T0000063;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000063;transcript_name=HG00140_ch_T0000063;gene_name=CRLF2;ID=CDS:HG00140_ch_T0000063:4;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	1071321	1071323	.	-	0	source_transcript=ENST00000711255.1;source_transcript_name=CRLF2-205;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711255.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711255.1;transcript_score=299.832;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711255.1,ENST00000711255.1;transcript_id=HG00140_ch_T0000063;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000063;transcript_name=HG00140_ch_T0000063;gene_name=CRLF2;ID=start_codon:HG00140_ch_T0000063;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1048966	1071323	100	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG00140_ch_T0000064;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_G0000019;transcript_name=HG00140_ch_T0000064;gene_name=CRLF2;ID=HG00140_ch_T0000064;Name=CRLF2
HG00140_chrY	CAT	exon	1048966	1049229	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG00140_ch_T0000064;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000064;transcript_name=HG00140_ch_T0000064;gene_name=CRLF2;ID=exon:HG00140_ch_T0000064:0;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1048966	1049229	.	-	0	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG00140_ch_T0000064;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000064;transcript_name=HG00140_ch_T0000064;gene_name=CRLF2;ID=CDS:HG00140_ch_T0000064:0;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	1048966	1048968	.	-	0	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG00140_ch_T0000064;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000064;transcript_name=HG00140_ch_T0000064;gene_name=CRLF2;ID=stop_codon:HG00140_ch_T0000064;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1049230	1051311	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG00140_ch_T0000064;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000064;transcript_name=HG00140_ch_T0000064;gene_name=CRLF2;ID=intron:HG00140_ch_T0000064:0;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1051312	1051396	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG00140_ch_T0000064;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000064;transcript_name=HG00140_ch_T0000064;gene_name=CRLF2;ID=exon:HG00140_ch_T0000064:1;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1051312	1051396	.	-	1	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG00140_ch_T0000064;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000064;transcript_name=HG00140_ch_T0000064;gene_name=CRLF2;ID=CDS:HG00140_ch_T0000064:1;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1051397	1054880	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG00140_ch_T0000064;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000064;transcript_name=HG00140_ch_T0000064;gene_name=CRLF2;ID=intron:HG00140_ch_T0000064:1;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1054881	1055001	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG00140_ch_T0000064;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000064;transcript_name=HG00140_ch_T0000064;gene_name=CRLF2;ID=exon:HG00140_ch_T0000064:2;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1054881	1055001	.	-	2	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG00140_ch_T0000064;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000064;transcript_name=HG00140_ch_T0000064;gene_name=CRLF2;ID=CDS:HG00140_ch_T0000064:2;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1055002	1057222	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG00140_ch_T0000064;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000064;transcript_name=HG00140_ch_T0000064;gene_name=CRLF2;ID=intron:HG00140_ch_T0000064:2;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1057223	1057385	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG00140_ch_T0000064;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000064;transcript_name=HG00140_ch_T0000064;gene_name=CRLF2;ID=exon:HG00140_ch_T0000064:3;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1057223	1057385	.	-	0	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG00140_ch_T0000064;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000064;transcript_name=HG00140_ch_T0000064;gene_name=CRLF2;ID=CDS:HG00140_ch_T0000064:3;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1057386	1061063	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG00140_ch_T0000064;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000064;transcript_name=HG00140_ch_T0000064;gene_name=CRLF2;ID=intron:HG00140_ch_T0000064:3;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1061064	1061197	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG00140_ch_T0000064;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000064;transcript_name=HG00140_ch_T0000064;gene_name=CRLF2;ID=exon:HG00140_ch_T0000064:4;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1061064	1061197	.	-	2	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG00140_ch_T0000064;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000064;transcript_name=HG00140_ch_T0000064;gene_name=CRLF2;ID=CDS:HG00140_ch_T0000064:4;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1061198	1065121	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG00140_ch_T0000064;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000064;transcript_name=HG00140_ch_T0000064;gene_name=CRLF2;ID=intron:HG00140_ch_T0000064:4;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1065122	1065288	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG00140_ch_T0000064;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000064;transcript_name=HG00140_ch_T0000064;gene_name=CRLF2;ID=exon:HG00140_ch_T0000064:5;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1065122	1065134	.	-	0	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG00140_ch_T0000064;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000064;transcript_name=HG00140_ch_T0000064;gene_name=CRLF2;ID=CDS:HG00140_ch_T0000064:5;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	1065132	1065134	.	-	0	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG00140_ch_T0000064;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000064;transcript_name=HG00140_ch_T0000064;gene_name=CRLF2;ID=start_codon:HG00140_ch_T0000064;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1065289	1071244	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG00140_ch_T0000064;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000064;transcript_name=HG00140_ch_T0000064;gene_name=CRLF2;ID=intron:HG00140_ch_T0000064:5;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1071245	1071323	.	-	.	source_transcript=ENST00000711256.1;source_transcript_name=CRLF2-206;source_gene=ENSG00000292363.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292363.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711256.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=ENST00000711256.1,ENST00000711256.1;transcript_id=HG00140_ch_T0000064;gene_id=HG00140_ch_G0000019;Parent=HG00140_ch_T0000064;transcript_name=HG00140_ch_T0000064;gene_name=CRLF2;ID=exon:HG00140_ch_T0000064:6;Name=CRLF2;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	1107316	1108318	.	-	.	source_gene_common_name=ENSG00000310545;source_gene=ENSG00000310545.1;alternative_source_transcripts=ENST00000850707.1,ENST00000850707.1;gene_id=HG00140_ch_G0000020;gene_biotype=lncRNA;gene_name=ENSG00000310545;gene_sources=liftoff;ID=HG00140_ch_G0000020;Name=ENSG00000310545
HG00140_chrY	CAT	transcript	1107316	1108318	1000	-	.	source_transcript=ENST00000850707.1;source_transcript_name=ENST00000850707;source_gene=ENSG00000310545.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310545.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850707.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310545;alternative_source_transcripts=ENST00000850707.1,ENST00000850707.1;transcript_id=HG00140_ch_T0000065;gene_id=HG00140_ch_G0000020;Parent=HG00140_ch_G0000020;transcript_name=HG00140_ch_T0000065;gene_name=ENSG00000310545;ID=HG00140_ch_T0000065;Name=ENSG00000310545
HG00140_chrY	CAT	exon	1107316	1108318	.	-	.	source_transcript=ENST00000850707.1;source_transcript_name=ENST00000850707;source_gene=ENSG00000310545.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310545.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850707.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310545;alternative_source_transcripts=ENST00000850707.1,ENST00000850707.1;transcript_id=HG00140_ch_T0000065;gene_id=HG00140_ch_G0000020;Parent=HG00140_ch_T0000065;transcript_name=HG00140_ch_T0000065;gene_name=ENSG00000310545;ID=exon:HG00140_ch_T0000065:0;Name=ENSG00000310545;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	1107338	1122244	.	+	.	source_gene_common_name=ENSG00000310544;source_gene=ENSG00000310544.1;alternative_source_transcripts=ENST00000850705.1,ENST00000850705.1;gene_id=HG00140_ch_G0000021;gene_biotype=lncRNA;gene_name=ENSG00000310544;gene_sources=liftoff;ID=HG00140_ch_G0000021;Name=ENSG00000310544
HG00140_chrY	CAT	transcript	1107338	1122244	1000	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850705.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;alternative_source_transcripts=ENST00000850705.1,ENST00000850705.1;transcript_id=HG00140_ch_T0000066;gene_id=HG00140_ch_G0000021;Parent=HG00140_ch_G0000021;transcript_name=HG00140_ch_T0000066;gene_name=ENSG00000310544;ID=HG00140_ch_T0000066;Name=ENSG00000310544
HG00140_chrY	CAT	exon	1107338	1108272	.	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850705.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;alternative_source_transcripts=ENST00000850705.1,ENST00000850705.1;transcript_id=HG00140_ch_T0000066;gene_id=HG00140_ch_G0000021;Parent=HG00140_ch_T0000066;transcript_name=HG00140_ch_T0000066;gene_name=ENSG00000310544;ID=exon:HG00140_ch_T0000066:0;Name=ENSG00000310544;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1108273	1121332	.	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850705.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;alternative_source_transcripts=ENST00000850705.1,ENST00000850705.1;transcript_id=HG00140_ch_T0000066;gene_id=HG00140_ch_G0000021;Parent=HG00140_ch_T0000066;transcript_name=HG00140_ch_T0000066;gene_name=ENSG00000310544;ID=intron:HG00140_ch_T0000066:0;Name=ENSG00000310544;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1121333	1122244	.	+	.	source_transcript=ENST00000850705.1;source_transcript_name=ENST00000850705;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850705.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;alternative_source_transcripts=ENST00000850705.1,ENST00000850705.1;transcript_id=HG00140_ch_T0000066;gene_id=HG00140_ch_G0000021;Parent=HG00140_ch_T0000066;transcript_name=HG00140_ch_T0000066;gene_name=ENSG00000310544;ID=exon:HG00140_ch_T0000066:1;Name=ENSG00000310544;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1108144	1113900	1000	+	.	source_transcript=ENST00000850706.1;source_transcript_name=ENST00000850706;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850706.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;alternative_source_transcripts=ENST00000850706.1,ENST00000850706.1;transcript_id=HG00140_ch_T0000067;gene_id=HG00140_ch_G0000021;Parent=HG00140_ch_G0000021;transcript_name=HG00140_ch_T0000067;gene_name=ENSG00000310544;ID=HG00140_ch_T0000067;Name=ENSG00000310544
HG00140_chrY	CAT	exon	1108144	1108272	.	+	.	source_transcript=ENST00000850706.1;source_transcript_name=ENST00000850706;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850706.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;alternative_source_transcripts=ENST00000850706.1,ENST00000850706.1;transcript_id=HG00140_ch_T0000067;gene_id=HG00140_ch_G0000021;Parent=HG00140_ch_T0000067;transcript_name=HG00140_ch_T0000067;gene_name=ENSG00000310544;ID=exon:HG00140_ch_T0000067:0;Name=ENSG00000310544;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1108273	1113635	.	+	.	source_transcript=ENST00000850706.1;source_transcript_name=ENST00000850706;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850706.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;alternative_source_transcripts=ENST00000850706.1,ENST00000850706.1;transcript_id=HG00140_ch_T0000067;gene_id=HG00140_ch_G0000021;Parent=HG00140_ch_T0000067;transcript_name=HG00140_ch_T0000067;gene_name=ENSG00000310544;ID=intron:HG00140_ch_T0000067:0;Name=ENSG00000310544;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1113636	1113900	.	+	.	source_transcript=ENST00000850706.1;source_transcript_name=ENST00000850706;source_gene=ENSG00000310544.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310544.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850706.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310544;alternative_source_transcripts=ENST00000850706.1,ENST00000850706.1;transcript_id=HG00140_ch_T0000067;gene_id=HG00140_ch_G0000021;Parent=HG00140_ch_T0000067;transcript_name=HG00140_ch_T0000067;gene_name=ENSG00000310544;ID=exon:HG00140_ch_T0000067:1;Name=ENSG00000310544;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	1127443	1186466	.	+	.	source_gene_common_name=CSF2RA;source_gene=ENSG00000292357.2;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;gene_id=HG00140_ch_G0000022;gene_biotype=protein_coding;gene_name=CSF2RA;gene_sources=liftoff;ID=HG00140_ch_G0000022;Name=CSF2RA
HG00140_chrY	CAT	transcript	1127443	1186466	100	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00140_ch_T0000068;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_G0000022;transcript_name=HG00140_ch_T0000068;gene_name=CSF2RA;ID=HG00140_ch_T0000068;Name=CSF2RA
HG00140_chrY	CAT	exon	1127443	1127529	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00140_ch_T0000068;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000068;transcript_name=HG00140_ch_T0000068;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000068:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1127530	1133403	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00140_ch_T0000068;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000068;transcript_name=HG00140_ch_T0000068;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000068:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1133404	1133467	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00140_ch_T0000068;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000068;transcript_name=HG00140_ch_T0000068;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000068:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1133468	1141369	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00140_ch_T0000068;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000068;transcript_name=HG00140_ch_T0000068;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000068:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1141370	1141471	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00140_ch_T0000068;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000068;transcript_name=HG00140_ch_T0000068;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000068:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1141396	1141471	.	+	0	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00140_ch_T0000068;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000068;transcript_name=HG00140_ch_T0000068;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000068:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	1141396	1141398	.	+	0	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00140_ch_T0000068;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000068;transcript_name=HG00140_ch_T0000068;gene_name=CSF2RA;ID=start_codon:HG00140_ch_T0000068;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1141472	1144466	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00140_ch_T0000068;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000068;transcript_name=HG00140_ch_T0000068;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000068:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1144467	1144609	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00140_ch_T0000068;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000068;transcript_name=HG00140_ch_T0000068;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000068:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1144467	1144609	.	+	2	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00140_ch_T0000068;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000068;transcript_name=HG00140_ch_T0000068;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000068:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1144610	1147202	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00140_ch_T0000068;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000068;transcript_name=HG00140_ch_T0000068;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000068:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1147203	1147326	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00140_ch_T0000068;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000068;transcript_name=HG00140_ch_T0000068;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000068:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1147203	1147326	.	+	0	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00140_ch_T0000068;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000068;transcript_name=HG00140_ch_T0000068;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000068:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1147327	1147442	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00140_ch_T0000068;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000068;transcript_name=HG00140_ch_T0000068;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000068:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1147443	1147572	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00140_ch_T0000068;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000068;transcript_name=HG00140_ch_T0000068;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000068:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1147443	1147572	.	+	2	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00140_ch_T0000068;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000068;transcript_name=HG00140_ch_T0000068;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000068:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1147573	1149018	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00140_ch_T0000068;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000068;transcript_name=HG00140_ch_T0000068;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000068:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1149019	1149191	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00140_ch_T0000068;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000068;transcript_name=HG00140_ch_T0000068;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000068:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1149019	1149191	.	+	1	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00140_ch_T0000068;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000068;transcript_name=HG00140_ch_T0000068;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000068:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1149192	1153009	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00140_ch_T0000068;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000068;transcript_name=HG00140_ch_T0000068;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000068:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1153010	1153143	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00140_ch_T0000068;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000068;transcript_name=HG00140_ch_T0000068;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000068:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1153010	1153143	.	+	2	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00140_ch_T0000068;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000068;transcript_name=HG00140_ch_T0000068;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000068:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1153144	1154108	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00140_ch_T0000068;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000068;transcript_name=HG00140_ch_T0000068;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000068:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1154109	1154138	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00140_ch_T0000068;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000068;transcript_name=HG00140_ch_T0000068;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000068:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1154109	1154138	.	+	0	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00140_ch_T0000068;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000068;transcript_name=HG00140_ch_T0000068;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000068:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1154139	1161696	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00140_ch_T0000068;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000068;transcript_name=HG00140_ch_T0000068;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000068:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1161697	1161832	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00140_ch_T0000068;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000068;transcript_name=HG00140_ch_T0000068;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000068:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1161697	1161832	.	+	0	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00140_ch_T0000068;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000068;transcript_name=HG00140_ch_T0000068;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000068:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1161833	1165126	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00140_ch_T0000068;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000068;transcript_name=HG00140_ch_T0000068;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000068:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1165127	1165223	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00140_ch_T0000068;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000068;transcript_name=HG00140_ch_T0000068;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000068:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1165127	1165223	.	+	2	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00140_ch_T0000068;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000068;transcript_name=HG00140_ch_T0000068;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000068:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1165224	1166649	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00140_ch_T0000068;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000068;transcript_name=HG00140_ch_T0000068;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000068:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1166650	1166731	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00140_ch_T0000068;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000068;transcript_name=HG00140_ch_T0000068;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000068:11;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1166650	1166731	.	+	1	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00140_ch_T0000068;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000068;transcript_name=HG00140_ch_T0000068;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000068:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1166732	1186120	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00140_ch_T0000068;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000068;transcript_name=HG00140_ch_T0000068;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000068:11;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1186121	1186466	.	+	.	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00140_ch_T0000068;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000068;transcript_name=HG00140_ch_T0000068;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000068:12;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1186121	1186156	.	+	0	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00140_ch_T0000068;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000068;transcript_name=HG00140_ch_T0000068;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000068:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	1186154	1186156	.	+	0	source_transcript=ENST00000850688.1;source_transcript_name=CSF2RA-241;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850688.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850688.1,ENST00000850688.1;transcript_id=HG00140_ch_T0000068;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000068;transcript_name=HG00140_ch_T0000068;gene_name=CSF2RA;ID=stop_codon:HG00140_ch_T0000068;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1127450	1171493	100	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00140_ch_T0000069;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_G0000022;transcript_name=HG00140_ch_T0000069;gene_name=CSF2RA;ID=HG00140_ch_T0000069;Name=CSF2RA
HG00140_chrY	CAT	exon	1127450	1127529	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00140_ch_T0000069;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000069;transcript_name=HG00140_ch_T0000069;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000069:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1127530	1133403	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00140_ch_T0000069;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000069;transcript_name=HG00140_ch_T0000069;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000069:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1133404	1133491	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00140_ch_T0000069;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000069;transcript_name=HG00140_ch_T0000069;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000069:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1133492	1141369	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00140_ch_T0000069;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000069;transcript_name=HG00140_ch_T0000069;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000069:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1141370	1141471	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00140_ch_T0000069;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000069;transcript_name=HG00140_ch_T0000069;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000069:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1141396	1141471	.	+	0	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00140_ch_T0000069;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000069;transcript_name=HG00140_ch_T0000069;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000069:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	1141396	1141398	.	+	0	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00140_ch_T0000069;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000069;transcript_name=HG00140_ch_T0000069;gene_name=CSF2RA;ID=start_codon:HG00140_ch_T0000069;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1141472	1144466	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00140_ch_T0000069;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000069;transcript_name=HG00140_ch_T0000069;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000069:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1144467	1144609	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00140_ch_T0000069;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000069;transcript_name=HG00140_ch_T0000069;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000069:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1144467	1144609	.	+	2	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00140_ch_T0000069;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000069;transcript_name=HG00140_ch_T0000069;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000069:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1144610	1147202	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00140_ch_T0000069;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000069;transcript_name=HG00140_ch_T0000069;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000069:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1147203	1147326	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00140_ch_T0000069;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000069;transcript_name=HG00140_ch_T0000069;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000069:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1147203	1147326	.	+	0	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00140_ch_T0000069;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000069;transcript_name=HG00140_ch_T0000069;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000069:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1147327	1147442	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00140_ch_T0000069;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000069;transcript_name=HG00140_ch_T0000069;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000069:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1147443	1147572	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00140_ch_T0000069;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000069;transcript_name=HG00140_ch_T0000069;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000069:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1147443	1147572	.	+	2	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00140_ch_T0000069;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000069;transcript_name=HG00140_ch_T0000069;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000069:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1147573	1149018	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00140_ch_T0000069;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000069;transcript_name=HG00140_ch_T0000069;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000069:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1149019	1149191	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00140_ch_T0000069;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000069;transcript_name=HG00140_ch_T0000069;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000069:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1149019	1149191	.	+	1	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00140_ch_T0000069;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000069;transcript_name=HG00140_ch_T0000069;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000069:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1149192	1153009	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00140_ch_T0000069;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000069;transcript_name=HG00140_ch_T0000069;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000069:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1153010	1153143	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00140_ch_T0000069;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000069;transcript_name=HG00140_ch_T0000069;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000069:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1153010	1153143	.	+	2	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00140_ch_T0000069;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000069;transcript_name=HG00140_ch_T0000069;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000069:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1153144	1154108	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00140_ch_T0000069;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000069;transcript_name=HG00140_ch_T0000069;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000069:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1154109	1154138	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00140_ch_T0000069;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000069;transcript_name=HG00140_ch_T0000069;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000069:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1154109	1154138	.	+	0	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00140_ch_T0000069;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000069;transcript_name=HG00140_ch_T0000069;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000069:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1154139	1161696	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00140_ch_T0000069;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000069;transcript_name=HG00140_ch_T0000069;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000069:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1161697	1161832	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00140_ch_T0000069;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000069;transcript_name=HG00140_ch_T0000069;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000069:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1161697	1161832	.	+	0	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00140_ch_T0000069;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000069;transcript_name=HG00140_ch_T0000069;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000069:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1161833	1164464	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00140_ch_T0000069;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000069;transcript_name=HG00140_ch_T0000069;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000069:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1164465	1164566	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00140_ch_T0000069;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000069;transcript_name=HG00140_ch_T0000069;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000069:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1164465	1164566	.	+	2	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00140_ch_T0000069;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000069;transcript_name=HG00140_ch_T0000069;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000069:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1164567	1165126	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00140_ch_T0000069;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000069;transcript_name=HG00140_ch_T0000069;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000069:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1165127	1165223	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00140_ch_T0000069;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000069;transcript_name=HG00140_ch_T0000069;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000069:11;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1165127	1165223	.	+	2	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00140_ch_T0000069;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000069;transcript_name=HG00140_ch_T0000069;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000069:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1165224	1166649	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00140_ch_T0000069;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000069;transcript_name=HG00140_ch_T0000069;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000069:11;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1166650	1166731	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00140_ch_T0000069;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000069;transcript_name=HG00140_ch_T0000069;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000069:12;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1166650	1166731	.	+	1	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00140_ch_T0000069;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000069;transcript_name=HG00140_ch_T0000069;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000069:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1166732	1170960	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00140_ch_T0000069;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000069;transcript_name=HG00140_ch_T0000069;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000069:12;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1170961	1171493	.	+	.	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00140_ch_T0000069;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000069;transcript_name=HG00140_ch_T0000069;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000069:13;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1170961	1171038	.	+	0	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00140_ch_T0000069;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000069;transcript_name=HG00140_ch_T0000069;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000069:11;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	1171036	1171038	.	+	0	source_transcript=ENST00000711138.1;source_transcript_name=CSF2RA-229;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711138.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711138.1,ENST00000711138.1;transcript_id=HG00140_ch_T0000069;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000069;transcript_name=HG00140_ch_T0000069;gene_name=CSF2RA;ID=stop_codon:HG00140_ch_T0000069;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1127458	1171940	100	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00140_ch_T0000070;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_G0000022;transcript_name=HG00140_ch_T0000070;gene_name=CSF2RA;ID=HG00140_ch_T0000070;Name=CSF2RA
HG00140_chrY	CAT	exon	1127458	1127529	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00140_ch_T0000070;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000070;transcript_name=HG00140_ch_T0000070;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000070:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1127530	1133403	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00140_ch_T0000070;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000070;transcript_name=HG00140_ch_T0000070;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000070:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1133404	1133491	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00140_ch_T0000070;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000070;transcript_name=HG00140_ch_T0000070;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000070:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1133492	1141369	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00140_ch_T0000070;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000070;transcript_name=HG00140_ch_T0000070;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000070:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1141370	1141471	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00140_ch_T0000070;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000070;transcript_name=HG00140_ch_T0000070;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000070:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1141396	1141471	.	+	0	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00140_ch_T0000070;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000070;transcript_name=HG00140_ch_T0000070;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000070:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	1141396	1141398	.	+	0	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00140_ch_T0000070;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000070;transcript_name=HG00140_ch_T0000070;gene_name=CSF2RA;ID=start_codon:HG00140_ch_T0000070;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1141472	1144466	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00140_ch_T0000070;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000070;transcript_name=HG00140_ch_T0000070;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000070:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1144467	1144609	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00140_ch_T0000070;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000070;transcript_name=HG00140_ch_T0000070;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000070:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1144467	1144609	.	+	2	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00140_ch_T0000070;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000070;transcript_name=HG00140_ch_T0000070;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000070:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1144610	1147202	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00140_ch_T0000070;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000070;transcript_name=HG00140_ch_T0000070;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000070:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1147203	1147326	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00140_ch_T0000070;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000070;transcript_name=HG00140_ch_T0000070;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000070:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1147203	1147326	.	+	0	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00140_ch_T0000070;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000070;transcript_name=HG00140_ch_T0000070;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000070:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1147327	1147442	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00140_ch_T0000070;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000070;transcript_name=HG00140_ch_T0000070;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000070:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1147443	1147572	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00140_ch_T0000070;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000070;transcript_name=HG00140_ch_T0000070;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000070:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1147443	1147572	.	+	2	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00140_ch_T0000070;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000070;transcript_name=HG00140_ch_T0000070;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000070:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1147573	1149018	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00140_ch_T0000070;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000070;transcript_name=HG00140_ch_T0000070;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000070:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1149019	1149191	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00140_ch_T0000070;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000070;transcript_name=HG00140_ch_T0000070;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000070:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1149019	1149191	.	+	1	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00140_ch_T0000070;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000070;transcript_name=HG00140_ch_T0000070;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000070:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1149192	1153009	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00140_ch_T0000070;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000070;transcript_name=HG00140_ch_T0000070;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000070:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1153010	1153143	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00140_ch_T0000070;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000070;transcript_name=HG00140_ch_T0000070;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000070:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1153010	1153143	.	+	2	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00140_ch_T0000070;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000070;transcript_name=HG00140_ch_T0000070;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000070:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1153144	1154108	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00140_ch_T0000070;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000070;transcript_name=HG00140_ch_T0000070;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000070:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1154109	1154138	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00140_ch_T0000070;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000070;transcript_name=HG00140_ch_T0000070;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000070:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1154109	1154138	.	+	0	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00140_ch_T0000070;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000070;transcript_name=HG00140_ch_T0000070;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000070:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1154139	1161696	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00140_ch_T0000070;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000070;transcript_name=HG00140_ch_T0000070;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000070:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1161697	1161832	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00140_ch_T0000070;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000070;transcript_name=HG00140_ch_T0000070;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000070:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1161697	1161832	.	+	0	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00140_ch_T0000070;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000070;transcript_name=HG00140_ch_T0000070;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000070:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1161833	1165126	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00140_ch_T0000070;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000070;transcript_name=HG00140_ch_T0000070;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000070:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1165127	1165223	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00140_ch_T0000070;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000070;transcript_name=HG00140_ch_T0000070;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000070:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1165127	1165223	.	+	2	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00140_ch_T0000070;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000070;transcript_name=HG00140_ch_T0000070;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000070:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1165224	1166649	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00140_ch_T0000070;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000070;transcript_name=HG00140_ch_T0000070;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000070:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1166650	1166731	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00140_ch_T0000070;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000070;transcript_name=HG00140_ch_T0000070;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000070:11;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1166650	1166731	.	+	1	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00140_ch_T0000070;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000070;transcript_name=HG00140_ch_T0000070;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000070:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1166732	1170960	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00140_ch_T0000070;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000070;transcript_name=HG00140_ch_T0000070;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000070:11;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1170961	1171940	.	+	.	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00140_ch_T0000070;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000070;transcript_name=HG00140_ch_T0000070;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000070:12;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1170961	1171038	.	+	0	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00140_ch_T0000070;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000070;transcript_name=HG00140_ch_T0000070;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000070:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	1171036	1171038	.	+	0	source_transcript=ENST00000711137.1;source_transcript_name=CSF2RA-228;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711137.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711137.1,ENST00000711137.1;transcript_id=HG00140_ch_T0000070;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000070;transcript_name=HG00140_ch_T0000070;gene_name=CSF2RA;ID=stop_codon:HG00140_ch_T0000070;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1127464	1171494	100	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00140_ch_T0000071;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_G0000022;transcript_name=HG00140_ch_T0000071;gene_name=CSF2RA;ID=HG00140_ch_T0000071;Name=CSF2RA
HG00140_chrY	CAT	exon	1127464	1127529	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00140_ch_T0000071;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000071;transcript_name=HG00140_ch_T0000071;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000071:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1127530	1133403	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00140_ch_T0000071;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000071;transcript_name=HG00140_ch_T0000071;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000071:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1133404	1133467	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00140_ch_T0000071;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000071;transcript_name=HG00140_ch_T0000071;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000071:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1133468	1141369	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00140_ch_T0000071;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000071;transcript_name=HG00140_ch_T0000071;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000071:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1141370	1141471	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00140_ch_T0000071;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000071;transcript_name=HG00140_ch_T0000071;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000071:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1141396	1141471	.	+	0	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00140_ch_T0000071;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000071;transcript_name=HG00140_ch_T0000071;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000071:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	1141396	1141398	.	+	0	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00140_ch_T0000071;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000071;transcript_name=HG00140_ch_T0000071;gene_name=CSF2RA;ID=start_codon:HG00140_ch_T0000071;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1141472	1144466	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00140_ch_T0000071;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000071;transcript_name=HG00140_ch_T0000071;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000071:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1144467	1144609	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00140_ch_T0000071;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000071;transcript_name=HG00140_ch_T0000071;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000071:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1144467	1144609	.	+	2	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00140_ch_T0000071;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000071;transcript_name=HG00140_ch_T0000071;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000071:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1144610	1147202	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00140_ch_T0000071;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000071;transcript_name=HG00140_ch_T0000071;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000071:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1147203	1147326	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00140_ch_T0000071;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000071;transcript_name=HG00140_ch_T0000071;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000071:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1147203	1147326	.	+	0	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00140_ch_T0000071;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000071;transcript_name=HG00140_ch_T0000071;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000071:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1147327	1147442	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00140_ch_T0000071;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000071;transcript_name=HG00140_ch_T0000071;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000071:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1147443	1147572	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00140_ch_T0000071;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000071;transcript_name=HG00140_ch_T0000071;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000071:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1147443	1147572	.	+	2	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00140_ch_T0000071;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000071;transcript_name=HG00140_ch_T0000071;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000071:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1147573	1149018	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00140_ch_T0000071;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000071;transcript_name=HG00140_ch_T0000071;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000071:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1149019	1149191	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00140_ch_T0000071;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000071;transcript_name=HG00140_ch_T0000071;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000071:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1149019	1149191	.	+	1	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00140_ch_T0000071;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000071;transcript_name=HG00140_ch_T0000071;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000071:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1149192	1153009	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00140_ch_T0000071;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000071;transcript_name=HG00140_ch_T0000071;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000071:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1153010	1153143	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00140_ch_T0000071;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000071;transcript_name=HG00140_ch_T0000071;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000071:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1153010	1153143	.	+	2	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00140_ch_T0000071;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000071;transcript_name=HG00140_ch_T0000071;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000071:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1153144	1154108	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00140_ch_T0000071;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000071;transcript_name=HG00140_ch_T0000071;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000071:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1154109	1154138	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00140_ch_T0000071;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000071;transcript_name=HG00140_ch_T0000071;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000071:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1154109	1154138	.	+	0	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00140_ch_T0000071;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000071;transcript_name=HG00140_ch_T0000071;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000071:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1154139	1161696	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00140_ch_T0000071;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000071;transcript_name=HG00140_ch_T0000071;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000071:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1161697	1161832	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00140_ch_T0000071;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000071;transcript_name=HG00140_ch_T0000071;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000071:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1161697	1161832	.	+	0	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00140_ch_T0000071;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000071;transcript_name=HG00140_ch_T0000071;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000071:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1161833	1165126	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00140_ch_T0000071;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000071;transcript_name=HG00140_ch_T0000071;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000071:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1165127	1165223	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00140_ch_T0000071;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000071;transcript_name=HG00140_ch_T0000071;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000071:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1165127	1165223	.	+	2	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00140_ch_T0000071;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000071;transcript_name=HG00140_ch_T0000071;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000071:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1165224	1166649	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00140_ch_T0000071;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000071;transcript_name=HG00140_ch_T0000071;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000071:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1166650	1166731	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00140_ch_T0000071;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000071;transcript_name=HG00140_ch_T0000071;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000071:11;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1166650	1166731	.	+	1	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00140_ch_T0000071;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000071;transcript_name=HG00140_ch_T0000071;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000071:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1166732	1170960	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00140_ch_T0000071;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000071;transcript_name=HG00140_ch_T0000071;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000071:11;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1170961	1171494	.	+	.	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00140_ch_T0000071;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000071;transcript_name=HG00140_ch_T0000071;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000071:12;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1170961	1171038	.	+	0	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00140_ch_T0000071;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000071;transcript_name=HG00140_ch_T0000071;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000071:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	1171036	1171038	.	+	0	source_transcript=ENST00000711129.1;source_transcript_name=CSF2RA-223;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711129.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711129.1,ENST00000711129.1;transcript_id=HG00140_ch_T0000071;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000071;transcript_name=HG00140_ch_T0000071;gene_name=CSF2RA;ID=stop_codon:HG00140_ch_T0000071;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1127464	1171277	1000	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00140_ch_T0000072;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_G0000022;transcript_name=HG00140_ch_T0000072;gene_name=CSF2RA;ID=HG00140_ch_T0000072;Name=CSF2RA
HG00140_chrY	CAT	exon	1127464	1127529	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00140_ch_T0000072;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000072;transcript_name=HG00140_ch_T0000072;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000072:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1127530	1133403	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00140_ch_T0000072;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000072;transcript_name=HG00140_ch_T0000072;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000072:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1133404	1133491	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00140_ch_T0000072;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000072;transcript_name=HG00140_ch_T0000072;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000072:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1133492	1141369	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00140_ch_T0000072;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000072;transcript_name=HG00140_ch_T0000072;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000072:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1141370	1141734	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00140_ch_T0000072;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000072;transcript_name=HG00140_ch_T0000072;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000072:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1141396	1141575	.	+	0	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00140_ch_T0000072;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000072;transcript_name=HG00140_ch_T0000072;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000072:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	1141396	1141398	.	+	0	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00140_ch_T0000072;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000072;transcript_name=HG00140_ch_T0000072;gene_name=CSF2RA;ID=start_codon:HG00140_ch_T0000072;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	1141573	1141575	.	+	0	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00140_ch_T0000072;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000072;transcript_name=HG00140_ch_T0000072;gene_name=CSF2RA;ID=stop_codon:HG00140_ch_T0000072;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1141735	1144466	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00140_ch_T0000072;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000072;transcript_name=HG00140_ch_T0000072;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000072:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1144467	1144609	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00140_ch_T0000072;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000072;transcript_name=HG00140_ch_T0000072;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000072:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1144610	1147202	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00140_ch_T0000072;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000072;transcript_name=HG00140_ch_T0000072;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000072:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1147203	1147326	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00140_ch_T0000072;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000072;transcript_name=HG00140_ch_T0000072;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000072:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1147327	1147442	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00140_ch_T0000072;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000072;transcript_name=HG00140_ch_T0000072;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000072:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1147443	1147572	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00140_ch_T0000072;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000072;transcript_name=HG00140_ch_T0000072;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000072:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1147573	1149018	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00140_ch_T0000072;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000072;transcript_name=HG00140_ch_T0000072;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000072:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1149019	1149191	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00140_ch_T0000072;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000072;transcript_name=HG00140_ch_T0000072;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000072:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1149192	1153009	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00140_ch_T0000072;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000072;transcript_name=HG00140_ch_T0000072;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000072:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1153010	1153143	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00140_ch_T0000072;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000072;transcript_name=HG00140_ch_T0000072;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000072:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1153144	1154108	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00140_ch_T0000072;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000072;transcript_name=HG00140_ch_T0000072;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000072:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1154109	1154138	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00140_ch_T0000072;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000072;transcript_name=HG00140_ch_T0000072;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000072:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1154139	1161696	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00140_ch_T0000072;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000072;transcript_name=HG00140_ch_T0000072;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000072:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1161697	1161832	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00140_ch_T0000072;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000072;transcript_name=HG00140_ch_T0000072;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000072:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1161833	1164464	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00140_ch_T0000072;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000072;transcript_name=HG00140_ch_T0000072;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000072:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1164465	1164566	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00140_ch_T0000072;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000072;transcript_name=HG00140_ch_T0000072;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000072:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1164567	1165126	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00140_ch_T0000072;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000072;transcript_name=HG00140_ch_T0000072;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000072:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1165127	1165223	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00140_ch_T0000072;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000072;transcript_name=HG00140_ch_T0000072;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000072:11;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1165224	1166649	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00140_ch_T0000072;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000072;transcript_name=HG00140_ch_T0000072;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000072:11;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1166650	1166731	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00140_ch_T0000072;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000072;transcript_name=HG00140_ch_T0000072;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000072:12;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1166732	1170960	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00140_ch_T0000072;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000072;transcript_name=HG00140_ch_T0000072;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000072:12;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1170961	1171277	.	+	.	source_transcript=ENST00000711135.1;source_transcript_name=CSF2RA-226;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711135.1,ENST00000711135.1;transcript_id=HG00140_ch_T0000072;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000072;transcript_name=HG00140_ch_T0000072;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000072:13;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1127464	1161749	1000	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG00140_ch_T0000073;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_G0000022;transcript_name=HG00140_ch_T0000073;gene_name=CSF2RA;ID=HG00140_ch_T0000073;Name=CSF2RA
HG00140_chrY	CAT	exon	1127464	1127529	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG00140_ch_T0000073;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000073;transcript_name=HG00140_ch_T0000073;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000073:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1127530	1133403	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG00140_ch_T0000073;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000073;transcript_name=HG00140_ch_T0000073;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000073:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1133404	1133491	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG00140_ch_T0000073;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000073;transcript_name=HG00140_ch_T0000073;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000073:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1133492	1141369	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG00140_ch_T0000073;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000073;transcript_name=HG00140_ch_T0000073;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000073:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1141370	1141471	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG00140_ch_T0000073;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000073;transcript_name=HG00140_ch_T0000073;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000073:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1141472	1147202	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG00140_ch_T0000073;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000073;transcript_name=HG00140_ch_T0000073;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000073:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1147203	1147326	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG00140_ch_T0000073;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000073;transcript_name=HG00140_ch_T0000073;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000073:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1147327	1147442	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG00140_ch_T0000073;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000073;transcript_name=HG00140_ch_T0000073;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000073:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1147443	1147572	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG00140_ch_T0000073;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000073;transcript_name=HG00140_ch_T0000073;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000073:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1147573	1149018	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG00140_ch_T0000073;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000073;transcript_name=HG00140_ch_T0000073;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000073:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1149019	1149191	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG00140_ch_T0000073;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000073;transcript_name=HG00140_ch_T0000073;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000073:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1149192	1153009	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG00140_ch_T0000073;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000073;transcript_name=HG00140_ch_T0000073;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000073:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1153010	1153143	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG00140_ch_T0000073;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000073;transcript_name=HG00140_ch_T0000073;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000073:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1153144	1154108	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG00140_ch_T0000073;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000073;transcript_name=HG00140_ch_T0000073;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000073:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1154109	1154138	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG00140_ch_T0000073;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000073;transcript_name=HG00140_ch_T0000073;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000073:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1154139	1161696	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG00140_ch_T0000073;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000073;transcript_name=HG00140_ch_T0000073;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000073:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1161697	1161749	.	+	.	source_transcript=ENST00000711136.1;source_transcript_name=CSF2RA-227;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711136.1,ENST00000711136.1;transcript_id=HG00140_ch_T0000073;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000073;transcript_name=HG00140_ch_T0000073;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000073:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1127468	1153077	100	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG00140_ch_T0000074;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_G0000022;transcript_name=HG00140_ch_T0000074;gene_name=CSF2RA;ID=HG00140_ch_T0000074;Name=CSF2RA
HG00140_chrY	CAT	exon	1127468	1127529	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG00140_ch_T0000074;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000074;transcript_name=HG00140_ch_T0000074;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000074:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1127530	1141369	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG00140_ch_T0000074;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000074;transcript_name=HG00140_ch_T0000074;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000074:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1141370	1141471	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG00140_ch_T0000074;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000074;transcript_name=HG00140_ch_T0000074;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000074:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1141396	1141471	.	+	0	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG00140_ch_T0000074;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000074;transcript_name=HG00140_ch_T0000074;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000074:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	1141396	1141398	.	+	0	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG00140_ch_T0000074;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000074;transcript_name=HG00140_ch_T0000074;gene_name=CSF2RA;ID=start_codon:HG00140_ch_T0000074;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1141472	1144466	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG00140_ch_T0000074;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000074;transcript_name=HG00140_ch_T0000074;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000074:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1144467	1144609	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG00140_ch_T0000074;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000074;transcript_name=HG00140_ch_T0000074;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000074:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1144467	1144609	.	+	2	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG00140_ch_T0000074;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000074;transcript_name=HG00140_ch_T0000074;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000074:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1144610	1147202	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG00140_ch_T0000074;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000074;transcript_name=HG00140_ch_T0000074;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000074:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1147203	1147326	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG00140_ch_T0000074;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000074;transcript_name=HG00140_ch_T0000074;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000074:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1147203	1147326	.	+	0	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG00140_ch_T0000074;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000074;transcript_name=HG00140_ch_T0000074;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000074:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1147327	1147442	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG00140_ch_T0000074;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000074;transcript_name=HG00140_ch_T0000074;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000074:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1147443	1147572	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG00140_ch_T0000074;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000074;transcript_name=HG00140_ch_T0000074;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000074:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1147443	1147572	.	+	2	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG00140_ch_T0000074;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000074;transcript_name=HG00140_ch_T0000074;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000074:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1147573	1149018	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG00140_ch_T0000074;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000074;transcript_name=HG00140_ch_T0000074;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000074:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1149019	1149191	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG00140_ch_T0000074;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000074;transcript_name=HG00140_ch_T0000074;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000074:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1149019	1149191	.	+	1	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG00140_ch_T0000074;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000074;transcript_name=HG00140_ch_T0000074;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000074:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1149192	1153009	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG00140_ch_T0000074;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000074;transcript_name=HG00140_ch_T0000074;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000074:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1153010	1153077	.	+	.	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG00140_ch_T0000074;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000074;transcript_name=HG00140_ch_T0000074;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000074:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1153010	1153077	.	+	2	source_transcript=ENST00000711130.1;source_transcript_name=CSF2RA-224;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711130.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711130.1,ENST00000711130.1;transcript_id=HG00140_ch_T0000074;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000074;transcript_name=HG00140_ch_T0000074;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000074:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1127468	1184268	100	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00140_ch_T0000075;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_G0000022;transcript_name=HG00140_ch_T0000075;gene_name=CSF2RA;ID=HG00140_ch_T0000075;Name=CSF2RA
HG00140_chrY	CAT	exon	1127468	1127529	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00140_ch_T0000075;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000075;transcript_name=HG00140_ch_T0000075;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000075:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1127530	1133403	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00140_ch_T0000075;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000075;transcript_name=HG00140_ch_T0000075;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000075:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1133404	1133491	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00140_ch_T0000075;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000075;transcript_name=HG00140_ch_T0000075;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000075:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1133492	1141369	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00140_ch_T0000075;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000075;transcript_name=HG00140_ch_T0000075;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000075:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1141370	1141471	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00140_ch_T0000075;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000075;transcript_name=HG00140_ch_T0000075;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000075:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1141396	1141471	.	+	0	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00140_ch_T0000075;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000075;transcript_name=HG00140_ch_T0000075;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000075:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	1141396	1141398	.	+	0	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00140_ch_T0000075;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000075;transcript_name=HG00140_ch_T0000075;gene_name=CSF2RA;ID=start_codon:HG00140_ch_T0000075;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1141472	1144466	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00140_ch_T0000075;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000075;transcript_name=HG00140_ch_T0000075;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000075:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1144467	1144609	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00140_ch_T0000075;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000075;transcript_name=HG00140_ch_T0000075;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000075:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1144467	1144609	.	+	2	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00140_ch_T0000075;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000075;transcript_name=HG00140_ch_T0000075;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000075:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1144610	1147202	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00140_ch_T0000075;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000075;transcript_name=HG00140_ch_T0000075;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000075:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1147203	1147326	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00140_ch_T0000075;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000075;transcript_name=HG00140_ch_T0000075;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000075:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1147203	1147326	.	+	0	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00140_ch_T0000075;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000075;transcript_name=HG00140_ch_T0000075;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000075:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1147327	1147442	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00140_ch_T0000075;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000075;transcript_name=HG00140_ch_T0000075;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000075:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1147443	1147572	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00140_ch_T0000075;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000075;transcript_name=HG00140_ch_T0000075;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000075:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1147443	1147572	.	+	2	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00140_ch_T0000075;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000075;transcript_name=HG00140_ch_T0000075;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000075:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1147573	1149018	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00140_ch_T0000075;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000075;transcript_name=HG00140_ch_T0000075;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000075:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1149019	1149191	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00140_ch_T0000075;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000075;transcript_name=HG00140_ch_T0000075;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000075:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1149019	1149191	.	+	1	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00140_ch_T0000075;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000075;transcript_name=HG00140_ch_T0000075;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000075:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1149192	1153009	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00140_ch_T0000075;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000075;transcript_name=HG00140_ch_T0000075;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000075:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1153010	1153143	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00140_ch_T0000075;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000075;transcript_name=HG00140_ch_T0000075;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000075:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1153010	1153143	.	+	2	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00140_ch_T0000075;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000075;transcript_name=HG00140_ch_T0000075;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000075:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1153144	1154108	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00140_ch_T0000075;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000075;transcript_name=HG00140_ch_T0000075;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000075:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1154109	1154138	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00140_ch_T0000075;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000075;transcript_name=HG00140_ch_T0000075;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000075:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1154109	1154138	.	+	0	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00140_ch_T0000075;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000075;transcript_name=HG00140_ch_T0000075;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000075:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1154139	1161696	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00140_ch_T0000075;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000075;transcript_name=HG00140_ch_T0000075;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000075:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1161697	1161832	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00140_ch_T0000075;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000075;transcript_name=HG00140_ch_T0000075;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000075:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1161697	1161832	.	+	0	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00140_ch_T0000075;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000075;transcript_name=HG00140_ch_T0000075;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000075:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1161833	1165126	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00140_ch_T0000075;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000075;transcript_name=HG00140_ch_T0000075;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000075:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1165127	1165223	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00140_ch_T0000075;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000075;transcript_name=HG00140_ch_T0000075;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000075:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1165127	1165223	.	+	2	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00140_ch_T0000075;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000075;transcript_name=HG00140_ch_T0000075;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000075:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1165224	1166649	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00140_ch_T0000075;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000075;transcript_name=HG00140_ch_T0000075;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000075:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1166650	1166731	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00140_ch_T0000075;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000075;transcript_name=HG00140_ch_T0000075;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000075:11;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1166650	1166731	.	+	1	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00140_ch_T0000075;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000075;transcript_name=HG00140_ch_T0000075;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000075:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1166732	1183558	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00140_ch_T0000075;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000075;transcript_name=HG00140_ch_T0000075;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000075:11;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1183559	1183581	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00140_ch_T0000075;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000075;transcript_name=HG00140_ch_T0000075;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000075:12;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1183559	1183581	.	+	0	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00140_ch_T0000075;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000075;transcript_name=HG00140_ch_T0000075;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000075:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1183582	1183913	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00140_ch_T0000075;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000075;transcript_name=HG00140_ch_T0000075;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000075:12;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1183914	1184268	.	+	.	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00140_ch_T0000075;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000075;transcript_name=HG00140_ch_T0000075;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000075:13;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1183914	1184061	.	+	1	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00140_ch_T0000075;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000075;transcript_name=HG00140_ch_T0000075;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000075:11;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	1184059	1184061	.	+	0	source_transcript=ENST00000850689.1;source_transcript_name=CSF2RA-242;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850689.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850689.1,ENST00000850689.1;transcript_id=HG00140_ch_T0000075;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000075;transcript_name=HG00140_ch_T0000075;gene_name=CSF2RA;ID=stop_codon:HG00140_ch_T0000075;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1127480	1171483	100	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00140_ch_T0000076;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_G0000022;transcript_name=HG00140_ch_T0000076;gene_name=CSF2RA;ID=HG00140_ch_T0000076;Name=CSF2RA
HG00140_chrY	CAT	exon	1127480	1127529	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00140_ch_T0000076;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000076;transcript_name=HG00140_ch_T0000076;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000076:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1127530	1133403	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00140_ch_T0000076;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000076;transcript_name=HG00140_ch_T0000076;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000076:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1133404	1133467	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00140_ch_T0000076;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000076;transcript_name=HG00140_ch_T0000076;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000076:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1133468	1141100	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00140_ch_T0000076;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000076;transcript_name=HG00140_ch_T0000076;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000076:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1141101	1141252	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00140_ch_T0000076;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000076;transcript_name=HG00140_ch_T0000076;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000076:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1141253	1141369	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00140_ch_T0000076;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000076;transcript_name=HG00140_ch_T0000076;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000076:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1141370	1141471	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00140_ch_T0000076;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000076;transcript_name=HG00140_ch_T0000076;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000076:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1141396	1141471	.	+	0	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00140_ch_T0000076;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000076;transcript_name=HG00140_ch_T0000076;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000076:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	1141396	1141398	.	+	0	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00140_ch_T0000076;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000076;transcript_name=HG00140_ch_T0000076;gene_name=CSF2RA;ID=start_codon:HG00140_ch_T0000076;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1141472	1144466	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00140_ch_T0000076;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000076;transcript_name=HG00140_ch_T0000076;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000076:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1144467	1144609	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00140_ch_T0000076;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000076;transcript_name=HG00140_ch_T0000076;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000076:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1144467	1144609	.	+	2	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00140_ch_T0000076;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000076;transcript_name=HG00140_ch_T0000076;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000076:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1144610	1147202	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00140_ch_T0000076;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000076;transcript_name=HG00140_ch_T0000076;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000076:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1147203	1147326	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00140_ch_T0000076;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000076;transcript_name=HG00140_ch_T0000076;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000076:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1147203	1147326	.	+	0	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00140_ch_T0000076;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000076;transcript_name=HG00140_ch_T0000076;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000076:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1147327	1147442	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00140_ch_T0000076;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000076;transcript_name=HG00140_ch_T0000076;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000076:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1147443	1147572	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00140_ch_T0000076;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000076;transcript_name=HG00140_ch_T0000076;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000076:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1147443	1147572	.	+	2	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00140_ch_T0000076;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000076;transcript_name=HG00140_ch_T0000076;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000076:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1147573	1149018	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00140_ch_T0000076;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000076;transcript_name=HG00140_ch_T0000076;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000076:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1149019	1149191	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00140_ch_T0000076;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000076;transcript_name=HG00140_ch_T0000076;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000076:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1149019	1149191	.	+	1	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00140_ch_T0000076;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000076;transcript_name=HG00140_ch_T0000076;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000076:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1149192	1153009	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00140_ch_T0000076;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000076;transcript_name=HG00140_ch_T0000076;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000076:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1153010	1153143	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00140_ch_T0000076;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000076;transcript_name=HG00140_ch_T0000076;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000076:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1153010	1153143	.	+	2	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00140_ch_T0000076;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000076;transcript_name=HG00140_ch_T0000076;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000076:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1153144	1154108	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00140_ch_T0000076;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000076;transcript_name=HG00140_ch_T0000076;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000076:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1154109	1154138	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00140_ch_T0000076;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000076;transcript_name=HG00140_ch_T0000076;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000076:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1154109	1154138	.	+	0	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00140_ch_T0000076;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000076;transcript_name=HG00140_ch_T0000076;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000076:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1154139	1161696	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00140_ch_T0000076;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000076;transcript_name=HG00140_ch_T0000076;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000076:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1161697	1161832	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00140_ch_T0000076;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000076;transcript_name=HG00140_ch_T0000076;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000076:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1161697	1161832	.	+	0	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00140_ch_T0000076;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000076;transcript_name=HG00140_ch_T0000076;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000076:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1161833	1165126	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00140_ch_T0000076;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000076;transcript_name=HG00140_ch_T0000076;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000076:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1165127	1165223	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00140_ch_T0000076;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000076;transcript_name=HG00140_ch_T0000076;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000076:11;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1165127	1165223	.	+	2	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00140_ch_T0000076;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000076;transcript_name=HG00140_ch_T0000076;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000076:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1165224	1166649	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00140_ch_T0000076;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000076;transcript_name=HG00140_ch_T0000076;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000076:11;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1166650	1166731	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00140_ch_T0000076;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000076;transcript_name=HG00140_ch_T0000076;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000076:12;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1166650	1166731	.	+	1	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00140_ch_T0000076;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000076;transcript_name=HG00140_ch_T0000076;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000076:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1166732	1170960	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00140_ch_T0000076;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000076;transcript_name=HG00140_ch_T0000076;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000076:12;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1170961	1171483	.	+	.	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00140_ch_T0000076;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000076;transcript_name=HG00140_ch_T0000076;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000076:13;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1170961	1171038	.	+	0	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00140_ch_T0000076;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000076;transcript_name=HG00140_ch_T0000076;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000076:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	1171036	1171038	.	+	0	source_transcript=ENST00000711131.1;source_transcript_name=CSF2RA-225;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711131.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711131.1,ENST00000711131.1;transcript_id=HG00140_ch_T0000076;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000076;transcript_name=HG00140_ch_T0000076;gene_name=CSF2RA;ID=stop_codon:HG00140_ch_T0000076;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1127482	1167145	100	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00140_ch_T0000077;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_G0000022;transcript_name=HG00140_ch_T0000077;gene_name=CSF2RA;ID=HG00140_ch_T0000077;Name=CSF2RA
HG00140_chrY	CAT	exon	1127482	1127529	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00140_ch_T0000077;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000077;transcript_name=HG00140_ch_T0000077;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000077:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1127530	1133403	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00140_ch_T0000077;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000077;transcript_name=HG00140_ch_T0000077;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000077:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1133404	1133491	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00140_ch_T0000077;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000077;transcript_name=HG00140_ch_T0000077;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000077:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1133492	1141369	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00140_ch_T0000077;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000077;transcript_name=HG00140_ch_T0000077;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000077:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1141370	1141471	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00140_ch_T0000077;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000077;transcript_name=HG00140_ch_T0000077;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000077:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1141396	1141471	.	+	0	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00140_ch_T0000077;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000077;transcript_name=HG00140_ch_T0000077;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000077:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	1141396	1141398	.	+	0	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00140_ch_T0000077;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000077;transcript_name=HG00140_ch_T0000077;gene_name=CSF2RA;ID=start_codon:HG00140_ch_T0000077;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1141472	1144466	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00140_ch_T0000077;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000077;transcript_name=HG00140_ch_T0000077;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000077:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1144467	1144609	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00140_ch_T0000077;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000077;transcript_name=HG00140_ch_T0000077;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000077:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1144467	1144609	.	+	2	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00140_ch_T0000077;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000077;transcript_name=HG00140_ch_T0000077;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000077:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1144610	1147202	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00140_ch_T0000077;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000077;transcript_name=HG00140_ch_T0000077;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000077:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1147203	1147326	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00140_ch_T0000077;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000077;transcript_name=HG00140_ch_T0000077;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000077:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1147203	1147326	.	+	0	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00140_ch_T0000077;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000077;transcript_name=HG00140_ch_T0000077;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000077:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1147327	1147442	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00140_ch_T0000077;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000077;transcript_name=HG00140_ch_T0000077;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000077:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1147443	1147572	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00140_ch_T0000077;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000077;transcript_name=HG00140_ch_T0000077;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000077:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1147443	1147572	.	+	2	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00140_ch_T0000077;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000077;transcript_name=HG00140_ch_T0000077;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000077:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1147573	1149018	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00140_ch_T0000077;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000077;transcript_name=HG00140_ch_T0000077;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000077:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1149019	1149191	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00140_ch_T0000077;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000077;transcript_name=HG00140_ch_T0000077;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000077:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1149019	1149191	.	+	1	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00140_ch_T0000077;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000077;transcript_name=HG00140_ch_T0000077;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000077:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1149192	1153009	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00140_ch_T0000077;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000077;transcript_name=HG00140_ch_T0000077;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000077:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1153010	1153143	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00140_ch_T0000077;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000077;transcript_name=HG00140_ch_T0000077;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000077:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1153010	1153143	.	+	2	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00140_ch_T0000077;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000077;transcript_name=HG00140_ch_T0000077;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000077:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1153144	1154108	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00140_ch_T0000077;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000077;transcript_name=HG00140_ch_T0000077;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000077:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1154109	1154138	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00140_ch_T0000077;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000077;transcript_name=HG00140_ch_T0000077;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000077:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1154109	1154138	.	+	0	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00140_ch_T0000077;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000077;transcript_name=HG00140_ch_T0000077;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000077:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1154139	1161696	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00140_ch_T0000077;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000077;transcript_name=HG00140_ch_T0000077;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000077:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1161697	1161832	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00140_ch_T0000077;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000077;transcript_name=HG00140_ch_T0000077;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000077:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1161697	1161832	.	+	0	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00140_ch_T0000077;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000077;transcript_name=HG00140_ch_T0000077;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000077:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1161833	1165126	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00140_ch_T0000077;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000077;transcript_name=HG00140_ch_T0000077;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000077:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1165127	1165223	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00140_ch_T0000077;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000077;transcript_name=HG00140_ch_T0000077;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000077:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1165127	1165223	.	+	2	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00140_ch_T0000077;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000077;transcript_name=HG00140_ch_T0000077;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000077:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1165224	1166649	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00140_ch_T0000077;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000077;transcript_name=HG00140_ch_T0000077;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000077:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1166650	1166731	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00140_ch_T0000077;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000077;transcript_name=HG00140_ch_T0000077;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000077:11;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1166650	1166731	.	+	1	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00140_ch_T0000077;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000077;transcript_name=HG00140_ch_T0000077;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000077:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1166732	1166831	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00140_ch_T0000077;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000077;transcript_name=HG00140_ch_T0000077;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000077:11;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1166832	1167145	.	+	.	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00140_ch_T0000077;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000077;transcript_name=HG00140_ch_T0000077;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000077:12;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1166832	1166939	.	+	0	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00140_ch_T0000077;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000077;transcript_name=HG00140_ch_T0000077;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000077:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	1166937	1166939	.	+	0	source_transcript=ENST00000711220.1;source_transcript_name=CSF2RA-230;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711220.1,ENST00000711220.1;transcript_id=HG00140_ch_T0000077;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000077;transcript_name=HG00140_ch_T0000077;gene_name=CSF2RA;ID=stop_codon:HG00140_ch_T0000077;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1127482	1171481	100	+	.	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG00140_ch_T0000078;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_G0000022;transcript_name=HG00140_ch_T0000078;gene_name=CSF2RA;ID=HG00140_ch_T0000078;Name=CSF2RA
HG00140_chrY	CAT	exon	1127482	1127529	.	+	.	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG00140_ch_T0000078;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000078;transcript_name=HG00140_ch_T0000078;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000078:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1127530	1133403	.	+	.	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG00140_ch_T0000078;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000078;transcript_name=HG00140_ch_T0000078;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000078:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1133404	1133491	.	+	.	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG00140_ch_T0000078;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000078;transcript_name=HG00140_ch_T0000078;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000078:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1133492	1141369	.	+	.	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG00140_ch_T0000078;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000078;transcript_name=HG00140_ch_T0000078;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000078:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1141370	1141471	.	+	.	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG00140_ch_T0000078;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000078;transcript_name=HG00140_ch_T0000078;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000078:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1141396	1141471	.	+	0	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG00140_ch_T0000078;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000078;transcript_name=HG00140_ch_T0000078;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000078:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	1141396	1141398	.	+	0	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG00140_ch_T0000078;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000078;transcript_name=HG00140_ch_T0000078;gene_name=CSF2RA;ID=start_codon:HG00140_ch_T0000078;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1141472	1144466	.	+	.	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG00140_ch_T0000078;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000078;transcript_name=HG00140_ch_T0000078;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000078:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1144467	1144609	.	+	.	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG00140_ch_T0000078;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000078;transcript_name=HG00140_ch_T0000078;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000078:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1144467	1144609	.	+	2	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG00140_ch_T0000078;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000078;transcript_name=HG00140_ch_T0000078;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000078:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1144610	1145855	.	+	.	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG00140_ch_T0000078;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000078;transcript_name=HG00140_ch_T0000078;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000078:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1145856	1145880	.	+	.	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG00140_ch_T0000078;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000078;transcript_name=HG00140_ch_T0000078;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000078:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1145856	1145880	.	+	0	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG00140_ch_T0000078;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000078;transcript_name=HG00140_ch_T0000078;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000078:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1145881	1171398	.	+	.	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG00140_ch_T0000078;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000078;transcript_name=HG00140_ch_T0000078;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000078:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1171399	1171481	.	+	.	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG00140_ch_T0000078;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000078;transcript_name=HG00140_ch_T0000078;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000078:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1171399	1171427	.	+	2	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG00140_ch_T0000078;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000078;transcript_name=HG00140_ch_T0000078;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000078:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	1171425	1171427	.	+	0	source_transcript=ENST00000711221.1;source_transcript_name=CSF2RA-231;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711221.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711221.1,ENST00000711221.1;transcript_id=HG00140_ch_T0000078;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000078;transcript_name=HG00140_ch_T0000078;gene_name=CSF2RA;ID=stop_codon:HG00140_ch_T0000078;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1127484	1184287	100	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00140_ch_T0000079;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_G0000022;transcript_name=HG00140_ch_T0000079;gene_name=CSF2RA;ID=HG00140_ch_T0000079;Name=CSF2RA
HG00140_chrY	CAT	exon	1127484	1127529	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00140_ch_T0000079;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000079;transcript_name=HG00140_ch_T0000079;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000079:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1127530	1133403	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00140_ch_T0000079;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000079;transcript_name=HG00140_ch_T0000079;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000079:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1133404	1133491	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00140_ch_T0000079;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000079;transcript_name=HG00140_ch_T0000079;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000079:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1133492	1141369	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00140_ch_T0000079;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000079;transcript_name=HG00140_ch_T0000079;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000079:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1141370	1141471	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00140_ch_T0000079;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000079;transcript_name=HG00140_ch_T0000079;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000079:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1141396	1141471	.	+	0	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00140_ch_T0000079;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000079;transcript_name=HG00140_ch_T0000079;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000079:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	1141396	1141398	.	+	0	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00140_ch_T0000079;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000079;transcript_name=HG00140_ch_T0000079;gene_name=CSF2RA;ID=start_codon:HG00140_ch_T0000079;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1141472	1144466	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00140_ch_T0000079;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000079;transcript_name=HG00140_ch_T0000079;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000079:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1144467	1144609	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00140_ch_T0000079;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000079;transcript_name=HG00140_ch_T0000079;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000079:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1144467	1144609	.	+	2	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00140_ch_T0000079;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000079;transcript_name=HG00140_ch_T0000079;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000079:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1144610	1147202	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00140_ch_T0000079;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000079;transcript_name=HG00140_ch_T0000079;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000079:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1147203	1147326	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00140_ch_T0000079;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000079;transcript_name=HG00140_ch_T0000079;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000079:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1147203	1147326	.	+	0	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00140_ch_T0000079;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000079;transcript_name=HG00140_ch_T0000079;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000079:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1147327	1147442	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00140_ch_T0000079;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000079;transcript_name=HG00140_ch_T0000079;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000079:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1147443	1147572	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00140_ch_T0000079;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000079;transcript_name=HG00140_ch_T0000079;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000079:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1147443	1147572	.	+	2	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00140_ch_T0000079;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000079;transcript_name=HG00140_ch_T0000079;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000079:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1147573	1149018	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00140_ch_T0000079;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000079;transcript_name=HG00140_ch_T0000079;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000079:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1149019	1149191	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00140_ch_T0000079;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000079;transcript_name=HG00140_ch_T0000079;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000079:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1149019	1149191	.	+	1	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00140_ch_T0000079;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000079;transcript_name=HG00140_ch_T0000079;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000079:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1149192	1153009	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00140_ch_T0000079;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000079;transcript_name=HG00140_ch_T0000079;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000079:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1153010	1153143	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00140_ch_T0000079;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000079;transcript_name=HG00140_ch_T0000079;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000079:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1153010	1153143	.	+	2	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00140_ch_T0000079;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000079;transcript_name=HG00140_ch_T0000079;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000079:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1153144	1154108	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00140_ch_T0000079;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000079;transcript_name=HG00140_ch_T0000079;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000079:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1154109	1154138	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00140_ch_T0000079;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000079;transcript_name=HG00140_ch_T0000079;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000079:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1154109	1154138	.	+	0	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00140_ch_T0000079;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000079;transcript_name=HG00140_ch_T0000079;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000079:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1154139	1161696	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00140_ch_T0000079;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000079;transcript_name=HG00140_ch_T0000079;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000079:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1161697	1161832	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00140_ch_T0000079;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000079;transcript_name=HG00140_ch_T0000079;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000079:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1161697	1161832	.	+	0	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00140_ch_T0000079;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000079;transcript_name=HG00140_ch_T0000079;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000079:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1161833	1165126	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00140_ch_T0000079;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000079;transcript_name=HG00140_ch_T0000079;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000079:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1165127	1165223	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00140_ch_T0000079;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000079;transcript_name=HG00140_ch_T0000079;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000079:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1165127	1165223	.	+	2	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00140_ch_T0000079;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000079;transcript_name=HG00140_ch_T0000079;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000079:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1165224	1166649	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00140_ch_T0000079;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000079;transcript_name=HG00140_ch_T0000079;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000079:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1166650	1166731	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00140_ch_T0000079;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000079;transcript_name=HG00140_ch_T0000079;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000079:11;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1166650	1166731	.	+	1	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00140_ch_T0000079;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000079;transcript_name=HG00140_ch_T0000079;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000079:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1166732	1183558	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00140_ch_T0000079;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000079;transcript_name=HG00140_ch_T0000079;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000079:11;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1183559	1184287	.	+	.	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00140_ch_T0000079;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000079;transcript_name=HG00140_ch_T0000079;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000079:12;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1183559	1183585	.	+	0	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00140_ch_T0000079;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000079;transcript_name=HG00140_ch_T0000079;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000079:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	1183583	1183585	.	+	0	source_transcript=ENST00000850690.1;source_transcript_name=CSF2RA-243;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850690.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850690.1,ENST00000850690.1;transcript_id=HG00140_ch_T0000079;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000079;transcript_name=HG00140_ch_T0000079;gene_name=CSF2RA;ID=stop_codon:HG00140_ch_T0000079;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1127484	1186309	100	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00140_ch_T0000080;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_G0000022;transcript_name=HG00140_ch_T0000080;gene_name=CSF2RA;ID=HG00140_ch_T0000080;Name=CSF2RA
HG00140_chrY	CAT	exon	1127484	1127529	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00140_ch_T0000080;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000080;transcript_name=HG00140_ch_T0000080;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000080:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1127530	1133403	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00140_ch_T0000080;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000080;transcript_name=HG00140_ch_T0000080;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000080:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1133404	1133491	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00140_ch_T0000080;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000080;transcript_name=HG00140_ch_T0000080;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000080:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1133492	1141369	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00140_ch_T0000080;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000080;transcript_name=HG00140_ch_T0000080;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000080:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1141370	1141471	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00140_ch_T0000080;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000080;transcript_name=HG00140_ch_T0000080;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000080:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1141396	1141471	.	+	0	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00140_ch_T0000080;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000080;transcript_name=HG00140_ch_T0000080;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000080:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	1141396	1141398	.	+	0	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00140_ch_T0000080;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000080;transcript_name=HG00140_ch_T0000080;gene_name=CSF2RA;ID=start_codon:HG00140_ch_T0000080;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1141472	1144466	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00140_ch_T0000080;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000080;transcript_name=HG00140_ch_T0000080;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000080:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1144467	1144609	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00140_ch_T0000080;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000080;transcript_name=HG00140_ch_T0000080;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000080:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1144467	1144609	.	+	2	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00140_ch_T0000080;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000080;transcript_name=HG00140_ch_T0000080;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000080:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1144610	1147202	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00140_ch_T0000080;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000080;transcript_name=HG00140_ch_T0000080;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000080:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1147203	1147326	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00140_ch_T0000080;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000080;transcript_name=HG00140_ch_T0000080;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000080:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1147203	1147326	.	+	0	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00140_ch_T0000080;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000080;transcript_name=HG00140_ch_T0000080;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000080:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1147327	1147442	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00140_ch_T0000080;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000080;transcript_name=HG00140_ch_T0000080;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000080:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1147443	1147572	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00140_ch_T0000080;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000080;transcript_name=HG00140_ch_T0000080;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000080:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1147443	1147572	.	+	2	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00140_ch_T0000080;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000080;transcript_name=HG00140_ch_T0000080;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000080:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1147573	1149018	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00140_ch_T0000080;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000080;transcript_name=HG00140_ch_T0000080;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000080:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1149019	1149191	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00140_ch_T0000080;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000080;transcript_name=HG00140_ch_T0000080;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000080:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1149019	1149191	.	+	1	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00140_ch_T0000080;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000080;transcript_name=HG00140_ch_T0000080;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000080:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1149192	1153009	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00140_ch_T0000080;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000080;transcript_name=HG00140_ch_T0000080;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000080:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1153010	1153143	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00140_ch_T0000080;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000080;transcript_name=HG00140_ch_T0000080;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000080:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1153010	1153143	.	+	2	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00140_ch_T0000080;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000080;transcript_name=HG00140_ch_T0000080;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000080:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1153144	1154108	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00140_ch_T0000080;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000080;transcript_name=HG00140_ch_T0000080;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000080:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1154109	1154138	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00140_ch_T0000080;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000080;transcript_name=HG00140_ch_T0000080;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000080:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1154109	1154138	.	+	0	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00140_ch_T0000080;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000080;transcript_name=HG00140_ch_T0000080;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000080:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1154139	1161696	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00140_ch_T0000080;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000080;transcript_name=HG00140_ch_T0000080;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000080:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1161697	1161832	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00140_ch_T0000080;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000080;transcript_name=HG00140_ch_T0000080;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000080:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1161697	1161832	.	+	0	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00140_ch_T0000080;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000080;transcript_name=HG00140_ch_T0000080;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000080:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1161833	1165126	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00140_ch_T0000080;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000080;transcript_name=HG00140_ch_T0000080;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000080:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1165127	1165223	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00140_ch_T0000080;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000080;transcript_name=HG00140_ch_T0000080;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000080:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1165127	1165223	.	+	2	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00140_ch_T0000080;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000080;transcript_name=HG00140_ch_T0000080;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000080:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1165224	1166649	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00140_ch_T0000080;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000080;transcript_name=HG00140_ch_T0000080;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000080:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1166650	1166731	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00140_ch_T0000080;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000080;transcript_name=HG00140_ch_T0000080;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000080:11;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1166650	1166731	.	+	1	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00140_ch_T0000080;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000080;transcript_name=HG00140_ch_T0000080;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000080:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1166732	1186120	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00140_ch_T0000080;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000080;transcript_name=HG00140_ch_T0000080;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000080:11;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1186121	1186309	.	+	.	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00140_ch_T0000080;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000080;transcript_name=HG00140_ch_T0000080;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000080:12;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1186121	1186156	.	+	0	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00140_ch_T0000080;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000080;transcript_name=HG00140_ch_T0000080;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000080:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	1186154	1186156	.	+	0	source_transcript=ENST00000850691.1;source_transcript_name=CSF2RA-244;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850691.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000850691.1,ENST00000850691.1;transcript_id=HG00140_ch_T0000080;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000080;transcript_name=HG00140_ch_T0000080;gene_name=CSF2RA;ID=stop_codon:HG00140_ch_T0000080;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1127485	1140912	1000	+	.	source_transcript=ENST00000711222.1;source_transcript_name=CSF2RA-232;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711222.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711222.1,ENST00000711222.1;transcript_id=HG00140_ch_T0000081;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_G0000022;transcript_name=HG00140_ch_T0000081;gene_name=CSF2RA;ID=HG00140_ch_T0000081;Name=CSF2RA
HG00140_chrY	CAT	exon	1127485	1127529	.	+	.	source_transcript=ENST00000711222.1;source_transcript_name=CSF2RA-232;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711222.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711222.1,ENST00000711222.1;transcript_id=HG00140_ch_T0000081;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000081;transcript_name=HG00140_ch_T0000081;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000081:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1127530	1133403	.	+	.	source_transcript=ENST00000711222.1;source_transcript_name=CSF2RA-232;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711222.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711222.1,ENST00000711222.1;transcript_id=HG00140_ch_T0000081;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000081;transcript_name=HG00140_ch_T0000081;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000081:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1133404	1133467	.	+	.	source_transcript=ENST00000711222.1;source_transcript_name=CSF2RA-232;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711222.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711222.1,ENST00000711222.1;transcript_id=HG00140_ch_T0000081;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000081;transcript_name=HG00140_ch_T0000081;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000081:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1133468	1140561	.	+	.	source_transcript=ENST00000711222.1;source_transcript_name=CSF2RA-232;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711222.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711222.1,ENST00000711222.1;transcript_id=HG00140_ch_T0000081;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000081;transcript_name=HG00140_ch_T0000081;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000081:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1140562	1140912	.	+	.	source_transcript=ENST00000711222.1;source_transcript_name=CSF2RA-232;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711222.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711222.1,ENST00000711222.1;transcript_id=HG00140_ch_T0000081;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000081;transcript_name=HG00140_ch_T0000081;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000081:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1127495	1171493	100	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00140_ch_T0000082;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_G0000022;transcript_name=HG00140_ch_T0000082;gene_name=CSF2RA;ID=HG00140_ch_T0000082;Name=CSF2RA
HG00140_chrY	CAT	exon	1127495	1127529	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00140_ch_T0000082;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000082;transcript_name=HG00140_ch_T0000082;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000082:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1127530	1133403	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00140_ch_T0000082;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000082;transcript_name=HG00140_ch_T0000082;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000082:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1133404	1133491	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00140_ch_T0000082;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000082;transcript_name=HG00140_ch_T0000082;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000082:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1133492	1141369	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00140_ch_T0000082;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000082;transcript_name=HG00140_ch_T0000082;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000082:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1141370	1141471	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00140_ch_T0000082;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000082;transcript_name=HG00140_ch_T0000082;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000082:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1141396	1141471	.	+	0	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00140_ch_T0000082;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000082;transcript_name=HG00140_ch_T0000082;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000082:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	1141396	1141398	.	+	0	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00140_ch_T0000082;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000082;transcript_name=HG00140_ch_T0000082;gene_name=CSF2RA;ID=start_codon:HG00140_ch_T0000082;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1141472	1144466	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00140_ch_T0000082;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000082;transcript_name=HG00140_ch_T0000082;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000082:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1144467	1144609	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00140_ch_T0000082;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000082;transcript_name=HG00140_ch_T0000082;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000082:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1144467	1144609	.	+	2	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00140_ch_T0000082;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000082;transcript_name=HG00140_ch_T0000082;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000082:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1144610	1147202	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00140_ch_T0000082;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000082;transcript_name=HG00140_ch_T0000082;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000082:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1147203	1147326	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00140_ch_T0000082;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000082;transcript_name=HG00140_ch_T0000082;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000082:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1147203	1147326	.	+	0	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00140_ch_T0000082;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000082;transcript_name=HG00140_ch_T0000082;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000082:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1147327	1147442	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00140_ch_T0000082;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000082;transcript_name=HG00140_ch_T0000082;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000082:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1147443	1147572	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00140_ch_T0000082;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000082;transcript_name=HG00140_ch_T0000082;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000082:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1147443	1147572	.	+	2	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00140_ch_T0000082;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000082;transcript_name=HG00140_ch_T0000082;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000082:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1147573	1149018	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00140_ch_T0000082;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000082;transcript_name=HG00140_ch_T0000082;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000082:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1149019	1149191	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00140_ch_T0000082;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000082;transcript_name=HG00140_ch_T0000082;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000082:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1149019	1149191	.	+	1	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00140_ch_T0000082;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000082;transcript_name=HG00140_ch_T0000082;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000082:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1149192	1153009	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00140_ch_T0000082;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000082;transcript_name=HG00140_ch_T0000082;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000082:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1153010	1153143	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00140_ch_T0000082;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000082;transcript_name=HG00140_ch_T0000082;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000082:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1153010	1153143	.	+	2	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00140_ch_T0000082;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000082;transcript_name=HG00140_ch_T0000082;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000082:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1153144	1154108	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00140_ch_T0000082;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000082;transcript_name=HG00140_ch_T0000082;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000082:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1154109	1154138	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00140_ch_T0000082;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000082;transcript_name=HG00140_ch_T0000082;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000082:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1154109	1154138	.	+	0	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00140_ch_T0000082;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000082;transcript_name=HG00140_ch_T0000082;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000082:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1154139	1161696	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00140_ch_T0000082;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000082;transcript_name=HG00140_ch_T0000082;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000082:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1161697	1161832	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00140_ch_T0000082;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000082;transcript_name=HG00140_ch_T0000082;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000082:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1161697	1161832	.	+	0	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00140_ch_T0000082;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000082;transcript_name=HG00140_ch_T0000082;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000082:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1161833	1170960	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00140_ch_T0000082;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000082;transcript_name=HG00140_ch_T0000082;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000082:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1170961	1171493	.	+	.	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00140_ch_T0000082;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000082;transcript_name=HG00140_ch_T0000082;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000082:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1170961	1171148	.	+	2	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00140_ch_T0000082;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000082;transcript_name=HG00140_ch_T0000082;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000082:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	1171146	1171148	.	+	0	source_transcript=ENST00000711223.1;source_transcript_name=CSF2RA-233;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711223.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711223.1,ENST00000711223.1;transcript_id=HG00140_ch_T0000082;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000082;transcript_name=HG00140_ch_T0000082;gene_name=CSF2RA;ID=stop_codon:HG00140_ch_T0000082;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1127495	1171493	100	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00140_ch_T0000083;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_G0000022;transcript_name=HG00140_ch_T0000083;gene_name=CSF2RA;ID=HG00140_ch_T0000083;Name=CSF2RA
HG00140_chrY	CAT	exon	1127495	1127529	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00140_ch_T0000083;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000083;transcript_name=HG00140_ch_T0000083;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000083:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1127530	1133403	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00140_ch_T0000083;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000083;transcript_name=HG00140_ch_T0000083;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000083:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1133404	1133491	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00140_ch_T0000083;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000083;transcript_name=HG00140_ch_T0000083;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000083:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1133492	1141369	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00140_ch_T0000083;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000083;transcript_name=HG00140_ch_T0000083;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000083:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1141370	1141471	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00140_ch_T0000083;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000083;transcript_name=HG00140_ch_T0000083;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000083:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1141396	1141471	.	+	0	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00140_ch_T0000083;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000083;transcript_name=HG00140_ch_T0000083;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000083:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	1141396	1141398	.	+	0	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00140_ch_T0000083;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000083;transcript_name=HG00140_ch_T0000083;gene_name=CSF2RA;ID=start_codon:HG00140_ch_T0000083;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1141472	1144466	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00140_ch_T0000083;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000083;transcript_name=HG00140_ch_T0000083;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000083:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1144467	1144609	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00140_ch_T0000083;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000083;transcript_name=HG00140_ch_T0000083;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000083:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1144467	1144609	.	+	2	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00140_ch_T0000083;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000083;transcript_name=HG00140_ch_T0000083;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000083:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1144610	1147202	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00140_ch_T0000083;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000083;transcript_name=HG00140_ch_T0000083;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000083:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1147203	1147326	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00140_ch_T0000083;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000083;transcript_name=HG00140_ch_T0000083;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000083:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1147203	1147326	.	+	0	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00140_ch_T0000083;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000083;transcript_name=HG00140_ch_T0000083;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000083:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1147327	1147442	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00140_ch_T0000083;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000083;transcript_name=HG00140_ch_T0000083;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000083:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1147443	1147572	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00140_ch_T0000083;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000083;transcript_name=HG00140_ch_T0000083;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000083:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1147443	1147572	.	+	2	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00140_ch_T0000083;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000083;transcript_name=HG00140_ch_T0000083;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000083:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1147573	1149018	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00140_ch_T0000083;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000083;transcript_name=HG00140_ch_T0000083;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000083:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1149019	1149191	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00140_ch_T0000083;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000083;transcript_name=HG00140_ch_T0000083;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000083:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1149019	1149191	.	+	1	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00140_ch_T0000083;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000083;transcript_name=HG00140_ch_T0000083;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000083:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1149192	1166649	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00140_ch_T0000083;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000083;transcript_name=HG00140_ch_T0000083;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000083:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1166650	1166731	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00140_ch_T0000083;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000083;transcript_name=HG00140_ch_T0000083;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000083:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1166650	1166705	.	+	2	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00140_ch_T0000083;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000083;transcript_name=HG00140_ch_T0000083;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000083:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	1166703	1166705	.	+	0	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00140_ch_T0000083;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000083;transcript_name=HG00140_ch_T0000083;gene_name=CSF2RA;ID=stop_codon:HG00140_ch_T0000083;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1166732	1170960	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00140_ch_T0000083;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000083;transcript_name=HG00140_ch_T0000083;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000083:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1170961	1171493	.	+	.	source_transcript=ENST00000711224.1;source_transcript_name=CSF2RA-234;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711224.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711224.1,ENST00000711224.1;transcript_id=HG00140_ch_T0000083;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000083;transcript_name=HG00140_ch_T0000083;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000083:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1127495	1171493	1000	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00140_ch_T0000084;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_G0000022;transcript_name=HG00140_ch_T0000084;gene_name=CSF2RA;ID=HG00140_ch_T0000084;Name=CSF2RA
HG00140_chrY	CAT	exon	1127495	1127529	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00140_ch_T0000084;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000084;transcript_name=HG00140_ch_T0000084;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000084:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1127530	1133403	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00140_ch_T0000084;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000084;transcript_name=HG00140_ch_T0000084;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000084:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1133404	1133491	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00140_ch_T0000084;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000084;transcript_name=HG00140_ch_T0000084;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000084:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1133492	1141369	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00140_ch_T0000084;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000084;transcript_name=HG00140_ch_T0000084;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000084:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1141370	1141471	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00140_ch_T0000084;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000084;transcript_name=HG00140_ch_T0000084;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000084:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1141396	1141471	.	+	0	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00140_ch_T0000084;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000084;transcript_name=HG00140_ch_T0000084;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000084:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	1141396	1141398	.	+	0	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00140_ch_T0000084;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000084;transcript_name=HG00140_ch_T0000084;gene_name=CSF2RA;ID=start_codon:HG00140_ch_T0000084;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1141472	1144466	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00140_ch_T0000084;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000084;transcript_name=HG00140_ch_T0000084;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000084:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1144467	1144609	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00140_ch_T0000084;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000084;transcript_name=HG00140_ch_T0000084;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000084:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1144467	1144609	.	+	2	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00140_ch_T0000084;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000084;transcript_name=HG00140_ch_T0000084;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000084:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1144610	1147202	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00140_ch_T0000084;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000084;transcript_name=HG00140_ch_T0000084;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000084:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1147203	1147326	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00140_ch_T0000084;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000084;transcript_name=HG00140_ch_T0000084;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000084:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1147203	1147326	.	+	0	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00140_ch_T0000084;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000084;transcript_name=HG00140_ch_T0000084;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000084:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1147327	1147442	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00140_ch_T0000084;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000084;transcript_name=HG00140_ch_T0000084;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000084:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1147443	1147572	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00140_ch_T0000084;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000084;transcript_name=HG00140_ch_T0000084;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000084:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1147443	1147572	.	+	2	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00140_ch_T0000084;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000084;transcript_name=HG00140_ch_T0000084;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000084:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1147573	1149018	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00140_ch_T0000084;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000084;transcript_name=HG00140_ch_T0000084;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000084:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1149019	1149191	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00140_ch_T0000084;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000084;transcript_name=HG00140_ch_T0000084;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000084:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1149019	1149191	.	+	1	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00140_ch_T0000084;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000084;transcript_name=HG00140_ch_T0000084;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000084:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1149192	1153009	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00140_ch_T0000084;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000084;transcript_name=HG00140_ch_T0000084;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000084:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1153010	1153143	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00140_ch_T0000084;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000084;transcript_name=HG00140_ch_T0000084;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000084:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1153010	1153143	.	+	2	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00140_ch_T0000084;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000084;transcript_name=HG00140_ch_T0000084;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000084:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1153144	1154108	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00140_ch_T0000084;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000084;transcript_name=HG00140_ch_T0000084;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000084:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1154109	1154138	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00140_ch_T0000084;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000084;transcript_name=HG00140_ch_T0000084;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000084:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1154109	1154138	.	+	0	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00140_ch_T0000084;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000084;transcript_name=HG00140_ch_T0000084;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000084:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1154139	1165126	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00140_ch_T0000084;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000084;transcript_name=HG00140_ch_T0000084;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000084:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1165127	1165223	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00140_ch_T0000084;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000084;transcript_name=HG00140_ch_T0000084;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000084:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1165127	1165174	.	+	0	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00140_ch_T0000084;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000084;transcript_name=HG00140_ch_T0000084;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000084:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	1165172	1165174	.	+	0	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00140_ch_T0000084;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000084;transcript_name=HG00140_ch_T0000084;gene_name=CSF2RA;ID=stop_codon:HG00140_ch_T0000084;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1165224	1166649	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00140_ch_T0000084;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000084;transcript_name=HG00140_ch_T0000084;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000084:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1166650	1166731	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00140_ch_T0000084;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000084;transcript_name=HG00140_ch_T0000084;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000084:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1166732	1170960	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00140_ch_T0000084;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000084;transcript_name=HG00140_ch_T0000084;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000084:10;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1170961	1171493	.	+	.	source_transcript=ENST00000711225.1;source_transcript_name=CSF2RA-235;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711225.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711225.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711225.1,ENST00000711225.1;transcript_id=HG00140_ch_T0000084;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000084;transcript_name=HG00140_ch_T0000084;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000084:11;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1141378	1171197	100	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00140_ch_T0000085;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_G0000022;transcript_name=HG00140_ch_T0000085;gene_name=CSF2RA;ID=HG00140_ch_T0000085;Name=CSF2RA
HG00140_chrY	CAT	exon	1141378	1141471	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00140_ch_T0000085;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000085;transcript_name=HG00140_ch_T0000085;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000085:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1141396	1141471	.	+	0	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00140_ch_T0000085;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000085;transcript_name=HG00140_ch_T0000085;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000085:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	1141396	1141398	.	+	0	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00140_ch_T0000085;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000085;transcript_name=HG00140_ch_T0000085;gene_name=CSF2RA;ID=start_codon:HG00140_ch_T0000085;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1141472	1144466	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00140_ch_T0000085;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000085;transcript_name=HG00140_ch_T0000085;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000085:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1144467	1144609	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00140_ch_T0000085;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000085;transcript_name=HG00140_ch_T0000085;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000085:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1144467	1144609	.	+	2	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00140_ch_T0000085;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000085;transcript_name=HG00140_ch_T0000085;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000085:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1144610	1147202	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00140_ch_T0000085;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000085;transcript_name=HG00140_ch_T0000085;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000085:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1147203	1147326	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00140_ch_T0000085;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000085;transcript_name=HG00140_ch_T0000085;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000085:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1147203	1147326	.	+	0	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00140_ch_T0000085;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000085;transcript_name=HG00140_ch_T0000085;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000085:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1147327	1147442	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00140_ch_T0000085;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000085;transcript_name=HG00140_ch_T0000085;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000085:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1147443	1147572	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00140_ch_T0000085;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000085;transcript_name=HG00140_ch_T0000085;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000085:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1147443	1147572	.	+	2	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00140_ch_T0000085;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000085;transcript_name=HG00140_ch_T0000085;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000085:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1147573	1149018	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00140_ch_T0000085;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000085;transcript_name=HG00140_ch_T0000085;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000085:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1149019	1149191	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00140_ch_T0000085;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000085;transcript_name=HG00140_ch_T0000085;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000085:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1149019	1149191	.	+	1	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00140_ch_T0000085;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000085;transcript_name=HG00140_ch_T0000085;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000085:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1149192	1153009	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00140_ch_T0000085;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000085;transcript_name=HG00140_ch_T0000085;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000085:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1153010	1153143	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00140_ch_T0000085;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000085;transcript_name=HG00140_ch_T0000085;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000085:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1153010	1153143	.	+	2	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00140_ch_T0000085;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000085;transcript_name=HG00140_ch_T0000085;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000085:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1153144	1154108	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00140_ch_T0000085;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000085;transcript_name=HG00140_ch_T0000085;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000085:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1154109	1154138	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00140_ch_T0000085;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000085;transcript_name=HG00140_ch_T0000085;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000085:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1154109	1154138	.	+	0	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00140_ch_T0000085;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000085;transcript_name=HG00140_ch_T0000085;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000085:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1154139	1161696	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00140_ch_T0000085;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000085;transcript_name=HG00140_ch_T0000085;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000085:6;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1161697	1161832	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00140_ch_T0000085;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000085;transcript_name=HG00140_ch_T0000085;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000085:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1161697	1161832	.	+	0	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00140_ch_T0000085;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000085;transcript_name=HG00140_ch_T0000085;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000085:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1161833	1166649	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00140_ch_T0000085;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000085;transcript_name=HG00140_ch_T0000085;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000085:7;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1166650	1166731	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00140_ch_T0000085;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000085;transcript_name=HG00140_ch_T0000085;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000085:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1166650	1166705	.	+	2	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00140_ch_T0000085;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000085;transcript_name=HG00140_ch_T0000085;gene_name=CSF2RA;ID=CDS:HG00140_ch_T0000085:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	1166703	1166705	.	+	0	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00140_ch_T0000085;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000085;transcript_name=HG00140_ch_T0000085;gene_name=CSF2RA;ID=stop_codon:HG00140_ch_T0000085;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1166732	1170960	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00140_ch_T0000085;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000085;transcript_name=HG00140_ch_T0000085;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000085:8;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1170961	1171197	.	+	.	source_transcript=ENST00000711226.1;source_transcript_name=CSF2RA-236;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711226.1,ENST00000711226.1;transcript_id=HG00140_ch_T0000085;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000085;transcript_name=HG00140_ch_T0000085;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000085:9;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1144341	1147324	1000	+	.	source_transcript=ENST00000711227.1;source_transcript_name=CSF2RA-237;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711227.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711227.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711227.1,ENST00000711227.1;transcript_id=HG00140_ch_T0000086;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_G0000022;transcript_name=HG00140_ch_T0000086;gene_name=CSF2RA;ID=HG00140_ch_T0000086;Name=CSF2RA
HG00140_chrY	CAT	exon	1144341	1144609	.	+	.	source_transcript=ENST00000711227.1;source_transcript_name=CSF2RA-237;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711227.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711227.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711227.1,ENST00000711227.1;transcript_id=HG00140_ch_T0000086;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000086;transcript_name=HG00140_ch_T0000086;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000086:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1144610	1147202	.	+	.	source_transcript=ENST00000711227.1;source_transcript_name=CSF2RA-237;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711227.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711227.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711227.1,ENST00000711227.1;transcript_id=HG00140_ch_T0000086;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000086;transcript_name=HG00140_ch_T0000086;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000086:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1147203	1147324	.	+	.	source_transcript=ENST00000711227.1;source_transcript_name=CSF2RA-237;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711227.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711227.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711227.1,ENST00000711227.1;transcript_id=HG00140_ch_T0000086;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000086;transcript_name=HG00140_ch_T0000086;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000086:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1147282	1147787	1000	+	.	source_transcript=ENST00000711228.1;source_transcript_name=CSF2RA-238;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711228.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711228.1;transcript_score=298.98;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711228.1,ENST00000711228.1;transcript_id=HG00140_ch_T0000087;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_G0000022;transcript_name=HG00140_ch_T0000087;gene_name=CSF2RA;ID=HG00140_ch_T0000087;Name=CSF2RA
HG00140_chrY	CAT	exon	1147282	1147326	.	+	.	source_transcript=ENST00000711228.1;source_transcript_name=CSF2RA-238;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711228.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711228.1;transcript_score=298.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711228.1,ENST00000711228.1;transcript_id=HG00140_ch_T0000087;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000087;transcript_name=HG00140_ch_T0000087;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000087:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1147327	1147442	.	+	.	source_transcript=ENST00000711228.1;source_transcript_name=CSF2RA-238;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711228.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711228.1;transcript_score=298.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711228.1,ENST00000711228.1;transcript_id=HG00140_ch_T0000087;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000087;transcript_name=HG00140_ch_T0000087;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000087:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1147443	1147787	.	+	.	source_transcript=ENST00000711228.1;source_transcript_name=CSF2RA-238;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711228.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711228.1;transcript_score=298.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711228.1,ENST00000711228.1;transcript_id=HG00140_ch_T0000087;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000087;transcript_name=HG00140_ch_T0000087;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000087:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1149135	1171481	1000	+	.	source_transcript=ENST00000711229.1;source_transcript_name=CSF2RA-239;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711229.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711229.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711229.1,ENST00000711229.1;transcript_id=HG00140_ch_T0000088;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_G0000022;transcript_name=HG00140_ch_T0000088;gene_name=CSF2RA;ID=HG00140_ch_T0000088;Name=CSF2RA
HG00140_chrY	CAT	exon	1149135	1149191	.	+	.	source_transcript=ENST00000711229.1;source_transcript_name=CSF2RA-239;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711229.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711229.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711229.1,ENST00000711229.1;transcript_id=HG00140_ch_T0000088;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000088;transcript_name=HG00140_ch_T0000088;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000088:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1149192	1153009	.	+	.	source_transcript=ENST00000711229.1;source_transcript_name=CSF2RA-239;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711229.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711229.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711229.1,ENST00000711229.1;transcript_id=HG00140_ch_T0000088;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000088;transcript_name=HG00140_ch_T0000088;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000088:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1153010	1153143	.	+	.	source_transcript=ENST00000711229.1;source_transcript_name=CSF2RA-239;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711229.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711229.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711229.1,ENST00000711229.1;transcript_id=HG00140_ch_T0000088;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000088;transcript_name=HG00140_ch_T0000088;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000088:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1153144	1154108	.	+	.	source_transcript=ENST00000711229.1;source_transcript_name=CSF2RA-239;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711229.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711229.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711229.1,ENST00000711229.1;transcript_id=HG00140_ch_T0000088;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000088;transcript_name=HG00140_ch_T0000088;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000088:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1154109	1154138	.	+	.	source_transcript=ENST00000711229.1;source_transcript_name=CSF2RA-239;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711229.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711229.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711229.1,ENST00000711229.1;transcript_id=HG00140_ch_T0000088;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000088;transcript_name=HG00140_ch_T0000088;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000088:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1154139	1161696	.	+	.	source_transcript=ENST00000711229.1;source_transcript_name=CSF2RA-239;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711229.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711229.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711229.1,ENST00000711229.1;transcript_id=HG00140_ch_T0000088;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000088;transcript_name=HG00140_ch_T0000088;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000088:2;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1161697	1161832	.	+	.	source_transcript=ENST00000711229.1;source_transcript_name=CSF2RA-239;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711229.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711229.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711229.1,ENST00000711229.1;transcript_id=HG00140_ch_T0000088;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000088;transcript_name=HG00140_ch_T0000088;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000088:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1161833	1164100	.	+	.	source_transcript=ENST00000711229.1;source_transcript_name=CSF2RA-239;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711229.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711229.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711229.1,ENST00000711229.1;transcript_id=HG00140_ch_T0000088;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000088;transcript_name=HG00140_ch_T0000088;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000088:3;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1164101	1164120	.	+	.	source_transcript=ENST00000711229.1;source_transcript_name=CSF2RA-239;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711229.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711229.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711229.1,ENST00000711229.1;transcript_id=HG00140_ch_T0000088;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000088;transcript_name=HG00140_ch_T0000088;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000088:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1164121	1171382	.	+	.	source_transcript=ENST00000711229.1;source_transcript_name=CSF2RA-239;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711229.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711229.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711229.1,ENST00000711229.1;transcript_id=HG00140_ch_T0000088;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000088;transcript_name=HG00140_ch_T0000088;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000088:4;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1171383	1171481	.	+	.	source_transcript=ENST00000711229.1;source_transcript_name=CSF2RA-239;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711229.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711229.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711229.1,ENST00000711229.1;transcript_id=HG00140_ch_T0000088;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000088;transcript_name=HG00140_ch_T0000088;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000088:5;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1152907	1154260	1000	+	.	source_transcript=ENST00000711230.1;source_transcript_name=CSF2RA-240;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711230.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711230.1,ENST00000711230.1;transcript_id=HG00140_ch_T0000091;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_G0000022;transcript_name=HG00140_ch_T0000091;gene_name=CSF2RA;ID=HG00140_ch_T0000091;Name=CSF2RA
HG00140_chrY	CAT	exon	1152907	1153143	.	+	.	source_transcript=ENST00000711230.1;source_transcript_name=CSF2RA-240;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711230.1,ENST00000711230.1;transcript_id=HG00140_ch_T0000091;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000091;transcript_name=HG00140_ch_T0000091;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000091:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1153144	1154108	.	+	.	source_transcript=ENST00000711230.1;source_transcript_name=CSF2RA-240;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711230.1,ENST00000711230.1;transcript_id=HG00140_ch_T0000091;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000091;transcript_name=HG00140_ch_T0000091;gene_name=CSF2RA;ID=intron:HG00140_ch_T0000091:0;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1154109	1154260	.	+	.	source_transcript=ENST00000711230.1;source_transcript_name=CSF2RA-240;source_gene=ENSG00000292357.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292357.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711230.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=ENST00000711230.1,ENST00000711230.1;transcript_id=HG00140_ch_T0000091;gene_id=HG00140_ch_G0000022;Parent=HG00140_ch_T0000091;transcript_name=HG00140_ch_T0000091;gene_name=CSF2RA;ID=exon:HG00140_ch_T0000091:1;Name=CSF2RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	1152297	1152371	.	+	.	source_gene_common_name=MIR3690;source_gene=ENSG00000292355.1;gene_id=HG00140_ch_G0000023;gene_biotype=miRNA;gene_name=MIR3690;gene_sources=liftoff;ID=HG00140_ch_G0000023;Name=MIR3690
HG00140_chrY	CAT	transcript	1152297	1152371	1000	+	.	source_transcript=ENST00000711140.1;source_transcript_name=MIR3690-202;source_gene=ENSG00000292355.1;source_gene_biotype=miRNA;original_gene_id=ENSG00000292355.1;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=ENST00000711140.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711140.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;transcript_id=HG00140_ch_T0000089;gene_id=HG00140_ch_G0000023;Parent=HG00140_ch_G0000023;transcript_name=HG00140_ch_T0000089;gene_name=MIR3690;ID=HG00140_ch_T0000089;Name=MIR3690
HG00140_chrY	CAT	exon	1152297	1152371	.	+	.	source_transcript=ENST00000711140.1;source_transcript_name=MIR3690-202;source_gene=ENSG00000292355.1;source_gene_biotype=miRNA;original_gene_id=ENSG00000292355.1;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=ENST00000711140.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711140.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;transcript_id=HG00140_ch_T0000089;gene_id=HG00140_ch_G0000023;Parent=HG00140_ch_T0000089;transcript_name=HG00140_ch_T0000089;gene_name=MIR3690;ID=exon:HG00140_ch_T0000089:0;Name=MIR3690;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	1152600	1152674	.	+	.	source_gene_common_name=MIR3690;source_gene=ENSG00000292355.1;alternative_source_transcripts=ENST00000711140.1,ENST00000711140.1;gene_id=HG00140_ch_G0000024;gene_biotype=miRNA;gene_name=MIR3690;gene_sources=liftoff;ID=HG00140_ch_G0000024;Name=MIR3690
HG00140_chrY	CAT	transcript	1152600	1152674	1000	+	.	source_transcript=ENST00000711140.1;source_transcript_name=MIR3690-202;source_gene=ENSG00000292355.1;source_gene_biotype=miRNA;original_gene_id=ENSG00000292355.1;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=ENST00000711140.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711140.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=ENST00000711140.1,ENST00000711140.1;transcript_id=HG00140_ch_T0000090;gene_id=HG00140_ch_G0000024;Parent=HG00140_ch_G0000024;transcript_name=HG00140_ch_T0000090;gene_name=MIR3690;ID=HG00140_ch_T0000090;Name=MIR3690
HG00140_chrY	CAT	exon	1152600	1152674	.	+	.	source_transcript=ENST00000711140.1;source_transcript_name=MIR3690-202;source_gene=ENSG00000292355.1;source_gene_biotype=miRNA;original_gene_id=ENSG00000292355.1;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=ENST00000711140.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711140.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=ENST00000711140.1,ENST00000711140.1;transcript_id=HG00140_ch_T0000090;gene_id=HG00140_ch_G0000024;Parent=HG00140_ch_T0000090;transcript_name=HG00140_ch_T0000090;gene_name=MIR3690;ID=exon:HG00140_ch_T0000090:0;Name=MIR3690;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	1161462	1161581	.	-	.	source_gene_common_name=RNA5SP498;source_gene=ENSG00000292356.1;alternative_source_transcripts=ENST00000711139.1,ENST00000711139.1;gene_id=HG00140_ch_G0000025;gene_biotype=rRNA_pseudogene;gene_name=RNA5SP498;gene_sources=liftoff;ID=HG00140_ch_G0000025;Name=RNA5SP498
HG00140_chrY	CAT	transcript	1161462	1161581	1000	-	.	source_transcript=ENST00000711139.1;source_transcript_name=RNA5SP498-202;source_gene=ENSG00000292356.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000292356.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000711139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711139.1;transcript_score=199.167;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP498;alternative_source_transcripts=ENST00000711139.1,ENST00000711139.1;transcript_id=HG00140_ch_T0000092;gene_id=HG00140_ch_G0000025;Parent=HG00140_ch_G0000025;transcript_name=HG00140_ch_T0000092;gene_name=RNA5SP498;ID=HG00140_ch_T0000092;Name=RNA5SP498
HG00140_chrY	CAT	exon	1161462	1161581	.	-	.	source_transcript=ENST00000711139.1;source_transcript_name=RNA5SP498-202;source_gene=ENSG00000292356.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000292356.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000711139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711139.1;transcript_score=199.167;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP498;alternative_source_transcripts=ENST00000711139.1,ENST00000711139.1;transcript_id=HG00140_ch_T0000092;gene_id=HG00140_ch_G0000025;Parent=HG00140_ch_T0000092;transcript_name=HG00140_ch_T0000092;gene_name=RNA5SP498;ID=exon:HG00140_ch_T0000092:0;Name=RNA5SP498;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	1212622	1252269	.	+	.	source_gene_common_name=IL3RA;source_gene=ENSG00000292332.1;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;gene_id=HG00140_ch_G0000026;gene_biotype=protein_coding;gene_name=IL3RA;gene_sources=liftoff;ID=HG00140_ch_G0000026;Name=IL3RA
HG00140_chrY	CAT	transcript	1212622	1252269	100	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00140_ch_T0000093;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_G0000026;transcript_name=HG00140_ch_T0000093;gene_name=IL3RA;ID=HG00140_ch_T0000093;Name=IL3RA
HG00140_chrY	CAT	exon	1212622	1212932	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00140_ch_T0000093;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000093;transcript_name=HG00140_ch_T0000093;gene_name=IL3RA;ID=exon:HG00140_ch_T0000093:0;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1212933	1217730	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00140_ch_T0000093;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000093;transcript_name=HG00140_ch_T0000093;gene_name=IL3RA;ID=intron:HG00140_ch_T0000093:0;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1217731	1217832	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00140_ch_T0000093;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000093;transcript_name=HG00140_ch_T0000093;gene_name=IL3RA;ID=exon:HG00140_ch_T0000093:1;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1217769	1217832	.	+	0	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00140_ch_T0000093;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000093;transcript_name=HG00140_ch_T0000093;gene_name=IL3RA;ID=CDS:HG00140_ch_T0000093:0;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	1217769	1217771	.	+	0	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00140_ch_T0000093;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000093;transcript_name=HG00140_ch_T0000093;gene_name=IL3RA;ID=start_codon:HG00140_ch_T0000093;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1217833	1228114	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00140_ch_T0000093;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000093;transcript_name=HG00140_ch_T0000093;gene_name=IL3RA;ID=intron:HG00140_ch_T0000093:1;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1228115	1228247	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00140_ch_T0000093;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000093;transcript_name=HG00140_ch_T0000093;gene_name=IL3RA;ID=exon:HG00140_ch_T0000093:2;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1228115	1228247	.	+	2	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00140_ch_T0000093;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000093;transcript_name=HG00140_ch_T0000093;gene_name=IL3RA;ID=CDS:HG00140_ch_T0000093:1;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1228248	1228336	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00140_ch_T0000093;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000093;transcript_name=HG00140_ch_T0000093;gene_name=IL3RA;ID=intron:HG00140_ch_T0000093:2;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1228337	1228521	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00140_ch_T0000093;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000093;transcript_name=HG00140_ch_T0000093;gene_name=IL3RA;ID=exon:HG00140_ch_T0000093:3;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1228337	1228521	.	+	1	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00140_ch_T0000093;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000093;transcript_name=HG00140_ch_T0000093;gene_name=IL3RA;ID=CDS:HG00140_ch_T0000093:2;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1228522	1232195	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00140_ch_T0000093;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000093;transcript_name=HG00140_ch_T0000093;gene_name=IL3RA;ID=intron:HG00140_ch_T0000093:3;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1232196	1232311	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00140_ch_T0000093;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000093;transcript_name=HG00140_ch_T0000093;gene_name=IL3RA;ID=exon:HG00140_ch_T0000093:4;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1232196	1232311	.	+	2	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00140_ch_T0000093;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000093;transcript_name=HG00140_ch_T0000093;gene_name=IL3RA;ID=CDS:HG00140_ch_T0000093:3;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1232312	1234836	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00140_ch_T0000093;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000093;transcript_name=HG00140_ch_T0000093;gene_name=IL3RA;ID=intron:HG00140_ch_T0000093:4;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1234837	1234863	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00140_ch_T0000093;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000093;transcript_name=HG00140_ch_T0000093;gene_name=IL3RA;ID=exon:HG00140_ch_T0000093:5;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1234837	1234863	.	+	0	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00140_ch_T0000093;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000093;transcript_name=HG00140_ch_T0000093;gene_name=IL3RA;ID=CDS:HG00140_ch_T0000093:4;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1234864	1241405	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00140_ch_T0000093;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000093;transcript_name=HG00140_ch_T0000093;gene_name=IL3RA;ID=intron:HG00140_ch_T0000093:5;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1241406	1241520	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00140_ch_T0000093;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000093;transcript_name=HG00140_ch_T0000093;gene_name=IL3RA;ID=exon:HG00140_ch_T0000093:6;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1241406	1241520	.	+	0	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00140_ch_T0000093;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000093;transcript_name=HG00140_ch_T0000093;gene_name=IL3RA;ID=CDS:HG00140_ch_T0000093:5;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1241521	1248176	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00140_ch_T0000093;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000093;transcript_name=HG00140_ch_T0000093;gene_name=IL3RA;ID=intron:HG00140_ch_T0000093:6;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1248177	1248282	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00140_ch_T0000093;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000093;transcript_name=HG00140_ch_T0000093;gene_name=IL3RA;ID=exon:HG00140_ch_T0000093:7;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1248177	1248282	.	+	2	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00140_ch_T0000093;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000093;transcript_name=HG00140_ch_T0000093;gene_name=IL3RA;ID=CDS:HG00140_ch_T0000093:6;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1248283	1250560	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00140_ch_T0000093;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000093;transcript_name=HG00140_ch_T0000093;gene_name=IL3RA;ID=intron:HG00140_ch_T0000093:7;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1250561	1250642	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00140_ch_T0000093;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000093;transcript_name=HG00140_ch_T0000093;gene_name=IL3RA;ID=exon:HG00140_ch_T0000093:8;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1250561	1250642	.	+	1	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00140_ch_T0000093;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000093;transcript_name=HG00140_ch_T0000093;gene_name=IL3RA;ID=CDS:HG00140_ch_T0000093:7;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1250643	1251969	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00140_ch_T0000093;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000093;transcript_name=HG00140_ch_T0000093;gene_name=IL3RA;ID=intron:HG00140_ch_T0000093:8;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1251970	1252269	.	+	.	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00140_ch_T0000093;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000093;transcript_name=HG00140_ch_T0000093;gene_name=IL3RA;ID=exon:HG00140_ch_T0000093:9;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1251970	1252044	.	+	0	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00140_ch_T0000093;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000093;transcript_name=HG00140_ch_T0000093;gene_name=IL3RA;ID=CDS:HG00140_ch_T0000093:8;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	1252042	1252044	.	+	0	source_transcript=ENST00000711217.1;source_transcript_name=IL3RA-204;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711217.1,ENST00000711217.1;transcript_id=HG00140_ch_T0000093;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000093;transcript_name=HG00140_ch_T0000093;gene_name=IL3RA;ID=stop_codon:HG00140_ch_T0000093;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1212791	1252269	100	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00140_ch_T0000094;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_G0000026;transcript_name=HG00140_ch_T0000094;gene_name=IL3RA;ID=HG00140_ch_T0000094;Name=IL3RA
HG00140_chrY	CAT	exon	1212791	1212932	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00140_ch_T0000094;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000094;transcript_name=HG00140_ch_T0000094;gene_name=IL3RA;ID=exon:HG00140_ch_T0000094:0;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1212933	1217730	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00140_ch_T0000094;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000094;transcript_name=HG00140_ch_T0000094;gene_name=IL3RA;ID=intron:HG00140_ch_T0000094:0;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1217731	1217832	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00140_ch_T0000094;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000094;transcript_name=HG00140_ch_T0000094;gene_name=IL3RA;ID=exon:HG00140_ch_T0000094:1;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1217769	1217832	.	+	0	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00140_ch_T0000094;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000094;transcript_name=HG00140_ch_T0000094;gene_name=IL3RA;ID=CDS:HG00140_ch_T0000094:0;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	1217769	1217771	.	+	0	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00140_ch_T0000094;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000094;transcript_name=HG00140_ch_T0000094;gene_name=IL3RA;ID=start_codon:HG00140_ch_T0000094;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1217833	1221324	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00140_ch_T0000094;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000094;transcript_name=HG00140_ch_T0000094;gene_name=IL3RA;ID=intron:HG00140_ch_T0000094:1;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1221325	1221443	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00140_ch_T0000094;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000094;transcript_name=HG00140_ch_T0000094;gene_name=IL3RA;ID=exon:HG00140_ch_T0000094:2;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1221325	1221443	.	+	2	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00140_ch_T0000094;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000094;transcript_name=HG00140_ch_T0000094;gene_name=IL3RA;ID=CDS:HG00140_ch_T0000094:1;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1221444	1224441	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00140_ch_T0000094;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000094;transcript_name=HG00140_ch_T0000094;gene_name=IL3RA;ID=intron:HG00140_ch_T0000094:2;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1224442	1224556	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00140_ch_T0000094;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000094;transcript_name=HG00140_ch_T0000094;gene_name=IL3RA;ID=exon:HG00140_ch_T0000094:3;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1224442	1224556	.	+	0	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00140_ch_T0000094;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000094;transcript_name=HG00140_ch_T0000094;gene_name=IL3RA;ID=CDS:HG00140_ch_T0000094:2;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1224557	1228114	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00140_ch_T0000094;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000094;transcript_name=HG00140_ch_T0000094;gene_name=IL3RA;ID=intron:HG00140_ch_T0000094:3;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1228115	1228247	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00140_ch_T0000094;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000094;transcript_name=HG00140_ch_T0000094;gene_name=IL3RA;ID=exon:HG00140_ch_T0000094:4;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1228115	1228247	.	+	2	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00140_ch_T0000094;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000094;transcript_name=HG00140_ch_T0000094;gene_name=IL3RA;ID=CDS:HG00140_ch_T0000094:3;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1228248	1228336	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00140_ch_T0000094;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000094;transcript_name=HG00140_ch_T0000094;gene_name=IL3RA;ID=intron:HG00140_ch_T0000094:4;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1228337	1228521	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00140_ch_T0000094;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000094;transcript_name=HG00140_ch_T0000094;gene_name=IL3RA;ID=exon:HG00140_ch_T0000094:5;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1228337	1228521	.	+	1	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00140_ch_T0000094;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000094;transcript_name=HG00140_ch_T0000094;gene_name=IL3RA;ID=CDS:HG00140_ch_T0000094:4;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1228522	1232195	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00140_ch_T0000094;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000094;transcript_name=HG00140_ch_T0000094;gene_name=IL3RA;ID=intron:HG00140_ch_T0000094:5;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1232196	1232311	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00140_ch_T0000094;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000094;transcript_name=HG00140_ch_T0000094;gene_name=IL3RA;ID=exon:HG00140_ch_T0000094:6;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1232196	1232311	.	+	2	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00140_ch_T0000094;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000094;transcript_name=HG00140_ch_T0000094;gene_name=IL3RA;ID=CDS:HG00140_ch_T0000094:5;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1232312	1234836	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00140_ch_T0000094;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000094;transcript_name=HG00140_ch_T0000094;gene_name=IL3RA;ID=intron:HG00140_ch_T0000094:6;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1234837	1234863	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00140_ch_T0000094;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000094;transcript_name=HG00140_ch_T0000094;gene_name=IL3RA;ID=exon:HG00140_ch_T0000094:7;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1234837	1234863	.	+	0	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00140_ch_T0000094;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000094;transcript_name=HG00140_ch_T0000094;gene_name=IL3RA;ID=CDS:HG00140_ch_T0000094:6;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1234864	1241405	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00140_ch_T0000094;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000094;transcript_name=HG00140_ch_T0000094;gene_name=IL3RA;ID=intron:HG00140_ch_T0000094:7;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1241406	1241520	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00140_ch_T0000094;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000094;transcript_name=HG00140_ch_T0000094;gene_name=IL3RA;ID=exon:HG00140_ch_T0000094:8;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1241406	1241520	.	+	0	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00140_ch_T0000094;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000094;transcript_name=HG00140_ch_T0000094;gene_name=IL3RA;ID=CDS:HG00140_ch_T0000094:7;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1241521	1248176	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00140_ch_T0000094;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000094;transcript_name=HG00140_ch_T0000094;gene_name=IL3RA;ID=intron:HG00140_ch_T0000094:8;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1248177	1248282	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00140_ch_T0000094;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000094;transcript_name=HG00140_ch_T0000094;gene_name=IL3RA;ID=exon:HG00140_ch_T0000094:9;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1248177	1248282	.	+	2	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00140_ch_T0000094;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000094;transcript_name=HG00140_ch_T0000094;gene_name=IL3RA;ID=CDS:HG00140_ch_T0000094:8;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1248283	1250560	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00140_ch_T0000094;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000094;transcript_name=HG00140_ch_T0000094;gene_name=IL3RA;ID=intron:HG00140_ch_T0000094:9;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1250561	1250642	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00140_ch_T0000094;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000094;transcript_name=HG00140_ch_T0000094;gene_name=IL3RA;ID=exon:HG00140_ch_T0000094:10;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1250561	1250642	.	+	1	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00140_ch_T0000094;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000094;transcript_name=HG00140_ch_T0000094;gene_name=IL3RA;ID=CDS:HG00140_ch_T0000094:9;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1250643	1251969	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00140_ch_T0000094;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000094;transcript_name=HG00140_ch_T0000094;gene_name=IL3RA;ID=intron:HG00140_ch_T0000094:10;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1251970	1252269	.	+	.	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00140_ch_T0000094;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000094;transcript_name=HG00140_ch_T0000094;gene_name=IL3RA;ID=exon:HG00140_ch_T0000094:11;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1251970	1252044	.	+	0	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00140_ch_T0000094;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000094;transcript_name=HG00140_ch_T0000094;gene_name=IL3RA;ID=CDS:HG00140_ch_T0000094:10;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	1252042	1252044	.	+	0	source_transcript=ENST00000711219.1;source_transcript_name=IL3RA-206;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711219.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711219.1,ENST00000711219.1;transcript_id=HG00140_ch_T0000094;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000094;transcript_name=HG00140_ch_T0000094;gene_name=IL3RA;ID=stop_codon:HG00140_ch_T0000094;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1212802	1232306	100	+	.	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=HG00140_ch_T0000095;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_G0000026;transcript_name=HG00140_ch_T0000095;gene_name=IL3RA;ID=HG00140_ch_T0000095;Name=IL3RA
HG00140_chrY	CAT	exon	1212802	1212932	.	+	.	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=HG00140_ch_T0000095;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000095;transcript_name=HG00140_ch_T0000095;gene_name=IL3RA;ID=exon:HG00140_ch_T0000095:0;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1212933	1217730	.	+	.	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=HG00140_ch_T0000095;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000095;transcript_name=HG00140_ch_T0000095;gene_name=IL3RA;ID=intron:HG00140_ch_T0000095:0;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1217731	1217832	.	+	.	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=HG00140_ch_T0000095;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000095;transcript_name=HG00140_ch_T0000095;gene_name=IL3RA;ID=exon:HG00140_ch_T0000095:1;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1217769	1217832	.	+	0	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=HG00140_ch_T0000095;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000095;transcript_name=HG00140_ch_T0000095;gene_name=IL3RA;ID=CDS:HG00140_ch_T0000095:0;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	1217769	1217771	.	+	0	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=HG00140_ch_T0000095;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000095;transcript_name=HG00140_ch_T0000095;gene_name=IL3RA;ID=start_codon:HG00140_ch_T0000095;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1217833	1228114	.	+	.	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=HG00140_ch_T0000095;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000095;transcript_name=HG00140_ch_T0000095;gene_name=IL3RA;ID=intron:HG00140_ch_T0000095:1;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1228115	1228247	.	+	.	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=HG00140_ch_T0000095;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000095;transcript_name=HG00140_ch_T0000095;gene_name=IL3RA;ID=exon:HG00140_ch_T0000095:2;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1228115	1228247	.	+	2	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=HG00140_ch_T0000095;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000095;transcript_name=HG00140_ch_T0000095;gene_name=IL3RA;ID=CDS:HG00140_ch_T0000095:1;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1228248	1228336	.	+	.	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=HG00140_ch_T0000095;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000095;transcript_name=HG00140_ch_T0000095;gene_name=IL3RA;ID=intron:HG00140_ch_T0000095:2;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1228337	1228521	.	+	.	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=HG00140_ch_T0000095;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000095;transcript_name=HG00140_ch_T0000095;gene_name=IL3RA;ID=exon:HG00140_ch_T0000095:3;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1228337	1228521	.	+	1	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=HG00140_ch_T0000095;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000095;transcript_name=HG00140_ch_T0000095;gene_name=IL3RA;ID=CDS:HG00140_ch_T0000095:2;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1228522	1232195	.	+	.	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=HG00140_ch_T0000095;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000095;transcript_name=HG00140_ch_T0000095;gene_name=IL3RA;ID=intron:HG00140_ch_T0000095:3;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1232196	1232306	.	+	.	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=HG00140_ch_T0000095;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000095;transcript_name=HG00140_ch_T0000095;gene_name=IL3RA;ID=exon:HG00140_ch_T0000095:4;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1232196	1232306	.	+	2	source_transcript=ENST00000711218.1;source_transcript_name=IL3RA-205;source_gene=ENSG00000292332.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292332.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=ENST00000711218.1,ENST00000711218.1;transcript_id=HG00140_ch_T0000095;gene_id=HG00140_ch_G0000026;Parent=HG00140_ch_T0000095;transcript_name=HG00140_ch_T0000095;gene_name=IL3RA;ID=CDS:HG00140_ch_T0000095:3;Name=IL3RA;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	1213171	1217820	.	-	.	source_gene_common_name=ENSG00000310549;source_gene=ENSG00000310549.1;alternative_source_transcripts=ENST00000850718.1,ENST00000850718.1;gene_id=HG00140_ch_G0000027;gene_biotype=lncRNA;gene_name=ENSG00000310549;gene_sources=liftoff;ID=HG00140_ch_G0000027;Name=ENSG00000310549
HG00140_chrY	CAT	transcript	1213171	1217820	1000	-	.	source_transcript=ENST00000850718.1;source_transcript_name=ENST00000850718;source_gene=ENSG00000310549.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310549.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850718.1;transcript_score=299.65;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310549;alternative_source_transcripts=ENST00000850718.1,ENST00000850718.1;transcript_id=HG00140_ch_T0000096;gene_id=HG00140_ch_G0000027;Parent=HG00140_ch_G0000027;transcript_name=HG00140_ch_T0000096;gene_name=ENSG00000310549;ID=HG00140_ch_T0000096;Name=ENSG00000310549
HG00140_chrY	CAT	exon	1213171	1213522	.	-	.	source_transcript=ENST00000850718.1;source_transcript_name=ENST00000850718;source_gene=ENSG00000310549.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310549.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850718.1;transcript_score=299.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310549;alternative_source_transcripts=ENST00000850718.1,ENST00000850718.1;transcript_id=HG00140_ch_T0000096;gene_id=HG00140_ch_G0000027;Parent=HG00140_ch_T0000096;transcript_name=HG00140_ch_T0000096;gene_name=ENSG00000310549;ID=exon:HG00140_ch_T0000096:0;Name=ENSG00000310549;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1213523	1217600	.	-	.	source_transcript=ENST00000850718.1;source_transcript_name=ENST00000850718;source_gene=ENSG00000310549.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310549.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850718.1;transcript_score=299.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310549;alternative_source_transcripts=ENST00000850718.1,ENST00000850718.1;transcript_id=HG00140_ch_T0000096;gene_id=HG00140_ch_G0000027;Parent=HG00140_ch_T0000096;transcript_name=HG00140_ch_T0000096;gene_name=ENSG00000310549;ID=intron:HG00140_ch_T0000096:0;Name=ENSG00000310549;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1217601	1217820	.	-	.	source_transcript=ENST00000850718.1;source_transcript_name=ENST00000850718;source_gene=ENSG00000310549.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310549.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850718.1;transcript_score=299.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310549;alternative_source_transcripts=ENST00000850718.1,ENST00000850718.1;transcript_id=HG00140_ch_T0000096;gene_id=HG00140_ch_G0000027;Parent=HG00140_ch_T0000096;transcript_name=HG00140_ch_T0000096;gene_name=ENSG00000310549;ID=exon:HG00140_ch_T0000096:1;Name=ENSG00000310549;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1214645	1217818	1000	-	.	source_transcript=ENST00000850719.1;source_transcript_name=ENST00000850719;source_gene=ENSG00000310549.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310549.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850719.1;transcript_score=299.45799999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310549;alternative_source_transcripts=ENST00000850719.1,ENST00000850719.1;transcript_id=HG00140_ch_T0000097;gene_id=HG00140_ch_G0000027;Parent=HG00140_ch_G0000027;transcript_name=HG00140_ch_T0000097;gene_name=ENSG00000310549;ID=HG00140_ch_T0000097;Name=ENSG00000310549
HG00140_chrY	CAT	exon	1214645	1214795	.	-	.	source_transcript=ENST00000850719.1;source_transcript_name=ENST00000850719;source_gene=ENSG00000310549.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310549.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850719.1;transcript_score=299.45799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310549;alternative_source_transcripts=ENST00000850719.1,ENST00000850719.1;transcript_id=HG00140_ch_T0000097;gene_id=HG00140_ch_G0000027;Parent=HG00140_ch_T0000097;transcript_name=HG00140_ch_T0000097;gene_name=ENSG00000310549;ID=exon:HG00140_ch_T0000097:0;Name=ENSG00000310549;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1214796	1217600	.	-	.	source_transcript=ENST00000850719.1;source_transcript_name=ENST00000850719;source_gene=ENSG00000310549.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310549.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850719.1;transcript_score=299.45799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310549;alternative_source_transcripts=ENST00000850719.1,ENST00000850719.1;transcript_id=HG00140_ch_T0000097;gene_id=HG00140_ch_G0000027;Parent=HG00140_ch_T0000097;transcript_name=HG00140_ch_T0000097;gene_name=ENSG00000310549;ID=intron:HG00140_ch_T0000097:0;Name=ENSG00000310549;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1217601	1217818	.	-	.	source_transcript=ENST00000850719.1;source_transcript_name=ENST00000850719;source_gene=ENSG00000310549.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310549.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850719.1;transcript_score=299.45799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310549;alternative_source_transcripts=ENST00000850719.1,ENST00000850719.1;transcript_id=HG00140_ch_T0000097;gene_id=HG00140_ch_G0000027;Parent=HG00140_ch_T0000097;transcript_name=HG00140_ch_T0000097;gene_name=ENSG00000310549;ID=exon:HG00140_ch_T0000097:1;Name=ENSG00000310549;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	1255722	1261803	.	-	.	source_gene_common_name=SLC25A6;source_gene=ENSG00000292334.1;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;gene_id=HG00140_ch_G0000028;gene_biotype=protein_coding;gene_name=SLC25A6;gene_sources=liftoff;ID=HG00140_ch_G0000028;Name=SLC25A6
HG00140_chrY	CAT	transcript	1255722	1261803	100	-	.	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=HG00140_ch_T0000098;gene_id=HG00140_ch_G0000028;Parent=HG00140_ch_G0000028;transcript_name=HG00140_ch_T0000098;gene_name=SLC25A6;ID=HG00140_ch_T0000098;Name=SLC25A6
HG00140_chrY	CAT	exon	1255722	1256329	.	-	.	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=HG00140_ch_T0000098;gene_id=HG00140_ch_G0000028;Parent=HG00140_ch_T0000098;transcript_name=HG00140_ch_T0000098;gene_name=SLC25A6;ID=exon:HG00140_ch_T0000098:0;Name=SLC25A6;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1256172	1256329	.	-	2	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=HG00140_ch_T0000098;gene_id=HG00140_ch_G0000028;Parent=HG00140_ch_T0000098;transcript_name=HG00140_ch_T0000098;gene_name=SLC25A6;ID=CDS:HG00140_ch_T0000098:0;Name=SLC25A6;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	1256172	1256174	.	-	0	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=HG00140_ch_T0000098;gene_id=HG00140_ch_G0000028;Parent=HG00140_ch_T0000098;transcript_name=HG00140_ch_T0000098;gene_name=SLC25A6;ID=stop_codon:HG00140_ch_T0000098;Name=SLC25A6;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1256330	1256848	.	-	.	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=HG00140_ch_T0000098;gene_id=HG00140_ch_G0000028;Parent=HG00140_ch_T0000098;transcript_name=HG00140_ch_T0000098;gene_name=SLC25A6;ID=intron:HG00140_ch_T0000098:0;Name=SLC25A6;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1256849	1256989	.	-	.	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=HG00140_ch_T0000098;gene_id=HG00140_ch_G0000028;Parent=HG00140_ch_T0000098;transcript_name=HG00140_ch_T0000098;gene_name=SLC25A6;ID=exon:HG00140_ch_T0000098:1;Name=SLC25A6;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1256849	1256989	.	-	2	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=HG00140_ch_T0000098;gene_id=HG00140_ch_G0000028;Parent=HG00140_ch_T0000098;transcript_name=HG00140_ch_T0000098;gene_name=SLC25A6;ID=CDS:HG00140_ch_T0000098:1;Name=SLC25A6;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1256990	1258810	.	-	.	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=HG00140_ch_T0000098;gene_id=HG00140_ch_G0000028;Parent=HG00140_ch_T0000098;transcript_name=HG00140_ch_T0000098;gene_name=SLC25A6;ID=intron:HG00140_ch_T0000098:1;Name=SLC25A6;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1258811	1259297	.	-	.	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=HG00140_ch_T0000098;gene_id=HG00140_ch_G0000028;Parent=HG00140_ch_T0000098;transcript_name=HG00140_ch_T0000098;gene_name=SLC25A6;ID=exon:HG00140_ch_T0000098:2;Name=SLC25A6;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1258811	1259297	.	-	0	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=HG00140_ch_T0000098;gene_id=HG00140_ch_G0000028;Parent=HG00140_ch_T0000098;transcript_name=HG00140_ch_T0000098;gene_name=SLC25A6;ID=CDS:HG00140_ch_T0000098:2;Name=SLC25A6;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1259298	1261588	.	-	.	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=HG00140_ch_T0000098;gene_id=HG00140_ch_G0000028;Parent=HG00140_ch_T0000098;transcript_name=HG00140_ch_T0000098;gene_name=SLC25A6;ID=intron:HG00140_ch_T0000098:2;Name=SLC25A6;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1261589	1261803	.	-	.	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=HG00140_ch_T0000098;gene_id=HG00140_ch_G0000028;Parent=HG00140_ch_T0000098;transcript_name=HG00140_ch_T0000098;gene_name=SLC25A6;ID=exon:HG00140_ch_T0000098:3;Name=SLC25A6;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1261589	1261699	.	-	0	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=HG00140_ch_T0000098;gene_id=HG00140_ch_G0000028;Parent=HG00140_ch_T0000098;transcript_name=HG00140_ch_T0000098;gene_name=SLC25A6;ID=CDS:HG00140_ch_T0000098:3;Name=SLC25A6;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	1261697	1261699	.	-	0	source_transcript=ENST00000711214.1;source_transcript_name=SLC25A6-206;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711214.1,ENST00000711214.1;transcript_id=HG00140_ch_T0000098;gene_id=HG00140_ch_G0000028;Parent=HG00140_ch_T0000098;transcript_name=HG00140_ch_T0000098;gene_name=SLC25A6;ID=start_codon:HG00140_ch_T0000098;Name=SLC25A6;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1256881	1261793	1000	-	.	source_transcript=ENST00000711213.1;source_transcript_name=SLC25A6-205;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711213.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711213.1,ENST00000711213.1;transcript_id=HG00140_ch_T0000099;gene_id=HG00140_ch_G0000028;Parent=HG00140_ch_G0000028;transcript_name=HG00140_ch_T0000099;gene_name=SLC25A6;ID=HG00140_ch_T0000099;Name=SLC25A6
HG00140_chrY	CAT	exon	1256881	1256989	.	-	.	source_transcript=ENST00000711213.1;source_transcript_name=SLC25A6-205;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711213.1,ENST00000711213.1;transcript_id=HG00140_ch_T0000099;gene_id=HG00140_ch_G0000028;Parent=HG00140_ch_T0000099;transcript_name=HG00140_ch_T0000099;gene_name=SLC25A6;ID=exon:HG00140_ch_T0000099:0;Name=SLC25A6;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1256990	1258810	.	-	.	source_transcript=ENST00000711213.1;source_transcript_name=SLC25A6-205;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711213.1,ENST00000711213.1;transcript_id=HG00140_ch_T0000099;gene_id=HG00140_ch_G0000028;Parent=HG00140_ch_T0000099;transcript_name=HG00140_ch_T0000099;gene_name=SLC25A6;ID=intron:HG00140_ch_T0000099:0;Name=SLC25A6;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1258811	1259297	.	-	.	source_transcript=ENST00000711213.1;source_transcript_name=SLC25A6-205;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711213.1,ENST00000711213.1;transcript_id=HG00140_ch_T0000099;gene_id=HG00140_ch_G0000028;Parent=HG00140_ch_T0000099;transcript_name=HG00140_ch_T0000099;gene_name=SLC25A6;ID=exon:HG00140_ch_T0000099:1;Name=SLC25A6;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1259298	1259761	.	-	.	source_transcript=ENST00000711213.1;source_transcript_name=SLC25A6-205;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711213.1,ENST00000711213.1;transcript_id=HG00140_ch_T0000099;gene_id=HG00140_ch_G0000028;Parent=HG00140_ch_T0000099;transcript_name=HG00140_ch_T0000099;gene_name=SLC25A6;ID=intron:HG00140_ch_T0000099:1;Name=SLC25A6;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1259762	1259860	.	-	.	source_transcript=ENST00000711213.1;source_transcript_name=SLC25A6-205;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711213.1,ENST00000711213.1;transcript_id=HG00140_ch_T0000099;gene_id=HG00140_ch_G0000028;Parent=HG00140_ch_T0000099;transcript_name=HG00140_ch_T0000099;gene_name=SLC25A6;ID=exon:HG00140_ch_T0000099:2;Name=SLC25A6;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1259861	1261588	.	-	.	source_transcript=ENST00000711213.1;source_transcript_name=SLC25A6-205;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711213.1,ENST00000711213.1;transcript_id=HG00140_ch_T0000099;gene_id=HG00140_ch_G0000028;Parent=HG00140_ch_T0000099;transcript_name=HG00140_ch_T0000099;gene_name=SLC25A6;ID=intron:HG00140_ch_T0000099:2;Name=SLC25A6;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1261589	1261793	.	-	.	source_transcript=ENST00000711213.1;source_transcript_name=SLC25A6-205;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711213.1,ENST00000711213.1;transcript_id=HG00140_ch_T0000099;gene_id=HG00140_ch_G0000028;Parent=HG00140_ch_T0000099;transcript_name=HG00140_ch_T0000099;gene_name=SLC25A6;ID=exon:HG00140_ch_T0000099:3;Name=SLC25A6;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1256915	1261778	1000	-	.	source_transcript=ENST00000711212.1;source_transcript_name=SLC25A6-204;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711212.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711212.1,ENST00000711212.1;transcript_id=HG00140_ch_T0000100;gene_id=HG00140_ch_G0000028;Parent=HG00140_ch_G0000028;transcript_name=HG00140_ch_T0000100;gene_name=SLC25A6;ID=HG00140_ch_T0000100;Name=SLC25A6
HG00140_chrY	CAT	exon	1256915	1256989	.	-	.	source_transcript=ENST00000711212.1;source_transcript_name=SLC25A6-204;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711212.1,ENST00000711212.1;transcript_id=HG00140_ch_T0000100;gene_id=HG00140_ch_G0000028;Parent=HG00140_ch_T0000100;transcript_name=HG00140_ch_T0000100;gene_name=SLC25A6;ID=exon:HG00140_ch_T0000100:0;Name=SLC25A6;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1256990	1258810	.	-	.	source_transcript=ENST00000711212.1;source_transcript_name=SLC25A6-204;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711212.1,ENST00000711212.1;transcript_id=HG00140_ch_T0000100;gene_id=HG00140_ch_G0000028;Parent=HG00140_ch_T0000100;transcript_name=HG00140_ch_T0000100;gene_name=SLC25A6;ID=intron:HG00140_ch_T0000100:0;Name=SLC25A6;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1258811	1259297	.	-	.	source_transcript=ENST00000711212.1;source_transcript_name=SLC25A6-204;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711212.1,ENST00000711212.1;transcript_id=HG00140_ch_T0000100;gene_id=HG00140_ch_G0000028;Parent=HG00140_ch_T0000100;transcript_name=HG00140_ch_T0000100;gene_name=SLC25A6;ID=exon:HG00140_ch_T0000100:1;Name=SLC25A6;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1259298	1259761	.	-	.	source_transcript=ENST00000711212.1;source_transcript_name=SLC25A6-204;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711212.1,ENST00000711212.1;transcript_id=HG00140_ch_T0000100;gene_id=HG00140_ch_G0000028;Parent=HG00140_ch_T0000100;transcript_name=HG00140_ch_T0000100;gene_name=SLC25A6;ID=intron:HG00140_ch_T0000100:1;Name=SLC25A6;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1259762	1259863	.	-	.	source_transcript=ENST00000711212.1;source_transcript_name=SLC25A6-204;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711212.1,ENST00000711212.1;transcript_id=HG00140_ch_T0000100;gene_id=HG00140_ch_G0000028;Parent=HG00140_ch_T0000100;transcript_name=HG00140_ch_T0000100;gene_name=SLC25A6;ID=exon:HG00140_ch_T0000100:2;Name=SLC25A6;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1259864	1261588	.	-	.	source_transcript=ENST00000711212.1;source_transcript_name=SLC25A6-204;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711212.1,ENST00000711212.1;transcript_id=HG00140_ch_T0000100;gene_id=HG00140_ch_G0000028;Parent=HG00140_ch_T0000100;transcript_name=HG00140_ch_T0000100;gene_name=SLC25A6;ID=intron:HG00140_ch_T0000100:2;Name=SLC25A6;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1261589	1261778	.	-	.	source_transcript=ENST00000711212.1;source_transcript_name=SLC25A6-204;source_gene=ENSG00000292334.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292334.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711212.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711212.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=ENST00000711212.1,ENST00000711212.1;transcript_id=HG00140_ch_T0000100;gene_id=HG00140_ch_G0000028;Parent=HG00140_ch_T0000100;transcript_name=HG00140_ch_T0000100;gene_name=SLC25A6;ID=exon:HG00140_ch_T0000100:3;Name=SLC25A6;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	1262369	1270273	.	+	.	source_gene_common_name=LINC00106;source_gene=ENSG00000292341.2;alternative_source_transcripts=ENST00000850831.1,ENST00000850831.1;gene_id=HG00140_ch_G0000029;gene_biotype=lncRNA;gene_name=LINC00106;gene_sources=liftoff;ID=HG00140_ch_G0000029;Name=LINC00106
HG00140_chrY	CAT	transcript	1262369	1270273	1000	+	.	source_transcript=ENST00000850831.1;source_transcript_name=LINC00106-208;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850831.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850831.1;transcript_score=296.977;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850831.1,ENST00000850831.1;transcript_id=HG00140_ch_T0000101;gene_id=HG00140_ch_G0000029;Parent=HG00140_ch_G0000029;transcript_name=HG00140_ch_T0000101;gene_name=LINC00106;ID=HG00140_ch_T0000101;Name=LINC00106
HG00140_chrY	CAT	exon	1262369	1262453	.	+	.	source_transcript=ENST00000850831.1;source_transcript_name=LINC00106-208;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850831.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850831.1;transcript_score=296.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850831.1,ENST00000850831.1;transcript_id=HG00140_ch_T0000101;gene_id=HG00140_ch_G0000029;Parent=HG00140_ch_T0000101;transcript_name=HG00140_ch_T0000101;gene_name=LINC00106;ID=exon:HG00140_ch_T0000101:0;Name=LINC00106;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1262454	1266126	.	+	.	source_transcript=ENST00000850831.1;source_transcript_name=LINC00106-208;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850831.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850831.1;transcript_score=296.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850831.1,ENST00000850831.1;transcript_id=HG00140_ch_T0000101;gene_id=HG00140_ch_G0000029;Parent=HG00140_ch_T0000101;transcript_name=HG00140_ch_T0000101;gene_name=LINC00106;ID=intron:HG00140_ch_T0000101:0;Name=LINC00106;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1266127	1266403	.	+	.	source_transcript=ENST00000850831.1;source_transcript_name=LINC00106-208;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850831.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850831.1;transcript_score=296.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850831.1,ENST00000850831.1;transcript_id=HG00140_ch_T0000101;gene_id=HG00140_ch_G0000029;Parent=HG00140_ch_T0000101;transcript_name=HG00140_ch_T0000101;gene_name=LINC00106;ID=exon:HG00140_ch_T0000101:1;Name=LINC00106;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1266404	1268582	.	+	.	source_transcript=ENST00000850831.1;source_transcript_name=LINC00106-208;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850831.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850831.1;transcript_score=296.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850831.1,ENST00000850831.1;transcript_id=HG00140_ch_T0000101;gene_id=HG00140_ch_G0000029;Parent=HG00140_ch_T0000101;transcript_name=HG00140_ch_T0000101;gene_name=LINC00106;ID=intron:HG00140_ch_T0000101:1;Name=LINC00106;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1268583	1268716	.	+	.	source_transcript=ENST00000850831.1;source_transcript_name=LINC00106-208;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850831.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850831.1;transcript_score=296.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850831.1,ENST00000850831.1;transcript_id=HG00140_ch_T0000101;gene_id=HG00140_ch_G0000029;Parent=HG00140_ch_T0000101;transcript_name=HG00140_ch_T0000101;gene_name=LINC00106;ID=exon:HG00140_ch_T0000101:2;Name=LINC00106;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1268717	1269917	.	+	.	source_transcript=ENST00000850831.1;source_transcript_name=LINC00106-208;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850831.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850831.1;transcript_score=296.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850831.1,ENST00000850831.1;transcript_id=HG00140_ch_T0000101;gene_id=HG00140_ch_G0000029;Parent=HG00140_ch_T0000101;transcript_name=HG00140_ch_T0000101;gene_name=LINC00106;ID=intron:HG00140_ch_T0000101:2;Name=LINC00106;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1269918	1270273	.	+	.	source_transcript=ENST00000850831.1;source_transcript_name=LINC00106-208;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850831.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850831.1;transcript_score=296.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850831.1,ENST00000850831.1;transcript_id=HG00140_ch_T0000101;gene_id=HG00140_ch_G0000029;Parent=HG00140_ch_T0000101;transcript_name=HG00140_ch_T0000101;gene_name=LINC00106;ID=exon:HG00140_ch_T0000101:3;Name=LINC00106;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1262419	1269170	1000	+	.	source_transcript=ENST00000850716.1;source_transcript_name=LINC00106-206;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850716.1;transcript_score=299.39;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850716.1,ENST00000850716.1;transcript_id=HG00140_ch_T0000102;gene_id=HG00140_ch_G0000029;Parent=HG00140_ch_G0000029;transcript_name=HG00140_ch_T0000102;gene_name=LINC00106;ID=HG00140_ch_T0000102;Name=LINC00106
HG00140_chrY	CAT	exon	1262419	1262453	.	+	.	source_transcript=ENST00000850716.1;source_transcript_name=LINC00106-206;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850716.1;transcript_score=299.39;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850716.1,ENST00000850716.1;transcript_id=HG00140_ch_T0000102;gene_id=HG00140_ch_G0000029;Parent=HG00140_ch_T0000102;transcript_name=HG00140_ch_T0000102;gene_name=LINC00106;ID=exon:HG00140_ch_T0000102:0;Name=LINC00106;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1262454	1266126	.	+	.	source_transcript=ENST00000850716.1;source_transcript_name=LINC00106-206;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850716.1;transcript_score=299.39;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850716.1,ENST00000850716.1;transcript_id=HG00140_ch_T0000102;gene_id=HG00140_ch_G0000029;Parent=HG00140_ch_T0000102;transcript_name=HG00140_ch_T0000102;gene_name=LINC00106;ID=intron:HG00140_ch_T0000102:0;Name=LINC00106;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1266127	1266403	.	+	.	source_transcript=ENST00000850716.1;source_transcript_name=LINC00106-206;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850716.1;transcript_score=299.39;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850716.1,ENST00000850716.1;transcript_id=HG00140_ch_T0000102;gene_id=HG00140_ch_G0000029;Parent=HG00140_ch_T0000102;transcript_name=HG00140_ch_T0000102;gene_name=LINC00106;ID=exon:HG00140_ch_T0000102:1;Name=LINC00106;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1266404	1268582	.	+	.	source_transcript=ENST00000850716.1;source_transcript_name=LINC00106-206;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850716.1;transcript_score=299.39;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850716.1,ENST00000850716.1;transcript_id=HG00140_ch_T0000102;gene_id=HG00140_ch_G0000029;Parent=HG00140_ch_T0000102;transcript_name=HG00140_ch_T0000102;gene_name=LINC00106;ID=intron:HG00140_ch_T0000102:1;Name=LINC00106;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1268583	1268716	.	+	.	source_transcript=ENST00000850716.1;source_transcript_name=LINC00106-206;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850716.1;transcript_score=299.39;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850716.1,ENST00000850716.1;transcript_id=HG00140_ch_T0000102;gene_id=HG00140_ch_G0000029;Parent=HG00140_ch_T0000102;transcript_name=HG00140_ch_T0000102;gene_name=LINC00106;ID=exon:HG00140_ch_T0000102:2;Name=LINC00106;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1268717	1269124	.	+	.	source_transcript=ENST00000850716.1;source_transcript_name=LINC00106-206;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850716.1;transcript_score=299.39;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850716.1,ENST00000850716.1;transcript_id=HG00140_ch_T0000102;gene_id=HG00140_ch_G0000029;Parent=HG00140_ch_T0000102;transcript_name=HG00140_ch_T0000102;gene_name=LINC00106;ID=intron:HG00140_ch_T0000102:2;Name=LINC00106;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1269125	1269170	.	+	.	source_transcript=ENST00000850716.1;source_transcript_name=LINC00106-206;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850716.1;transcript_score=299.39;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850716.1,ENST00000850716.1;transcript_id=HG00140_ch_T0000102;gene_id=HG00140_ch_G0000029;Parent=HG00140_ch_T0000102;transcript_name=HG00140_ch_T0000102;gene_name=LINC00106;ID=exon:HG00140_ch_T0000102:3;Name=LINC00106;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1266127	1270273	1000	+	.	source_transcript=ENST00000850717.1;source_transcript_name=LINC00106-207;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850717.1;transcript_score=296.632;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850717.1,ENST00000850717.1;transcript_id=HG00140_ch_T0000103;gene_id=HG00140_ch_G0000029;Parent=HG00140_ch_G0000029;transcript_name=HG00140_ch_T0000103;gene_name=LINC00106;ID=HG00140_ch_T0000103;Name=LINC00106
HG00140_chrY	CAT	exon	1266127	1266403	.	+	.	source_transcript=ENST00000850717.1;source_transcript_name=LINC00106-207;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850717.1;transcript_score=296.632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850717.1,ENST00000850717.1;transcript_id=HG00140_ch_T0000103;gene_id=HG00140_ch_G0000029;Parent=HG00140_ch_T0000103;transcript_name=HG00140_ch_T0000103;gene_name=LINC00106;ID=exon:HG00140_ch_T0000103:0;Name=LINC00106;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1266404	1268582	.	+	.	source_transcript=ENST00000850717.1;source_transcript_name=LINC00106-207;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850717.1;transcript_score=296.632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850717.1,ENST00000850717.1;transcript_id=HG00140_ch_T0000103;gene_id=HG00140_ch_G0000029;Parent=HG00140_ch_T0000103;transcript_name=HG00140_ch_T0000103;gene_name=LINC00106;ID=intron:HG00140_ch_T0000103:0;Name=LINC00106;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1268583	1268716	.	+	.	source_transcript=ENST00000850717.1;source_transcript_name=LINC00106-207;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850717.1;transcript_score=296.632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850717.1,ENST00000850717.1;transcript_id=HG00140_ch_T0000103;gene_id=HG00140_ch_G0000029;Parent=HG00140_ch_T0000103;transcript_name=HG00140_ch_T0000103;gene_name=LINC00106;ID=exon:HG00140_ch_T0000103:1;Name=LINC00106;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1268717	1269920	.	+	.	source_transcript=ENST00000850717.1;source_transcript_name=LINC00106-207;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850717.1;transcript_score=296.632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850717.1,ENST00000850717.1;transcript_id=HG00140_ch_T0000103;gene_id=HG00140_ch_G0000029;Parent=HG00140_ch_T0000103;transcript_name=HG00140_ch_T0000103;gene_name=LINC00106;ID=intron:HG00140_ch_T0000103:1;Name=LINC00106;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1269921	1270273	.	+	.	source_transcript=ENST00000850717.1;source_transcript_name=LINC00106-207;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850717.1;transcript_score=296.632;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000850717.1,ENST00000850717.1;transcript_id=HG00140_ch_T0000103;gene_id=HG00140_ch_G0000029;Parent=HG00140_ch_T0000103;transcript_name=HG00140_ch_T0000103;gene_name=LINC00106;ID=exon:HG00140_ch_T0000103:2;Name=LINC00106;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1266780	1269160	1000	+	.	source_transcript=ENST00000711188.1;source_transcript_name=LINC00106-205;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711188.1;transcript_score=298.649;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000711188.1,ENST00000711188.1;transcript_id=HG00140_ch_T0000104;gene_id=HG00140_ch_G0000029;Parent=HG00140_ch_G0000029;transcript_name=HG00140_ch_T0000104;gene_name=LINC00106;ID=HG00140_ch_T0000104;Name=LINC00106
HG00140_chrY	CAT	exon	1266780	1266979	.	+	.	source_transcript=ENST00000711188.1;source_transcript_name=LINC00106-205;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711188.1;transcript_score=298.649;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000711188.1,ENST00000711188.1;transcript_id=HG00140_ch_T0000104;gene_id=HG00140_ch_G0000029;Parent=HG00140_ch_T0000104;transcript_name=HG00140_ch_T0000104;gene_name=LINC00106;ID=exon:HG00140_ch_T0000104:0;Name=LINC00106;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1266980	1268582	.	+	.	source_transcript=ENST00000711188.1;source_transcript_name=LINC00106-205;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711188.1;transcript_score=298.649;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000711188.1,ENST00000711188.1;transcript_id=HG00140_ch_T0000104;gene_id=HG00140_ch_G0000029;Parent=HG00140_ch_T0000104;transcript_name=HG00140_ch_T0000104;gene_name=LINC00106;ID=intron:HG00140_ch_T0000104:0;Name=LINC00106;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1268583	1268716	.	+	.	source_transcript=ENST00000711188.1;source_transcript_name=LINC00106-205;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711188.1;transcript_score=298.649;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000711188.1,ENST00000711188.1;transcript_id=HG00140_ch_T0000104;gene_id=HG00140_ch_G0000029;Parent=HG00140_ch_T0000104;transcript_name=HG00140_ch_T0000104;gene_name=LINC00106;ID=exon:HG00140_ch_T0000104:1;Name=LINC00106;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1268717	1269124	.	+	.	source_transcript=ENST00000711188.1;source_transcript_name=LINC00106-205;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711188.1;transcript_score=298.649;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000711188.1,ENST00000711188.1;transcript_id=HG00140_ch_T0000104;gene_id=HG00140_ch_G0000029;Parent=HG00140_ch_T0000104;transcript_name=HG00140_ch_T0000104;gene_name=LINC00106;ID=intron:HG00140_ch_T0000104:1;Name=LINC00106;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1269125	1269160	.	+	.	source_transcript=ENST00000711188.1;source_transcript_name=LINC00106-205;source_gene=ENSG00000292341.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292341.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711188.1;transcript_score=298.649;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=ENST00000711188.1,ENST00000711188.1;transcript_id=HG00140_ch_T0000104;gene_id=HG00140_ch_G0000029;Parent=HG00140_ch_T0000104;transcript_name=HG00140_ch_T0000104;gene_name=LINC00106;ID=exon:HG00140_ch_T0000104:2;Name=LINC00106;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	1271180	1281689	.	+	.	source_gene_common_name=ASMTL-AS1;source_gene=ENSG00000292331.2;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;gene_id=HG00140_ch_G0000030;gene_biotype=lncRNA;gene_name=ASMTL-AS1;gene_sources=liftoff;ID=HG00140_ch_G0000030;Name=ASMTL-AS1
HG00140_chrY	CAT	transcript	1271180	1281689	1000	+	.	source_transcript=ENST00000850709.1;source_transcript_name=ASMTL-AS1-215;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850709.1;transcript_score=299.89;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;transcript_id=HG00140_ch_T0000105;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_G0000030;transcript_name=HG00140_ch_T0000105;gene_name=ASMTL-AS1;ID=HG00140_ch_T0000105;Name=ASMTL-AS1
HG00140_chrY	CAT	exon	1271180	1271336	.	+	.	source_transcript=ENST00000850709.1;source_transcript_name=ASMTL-AS1-215;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850709.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;transcript_id=HG00140_ch_T0000105;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000105;transcript_name=HG00140_ch_T0000105;gene_name=ASMTL-AS1;ID=exon:HG00140_ch_T0000105:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1271337	1271773	.	+	.	source_transcript=ENST00000850709.1;source_transcript_name=ASMTL-AS1-215;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850709.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;transcript_id=HG00140_ch_T0000105;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000105;transcript_name=HG00140_ch_T0000105;gene_name=ASMTL-AS1;ID=intron:HG00140_ch_T0000105:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1271774	1271975	.	+	.	source_transcript=ENST00000850709.1;source_transcript_name=ASMTL-AS1-215;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850709.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;transcript_id=HG00140_ch_T0000105;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000105;transcript_name=HG00140_ch_T0000105;gene_name=ASMTL-AS1;ID=exon:HG00140_ch_T0000105:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1271976	1273182	.	+	.	source_transcript=ENST00000850709.1;source_transcript_name=ASMTL-AS1-215;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850709.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;transcript_id=HG00140_ch_T0000105;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000105;transcript_name=HG00140_ch_T0000105;gene_name=ASMTL-AS1;ID=intron:HG00140_ch_T0000105:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1273183	1273307	.	+	.	source_transcript=ENST00000850709.1;source_transcript_name=ASMTL-AS1-215;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850709.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;transcript_id=HG00140_ch_T0000105;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000105;transcript_name=HG00140_ch_T0000105;gene_name=ASMTL-AS1;ID=exon:HG00140_ch_T0000105:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1273308	1280407	.	+	.	source_transcript=ENST00000850709.1;source_transcript_name=ASMTL-AS1-215;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850709.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;transcript_id=HG00140_ch_T0000105;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000105;transcript_name=HG00140_ch_T0000105;gene_name=ASMTL-AS1;ID=intron:HG00140_ch_T0000105:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1280408	1280553	.	+	.	source_transcript=ENST00000850709.1;source_transcript_name=ASMTL-AS1-215;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850709.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;transcript_id=HG00140_ch_T0000105;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000105;transcript_name=HG00140_ch_T0000105;gene_name=ASMTL-AS1;ID=exon:HG00140_ch_T0000105:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1280554	1281413	.	+	.	source_transcript=ENST00000850709.1;source_transcript_name=ASMTL-AS1-215;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850709.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;transcript_id=HG00140_ch_T0000105;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000105;transcript_name=HG00140_ch_T0000105;gene_name=ASMTL-AS1;ID=intron:HG00140_ch_T0000105:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1281414	1281689	.	+	.	source_transcript=ENST00000850709.1;source_transcript_name=ASMTL-AS1-215;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850709.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850709.1,ENST00000850709.1;transcript_id=HG00140_ch_T0000105;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000105;transcript_name=HG00140_ch_T0000105;gene_name=ASMTL-AS1;ID=exon:HG00140_ch_T0000105:4;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1271215	1281251	1000	+	.	source_transcript=ENST00000850711.1;source_transcript_name=ASMTL-AS1-217;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850711.1;transcript_score=299.896;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850711.1,ENST00000850711.1;transcript_id=HG00140_ch_T0000106;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_G0000030;transcript_name=HG00140_ch_T0000106;gene_name=ASMTL-AS1;ID=HG00140_ch_T0000106;Name=ASMTL-AS1
HG00140_chrY	CAT	exon	1271215	1271336	.	+	.	source_transcript=ENST00000850711.1;source_transcript_name=ASMTL-AS1-217;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850711.1;transcript_score=299.896;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850711.1,ENST00000850711.1;transcript_id=HG00140_ch_T0000106;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000106;transcript_name=HG00140_ch_T0000106;gene_name=ASMTL-AS1;ID=exon:HG00140_ch_T0000106:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1271337	1271773	.	+	.	source_transcript=ENST00000850711.1;source_transcript_name=ASMTL-AS1-217;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850711.1;transcript_score=299.896;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850711.1,ENST00000850711.1;transcript_id=HG00140_ch_T0000106;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000106;transcript_name=HG00140_ch_T0000106;gene_name=ASMTL-AS1;ID=intron:HG00140_ch_T0000106:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1271774	1271975	.	+	.	source_transcript=ENST00000850711.1;source_transcript_name=ASMTL-AS1-217;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850711.1;transcript_score=299.896;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850711.1,ENST00000850711.1;transcript_id=HG00140_ch_T0000106;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000106;transcript_name=HG00140_ch_T0000106;gene_name=ASMTL-AS1;ID=exon:HG00140_ch_T0000106:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1271976	1273182	.	+	.	source_transcript=ENST00000850711.1;source_transcript_name=ASMTL-AS1-217;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850711.1;transcript_score=299.896;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850711.1,ENST00000850711.1;transcript_id=HG00140_ch_T0000106;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000106;transcript_name=HG00140_ch_T0000106;gene_name=ASMTL-AS1;ID=intron:HG00140_ch_T0000106:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1273183	1273307	.	+	.	source_transcript=ENST00000850711.1;source_transcript_name=ASMTL-AS1-217;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850711.1;transcript_score=299.896;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850711.1,ENST00000850711.1;transcript_id=HG00140_ch_T0000106;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000106;transcript_name=HG00140_ch_T0000106;gene_name=ASMTL-AS1;ID=exon:HG00140_ch_T0000106:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1273308	1280407	.	+	.	source_transcript=ENST00000850711.1;source_transcript_name=ASMTL-AS1-217;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850711.1;transcript_score=299.896;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850711.1,ENST00000850711.1;transcript_id=HG00140_ch_T0000106;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000106;transcript_name=HG00140_ch_T0000106;gene_name=ASMTL-AS1;ID=intron:HG00140_ch_T0000106:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1280408	1280553	.	+	.	source_transcript=ENST00000850711.1;source_transcript_name=ASMTL-AS1-217;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850711.1;transcript_score=299.896;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850711.1,ENST00000850711.1;transcript_id=HG00140_ch_T0000106;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000106;transcript_name=HG00140_ch_T0000106;gene_name=ASMTL-AS1;ID=exon:HG00140_ch_T0000106:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1280554	1280888	.	+	.	source_transcript=ENST00000850711.1;source_transcript_name=ASMTL-AS1-217;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850711.1;transcript_score=299.896;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850711.1,ENST00000850711.1;transcript_id=HG00140_ch_T0000106;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000106;transcript_name=HG00140_ch_T0000106;gene_name=ASMTL-AS1;ID=intron:HG00140_ch_T0000106:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1280889	1281251	.	+	.	source_transcript=ENST00000850711.1;source_transcript_name=ASMTL-AS1-217;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850711.1;transcript_score=299.896;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850711.1,ENST00000850711.1;transcript_id=HG00140_ch_T0000106;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000106;transcript_name=HG00140_ch_T0000106;gene_name=ASMTL-AS1;ID=exon:HG00140_ch_T0000106:4;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1271215	1280820	1000	+	.	source_transcript=ENST00000850825.1;source_transcript_name=ASMTL-AS1-220;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850825.1;transcript_score=299.884;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850825.1,ENST00000850825.1;transcript_id=HG00140_ch_T0000107;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_G0000030;transcript_name=HG00140_ch_T0000107;gene_name=ASMTL-AS1;ID=HG00140_ch_T0000107;Name=ASMTL-AS1
HG00140_chrY	CAT	exon	1271215	1271336	.	+	.	source_transcript=ENST00000850825.1;source_transcript_name=ASMTL-AS1-220;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850825.1;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850825.1,ENST00000850825.1;transcript_id=HG00140_ch_T0000107;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000107;transcript_name=HG00140_ch_T0000107;gene_name=ASMTL-AS1;ID=exon:HG00140_ch_T0000107:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1271337	1271773	.	+	.	source_transcript=ENST00000850825.1;source_transcript_name=ASMTL-AS1-220;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850825.1;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850825.1,ENST00000850825.1;transcript_id=HG00140_ch_T0000107;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000107;transcript_name=HG00140_ch_T0000107;gene_name=ASMTL-AS1;ID=intron:HG00140_ch_T0000107:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1271774	1271975	.	+	.	source_transcript=ENST00000850825.1;source_transcript_name=ASMTL-AS1-220;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850825.1;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850825.1,ENST00000850825.1;transcript_id=HG00140_ch_T0000107;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000107;transcript_name=HG00140_ch_T0000107;gene_name=ASMTL-AS1;ID=exon:HG00140_ch_T0000107:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1271976	1273182	.	+	.	source_transcript=ENST00000850825.1;source_transcript_name=ASMTL-AS1-220;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850825.1;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850825.1,ENST00000850825.1;transcript_id=HG00140_ch_T0000107;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000107;transcript_name=HG00140_ch_T0000107;gene_name=ASMTL-AS1;ID=intron:HG00140_ch_T0000107:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1273183	1273307	.	+	.	source_transcript=ENST00000850825.1;source_transcript_name=ASMTL-AS1-220;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850825.1;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850825.1,ENST00000850825.1;transcript_id=HG00140_ch_T0000107;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000107;transcript_name=HG00140_ch_T0000107;gene_name=ASMTL-AS1;ID=exon:HG00140_ch_T0000107:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1273308	1280407	.	+	.	source_transcript=ENST00000850825.1;source_transcript_name=ASMTL-AS1-220;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850825.1;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850825.1,ENST00000850825.1;transcript_id=HG00140_ch_T0000107;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000107;transcript_name=HG00140_ch_T0000107;gene_name=ASMTL-AS1;ID=intron:HG00140_ch_T0000107:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1280408	1280820	.	+	.	source_transcript=ENST00000850825.1;source_transcript_name=ASMTL-AS1-220;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850825.1;transcript_score=299.884;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850825.1,ENST00000850825.1;transcript_id=HG00140_ch_T0000107;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000107;transcript_name=HG00140_ch_T0000107;gene_name=ASMTL-AS1;ID=exon:HG00140_ch_T0000107:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1271225	1281689	1000	+	.	source_transcript=ENST00000850710.1;source_transcript_name=ASMTL-AS1-216;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850710.1;transcript_score=299.882;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850710.1,ENST00000850710.1;transcript_id=HG00140_ch_T0000108;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_G0000030;transcript_name=HG00140_ch_T0000108;gene_name=ASMTL-AS1;ID=HG00140_ch_T0000108;Name=ASMTL-AS1
HG00140_chrY	CAT	exon	1271225	1271336	.	+	.	source_transcript=ENST00000850710.1;source_transcript_name=ASMTL-AS1-216;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850710.1;transcript_score=299.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850710.1,ENST00000850710.1;transcript_id=HG00140_ch_T0000108;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000108;transcript_name=HG00140_ch_T0000108;gene_name=ASMTL-AS1;ID=exon:HG00140_ch_T0000108:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1271337	1271773	.	+	.	source_transcript=ENST00000850710.1;source_transcript_name=ASMTL-AS1-216;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850710.1;transcript_score=299.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850710.1,ENST00000850710.1;transcript_id=HG00140_ch_T0000108;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000108;transcript_name=HG00140_ch_T0000108;gene_name=ASMTL-AS1;ID=intron:HG00140_ch_T0000108:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1271774	1271975	.	+	.	source_transcript=ENST00000850710.1;source_transcript_name=ASMTL-AS1-216;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850710.1;transcript_score=299.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850710.1,ENST00000850710.1;transcript_id=HG00140_ch_T0000108;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000108;transcript_name=HG00140_ch_T0000108;gene_name=ASMTL-AS1;ID=exon:HG00140_ch_T0000108:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1271976	1273182	.	+	.	source_transcript=ENST00000850710.1;source_transcript_name=ASMTL-AS1-216;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850710.1;transcript_score=299.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850710.1,ENST00000850710.1;transcript_id=HG00140_ch_T0000108;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000108;transcript_name=HG00140_ch_T0000108;gene_name=ASMTL-AS1;ID=intron:HG00140_ch_T0000108:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1273183	1273307	.	+	.	source_transcript=ENST00000850710.1;source_transcript_name=ASMTL-AS1-216;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850710.1;transcript_score=299.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850710.1,ENST00000850710.1;transcript_id=HG00140_ch_T0000108;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000108;transcript_name=HG00140_ch_T0000108;gene_name=ASMTL-AS1;ID=exon:HG00140_ch_T0000108:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1273308	1280407	.	+	.	source_transcript=ENST00000850710.1;source_transcript_name=ASMTL-AS1-216;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850710.1;transcript_score=299.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850710.1,ENST00000850710.1;transcript_id=HG00140_ch_T0000108;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000108;transcript_name=HG00140_ch_T0000108;gene_name=ASMTL-AS1;ID=intron:HG00140_ch_T0000108:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1280408	1280553	.	+	.	source_transcript=ENST00000850710.1;source_transcript_name=ASMTL-AS1-216;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850710.1;transcript_score=299.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850710.1,ENST00000850710.1;transcript_id=HG00140_ch_T0000108;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000108;transcript_name=HG00140_ch_T0000108;gene_name=ASMTL-AS1;ID=exon:HG00140_ch_T0000108:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1280554	1281426	.	+	.	source_transcript=ENST00000850710.1;source_transcript_name=ASMTL-AS1-216;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850710.1;transcript_score=299.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850710.1,ENST00000850710.1;transcript_id=HG00140_ch_T0000108;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000108;transcript_name=HG00140_ch_T0000108;gene_name=ASMTL-AS1;ID=intron:HG00140_ch_T0000108:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1281427	1281689	.	+	.	source_transcript=ENST00000850710.1;source_transcript_name=ASMTL-AS1-216;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850710.1;transcript_score=299.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850710.1,ENST00000850710.1;transcript_id=HG00140_ch_T0000108;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000108;transcript_name=HG00140_ch_T0000108;gene_name=ASMTL-AS1;ID=exon:HG00140_ch_T0000108:4;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1271519	1273215	1000	+	.	source_transcript=ENST00000711119.1;source_transcript_name=ASMTL-AS1-213;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711119.1;transcript_score=299.826;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711119.1,ENST00000711119.1;transcript_id=HG00140_ch_T0000109;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_G0000030;transcript_name=HG00140_ch_T0000109;gene_name=ASMTL-AS1;ID=HG00140_ch_T0000109;Name=ASMTL-AS1
HG00140_chrY	CAT	exon	1271519	1271975	.	+	.	source_transcript=ENST00000711119.1;source_transcript_name=ASMTL-AS1-213;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711119.1;transcript_score=299.826;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711119.1,ENST00000711119.1;transcript_id=HG00140_ch_T0000109;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000109;transcript_name=HG00140_ch_T0000109;gene_name=ASMTL-AS1;ID=exon:HG00140_ch_T0000109:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1271976	1273098	.	+	.	source_transcript=ENST00000711119.1;source_transcript_name=ASMTL-AS1-213;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711119.1;transcript_score=299.826;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711119.1,ENST00000711119.1;transcript_id=HG00140_ch_T0000109;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000109;transcript_name=HG00140_ch_T0000109;gene_name=ASMTL-AS1;ID=intron:HG00140_ch_T0000109:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1273099	1273215	.	+	.	source_transcript=ENST00000711119.1;source_transcript_name=ASMTL-AS1-213;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711119.1;transcript_score=299.826;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711119.1,ENST00000711119.1;transcript_id=HG00140_ch_T0000109;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000109;transcript_name=HG00140_ch_T0000109;gene_name=ASMTL-AS1;ID=exon:HG00140_ch_T0000109:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1271561	1281580	1000	+	.	source_transcript=ENST00000711134.1;source_transcript_name=ASMTL-AS1-214;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711134.1;transcript_score=299.881;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711134.1,ENST00000711134.1;transcript_id=HG00140_ch_T0000110;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_G0000030;transcript_name=HG00140_ch_T0000110;gene_name=ASMTL-AS1;ID=HG00140_ch_T0000110;Name=ASMTL-AS1
HG00140_chrY	CAT	exon	1271561	1271975	.	+	.	source_transcript=ENST00000711134.1;source_transcript_name=ASMTL-AS1-214;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711134.1;transcript_score=299.881;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711134.1,ENST00000711134.1;transcript_id=HG00140_ch_T0000110;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000110;transcript_name=HG00140_ch_T0000110;gene_name=ASMTL-AS1;ID=exon:HG00140_ch_T0000110:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1271976	1273182	.	+	.	source_transcript=ENST00000711134.1;source_transcript_name=ASMTL-AS1-214;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711134.1;transcript_score=299.881;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711134.1,ENST00000711134.1;transcript_id=HG00140_ch_T0000110;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000110;transcript_name=HG00140_ch_T0000110;gene_name=ASMTL-AS1;ID=intron:HG00140_ch_T0000110:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1273183	1273307	.	+	.	source_transcript=ENST00000711134.1;source_transcript_name=ASMTL-AS1-214;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711134.1;transcript_score=299.881;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711134.1,ENST00000711134.1;transcript_id=HG00140_ch_T0000110;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000110;transcript_name=HG00140_ch_T0000110;gene_name=ASMTL-AS1;ID=exon:HG00140_ch_T0000110:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1273308	1280407	.	+	.	source_transcript=ENST00000711134.1;source_transcript_name=ASMTL-AS1-214;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711134.1;transcript_score=299.881;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711134.1,ENST00000711134.1;transcript_id=HG00140_ch_T0000110;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000110;transcript_name=HG00140_ch_T0000110;gene_name=ASMTL-AS1;ID=intron:HG00140_ch_T0000110:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1280408	1280553	.	+	.	source_transcript=ENST00000711134.1;source_transcript_name=ASMTL-AS1-214;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711134.1;transcript_score=299.881;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711134.1,ENST00000711134.1;transcript_id=HG00140_ch_T0000110;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000110;transcript_name=HG00140_ch_T0000110;gene_name=ASMTL-AS1;ID=exon:HG00140_ch_T0000110:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1280554	1281426	.	+	.	source_transcript=ENST00000711134.1;source_transcript_name=ASMTL-AS1-214;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711134.1;transcript_score=299.881;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711134.1,ENST00000711134.1;transcript_id=HG00140_ch_T0000110;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000110;transcript_name=HG00140_ch_T0000110;gene_name=ASMTL-AS1;ID=intron:HG00140_ch_T0000110:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1281427	1281580	.	+	.	source_transcript=ENST00000711134.1;source_transcript_name=ASMTL-AS1-214;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711134.1;transcript_score=299.881;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711134.1,ENST00000711134.1;transcript_id=HG00140_ch_T0000110;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000110;transcript_name=HG00140_ch_T0000110;gene_name=ASMTL-AS1;ID=exon:HG00140_ch_T0000110:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1271726	1281251	1000	+	.	source_transcript=ENST00000850712.1;source_transcript_name=ASMTL-AS1-218;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850712.1;transcript_score=299.918;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850712.1,ENST00000850712.1;transcript_id=HG00140_ch_T0000111;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_G0000030;transcript_name=HG00140_ch_T0000111;gene_name=ASMTL-AS1;ID=HG00140_ch_T0000111;Name=ASMTL-AS1
HG00140_chrY	CAT	exon	1271726	1271975	.	+	.	source_transcript=ENST00000850712.1;source_transcript_name=ASMTL-AS1-218;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850712.1;transcript_score=299.918;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850712.1,ENST00000850712.1;transcript_id=HG00140_ch_T0000111;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000111;transcript_name=HG00140_ch_T0000111;gene_name=ASMTL-AS1;ID=exon:HG00140_ch_T0000111:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1271976	1273182	.	+	.	source_transcript=ENST00000850712.1;source_transcript_name=ASMTL-AS1-218;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850712.1;transcript_score=299.918;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850712.1,ENST00000850712.1;transcript_id=HG00140_ch_T0000111;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000111;transcript_name=HG00140_ch_T0000111;gene_name=ASMTL-AS1;ID=intron:HG00140_ch_T0000111:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1273183	1273307	.	+	.	source_transcript=ENST00000850712.1;source_transcript_name=ASMTL-AS1-218;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850712.1;transcript_score=299.918;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850712.1,ENST00000850712.1;transcript_id=HG00140_ch_T0000111;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000111;transcript_name=HG00140_ch_T0000111;gene_name=ASMTL-AS1;ID=exon:HG00140_ch_T0000111:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1273308	1280407	.	+	.	source_transcript=ENST00000850712.1;source_transcript_name=ASMTL-AS1-218;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850712.1;transcript_score=299.918;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850712.1,ENST00000850712.1;transcript_id=HG00140_ch_T0000111;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000111;transcript_name=HG00140_ch_T0000111;gene_name=ASMTL-AS1;ID=intron:HG00140_ch_T0000111:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1280408	1281251	.	+	.	source_transcript=ENST00000850712.1;source_transcript_name=ASMTL-AS1-218;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850712.1;transcript_score=299.918;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850712.1,ENST00000850712.1;transcript_id=HG00140_ch_T0000111;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000111;transcript_name=HG00140_ch_T0000111;gene_name=ASMTL-AS1;ID=exon:HG00140_ch_T0000111:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1272904	1281251	1000	+	.	source_transcript=ENST00000850713.1;source_transcript_name=ASMTL-AS1-219;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850713.1;transcript_score=299.84000000000003;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850713.1,ENST00000850713.1;transcript_id=HG00140_ch_T0000118;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_G0000030;transcript_name=HG00140_ch_T0000118;gene_name=ASMTL-AS1;ID=HG00140_ch_T0000118;Name=ASMTL-AS1
HG00140_chrY	CAT	exon	1272904	1273307	.	+	.	source_transcript=ENST00000850713.1;source_transcript_name=ASMTL-AS1-219;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850713.1;transcript_score=299.84000000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850713.1,ENST00000850713.1;transcript_id=HG00140_ch_T0000118;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000118;transcript_name=HG00140_ch_T0000118;gene_name=ASMTL-AS1;ID=exon:HG00140_ch_T0000118:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1273308	1280407	.	+	.	source_transcript=ENST00000850713.1;source_transcript_name=ASMTL-AS1-219;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850713.1;transcript_score=299.84000000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850713.1,ENST00000850713.1;transcript_id=HG00140_ch_T0000118;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000118;transcript_name=HG00140_ch_T0000118;gene_name=ASMTL-AS1;ID=intron:HG00140_ch_T0000118:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1280408	1281251	.	+	.	source_transcript=ENST00000850713.1;source_transcript_name=ASMTL-AS1-219;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850713.1;transcript_score=299.84000000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000850713.1,ENST00000850713.1;transcript_id=HG00140_ch_T0000118;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000118;transcript_name=HG00140_ch_T0000118;gene_name=ASMTL-AS1;ID=exon:HG00140_ch_T0000118:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1273181	1281693	1000	+	.	source_transcript=ENST00000711117.1;source_transcript_name=ASMTL-AS1-212;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711117.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711117.1,ENST00000711117.1;transcript_id=HG00140_ch_T0000119;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_G0000030;transcript_name=HG00140_ch_T0000119;gene_name=ASMTL-AS1;ID=HG00140_ch_T0000119;Name=ASMTL-AS1
HG00140_chrY	CAT	exon	1273181	1273307	.	+	.	source_transcript=ENST00000711117.1;source_transcript_name=ASMTL-AS1-212;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711117.1,ENST00000711117.1;transcript_id=HG00140_ch_T0000119;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000119;transcript_name=HG00140_ch_T0000119;gene_name=ASMTL-AS1;ID=exon:HG00140_ch_T0000119:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1273308	1280407	.	+	.	source_transcript=ENST00000711117.1;source_transcript_name=ASMTL-AS1-212;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711117.1,ENST00000711117.1;transcript_id=HG00140_ch_T0000119;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000119;transcript_name=HG00140_ch_T0000119;gene_name=ASMTL-AS1;ID=intron:HG00140_ch_T0000119:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1280408	1280553	.	+	.	source_transcript=ENST00000711117.1;source_transcript_name=ASMTL-AS1-212;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711117.1,ENST00000711117.1;transcript_id=HG00140_ch_T0000119;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000119;transcript_name=HG00140_ch_T0000119;gene_name=ASMTL-AS1;ID=exon:HG00140_ch_T0000119:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1280554	1281413	.	+	.	source_transcript=ENST00000711117.1;source_transcript_name=ASMTL-AS1-212;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711117.1,ENST00000711117.1;transcript_id=HG00140_ch_T0000119;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000119;transcript_name=HG00140_ch_T0000119;gene_name=ASMTL-AS1;ID=intron:HG00140_ch_T0000119:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1281414	1281693	.	+	.	source_transcript=ENST00000711117.1;source_transcript_name=ASMTL-AS1-212;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711117.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711117.1,ENST00000711117.1;transcript_id=HG00140_ch_T0000119;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000119;transcript_name=HG00140_ch_T0000119;gene_name=ASMTL-AS1;ID=exon:HG00140_ch_T0000119:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1273232	1281689	1000	+	.	source_transcript=ENST00000711116.1;source_transcript_name=ASMTL-AS1-211;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711116.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711116.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711116.1,ENST00000711116.1;transcript_id=HG00140_ch_T0000120;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_G0000030;transcript_name=HG00140_ch_T0000120;gene_name=ASMTL-AS1;ID=HG00140_ch_T0000120;Name=ASMTL-AS1
HG00140_chrY	CAT	exon	1273232	1273307	.	+	.	source_transcript=ENST00000711116.1;source_transcript_name=ASMTL-AS1-211;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711116.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711116.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711116.1,ENST00000711116.1;transcript_id=HG00140_ch_T0000120;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000120;transcript_name=HG00140_ch_T0000120;gene_name=ASMTL-AS1;ID=exon:HG00140_ch_T0000120:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1273308	1280455	.	+	.	source_transcript=ENST00000711116.1;source_transcript_name=ASMTL-AS1-211;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711116.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711116.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711116.1,ENST00000711116.1;transcript_id=HG00140_ch_T0000120;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000120;transcript_name=HG00140_ch_T0000120;gene_name=ASMTL-AS1;ID=intron:HG00140_ch_T0000120:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1280456	1280553	.	+	.	source_transcript=ENST00000711116.1;source_transcript_name=ASMTL-AS1-211;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711116.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711116.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711116.1,ENST00000711116.1;transcript_id=HG00140_ch_T0000120;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000120;transcript_name=HG00140_ch_T0000120;gene_name=ASMTL-AS1;ID=exon:HG00140_ch_T0000120:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1280554	1281428	.	+	.	source_transcript=ENST00000711116.1;source_transcript_name=ASMTL-AS1-211;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711116.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711116.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711116.1,ENST00000711116.1;transcript_id=HG00140_ch_T0000120;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000120;transcript_name=HG00140_ch_T0000120;gene_name=ASMTL-AS1;ID=intron:HG00140_ch_T0000120:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1281429	1281689	.	+	.	source_transcript=ENST00000711116.1;source_transcript_name=ASMTL-AS1-211;source_gene=ENSG00000292331.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292331.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711116.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711116.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=ENST00000711116.1,ENST00000711116.1;transcript_id=HG00140_ch_T0000120;gene_id=HG00140_ch_G0000030;Parent=HG00140_ch_T0000120;transcript_name=HG00140_ch_T0000120;gene_name=ASMTL-AS1;ID=exon:HG00140_ch_T0000120:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	1272862	1321806	.	-	.	source_gene_common_name=ASMTL;source_gene=ENSG00000292339.1;alternative_source_transcripts=ENST00000711192.1;gene_id=HG00140_ch_G0000031;gene_biotype=protein_coding;gene_name=ASMTL;gene_sources=liftoff,transMap;ID=HG00140_ch_G0000031;Name=ASMTL
HG00140_chrY	CAT	transcript	1272862	1321798	9960	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=199.882;frameshift=True;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711192.1;transcript_id=HG00140_ch_T0000112;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_G0000031;transcript_name=HG00140_ch_T0000112;gene_name=ASMTL;ID=HG00140_ch_T0000112;Name=ASMTL
HG00140_chrY	CAT	exon	1272862	1272993	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=199.882;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711192.1;transcript_id=HG00140_ch_T0000112;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000112;transcript_name=HG00140_ch_T0000112;gene_name=ASMTL;ID=exon:HG00140_ch_T0000112:0;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1272992	1272993	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=199.882;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711192.1;transcript_id=HG00140_ch_T0000112;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000112;transcript_name=HG00140_ch_T0000112;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000112:0;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1272994	1273211	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=199.882;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711192.1;transcript_id=HG00140_ch_T0000112;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000112;transcript_name=HG00140_ch_T0000112;gene_name=ASMTL;ID=exon:HG00140_ch_T0000112:1;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1272994	1273211	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=199.882;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711192.1;transcript_id=HG00140_ch_T0000112;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000112;transcript_name=HG00140_ch_T0000112;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000112:1;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1273212	1280396	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=199.882;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711192.1;transcript_id=HG00140_ch_T0000112;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000112;transcript_name=HG00140_ch_T0000112;gene_name=ASMTL;ID=intron:HG00140_ch_T0000112:1;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1280397	1280519	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=199.882;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711192.1;transcript_id=HG00140_ch_T0000112;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000112;transcript_name=HG00140_ch_T0000112;gene_name=ASMTL;ID=exon:HG00140_ch_T0000112:2;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1280397	1280519	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=199.882;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711192.1;transcript_id=HG00140_ch_T0000112;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000112;transcript_name=HG00140_ch_T0000112;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000112:2;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1280520	1285652	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=199.882;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711192.1;transcript_id=HG00140_ch_T0000112;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000112;transcript_name=HG00140_ch_T0000112;gene_name=ASMTL;ID=intron:HG00140_ch_T0000112:2;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1285653	1285796	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=199.882;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711192.1;transcript_id=HG00140_ch_T0000112;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000112;transcript_name=HG00140_ch_T0000112;gene_name=ASMTL;ID=exon:HG00140_ch_T0000112:3;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1285653	1285796	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=199.882;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711192.1;transcript_id=HG00140_ch_T0000112;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000112;transcript_name=HG00140_ch_T0000112;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000112:3;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1285797	1286661	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=199.882;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711192.1;transcript_id=HG00140_ch_T0000112;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000112;transcript_name=HG00140_ch_T0000112;gene_name=ASMTL;ID=intron:HG00140_ch_T0000112:3;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1286662	1286794	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=199.882;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711192.1;transcript_id=HG00140_ch_T0000112;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000112;transcript_name=HG00140_ch_T0000112;gene_name=ASMTL;ID=exon:HG00140_ch_T0000112:4;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1286662	1286794	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=199.882;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711192.1;transcript_id=HG00140_ch_T0000112;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000112;transcript_name=HG00140_ch_T0000112;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000112:4;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1286795	1289336	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=199.882;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711192.1;transcript_id=HG00140_ch_T0000112;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000112;transcript_name=HG00140_ch_T0000112;gene_name=ASMTL;ID=intron:HG00140_ch_T0000112:4;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1289337	1289521	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=199.882;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711192.1;transcript_id=HG00140_ch_T0000112;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000112;transcript_name=HG00140_ch_T0000112;gene_name=ASMTL;ID=exon:HG00140_ch_T0000112:5;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1289337	1289521	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=199.882;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711192.1;transcript_id=HG00140_ch_T0000112;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000112;transcript_name=HG00140_ch_T0000112;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000112:5;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1289522	1293199	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=199.882;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711192.1;transcript_id=HG00140_ch_T0000112;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000112;transcript_name=HG00140_ch_T0000112;gene_name=ASMTL;ID=intron:HG00140_ch_T0000112:5;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1293200	1293362	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=199.882;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711192.1;transcript_id=HG00140_ch_T0000112;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000112;transcript_name=HG00140_ch_T0000112;gene_name=ASMTL;ID=exon:HG00140_ch_T0000112:6;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1293200	1293362	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=199.882;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711192.1;transcript_id=HG00140_ch_T0000112;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000112;transcript_name=HG00140_ch_T0000112;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000112:6;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1293363	1295408	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=199.882;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711192.1;transcript_id=HG00140_ch_T0000112;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000112;transcript_name=HG00140_ch_T0000112;gene_name=ASMTL;ID=intron:HG00140_ch_T0000112:6;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1295409	1295796	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=199.882;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711192.1;transcript_id=HG00140_ch_T0000112;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000112;transcript_name=HG00140_ch_T0000112;gene_name=ASMTL;ID=exon:HG00140_ch_T0000112:7;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1295409	1295796	.	-	1	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=199.882;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711192.1;transcript_id=HG00140_ch_T0000112;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000112;transcript_name=HG00140_ch_T0000112;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000112:7;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1295797	1299963	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=199.882;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711192.1;transcript_id=HG00140_ch_T0000112;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000112;transcript_name=HG00140_ch_T0000112;gene_name=ASMTL;ID=intron:HG00140_ch_T0000112:7;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1299964	1300072	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=199.882;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711192.1;transcript_id=HG00140_ch_T0000112;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000112;transcript_name=HG00140_ch_T0000112;gene_name=ASMTL;ID=exon:HG00140_ch_T0000112:8;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1299964	1300072	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=199.882;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711192.1;transcript_id=HG00140_ch_T0000112;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000112;transcript_name=HG00140_ch_T0000112;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000112:8;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1300073	1303253	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=199.882;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711192.1;transcript_id=HG00140_ch_T0000112;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000112;transcript_name=HG00140_ch_T0000112;gene_name=ASMTL;ID=intron:HG00140_ch_T0000112:8;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1303254	1303315	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=199.882;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711192.1;transcript_id=HG00140_ch_T0000112;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000112;transcript_name=HG00140_ch_T0000112;gene_name=ASMTL;ID=exon:HG00140_ch_T0000112:9;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1303254	1303315	.	-	1	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=199.882;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711192.1;transcript_id=HG00140_ch_T0000112;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000112;transcript_name=HG00140_ch_T0000112;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000112:9;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1303316	1303925	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=199.882;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711192.1;transcript_id=HG00140_ch_T0000112;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000112;transcript_name=HG00140_ch_T0000112;gene_name=ASMTL;ID=intron:HG00140_ch_T0000112:9;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1303926	1303990	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=199.882;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711192.1;transcript_id=HG00140_ch_T0000112;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000112;transcript_name=HG00140_ch_T0000112;gene_name=ASMTL;ID=exon:HG00140_ch_T0000112:10;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1303926	1303990	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=199.882;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711192.1;transcript_id=HG00140_ch_T0000112;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000112;transcript_name=HG00140_ch_T0000112;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000112:10;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1303991	1307328	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=199.882;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711192.1;transcript_id=HG00140_ch_T0000112;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000112;transcript_name=HG00140_ch_T0000112;gene_name=ASMTL;ID=intron:HG00140_ch_T0000112:10;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1307329	1307376	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=199.882;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711192.1;transcript_id=HG00140_ch_T0000112;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000112;transcript_name=HG00140_ch_T0000112;gene_name=ASMTL;ID=exon:HG00140_ch_T0000112:11;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1307329	1307376	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=199.882;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711192.1;transcript_id=HG00140_ch_T0000112;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000112;transcript_name=HG00140_ch_T0000112;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000112:11;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1307377	1310417	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=199.882;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711192.1;transcript_id=HG00140_ch_T0000112;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000112;transcript_name=HG00140_ch_T0000112;gene_name=ASMTL;ID=intron:HG00140_ch_T0000112:11;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1310418	1310549	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=199.882;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711192.1;transcript_id=HG00140_ch_T0000112;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000112;transcript_name=HG00140_ch_T0000112;gene_name=ASMTL;ID=exon:HG00140_ch_T0000112:12;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1310418	1310468	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=199.882;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711192.1;transcript_id=HG00140_ch_T0000112;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000112;transcript_name=HG00140_ch_T0000112;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000112:12;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	1310466	1310468	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=199.882;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711192.1;transcript_id=HG00140_ch_T0000112;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000112;transcript_name=HG00140_ch_T0000112;gene_name=ASMTL;ID=start_codon:HG00140_ch_T0000112;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1310550	1321661	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=199.882;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711192.1;transcript_id=HG00140_ch_T0000112;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000112;transcript_name=HG00140_ch_T0000112;gene_name=ASMTL;ID=intron:HG00140_ch_T0000112:12;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1321662	1321798	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711192.1;transcript_score=199.882;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711192.1;transcript_id=HG00140_ch_T0000112;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000112;transcript_name=HG00140_ch_T0000112;gene_name=ASMTL;ID=exon:HG00140_ch_T0000112:13;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1272862	1320952	9980	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711197.1;transcript_score=299.892;frameshift=True;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1;transcript_id=HG00140_ch_T0000113;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_G0000031;transcript_name=HG00140_ch_T0000113;gene_name=ASMTL;ID=HG00140_ch_T0000113;Name=ASMTL
HG00140_chrY	CAT	exon	1272862	1272993	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711197.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1;transcript_id=HG00140_ch_T0000113;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000113;transcript_name=HG00140_ch_T0000113;gene_name=ASMTL;ID=exon:HG00140_ch_T0000113:0;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1272992	1272993	.	-	2	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711197.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1;transcript_id=HG00140_ch_T0000113;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000113;transcript_name=HG00140_ch_T0000113;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000113:0;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1272994	1273211	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711197.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1;transcript_id=HG00140_ch_T0000113;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000113;transcript_name=HG00140_ch_T0000113;gene_name=ASMTL;ID=exon:HG00140_ch_T0000113:1;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1272994	1273211	.	-	2	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711197.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1;transcript_id=HG00140_ch_T0000113;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000113;transcript_name=HG00140_ch_T0000113;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000113:1;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1273212	1280396	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711197.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1;transcript_id=HG00140_ch_T0000113;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000113;transcript_name=HG00140_ch_T0000113;gene_name=ASMTL;ID=intron:HG00140_ch_T0000113:1;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1280397	1280519	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711197.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1;transcript_id=HG00140_ch_T0000113;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000113;transcript_name=HG00140_ch_T0000113;gene_name=ASMTL;ID=exon:HG00140_ch_T0000113:2;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1280397	1280519	.	-	2	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711197.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1;transcript_id=HG00140_ch_T0000113;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000113;transcript_name=HG00140_ch_T0000113;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000113:2;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1280520	1285652	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711197.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1;transcript_id=HG00140_ch_T0000113;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000113;transcript_name=HG00140_ch_T0000113;gene_name=ASMTL;ID=intron:HG00140_ch_T0000113:2;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1285653	1285796	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711197.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1;transcript_id=HG00140_ch_T0000113;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000113;transcript_name=HG00140_ch_T0000113;gene_name=ASMTL;ID=exon:HG00140_ch_T0000113:3;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1285653	1285796	.	-	2	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711197.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1;transcript_id=HG00140_ch_T0000113;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000113;transcript_name=HG00140_ch_T0000113;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000113:3;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1285797	1286661	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711197.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1;transcript_id=HG00140_ch_T0000113;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000113;transcript_name=HG00140_ch_T0000113;gene_name=ASMTL;ID=intron:HG00140_ch_T0000113:3;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1286662	1286794	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711197.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1;transcript_id=HG00140_ch_T0000113;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000113;transcript_name=HG00140_ch_T0000113;gene_name=ASMTL;ID=exon:HG00140_ch_T0000113:4;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1286662	1286794	.	-	0	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711197.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1;transcript_id=HG00140_ch_T0000113;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000113;transcript_name=HG00140_ch_T0000113;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000113:4;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1286795	1289336	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711197.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1;transcript_id=HG00140_ch_T0000113;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000113;transcript_name=HG00140_ch_T0000113;gene_name=ASMTL;ID=intron:HG00140_ch_T0000113:4;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1289337	1289521	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711197.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1;transcript_id=HG00140_ch_T0000113;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000113;transcript_name=HG00140_ch_T0000113;gene_name=ASMTL;ID=exon:HG00140_ch_T0000113:5;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1289337	1289521	.	-	2	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711197.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1;transcript_id=HG00140_ch_T0000113;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000113;transcript_name=HG00140_ch_T0000113;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000113:5;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1289522	1293199	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711197.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1;transcript_id=HG00140_ch_T0000113;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000113;transcript_name=HG00140_ch_T0000113;gene_name=ASMTL;ID=intron:HG00140_ch_T0000113:5;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1293200	1293362	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711197.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1;transcript_id=HG00140_ch_T0000113;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000113;transcript_name=HG00140_ch_T0000113;gene_name=ASMTL;ID=exon:HG00140_ch_T0000113:6;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1293200	1293362	.	-	0	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711197.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1;transcript_id=HG00140_ch_T0000113;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000113;transcript_name=HG00140_ch_T0000113;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000113:6;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1293363	1295408	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711197.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1;transcript_id=HG00140_ch_T0000113;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000113;transcript_name=HG00140_ch_T0000113;gene_name=ASMTL;ID=intron:HG00140_ch_T0000113:6;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1295409	1295796	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711197.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1;transcript_id=HG00140_ch_T0000113;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000113;transcript_name=HG00140_ch_T0000113;gene_name=ASMTL;ID=exon:HG00140_ch_T0000113:7;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1295409	1295796	.	-	1	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711197.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1;transcript_id=HG00140_ch_T0000113;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000113;transcript_name=HG00140_ch_T0000113;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000113:7;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1295797	1299963	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711197.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1;transcript_id=HG00140_ch_T0000113;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000113;transcript_name=HG00140_ch_T0000113;gene_name=ASMTL;ID=intron:HG00140_ch_T0000113:7;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1299964	1300072	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711197.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1;transcript_id=HG00140_ch_T0000113;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000113;transcript_name=HG00140_ch_T0000113;gene_name=ASMTL;ID=exon:HG00140_ch_T0000113:8;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1299964	1300072	.	-	2	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711197.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1;transcript_id=HG00140_ch_T0000113;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000113;transcript_name=HG00140_ch_T0000113;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000113:8;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1300073	1303253	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711197.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1;transcript_id=HG00140_ch_T0000113;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000113;transcript_name=HG00140_ch_T0000113;gene_name=ASMTL;ID=intron:HG00140_ch_T0000113:8;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1303254	1303315	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711197.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1;transcript_id=HG00140_ch_T0000113;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000113;transcript_name=HG00140_ch_T0000113;gene_name=ASMTL;ID=exon:HG00140_ch_T0000113:9;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1303254	1303315	.	-	1	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711197.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1;transcript_id=HG00140_ch_T0000113;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000113;transcript_name=HG00140_ch_T0000113;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000113:9;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1303316	1303925	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711197.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1;transcript_id=HG00140_ch_T0000113;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000113;transcript_name=HG00140_ch_T0000113;gene_name=ASMTL;ID=intron:HG00140_ch_T0000113:9;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1303926	1303990	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711197.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1;transcript_id=HG00140_ch_T0000113;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000113;transcript_name=HG00140_ch_T0000113;gene_name=ASMTL;ID=exon:HG00140_ch_T0000113:10;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1303926	1303990	.	-	0	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711197.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1;transcript_id=HG00140_ch_T0000113;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000113;transcript_name=HG00140_ch_T0000113;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000113:10;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1303991	1307328	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711197.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1;transcript_id=HG00140_ch_T0000113;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000113;transcript_name=HG00140_ch_T0000113;gene_name=ASMTL;ID=intron:HG00140_ch_T0000113:10;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1307329	1307376	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711197.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1;transcript_id=HG00140_ch_T0000113;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000113;transcript_name=HG00140_ch_T0000113;gene_name=ASMTL;ID=exon:HG00140_ch_T0000113:11;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1307329	1307376	.	-	0	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711197.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1;transcript_id=HG00140_ch_T0000113;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000113;transcript_name=HG00140_ch_T0000113;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000113:11;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1307377	1310417	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711197.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1;transcript_id=HG00140_ch_T0000113;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000113;transcript_name=HG00140_ch_T0000113;gene_name=ASMTL;ID=intron:HG00140_ch_T0000113:11;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1310418	1310549	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711197.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1;transcript_id=HG00140_ch_T0000113;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000113;transcript_name=HG00140_ch_T0000113;gene_name=ASMTL;ID=exon:HG00140_ch_T0000113:12;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1310418	1310549	.	-	0	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711197.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1;transcript_id=HG00140_ch_T0000113;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000113;transcript_name=HG00140_ch_T0000113;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000113:12;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1310550	1320790	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711197.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1;transcript_id=HG00140_ch_T0000113;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000113;transcript_name=HG00140_ch_T0000113;gene_name=ASMTL;ID=intron:HG00140_ch_T0000113:12;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1320791	1320952	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711197.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1;transcript_id=HG00140_ch_T0000113;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000113;transcript_name=HG00140_ch_T0000113;gene_name=ASMTL;ID=exon:HG00140_ch_T0000113:13;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1320791	1320883	.	-	0	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711197.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1;transcript_id=HG00140_ch_T0000113;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000113;transcript_name=HG00140_ch_T0000113;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000113:13;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	1320881	1320883	.	-	0	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711197.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711197.1;transcript_id=HG00140_ch_T0000113;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000113;transcript_name=HG00140_ch_T0000113;gene_name=ASMTL;ID=start_codon:HG00140_ch_T0000113;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1272862	1321806	100	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000114;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_G0000031;transcript_name=HG00140_ch_T0000114;gene_name=ASMTL;ID=HG00140_ch_T0000114;Name=ASMTL
HG00140_chrY	CAT	exon	1272862	1273211	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000114;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000114;transcript_name=HG00140_ch_T0000114;gene_name=ASMTL;ID=exon:HG00140_ch_T0000114:0;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1272992	1273211	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000114;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000114;transcript_name=HG00140_ch_T0000114;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000114:0;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1273212	1280396	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000114;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000114;transcript_name=HG00140_ch_T0000114;gene_name=ASMTL;ID=intron:HG00140_ch_T0000114:0;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1280397	1280519	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000114;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000114;transcript_name=HG00140_ch_T0000114;gene_name=ASMTL;ID=exon:HG00140_ch_T0000114:1;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1280397	1280519	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000114;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000114;transcript_name=HG00140_ch_T0000114;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000114:1;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1280520	1285652	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000114;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000114;transcript_name=HG00140_ch_T0000114;gene_name=ASMTL;ID=intron:HG00140_ch_T0000114:1;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1285653	1285796	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000114;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000114;transcript_name=HG00140_ch_T0000114;gene_name=ASMTL;ID=exon:HG00140_ch_T0000114:2;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1285653	1285796	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000114;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000114;transcript_name=HG00140_ch_T0000114;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000114:2;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1285797	1286661	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000114;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000114;transcript_name=HG00140_ch_T0000114;gene_name=ASMTL;ID=intron:HG00140_ch_T0000114:2;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1286662	1286794	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000114;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000114;transcript_name=HG00140_ch_T0000114;gene_name=ASMTL;ID=exon:HG00140_ch_T0000114:3;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1286662	1286794	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000114;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000114;transcript_name=HG00140_ch_T0000114;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000114:3;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1286795	1289336	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000114;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000114;transcript_name=HG00140_ch_T0000114;gene_name=ASMTL;ID=intron:HG00140_ch_T0000114:3;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1289337	1289521	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000114;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000114;transcript_name=HG00140_ch_T0000114;gene_name=ASMTL;ID=exon:HG00140_ch_T0000114:4;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1289337	1289521	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000114;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000114;transcript_name=HG00140_ch_T0000114;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000114:4;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1289522	1293199	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000114;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000114;transcript_name=HG00140_ch_T0000114;gene_name=ASMTL;ID=intron:HG00140_ch_T0000114:4;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1293200	1293362	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000114;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000114;transcript_name=HG00140_ch_T0000114;gene_name=ASMTL;ID=exon:HG00140_ch_T0000114:5;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1293200	1293362	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000114;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000114;transcript_name=HG00140_ch_T0000114;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000114:5;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1293363	1295408	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000114;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000114;transcript_name=HG00140_ch_T0000114;gene_name=ASMTL;ID=intron:HG00140_ch_T0000114:5;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1295409	1295796	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000114;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000114;transcript_name=HG00140_ch_T0000114;gene_name=ASMTL;ID=exon:HG00140_ch_T0000114:6;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1295409	1295796	.	-	1	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000114;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000114;transcript_name=HG00140_ch_T0000114;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000114:6;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1295797	1299963	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000114;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000114;transcript_name=HG00140_ch_T0000114;gene_name=ASMTL;ID=intron:HG00140_ch_T0000114:6;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1299964	1300072	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000114;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000114;transcript_name=HG00140_ch_T0000114;gene_name=ASMTL;ID=exon:HG00140_ch_T0000114:7;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1299964	1300072	.	-	2	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000114;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000114;transcript_name=HG00140_ch_T0000114;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000114:7;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1300073	1303253	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000114;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000114;transcript_name=HG00140_ch_T0000114;gene_name=ASMTL;ID=intron:HG00140_ch_T0000114:7;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1303254	1303315	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000114;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000114;transcript_name=HG00140_ch_T0000114;gene_name=ASMTL;ID=exon:HG00140_ch_T0000114:8;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1303254	1303315	.	-	1	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000114;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000114;transcript_name=HG00140_ch_T0000114;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000114:8;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1303316	1303925	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000114;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000114;transcript_name=HG00140_ch_T0000114;gene_name=ASMTL;ID=intron:HG00140_ch_T0000114:8;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1303926	1303990	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000114;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000114;transcript_name=HG00140_ch_T0000114;gene_name=ASMTL;ID=exon:HG00140_ch_T0000114:9;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1303926	1303990	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000114;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000114;transcript_name=HG00140_ch_T0000114;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000114:9;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1303991	1307328	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000114;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000114;transcript_name=HG00140_ch_T0000114;gene_name=ASMTL;ID=intron:HG00140_ch_T0000114:9;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1307329	1307376	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000114;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000114;transcript_name=HG00140_ch_T0000114;gene_name=ASMTL;ID=exon:HG00140_ch_T0000114:10;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1307329	1307376	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000114;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000114;transcript_name=HG00140_ch_T0000114;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000114:10;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1307377	1310417	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000114;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000114;transcript_name=HG00140_ch_T0000114;gene_name=ASMTL;ID=intron:HG00140_ch_T0000114:10;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1310418	1310549	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000114;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000114;transcript_name=HG00140_ch_T0000114;gene_name=ASMTL;ID=exon:HG00140_ch_T0000114:11;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1310418	1310468	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000114;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000114;transcript_name=HG00140_ch_T0000114;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000114:11;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	1310466	1310468	.	-	0	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000114;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000114;transcript_name=HG00140_ch_T0000114;gene_name=ASMTL;ID=start_codon:HG00140_ch_T0000114;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1310550	1321661	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000114;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000114;transcript_name=HG00140_ch_T0000114;gene_name=ASMTL;ID=intron:HG00140_ch_T0000114:11;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1321662	1321806	.	-	.	source_transcript=ENST00000711192.1;source_transcript_name=ASMTL-207;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000114;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000114;transcript_name=HG00140_ch_T0000114;gene_name=ASMTL;ID=exon:HG00140_ch_T0000114:12;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1272862	1320952	100	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000115;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_G0000031;transcript_name=HG00140_ch_T0000115;gene_name=ASMTL;ID=HG00140_ch_T0000115;Name=ASMTL
HG00140_chrY	CAT	exon	1272862	1273211	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000115;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000115;transcript_name=HG00140_ch_T0000115;gene_name=ASMTL;ID=exon:HG00140_ch_T0000115:0;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1272992	1273211	.	-	2	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000115;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000115;transcript_name=HG00140_ch_T0000115;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000115:0;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1273212	1280396	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000115;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000115;transcript_name=HG00140_ch_T0000115;gene_name=ASMTL;ID=intron:HG00140_ch_T0000115:0;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1280397	1280519	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000115;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000115;transcript_name=HG00140_ch_T0000115;gene_name=ASMTL;ID=exon:HG00140_ch_T0000115:1;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1280397	1280519	.	-	2	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000115;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000115;transcript_name=HG00140_ch_T0000115;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000115:1;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1280520	1285652	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000115;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000115;transcript_name=HG00140_ch_T0000115;gene_name=ASMTL;ID=intron:HG00140_ch_T0000115:1;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1285653	1285796	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000115;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000115;transcript_name=HG00140_ch_T0000115;gene_name=ASMTL;ID=exon:HG00140_ch_T0000115:2;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1285653	1285796	.	-	2	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000115;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000115;transcript_name=HG00140_ch_T0000115;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000115:2;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1285797	1286661	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000115;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000115;transcript_name=HG00140_ch_T0000115;gene_name=ASMTL;ID=intron:HG00140_ch_T0000115:2;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1286662	1286794	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000115;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000115;transcript_name=HG00140_ch_T0000115;gene_name=ASMTL;ID=exon:HG00140_ch_T0000115:3;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1286662	1286794	.	-	0	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000115;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000115;transcript_name=HG00140_ch_T0000115;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000115:3;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1286795	1289336	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000115;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000115;transcript_name=HG00140_ch_T0000115;gene_name=ASMTL;ID=intron:HG00140_ch_T0000115:3;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1289337	1289521	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000115;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000115;transcript_name=HG00140_ch_T0000115;gene_name=ASMTL;ID=exon:HG00140_ch_T0000115:4;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1289337	1289521	.	-	2	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000115;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000115;transcript_name=HG00140_ch_T0000115;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000115:4;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1289522	1293199	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000115;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000115;transcript_name=HG00140_ch_T0000115;gene_name=ASMTL;ID=intron:HG00140_ch_T0000115:4;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1293200	1293362	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000115;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000115;transcript_name=HG00140_ch_T0000115;gene_name=ASMTL;ID=exon:HG00140_ch_T0000115:5;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1293200	1293362	.	-	0	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000115;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000115;transcript_name=HG00140_ch_T0000115;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000115:5;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1293363	1295408	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000115;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000115;transcript_name=HG00140_ch_T0000115;gene_name=ASMTL;ID=intron:HG00140_ch_T0000115:5;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1295409	1295796	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000115;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000115;transcript_name=HG00140_ch_T0000115;gene_name=ASMTL;ID=exon:HG00140_ch_T0000115:6;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1295409	1295796	.	-	1	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000115;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000115;transcript_name=HG00140_ch_T0000115;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000115:6;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1295797	1299963	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000115;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000115;transcript_name=HG00140_ch_T0000115;gene_name=ASMTL;ID=intron:HG00140_ch_T0000115:6;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1299964	1300072	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000115;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000115;transcript_name=HG00140_ch_T0000115;gene_name=ASMTL;ID=exon:HG00140_ch_T0000115:7;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1299964	1300072	.	-	2	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000115;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000115;transcript_name=HG00140_ch_T0000115;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000115:7;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1300073	1303253	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000115;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000115;transcript_name=HG00140_ch_T0000115;gene_name=ASMTL;ID=intron:HG00140_ch_T0000115:7;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1303254	1303315	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000115;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000115;transcript_name=HG00140_ch_T0000115;gene_name=ASMTL;ID=exon:HG00140_ch_T0000115:8;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1303254	1303315	.	-	1	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000115;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000115;transcript_name=HG00140_ch_T0000115;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000115:8;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1303316	1303925	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000115;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000115;transcript_name=HG00140_ch_T0000115;gene_name=ASMTL;ID=intron:HG00140_ch_T0000115:8;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1303926	1303990	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000115;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000115;transcript_name=HG00140_ch_T0000115;gene_name=ASMTL;ID=exon:HG00140_ch_T0000115:9;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1303926	1303990	.	-	0	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000115;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000115;transcript_name=HG00140_ch_T0000115;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000115:9;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1303991	1307328	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000115;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000115;transcript_name=HG00140_ch_T0000115;gene_name=ASMTL;ID=intron:HG00140_ch_T0000115:9;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1307329	1307376	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000115;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000115;transcript_name=HG00140_ch_T0000115;gene_name=ASMTL;ID=exon:HG00140_ch_T0000115:10;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1307329	1307376	.	-	0	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000115;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000115;transcript_name=HG00140_ch_T0000115;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000115:10;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1307377	1310417	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000115;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000115;transcript_name=HG00140_ch_T0000115;gene_name=ASMTL;ID=intron:HG00140_ch_T0000115:10;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1310418	1310549	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000115;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000115;transcript_name=HG00140_ch_T0000115;gene_name=ASMTL;ID=exon:HG00140_ch_T0000115:11;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1310418	1310549	.	-	0	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000115;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000115;transcript_name=HG00140_ch_T0000115;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000115:11;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1310550	1320790	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000115;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000115;transcript_name=HG00140_ch_T0000115;gene_name=ASMTL;ID=intron:HG00140_ch_T0000115:11;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1320791	1320952	.	-	.	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000115;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000115;transcript_name=HG00140_ch_T0000115;gene_name=ASMTL;ID=exon:HG00140_ch_T0000115:12;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1320791	1320883	.	-	0	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000115;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000115;transcript_name=HG00140_ch_T0000115;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000115:12;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	1320881	1320883	.	-	0	source_transcript=ENST00000711197.1;source_transcript_name=ASMTL-212;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711197.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000115;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000115;transcript_name=HG00140_ch_T0000115;gene_name=ASMTL;ID=start_codon:HG00140_ch_T0000115;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1272864	1320972	9980	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711196.1;transcript_score=299.89;frameshift=True;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1;transcript_id=HG00140_ch_T0000116;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_G0000031;transcript_name=HG00140_ch_T0000116;gene_name=ASMTL;ID=HG00140_ch_T0000116;Name=ASMTL
HG00140_chrY	CAT	exon	1272864	1272993	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711196.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1;transcript_id=HG00140_ch_T0000116;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000116;transcript_name=HG00140_ch_T0000116;gene_name=ASMTL;ID=exon:HG00140_ch_T0000116:0;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1272992	1272993	.	-	2	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711196.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1;transcript_id=HG00140_ch_T0000116;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000116;transcript_name=HG00140_ch_T0000116;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000116:0;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1272994	1273211	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711196.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1;transcript_id=HG00140_ch_T0000116;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000116;transcript_name=HG00140_ch_T0000116;gene_name=ASMTL;ID=exon:HG00140_ch_T0000116:1;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1272994	1273211	.	-	2	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711196.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1;transcript_id=HG00140_ch_T0000116;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000116;transcript_name=HG00140_ch_T0000116;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000116:1;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1273212	1280396	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711196.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1;transcript_id=HG00140_ch_T0000116;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000116;transcript_name=HG00140_ch_T0000116;gene_name=ASMTL;ID=intron:HG00140_ch_T0000116:1;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1280397	1280519	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711196.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1;transcript_id=HG00140_ch_T0000116;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000116;transcript_name=HG00140_ch_T0000116;gene_name=ASMTL;ID=exon:HG00140_ch_T0000116:2;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1280397	1280519	.	-	2	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711196.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1;transcript_id=HG00140_ch_T0000116;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000116;transcript_name=HG00140_ch_T0000116;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000116:2;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1280520	1285652	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711196.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1;transcript_id=HG00140_ch_T0000116;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000116;transcript_name=HG00140_ch_T0000116;gene_name=ASMTL;ID=intron:HG00140_ch_T0000116:2;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1285653	1285796	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711196.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1;transcript_id=HG00140_ch_T0000116;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000116;transcript_name=HG00140_ch_T0000116;gene_name=ASMTL;ID=exon:HG00140_ch_T0000116:3;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1285653	1285796	.	-	2	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711196.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1;transcript_id=HG00140_ch_T0000116;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000116;transcript_name=HG00140_ch_T0000116;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000116:3;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1285797	1286661	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711196.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1;transcript_id=HG00140_ch_T0000116;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000116;transcript_name=HG00140_ch_T0000116;gene_name=ASMTL;ID=intron:HG00140_ch_T0000116:3;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1286662	1286794	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711196.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1;transcript_id=HG00140_ch_T0000116;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000116;transcript_name=HG00140_ch_T0000116;gene_name=ASMTL;ID=exon:HG00140_ch_T0000116:4;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1286662	1286794	.	-	0	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711196.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1;transcript_id=HG00140_ch_T0000116;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000116;transcript_name=HG00140_ch_T0000116;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000116:4;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1286795	1289336	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711196.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1;transcript_id=HG00140_ch_T0000116;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000116;transcript_name=HG00140_ch_T0000116;gene_name=ASMTL;ID=intron:HG00140_ch_T0000116:4;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1289337	1289521	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711196.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1;transcript_id=HG00140_ch_T0000116;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000116;transcript_name=HG00140_ch_T0000116;gene_name=ASMTL;ID=exon:HG00140_ch_T0000116:5;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1289337	1289521	.	-	2	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711196.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1;transcript_id=HG00140_ch_T0000116;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000116;transcript_name=HG00140_ch_T0000116;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000116:5;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1289522	1293199	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711196.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1;transcript_id=HG00140_ch_T0000116;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000116;transcript_name=HG00140_ch_T0000116;gene_name=ASMTL;ID=intron:HG00140_ch_T0000116:5;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1293200	1293362	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711196.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1;transcript_id=HG00140_ch_T0000116;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000116;transcript_name=HG00140_ch_T0000116;gene_name=ASMTL;ID=exon:HG00140_ch_T0000116:6;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1293200	1293362	.	-	0	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711196.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1;transcript_id=HG00140_ch_T0000116;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000116;transcript_name=HG00140_ch_T0000116;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000116:6;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1293363	1295408	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711196.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1;transcript_id=HG00140_ch_T0000116;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000116;transcript_name=HG00140_ch_T0000116;gene_name=ASMTL;ID=intron:HG00140_ch_T0000116:6;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1295409	1295796	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711196.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1;transcript_id=HG00140_ch_T0000116;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000116;transcript_name=HG00140_ch_T0000116;gene_name=ASMTL;ID=exon:HG00140_ch_T0000116:7;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1295409	1295796	.	-	1	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711196.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1;transcript_id=HG00140_ch_T0000116;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000116;transcript_name=HG00140_ch_T0000116;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000116:7;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1295797	1299963	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711196.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1;transcript_id=HG00140_ch_T0000116;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000116;transcript_name=HG00140_ch_T0000116;gene_name=ASMTL;ID=intron:HG00140_ch_T0000116:7;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1299964	1300072	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711196.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1;transcript_id=HG00140_ch_T0000116;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000116;transcript_name=HG00140_ch_T0000116;gene_name=ASMTL;ID=exon:HG00140_ch_T0000116:8;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1299964	1300072	.	-	2	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711196.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1;transcript_id=HG00140_ch_T0000116;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000116;transcript_name=HG00140_ch_T0000116;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000116:8;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1300073	1303253	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711196.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1;transcript_id=HG00140_ch_T0000116;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000116;transcript_name=HG00140_ch_T0000116;gene_name=ASMTL;ID=intron:HG00140_ch_T0000116:8;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1303254	1303315	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711196.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1;transcript_id=HG00140_ch_T0000116;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000116;transcript_name=HG00140_ch_T0000116;gene_name=ASMTL;ID=exon:HG00140_ch_T0000116:9;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1303254	1303315	.	-	1	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711196.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1;transcript_id=HG00140_ch_T0000116;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000116;transcript_name=HG00140_ch_T0000116;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000116:9;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1303316	1303925	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711196.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1;transcript_id=HG00140_ch_T0000116;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000116;transcript_name=HG00140_ch_T0000116;gene_name=ASMTL;ID=intron:HG00140_ch_T0000116:9;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1303926	1303990	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711196.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1;transcript_id=HG00140_ch_T0000116;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000116;transcript_name=HG00140_ch_T0000116;gene_name=ASMTL;ID=exon:HG00140_ch_T0000116:10;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1303926	1303990	.	-	0	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711196.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1;transcript_id=HG00140_ch_T0000116;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000116;transcript_name=HG00140_ch_T0000116;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000116:10;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1303991	1310417	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711196.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1;transcript_id=HG00140_ch_T0000116;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000116;transcript_name=HG00140_ch_T0000116;gene_name=ASMTL;ID=intron:HG00140_ch_T0000116:10;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1310418	1310549	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711196.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1;transcript_id=HG00140_ch_T0000116;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000116;transcript_name=HG00140_ch_T0000116;gene_name=ASMTL;ID=exon:HG00140_ch_T0000116:11;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1310418	1310549	.	-	0	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711196.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1;transcript_id=HG00140_ch_T0000116;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000116;transcript_name=HG00140_ch_T0000116;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000116:11;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1310550	1320790	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711196.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1;transcript_id=HG00140_ch_T0000116;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000116;transcript_name=HG00140_ch_T0000116;gene_name=ASMTL;ID=intron:HG00140_ch_T0000116:11;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1320791	1320972	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711196.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1;transcript_id=HG00140_ch_T0000116;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000116;transcript_name=HG00140_ch_T0000116;gene_name=ASMTL;ID=exon:HG00140_ch_T0000116:12;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1320791	1320883	.	-	0	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711196.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1;transcript_id=HG00140_ch_T0000116;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000116;transcript_name=HG00140_ch_T0000116;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000116:12;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	1320881	1320883	.	-	0	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=transMap;normalized_transcript_id=ENST00000711196.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711196.1;transcript_id=HG00140_ch_T0000116;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000116;transcript_name=HG00140_ch_T0000116;gene_name=ASMTL;ID=start_codon:HG00140_ch_T0000116;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1272864	1320972	100	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000117;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_G0000031;transcript_name=HG00140_ch_T0000117;gene_name=ASMTL;ID=HG00140_ch_T0000117;Name=ASMTL
HG00140_chrY	CAT	exon	1272864	1273211	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000117;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000117;transcript_name=HG00140_ch_T0000117;gene_name=ASMTL;ID=exon:HG00140_ch_T0000117:0;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1272992	1273211	.	-	2	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000117;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000117;transcript_name=HG00140_ch_T0000117;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000117:0;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1273212	1280396	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000117;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000117;transcript_name=HG00140_ch_T0000117;gene_name=ASMTL;ID=intron:HG00140_ch_T0000117:0;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1280397	1280519	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000117;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000117;transcript_name=HG00140_ch_T0000117;gene_name=ASMTL;ID=exon:HG00140_ch_T0000117:1;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1280397	1280519	.	-	2	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000117;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000117;transcript_name=HG00140_ch_T0000117;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000117:1;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1280520	1285652	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000117;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000117;transcript_name=HG00140_ch_T0000117;gene_name=ASMTL;ID=intron:HG00140_ch_T0000117:1;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1285653	1285796	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000117;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000117;transcript_name=HG00140_ch_T0000117;gene_name=ASMTL;ID=exon:HG00140_ch_T0000117:2;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1285653	1285796	.	-	2	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000117;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000117;transcript_name=HG00140_ch_T0000117;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000117:2;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1285797	1286661	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000117;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000117;transcript_name=HG00140_ch_T0000117;gene_name=ASMTL;ID=intron:HG00140_ch_T0000117:2;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1286662	1286794	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000117;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000117;transcript_name=HG00140_ch_T0000117;gene_name=ASMTL;ID=exon:HG00140_ch_T0000117:3;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1286662	1286794	.	-	0	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000117;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000117;transcript_name=HG00140_ch_T0000117;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000117:3;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1286795	1289336	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000117;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000117;transcript_name=HG00140_ch_T0000117;gene_name=ASMTL;ID=intron:HG00140_ch_T0000117:3;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1289337	1289521	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000117;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000117;transcript_name=HG00140_ch_T0000117;gene_name=ASMTL;ID=exon:HG00140_ch_T0000117:4;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1289337	1289521	.	-	2	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000117;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000117;transcript_name=HG00140_ch_T0000117;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000117:4;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1289522	1293199	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000117;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000117;transcript_name=HG00140_ch_T0000117;gene_name=ASMTL;ID=intron:HG00140_ch_T0000117:4;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1293200	1293362	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000117;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000117;transcript_name=HG00140_ch_T0000117;gene_name=ASMTL;ID=exon:HG00140_ch_T0000117:5;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1293200	1293362	.	-	0	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000117;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000117;transcript_name=HG00140_ch_T0000117;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000117:5;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1293363	1295408	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000117;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000117;transcript_name=HG00140_ch_T0000117;gene_name=ASMTL;ID=intron:HG00140_ch_T0000117:5;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1295409	1295796	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000117;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000117;transcript_name=HG00140_ch_T0000117;gene_name=ASMTL;ID=exon:HG00140_ch_T0000117:6;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1295409	1295796	.	-	1	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000117;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000117;transcript_name=HG00140_ch_T0000117;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000117:6;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1295797	1299963	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000117;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000117;transcript_name=HG00140_ch_T0000117;gene_name=ASMTL;ID=intron:HG00140_ch_T0000117:6;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1299964	1300072	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000117;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000117;transcript_name=HG00140_ch_T0000117;gene_name=ASMTL;ID=exon:HG00140_ch_T0000117:7;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1299964	1300072	.	-	2	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000117;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000117;transcript_name=HG00140_ch_T0000117;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000117:7;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1300073	1303253	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000117;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000117;transcript_name=HG00140_ch_T0000117;gene_name=ASMTL;ID=intron:HG00140_ch_T0000117:7;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1303254	1303315	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000117;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000117;transcript_name=HG00140_ch_T0000117;gene_name=ASMTL;ID=exon:HG00140_ch_T0000117:8;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1303254	1303315	.	-	1	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000117;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000117;transcript_name=HG00140_ch_T0000117;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000117:8;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1303316	1303925	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000117;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000117;transcript_name=HG00140_ch_T0000117;gene_name=ASMTL;ID=intron:HG00140_ch_T0000117:8;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1303926	1303990	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000117;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000117;transcript_name=HG00140_ch_T0000117;gene_name=ASMTL;ID=exon:HG00140_ch_T0000117:9;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1303926	1303990	.	-	0	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000117;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000117;transcript_name=HG00140_ch_T0000117;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000117:9;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1303991	1310417	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000117;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000117;transcript_name=HG00140_ch_T0000117;gene_name=ASMTL;ID=intron:HG00140_ch_T0000117:9;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1310418	1310549	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000117;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000117;transcript_name=HG00140_ch_T0000117;gene_name=ASMTL;ID=exon:HG00140_ch_T0000117:10;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1310418	1310549	.	-	0	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000117;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000117;transcript_name=HG00140_ch_T0000117;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000117:10;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1310550	1320790	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000117;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000117;transcript_name=HG00140_ch_T0000117;gene_name=ASMTL;ID=intron:HG00140_ch_T0000117:10;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1320791	1320972	.	-	.	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000117;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000117;transcript_name=HG00140_ch_T0000117;gene_name=ASMTL;ID=exon:HG00140_ch_T0000117:11;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1320791	1320883	.	-	0	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000117;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000117;transcript_name=HG00140_ch_T0000117;gene_name=ASMTL;ID=CDS:HG00140_ch_T0000117:11;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	1320881	1320883	.	-	0	source_transcript=ENST00000711196.1;source_transcript_name=ASMTL-211;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;transcript_id=HG00140_ch_T0000117;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000117;transcript_name=HG00140_ch_T0000117;gene_name=ASMTL;ID=start_codon:HG00140_ch_T0000117;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1295402	1303623	1000	-	.	source_transcript=ENST00000711195.1;source_transcript_name=ASMTL-210;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711195.1;transcript_score=299.88599999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711195.1,ENST00000711195.1;transcript_id=HG00140_ch_T0000121;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_G0000031;transcript_name=HG00140_ch_T0000121;gene_name=ASMTL;ID=HG00140_ch_T0000121;Name=ASMTL
HG00140_chrY	CAT	exon	1295402	1295796	.	-	.	source_transcript=ENST00000711195.1;source_transcript_name=ASMTL-210;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711195.1;transcript_score=299.88599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711195.1,ENST00000711195.1;transcript_id=HG00140_ch_T0000121;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000121;transcript_name=HG00140_ch_T0000121;gene_name=ASMTL;ID=exon:HG00140_ch_T0000121:0;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1295797	1299963	.	-	.	source_transcript=ENST00000711195.1;source_transcript_name=ASMTL-210;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711195.1;transcript_score=299.88599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711195.1,ENST00000711195.1;transcript_id=HG00140_ch_T0000121;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000121;transcript_name=HG00140_ch_T0000121;gene_name=ASMTL;ID=intron:HG00140_ch_T0000121:0;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1299964	1300072	.	-	.	source_transcript=ENST00000711195.1;source_transcript_name=ASMTL-210;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711195.1;transcript_score=299.88599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711195.1,ENST00000711195.1;transcript_id=HG00140_ch_T0000121;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000121;transcript_name=HG00140_ch_T0000121;gene_name=ASMTL;ID=exon:HG00140_ch_T0000121:1;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1300073	1303253	.	-	.	source_transcript=ENST00000711195.1;source_transcript_name=ASMTL-210;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711195.1;transcript_score=299.88599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711195.1,ENST00000711195.1;transcript_id=HG00140_ch_T0000121;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000121;transcript_name=HG00140_ch_T0000121;gene_name=ASMTL;ID=intron:HG00140_ch_T0000121:1;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1303254	1303623	.	-	.	source_transcript=ENST00000711195.1;source_transcript_name=ASMTL-210;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711195.1;transcript_score=299.88599999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711195.1,ENST00000711195.1;transcript_id=HG00140_ch_T0000121;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000121;transcript_name=HG00140_ch_T0000121;gene_name=ASMTL;ID=exon:HG00140_ch_T0000121:2;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1299597	1303960	1000	-	.	source_transcript=ENST00000711194.1;source_transcript_name=ASMTL-209;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711194.1;transcript_score=299.825;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711194.1,ENST00000711194.1;transcript_id=HG00140_ch_T0000122;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_G0000031;transcript_name=HG00140_ch_T0000122;gene_name=ASMTL;ID=HG00140_ch_T0000122;Name=ASMTL
HG00140_chrY	CAT	exon	1299597	1300072	.	-	.	source_transcript=ENST00000711194.1;source_transcript_name=ASMTL-209;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711194.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711194.1,ENST00000711194.1;transcript_id=HG00140_ch_T0000122;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000122;transcript_name=HG00140_ch_T0000122;gene_name=ASMTL;ID=exon:HG00140_ch_T0000122:0;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1300073	1303253	.	-	.	source_transcript=ENST00000711194.1;source_transcript_name=ASMTL-209;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711194.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711194.1,ENST00000711194.1;transcript_id=HG00140_ch_T0000122;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000122;transcript_name=HG00140_ch_T0000122;gene_name=ASMTL;ID=intron:HG00140_ch_T0000122:0;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1303254	1303315	.	-	.	source_transcript=ENST00000711194.1;source_transcript_name=ASMTL-209;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711194.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711194.1,ENST00000711194.1;transcript_id=HG00140_ch_T0000122;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000122;transcript_name=HG00140_ch_T0000122;gene_name=ASMTL;ID=exon:HG00140_ch_T0000122:1;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1303316	1303925	.	-	.	source_transcript=ENST00000711194.1;source_transcript_name=ASMTL-209;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711194.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711194.1,ENST00000711194.1;transcript_id=HG00140_ch_T0000122;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000122;transcript_name=HG00140_ch_T0000122;gene_name=ASMTL;ID=intron:HG00140_ch_T0000122:1;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1303926	1303960	.	-	.	source_transcript=ENST00000711194.1;source_transcript_name=ASMTL-209;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711194.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711194.1,ENST00000711194.1;transcript_id=HG00140_ch_T0000122;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000122;transcript_name=HG00140_ch_T0000122;gene_name=ASMTL;ID=exon:HG00140_ch_T0000122:2;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1309824	1320915	1000	-	.	source_transcript=ENST00000711193.1;source_transcript_name=ASMTL-208;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711193.1;transcript_score=299.882;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711193.1,ENST00000711193.1;transcript_id=HG00140_ch_T0000123;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_G0000031;transcript_name=HG00140_ch_T0000123;gene_name=ASMTL;ID=HG00140_ch_T0000123;Name=ASMTL
HG00140_chrY	CAT	exon	1309824	1310549	.	-	.	source_transcript=ENST00000711193.1;source_transcript_name=ASMTL-208;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711193.1;transcript_score=299.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711193.1,ENST00000711193.1;transcript_id=HG00140_ch_T0000123;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000123;transcript_name=HG00140_ch_T0000123;gene_name=ASMTL;ID=exon:HG00140_ch_T0000123:0;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1310550	1320790	.	-	.	source_transcript=ENST00000711193.1;source_transcript_name=ASMTL-208;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711193.1;transcript_score=299.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711193.1,ENST00000711193.1;transcript_id=HG00140_ch_T0000123;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000123;transcript_name=HG00140_ch_T0000123;gene_name=ASMTL;ID=intron:HG00140_ch_T0000123:0;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1320791	1320915	.	-	.	source_transcript=ENST00000711193.1;source_transcript_name=ASMTL-208;source_gene=ENSG00000292339.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292339.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711193.1;transcript_score=299.882;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;alternative_source_transcripts=ENST00000711193.1,ENST00000711193.1;transcript_id=HG00140_ch_T0000123;gene_id=HG00140_ch_G0000031;Parent=HG00140_ch_T0000123;transcript_name=HG00140_ch_T0000123;gene_name=ASMTL;ID=exon:HG00140_ch_T0000123:1;Name=ASMTL;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	1330633	1405900	.	-	.	source_gene_common_name=P2RY8;source_gene=ENSG00000292333.1;alternative_source_transcripts=ENST00000711216.1,ENST00000711216.1;gene_id=HG00140_ch_G0000032;gene_biotype=protein_coding;gene_name=P2RY8;gene_sources=liftoff;ID=HG00140_ch_G0000032;Name=P2RY8
HG00140_chrY	CAT	transcript	1330633	1405900	100	-	.	source_transcript=ENST00000711216.1;source_transcript_name=P2RY8-204;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711216.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711216.1,ENST00000711216.1;transcript_id=HG00140_ch_T0000124;gene_id=HG00140_ch_G0000032;Parent=HG00140_ch_G0000032;transcript_name=HG00140_ch_T0000124;gene_name=P2RY8;ID=HG00140_ch_T0000124;Name=P2RY8
HG00140_chrY	CAT	exon	1330633	1334632	.	-	.	source_transcript=ENST00000711216.1;source_transcript_name=P2RY8-204;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711216.1,ENST00000711216.1;transcript_id=HG00140_ch_T0000124;gene_id=HG00140_ch_G0000032;Parent=HG00140_ch_T0000124;transcript_name=HG00140_ch_T0000124;gene_name=P2RY8;ID=exon:HG00140_ch_T0000124:0;Name=P2RY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1333529	1334608	.	-	0	source_transcript=ENST00000711216.1;source_transcript_name=P2RY8-204;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711216.1,ENST00000711216.1;transcript_id=HG00140_ch_T0000124;gene_id=HG00140_ch_G0000032;Parent=HG00140_ch_T0000124;transcript_name=HG00140_ch_T0000124;gene_name=P2RY8;ID=CDS:HG00140_ch_T0000124:0;Name=P2RY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	1333529	1333531	.	-	0	source_transcript=ENST00000711216.1;source_transcript_name=P2RY8-204;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711216.1,ENST00000711216.1;transcript_id=HG00140_ch_T0000124;gene_id=HG00140_ch_G0000032;Parent=HG00140_ch_T0000124;transcript_name=HG00140_ch_T0000124;gene_name=P2RY8;ID=stop_codon:HG00140_ch_T0000124;Name=P2RY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	1334606	1334608	.	-	0	source_transcript=ENST00000711216.1;source_transcript_name=P2RY8-204;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711216.1,ENST00000711216.1;transcript_id=HG00140_ch_T0000124;gene_id=HG00140_ch_G0000032;Parent=HG00140_ch_T0000124;transcript_name=HG00140_ch_T0000124;gene_name=P2RY8;ID=start_codon:HG00140_ch_T0000124;Name=P2RY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1334633	1405635	.	-	.	source_transcript=ENST00000711216.1;source_transcript_name=P2RY8-204;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711216.1,ENST00000711216.1;transcript_id=HG00140_ch_T0000124;gene_id=HG00140_ch_G0000032;Parent=HG00140_ch_T0000124;transcript_name=HG00140_ch_T0000124;gene_name=P2RY8;ID=intron:HG00140_ch_T0000124:0;Name=P2RY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1405636	1405900	.	-	.	source_transcript=ENST00000711216.1;source_transcript_name=P2RY8-204;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711216.1,ENST00000711216.1;transcript_id=HG00140_ch_T0000124;gene_id=HG00140_ch_G0000032;Parent=HG00140_ch_T0000124;transcript_name=HG00140_ch_T0000124;gene_name=P2RY8;ID=exon:HG00140_ch_T0000124:1;Name=P2RY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1334487	1362788	100	-	.	source_transcript=ENST00000711215.1;source_transcript_name=P2RY8-203;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711215.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711215.1,ENST00000711215.1;transcript_id=HG00140_ch_T0000125;gene_id=HG00140_ch_G0000032;Parent=HG00140_ch_G0000032;transcript_name=HG00140_ch_T0000125;gene_name=P2RY8;ID=HG00140_ch_T0000125;Name=P2RY8
HG00140_chrY	CAT	exon	1334487	1334632	.	-	.	source_transcript=ENST00000711215.1;source_transcript_name=P2RY8-203;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711215.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711215.1,ENST00000711215.1;transcript_id=HG00140_ch_T0000125;gene_id=HG00140_ch_G0000032;Parent=HG00140_ch_T0000125;transcript_name=HG00140_ch_T0000125;gene_name=P2RY8;ID=exon:HG00140_ch_T0000125:0;Name=P2RY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1334487	1334608	.	-	0	source_transcript=ENST00000711215.1;source_transcript_name=P2RY8-203;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711215.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711215.1,ENST00000711215.1;transcript_id=HG00140_ch_T0000125;gene_id=HG00140_ch_G0000032;Parent=HG00140_ch_T0000125;transcript_name=HG00140_ch_T0000125;gene_name=P2RY8;ID=CDS:HG00140_ch_T0000125:0;Name=P2RY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	1334606	1334608	.	-	0	source_transcript=ENST00000711215.1;source_transcript_name=P2RY8-203;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711215.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711215.1,ENST00000711215.1;transcript_id=HG00140_ch_T0000125;gene_id=HG00140_ch_G0000032;Parent=HG00140_ch_T0000125;transcript_name=HG00140_ch_T0000125;gene_name=P2RY8;ID=start_codon:HG00140_ch_T0000125;Name=P2RY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1334633	1362527	.	-	.	source_transcript=ENST00000711215.1;source_transcript_name=P2RY8-203;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711215.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711215.1,ENST00000711215.1;transcript_id=HG00140_ch_T0000125;gene_id=HG00140_ch_G0000032;Parent=HG00140_ch_T0000125;transcript_name=HG00140_ch_T0000125;gene_name=P2RY8;ID=intron:HG00140_ch_T0000125:0;Name=P2RY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1362528	1362788	.	-	.	source_transcript=ENST00000711215.1;source_transcript_name=P2RY8-203;source_gene=ENSG00000292333.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292333.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711215.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=ENST00000711215.1,ENST00000711215.1;transcript_id=HG00140_ch_T0000125;gene_id=HG00140_ch_G0000032;Parent=HG00140_ch_T0000125;transcript_name=HG00140_ch_T0000125;gene_name=P2RY8;ID=exon:HG00140_ch_T0000125:1;Name=P2RY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	1421496	1433756	.	-	.	source_gene_common_name=ENSG00000310546;source_gene=ENSG00000310546.1;alternative_source_transcripts=ENST00000850708.1,ENST00000850708.1;gene_id=HG00140_ch_G0000033;gene_biotype=lncRNA;gene_name=ENSG00000310546;gene_sources=liftoff;ID=HG00140_ch_G0000033;Name=ENSG00000310546
HG00140_chrY	CAT	transcript	1421496	1433756	1000	-	.	source_transcript=ENST00000850708.1;source_transcript_name=ENST00000850708;source_gene=ENSG00000310546.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310546.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850708.1;transcript_score=299.86;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310546;alternative_source_transcripts=ENST00000850708.1,ENST00000850708.1;transcript_id=HG00140_ch_T0000126;gene_id=HG00140_ch_G0000033;Parent=HG00140_ch_G0000033;transcript_name=HG00140_ch_T0000126;gene_name=ENSG00000310546;ID=HG00140_ch_T0000126;Name=ENSG00000310546
HG00140_chrY	CAT	exon	1421496	1422109	.	-	.	source_transcript=ENST00000850708.1;source_transcript_name=ENST00000850708;source_gene=ENSG00000310546.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310546.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850708.1;transcript_score=299.86;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310546;alternative_source_transcripts=ENST00000850708.1,ENST00000850708.1;transcript_id=HG00140_ch_T0000126;gene_id=HG00140_ch_G0000033;Parent=HG00140_ch_T0000126;transcript_name=HG00140_ch_T0000126;gene_name=ENSG00000310546;ID=exon:HG00140_ch_T0000126:0;Name=ENSG00000310546;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1422110	1433654	.	-	.	source_transcript=ENST00000850708.1;source_transcript_name=ENST00000850708;source_gene=ENSG00000310546.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310546.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850708.1;transcript_score=299.86;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310546;alternative_source_transcripts=ENST00000850708.1,ENST00000850708.1;transcript_id=HG00140_ch_T0000126;gene_id=HG00140_ch_G0000033;Parent=HG00140_ch_T0000126;transcript_name=HG00140_ch_T0000126;gene_name=ENSG00000310546;ID=intron:HG00140_ch_T0000126:0;Name=ENSG00000310546;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1433655	1433756	.	-	.	source_transcript=ENST00000850708.1;source_transcript_name=ENST00000850708;source_gene=ENSG00000310546.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310546.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850708.1;transcript_score=299.86;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310546;alternative_source_transcripts=ENST00000850708.1,ENST00000850708.1;transcript_id=HG00140_ch_T0000126;gene_id=HG00140_ch_G0000033;Parent=HG00140_ch_T0000126;transcript_name=HG00140_ch_T0000126;gene_name=ENSG00000310546;ID=exon:HG00140_ch_T0000126:1;Name=ENSG00000310546;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	1460110	1470792	.	+	.	source_gene_common_name=AKAP17A;source_gene=ENSG00000292343.1;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;gene_id=HG00140_ch_G0000034;gene_biotype=protein_coding;gene_name=AKAP17A;gene_sources=liftoff;ID=HG00140_ch_G0000034;Name=AKAP17A
HG00140_chrY	CAT	transcript	1460110	1470792	100	+	.	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=HG00140_ch_T0000127;gene_id=HG00140_ch_G0000034;Parent=HG00140_ch_G0000034;transcript_name=HG00140_ch_T0000127;gene_name=AKAP17A;ID=HG00140_ch_T0000127;Name=AKAP17A
HG00140_chrY	CAT	exon	1460110	1460275	.	+	.	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=HG00140_ch_T0000127;gene_id=HG00140_ch_G0000034;Parent=HG00140_ch_T0000127;transcript_name=HG00140_ch_T0000127;gene_name=AKAP17A;ID=exon:HG00140_ch_T0000127:0;Name=AKAP17A;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1460276	1461949	.	+	.	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=HG00140_ch_T0000127;gene_id=HG00140_ch_G0000034;Parent=HG00140_ch_T0000127;transcript_name=HG00140_ch_T0000127;gene_name=AKAP17A;ID=intron:HG00140_ch_T0000127:0;Name=AKAP17A;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1461950	1462730	.	+	.	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=HG00140_ch_T0000127;gene_id=HG00140_ch_G0000034;Parent=HG00140_ch_T0000127;transcript_name=HG00140_ch_T0000127;gene_name=AKAP17A;ID=exon:HG00140_ch_T0000127:1;Name=AKAP17A;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1461969	1462730	.	+	0	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=HG00140_ch_T0000127;gene_id=HG00140_ch_G0000034;Parent=HG00140_ch_T0000127;transcript_name=HG00140_ch_T0000127;gene_name=AKAP17A;ID=CDS:HG00140_ch_T0000127:0;Name=AKAP17A;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	1461969	1461971	.	+	0	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=HG00140_ch_T0000127;gene_id=HG00140_ch_G0000034;Parent=HG00140_ch_T0000127;transcript_name=HG00140_ch_T0000127;gene_name=AKAP17A;ID=start_codon:HG00140_ch_T0000127;Name=AKAP17A;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1462731	1463861	.	+	.	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=HG00140_ch_T0000127;gene_id=HG00140_ch_G0000034;Parent=HG00140_ch_T0000127;transcript_name=HG00140_ch_T0000127;gene_name=AKAP17A;ID=intron:HG00140_ch_T0000127:1;Name=AKAP17A;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1463862	1464010	.	+	.	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=HG00140_ch_T0000127;gene_id=HG00140_ch_G0000034;Parent=HG00140_ch_T0000127;transcript_name=HG00140_ch_T0000127;gene_name=AKAP17A;ID=exon:HG00140_ch_T0000127:2;Name=AKAP17A;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1463862	1464010	.	+	0	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=HG00140_ch_T0000127;gene_id=HG00140_ch_G0000034;Parent=HG00140_ch_T0000127;transcript_name=HG00140_ch_T0000127;gene_name=AKAP17A;ID=CDS:HG00140_ch_T0000127:1;Name=AKAP17A;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1464011	1467463	.	+	.	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=HG00140_ch_T0000127;gene_id=HG00140_ch_G0000034;Parent=HG00140_ch_T0000127;transcript_name=HG00140_ch_T0000127;gene_name=AKAP17A;ID=intron:HG00140_ch_T0000127:2;Name=AKAP17A;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1467464	1467704	.	+	.	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=HG00140_ch_T0000127;gene_id=HG00140_ch_G0000034;Parent=HG00140_ch_T0000127;transcript_name=HG00140_ch_T0000127;gene_name=AKAP17A;ID=exon:HG00140_ch_T0000127:3;Name=AKAP17A;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1467464	1467704	.	+	1	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=HG00140_ch_T0000127;gene_id=HG00140_ch_G0000034;Parent=HG00140_ch_T0000127;transcript_name=HG00140_ch_T0000127;gene_name=AKAP17A;ID=CDS:HG00140_ch_T0000127:2;Name=AKAP17A;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1467705	1468930	.	+	.	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=HG00140_ch_T0000127;gene_id=HG00140_ch_G0000034;Parent=HG00140_ch_T0000127;transcript_name=HG00140_ch_T0000127;gene_name=AKAP17A;ID=intron:HG00140_ch_T0000127:3;Name=AKAP17A;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1468931	1470792	.	+	.	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=HG00140_ch_T0000127;gene_id=HG00140_ch_G0000034;Parent=HG00140_ch_T0000127;transcript_name=HG00140_ch_T0000127;gene_name=AKAP17A;ID=exon:HG00140_ch_T0000127:4;Name=AKAP17A;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1468931	1469866	.	+	0	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=HG00140_ch_T0000127;gene_id=HG00140_ch_G0000034;Parent=HG00140_ch_T0000127;transcript_name=HG00140_ch_T0000127;gene_name=AKAP17A;ID=CDS:HG00140_ch_T0000127:3;Name=AKAP17A;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	1469864	1469866	.	+	0	source_transcript=ENST00000711132.1;source_transcript_name=AKAP17A-204;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711132.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711132.1,ENST00000711132.1;transcript_id=HG00140_ch_T0000127;gene_id=HG00140_ch_G0000034;Parent=HG00140_ch_T0000127;transcript_name=HG00140_ch_T0000127;gene_name=AKAP17A;ID=stop_codon:HG00140_ch_T0000127;Name=AKAP17A;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1460129	1470774	1000	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.907;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG00140_ch_T0000128;gene_id=HG00140_ch_G0000034;Parent=HG00140_ch_G0000034;transcript_name=HG00140_ch_T0000128;gene_name=AKAP17A;ID=HG00140_ch_T0000128;Name=AKAP17A
HG00140_chrY	CAT	exon	1460129	1460275	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.907;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG00140_ch_T0000128;gene_id=HG00140_ch_G0000034;Parent=HG00140_ch_T0000128;transcript_name=HG00140_ch_T0000128;gene_name=AKAP17A;ID=exon:HG00140_ch_T0000128:0;Name=AKAP17A;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1460276	1461949	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.907;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG00140_ch_T0000128;gene_id=HG00140_ch_G0000034;Parent=HG00140_ch_T0000128;transcript_name=HG00140_ch_T0000128;gene_name=AKAP17A;ID=intron:HG00140_ch_T0000128:0;Name=AKAP17A;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1461950	1462730	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.907;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG00140_ch_T0000128;gene_id=HG00140_ch_G0000034;Parent=HG00140_ch_T0000128;transcript_name=HG00140_ch_T0000128;gene_name=AKAP17A;ID=exon:HG00140_ch_T0000128:1;Name=AKAP17A;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1461969	1462730	.	+	0	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.907;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG00140_ch_T0000128;gene_id=HG00140_ch_G0000034;Parent=HG00140_ch_T0000128;transcript_name=HG00140_ch_T0000128;gene_name=AKAP17A;ID=CDS:HG00140_ch_T0000128:0;Name=AKAP17A;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	1461969	1461971	.	+	0	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.907;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG00140_ch_T0000128;gene_id=HG00140_ch_G0000034;Parent=HG00140_ch_T0000128;transcript_name=HG00140_ch_T0000128;gene_name=AKAP17A;ID=start_codon:HG00140_ch_T0000128;Name=AKAP17A;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1462731	1463861	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.907;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG00140_ch_T0000128;gene_id=HG00140_ch_G0000034;Parent=HG00140_ch_T0000128;transcript_name=HG00140_ch_T0000128;gene_name=AKAP17A;ID=intron:HG00140_ch_T0000128:1;Name=AKAP17A;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1463862	1464010	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.907;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG00140_ch_T0000128;gene_id=HG00140_ch_G0000034;Parent=HG00140_ch_T0000128;transcript_name=HG00140_ch_T0000128;gene_name=AKAP17A;ID=exon:HG00140_ch_T0000128:2;Name=AKAP17A;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1463862	1464010	.	+	0	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.907;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG00140_ch_T0000128;gene_id=HG00140_ch_G0000034;Parent=HG00140_ch_T0000128;transcript_name=HG00140_ch_T0000128;gene_name=AKAP17A;ID=CDS:HG00140_ch_T0000128:1;Name=AKAP17A;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1464011	1467463	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.907;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG00140_ch_T0000128;gene_id=HG00140_ch_G0000034;Parent=HG00140_ch_T0000128;transcript_name=HG00140_ch_T0000128;gene_name=AKAP17A;ID=intron:HG00140_ch_T0000128:2;Name=AKAP17A;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1467464	1467704	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.907;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG00140_ch_T0000128;gene_id=HG00140_ch_G0000034;Parent=HG00140_ch_T0000128;transcript_name=HG00140_ch_T0000128;gene_name=AKAP17A;ID=exon:HG00140_ch_T0000128:3;Name=AKAP17A;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1467464	1467704	.	+	1	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.907;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG00140_ch_T0000128;gene_id=HG00140_ch_G0000034;Parent=HG00140_ch_T0000128;transcript_name=HG00140_ch_T0000128;gene_name=AKAP17A;ID=CDS:HG00140_ch_T0000128:2;Name=AKAP17A;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1467705	1468409	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.907;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG00140_ch_T0000128;gene_id=HG00140_ch_G0000034;Parent=HG00140_ch_T0000128;transcript_name=HG00140_ch_T0000128;gene_name=AKAP17A;ID=intron:HG00140_ch_T0000128:3;Name=AKAP17A;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1468410	1468479	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.907;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG00140_ch_T0000128;gene_id=HG00140_ch_G0000034;Parent=HG00140_ch_T0000128;transcript_name=HG00140_ch_T0000128;gene_name=AKAP17A;ID=exon:HG00140_ch_T0000128:4;Name=AKAP17A;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1468410	1468415	.	+	0	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.907;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG00140_ch_T0000128;gene_id=HG00140_ch_G0000034;Parent=HG00140_ch_T0000128;transcript_name=HG00140_ch_T0000128;gene_name=AKAP17A;ID=CDS:HG00140_ch_T0000128:3;Name=AKAP17A;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	1468413	1468415	.	+	0	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.907;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG00140_ch_T0000128;gene_id=HG00140_ch_G0000034;Parent=HG00140_ch_T0000128;transcript_name=HG00140_ch_T0000128;gene_name=AKAP17A;ID=stop_codon:HG00140_ch_T0000128;Name=AKAP17A;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1468480	1468930	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.907;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG00140_ch_T0000128;gene_id=HG00140_ch_G0000034;Parent=HG00140_ch_T0000128;transcript_name=HG00140_ch_T0000128;gene_name=AKAP17A;ID=intron:HG00140_ch_T0000128:4;Name=AKAP17A;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1468931	1470774	.	+	.	source_transcript=ENST00000711186.1;source_transcript_name=AKAP17A-206;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711186.1;transcript_score=299.907;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711186.1,ENST00000711186.1;transcript_id=HG00140_ch_T0000128;gene_id=HG00140_ch_G0000034;Parent=HG00140_ch_T0000128;transcript_name=HG00140_ch_T0000128;gene_name=AKAP17A;ID=exon:HG00140_ch_T0000128:5;Name=AKAP17A;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1460131	1468575	100	+	.	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=HG00140_ch_T0000129;gene_id=HG00140_ch_G0000034;Parent=HG00140_ch_G0000034;transcript_name=HG00140_ch_T0000129;gene_name=AKAP17A;ID=HG00140_ch_T0000129;Name=AKAP17A
HG00140_chrY	CAT	exon	1460131	1460275	.	+	.	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=HG00140_ch_T0000129;gene_id=HG00140_ch_G0000034;Parent=HG00140_ch_T0000129;transcript_name=HG00140_ch_T0000129;gene_name=AKAP17A;ID=exon:HG00140_ch_T0000129:0;Name=AKAP17A;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1460276	1461949	.	+	.	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=HG00140_ch_T0000129;gene_id=HG00140_ch_G0000034;Parent=HG00140_ch_T0000129;transcript_name=HG00140_ch_T0000129;gene_name=AKAP17A;ID=intron:HG00140_ch_T0000129:0;Name=AKAP17A;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1461950	1462730	.	+	.	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=HG00140_ch_T0000129;gene_id=HG00140_ch_G0000034;Parent=HG00140_ch_T0000129;transcript_name=HG00140_ch_T0000129;gene_name=AKAP17A;ID=exon:HG00140_ch_T0000129:1;Name=AKAP17A;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1461969	1462730	.	+	0	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=HG00140_ch_T0000129;gene_id=HG00140_ch_G0000034;Parent=HG00140_ch_T0000129;transcript_name=HG00140_ch_T0000129;gene_name=AKAP17A;ID=CDS:HG00140_ch_T0000129:0;Name=AKAP17A;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	1461969	1461971	.	+	0	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=HG00140_ch_T0000129;gene_id=HG00140_ch_G0000034;Parent=HG00140_ch_T0000129;transcript_name=HG00140_ch_T0000129;gene_name=AKAP17A;ID=start_codon:HG00140_ch_T0000129;Name=AKAP17A;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1462731	1463861	.	+	.	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=HG00140_ch_T0000129;gene_id=HG00140_ch_G0000034;Parent=HG00140_ch_T0000129;transcript_name=HG00140_ch_T0000129;gene_name=AKAP17A;ID=intron:HG00140_ch_T0000129:1;Name=AKAP17A;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1463862	1464010	.	+	.	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=HG00140_ch_T0000129;gene_id=HG00140_ch_G0000034;Parent=HG00140_ch_T0000129;transcript_name=HG00140_ch_T0000129;gene_name=AKAP17A;ID=exon:HG00140_ch_T0000129:2;Name=AKAP17A;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1463862	1464010	.	+	0	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=HG00140_ch_T0000129;gene_id=HG00140_ch_G0000034;Parent=HG00140_ch_T0000129;transcript_name=HG00140_ch_T0000129;gene_name=AKAP17A;ID=CDS:HG00140_ch_T0000129:1;Name=AKAP17A;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1464011	1467463	.	+	.	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=HG00140_ch_T0000129;gene_id=HG00140_ch_G0000034;Parent=HG00140_ch_T0000129;transcript_name=HG00140_ch_T0000129;gene_name=AKAP17A;ID=intron:HG00140_ch_T0000129:2;Name=AKAP17A;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1467464	1468575	.	+	.	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=HG00140_ch_T0000129;gene_id=HG00140_ch_G0000034;Parent=HG00140_ch_T0000129;transcript_name=HG00140_ch_T0000129;gene_name=AKAP17A;ID=exon:HG00140_ch_T0000129:3;Name=AKAP17A;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1467464	1467893	.	+	1	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=HG00140_ch_T0000129;gene_id=HG00140_ch_G0000034;Parent=HG00140_ch_T0000129;transcript_name=HG00140_ch_T0000129;gene_name=AKAP17A;ID=CDS:HG00140_ch_T0000129:2;Name=AKAP17A;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	1467891	1467893	.	+	0	source_transcript=ENST00000711185.1;source_transcript_name=AKAP17A-205;source_gene=ENSG00000292343.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292343.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711185.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=ENST00000711185.1,ENST00000711185.1;transcript_id=HG00140_ch_T0000129;gene_id=HG00140_ch_G0000034;Parent=HG00140_ch_T0000129;transcript_name=HG00140_ch_T0000129;gene_name=AKAP17A;ID=stop_codon:HG00140_ch_T0000129;Name=AKAP17A;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	1483336	1506726	.	+	.	source_gene_common_name=ASMT;source_gene=ENSG00000292336.1;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;gene_id=HG00140_ch_G0000035;gene_biotype=protein_coding;gene_name=ASMT;gene_sources=liftoff;ID=HG00140_ch_G0000035;Name=ASMT
HG00140_chrY	CAT	transcript	1483336	1506726	100	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00140_ch_T0000130;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_G0000035;transcript_name=HG00140_ch_T0000130;gene_name=ASMT;ID=HG00140_ch_T0000130;Name=ASMT
HG00140_chrY	CAT	exon	1483336	1483545	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00140_ch_T0000130;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000130;transcript_name=HG00140_ch_T0000130;gene_name=ASMT;ID=exon:HG00140_ch_T0000130:0;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1483477	1483545	.	+	0	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00140_ch_T0000130;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000130;transcript_name=HG00140_ch_T0000130;gene_name=ASMT;ID=CDS:HG00140_ch_T0000130:0;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	1483477	1483479	.	+	0	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00140_ch_T0000130;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000130;transcript_name=HG00140_ch_T0000130;gene_name=ASMT;ID=start_codon:HG00140_ch_T0000130;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1483546	1490735	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00140_ch_T0000130;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000130;transcript_name=HG00140_ch_T0000130;gene_name=ASMT;ID=intron:HG00140_ch_T0000130:0;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1490736	1490910	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00140_ch_T0000130;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000130;transcript_name=HG00140_ch_T0000130;gene_name=ASMT;ID=exon:HG00140_ch_T0000130:1;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1490736	1490910	.	+	0	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00140_ch_T0000130;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000130;transcript_name=HG00140_ch_T0000130;gene_name=ASMT;ID=CDS:HG00140_ch_T0000130:1;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1490911	1491865	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00140_ch_T0000130;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000130;transcript_name=HG00140_ch_T0000130;gene_name=ASMT;ID=intron:HG00140_ch_T0000130:1;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1491866	1491995	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00140_ch_T0000130;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000130;transcript_name=HG00140_ch_T0000130;gene_name=ASMT;ID=exon:HG00140_ch_T0000130:2;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1491866	1491995	.	+	2	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00140_ch_T0000130;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000130;transcript_name=HG00140_ch_T0000130;gene_name=ASMT;ID=CDS:HG00140_ch_T0000130:2;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1491996	1495299	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00140_ch_T0000130;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000130;transcript_name=HG00140_ch_T0000130;gene_name=ASMT;ID=intron:HG00140_ch_T0000130:2;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1495300	1495368	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00140_ch_T0000130;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000130;transcript_name=HG00140_ch_T0000130;gene_name=ASMT;ID=exon:HG00140_ch_T0000130:3;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1495300	1495368	.	+	1	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00140_ch_T0000130;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000130;transcript_name=HG00140_ch_T0000130;gene_name=ASMT;ID=CDS:HG00140_ch_T0000130:3;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1495369	1497417	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00140_ch_T0000130;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000130;transcript_name=HG00140_ch_T0000130;gene_name=ASMT;ID=intron:HG00140_ch_T0000130:3;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1497418	1497536	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00140_ch_T0000130;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000130;transcript_name=HG00140_ch_T0000130;gene_name=ASMT;ID=exon:HG00140_ch_T0000130:4;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1497418	1497536	.	+	1	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00140_ch_T0000130;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000130;transcript_name=HG00140_ch_T0000130;gene_name=ASMT;ID=CDS:HG00140_ch_T0000130:4;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1497537	1500300	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00140_ch_T0000130;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000130;transcript_name=HG00140_ch_T0000130;gene_name=ASMT;ID=intron:HG00140_ch_T0000130:4;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1500301	1500384	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00140_ch_T0000130;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000130;transcript_name=HG00140_ch_T0000130;gene_name=ASMT;ID=exon:HG00140_ch_T0000130:5;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1500301	1500384	.	+	2	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00140_ch_T0000130;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000130;transcript_name=HG00140_ch_T0000130;gene_name=ASMT;ID=CDS:HG00140_ch_T0000130:5;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1500385	1500746	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00140_ch_T0000130;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000130;transcript_name=HG00140_ch_T0000130;gene_name=ASMT;ID=intron:HG00140_ch_T0000130:5;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1500747	1500887	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00140_ch_T0000130;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000130;transcript_name=HG00140_ch_T0000130;gene_name=ASMT;ID=exon:HG00140_ch_T0000130:6;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1500747	1500887	.	+	2	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00140_ch_T0000130;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000130;transcript_name=HG00140_ch_T0000130;gene_name=ASMT;ID=CDS:HG00140_ch_T0000130:6;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1500888	1504034	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00140_ch_T0000130;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000130;transcript_name=HG00140_ch_T0000130;gene_name=ASMT;ID=intron:HG00140_ch_T0000130:6;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1504035	1504157	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00140_ch_T0000130;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000130;transcript_name=HG00140_ch_T0000130;gene_name=ASMT;ID=exon:HG00140_ch_T0000130:7;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1504035	1504157	.	+	2	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00140_ch_T0000130;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000130;transcript_name=HG00140_ch_T0000130;gene_name=ASMT;ID=CDS:HG00140_ch_T0000130:7;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1504158	1506447	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00140_ch_T0000130;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000130;transcript_name=HG00140_ch_T0000130;gene_name=ASMT;ID=intron:HG00140_ch_T0000130:7;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1506448	1506726	.	+	.	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00140_ch_T0000130;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000130;transcript_name=HG00140_ch_T0000130;gene_name=ASMT;ID=exon:HG00140_ch_T0000130:8;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1506448	1506659	.	+	2	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00140_ch_T0000130;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000130;transcript_name=HG00140_ch_T0000130;gene_name=ASMT;ID=CDS:HG00140_ch_T0000130:8;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	1506657	1506659	.	+	0	source_transcript=ENST00000711210.1;source_transcript_name=ASMT-210;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711210.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711210.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711210.1,ENST00000711210.1;transcript_id=HG00140_ch_T0000130;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000130;transcript_name=HG00140_ch_T0000130;gene_name=ASMT;ID=stop_codon:HG00140_ch_T0000130;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1483441	1506672	100	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00140_ch_T0000131;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_G0000035;transcript_name=HG00140_ch_T0000131;gene_name=ASMT;ID=HG00140_ch_T0000131;Name=ASMT
HG00140_chrY	CAT	exon	1483441	1483545	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00140_ch_T0000131;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000131;transcript_name=HG00140_ch_T0000131;gene_name=ASMT;ID=exon:HG00140_ch_T0000131:0;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1483477	1483545	.	+	0	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00140_ch_T0000131;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000131;transcript_name=HG00140_ch_T0000131;gene_name=ASMT;ID=CDS:HG00140_ch_T0000131:0;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	1483477	1483479	.	+	0	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00140_ch_T0000131;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000131;transcript_name=HG00140_ch_T0000131;gene_name=ASMT;ID=start_codon:HG00140_ch_T0000131;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1483546	1490735	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00140_ch_T0000131;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000131;transcript_name=HG00140_ch_T0000131;gene_name=ASMT;ID=intron:HG00140_ch_T0000131:0;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1490736	1490910	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00140_ch_T0000131;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000131;transcript_name=HG00140_ch_T0000131;gene_name=ASMT;ID=exon:HG00140_ch_T0000131:1;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1490736	1490910	.	+	0	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00140_ch_T0000131;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000131;transcript_name=HG00140_ch_T0000131;gene_name=ASMT;ID=CDS:HG00140_ch_T0000131:1;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1490911	1491865	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00140_ch_T0000131;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000131;transcript_name=HG00140_ch_T0000131;gene_name=ASMT;ID=intron:HG00140_ch_T0000131:1;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1491866	1491995	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00140_ch_T0000131;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000131;transcript_name=HG00140_ch_T0000131;gene_name=ASMT;ID=exon:HG00140_ch_T0000131:2;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1491866	1491995	.	+	2	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00140_ch_T0000131;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000131;transcript_name=HG00140_ch_T0000131;gene_name=ASMT;ID=CDS:HG00140_ch_T0000131:2;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1491996	1495299	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00140_ch_T0000131;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000131;transcript_name=HG00140_ch_T0000131;gene_name=ASMT;ID=intron:HG00140_ch_T0000131:2;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1495300	1495368	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00140_ch_T0000131;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000131;transcript_name=HG00140_ch_T0000131;gene_name=ASMT;ID=exon:HG00140_ch_T0000131:3;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1495300	1495368	.	+	1	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00140_ch_T0000131;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000131;transcript_name=HG00140_ch_T0000131;gene_name=ASMT;ID=CDS:HG00140_ch_T0000131:3;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1495369	1497417	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00140_ch_T0000131;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000131;transcript_name=HG00140_ch_T0000131;gene_name=ASMT;ID=intron:HG00140_ch_T0000131:3;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1497418	1497536	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00140_ch_T0000131;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000131;transcript_name=HG00140_ch_T0000131;gene_name=ASMT;ID=exon:HG00140_ch_T0000131:4;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1497418	1497536	.	+	1	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00140_ch_T0000131;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000131;transcript_name=HG00140_ch_T0000131;gene_name=ASMT;ID=CDS:HG00140_ch_T0000131:4;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1497537	1500746	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00140_ch_T0000131;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000131;transcript_name=HG00140_ch_T0000131;gene_name=ASMT;ID=intron:HG00140_ch_T0000131:4;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1500747	1500887	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00140_ch_T0000131;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000131;transcript_name=HG00140_ch_T0000131;gene_name=ASMT;ID=exon:HG00140_ch_T0000131:5;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1500747	1500887	.	+	2	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00140_ch_T0000131;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000131;transcript_name=HG00140_ch_T0000131;gene_name=ASMT;ID=CDS:HG00140_ch_T0000131:5;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1500888	1504034	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00140_ch_T0000131;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000131;transcript_name=HG00140_ch_T0000131;gene_name=ASMT;ID=intron:HG00140_ch_T0000131:5;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1504035	1504157	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00140_ch_T0000131;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000131;transcript_name=HG00140_ch_T0000131;gene_name=ASMT;ID=exon:HG00140_ch_T0000131:6;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1504035	1504157	.	+	2	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00140_ch_T0000131;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000131;transcript_name=HG00140_ch_T0000131;gene_name=ASMT;ID=CDS:HG00140_ch_T0000131:6;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1504158	1506447	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00140_ch_T0000131;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000131;transcript_name=HG00140_ch_T0000131;gene_name=ASMT;ID=intron:HG00140_ch_T0000131:6;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1506448	1506672	.	+	.	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00140_ch_T0000131;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000131;transcript_name=HG00140_ch_T0000131;gene_name=ASMT;ID=exon:HG00140_ch_T0000131:7;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1506448	1506659	.	+	2	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00140_ch_T0000131;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000131;transcript_name=HG00140_ch_T0000131;gene_name=ASMT;ID=CDS:HG00140_ch_T0000131:7;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	1506657	1506659	.	+	0	source_transcript=ENST00000711209.1;source_transcript_name=ASMT-209;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711209.1,ENST00000711209.1;transcript_id=HG00140_ch_T0000131;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000131;transcript_name=HG00140_ch_T0000131;gene_name=ASMT;ID=stop_codon:HG00140_ch_T0000131;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1483452	1506726	100	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG00140_ch_T0000132;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_G0000035;transcript_name=HG00140_ch_T0000132;gene_name=ASMT;ID=HG00140_ch_T0000132;Name=ASMT
HG00140_chrY	CAT	exon	1483452	1483545	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG00140_ch_T0000132;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000132;transcript_name=HG00140_ch_T0000132;gene_name=ASMT;ID=exon:HG00140_ch_T0000132:0;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1483477	1483545	.	+	0	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG00140_ch_T0000132;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000132;transcript_name=HG00140_ch_T0000132;gene_name=ASMT;ID=CDS:HG00140_ch_T0000132:0;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	1483477	1483479	.	+	0	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG00140_ch_T0000132;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000132;transcript_name=HG00140_ch_T0000132;gene_name=ASMT;ID=start_codon:HG00140_ch_T0000132;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1483546	1490735	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG00140_ch_T0000132;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000132;transcript_name=HG00140_ch_T0000132;gene_name=ASMT;ID=intron:HG00140_ch_T0000132:0;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1490736	1490910	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG00140_ch_T0000132;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000132;transcript_name=HG00140_ch_T0000132;gene_name=ASMT;ID=exon:HG00140_ch_T0000132:1;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1490736	1490910	.	+	0	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG00140_ch_T0000132;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000132;transcript_name=HG00140_ch_T0000132;gene_name=ASMT;ID=CDS:HG00140_ch_T0000132:1;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1490911	1491865	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG00140_ch_T0000132;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000132;transcript_name=HG00140_ch_T0000132;gene_name=ASMT;ID=intron:HG00140_ch_T0000132:1;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1491866	1491995	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG00140_ch_T0000132;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000132;transcript_name=HG00140_ch_T0000132;gene_name=ASMT;ID=exon:HG00140_ch_T0000132:2;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1491866	1491995	.	+	2	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG00140_ch_T0000132;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000132;transcript_name=HG00140_ch_T0000132;gene_name=ASMT;ID=CDS:HG00140_ch_T0000132:2;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1491996	1495299	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG00140_ch_T0000132;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000132;transcript_name=HG00140_ch_T0000132;gene_name=ASMT;ID=intron:HG00140_ch_T0000132:2;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1495300	1495368	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG00140_ch_T0000132;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000132;transcript_name=HG00140_ch_T0000132;gene_name=ASMT;ID=exon:HG00140_ch_T0000132:3;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1495300	1495368	.	+	1	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG00140_ch_T0000132;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000132;transcript_name=HG00140_ch_T0000132;gene_name=ASMT;ID=CDS:HG00140_ch_T0000132:3;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1495369	1497417	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG00140_ch_T0000132;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000132;transcript_name=HG00140_ch_T0000132;gene_name=ASMT;ID=intron:HG00140_ch_T0000132:3;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1497418	1497536	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG00140_ch_T0000132;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000132;transcript_name=HG00140_ch_T0000132;gene_name=ASMT;ID=exon:HG00140_ch_T0000132:4;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1497418	1497536	.	+	1	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG00140_ch_T0000132;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000132;transcript_name=HG00140_ch_T0000132;gene_name=ASMT;ID=CDS:HG00140_ch_T0000132:4;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1497537	1504034	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG00140_ch_T0000132;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000132;transcript_name=HG00140_ch_T0000132;gene_name=ASMT;ID=intron:HG00140_ch_T0000132:4;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1504035	1504157	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG00140_ch_T0000132;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000132;transcript_name=HG00140_ch_T0000132;gene_name=ASMT;ID=exon:HG00140_ch_T0000132:5;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1504035	1504157	.	+	2	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG00140_ch_T0000132;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000132;transcript_name=HG00140_ch_T0000132;gene_name=ASMT;ID=CDS:HG00140_ch_T0000132:5;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1504158	1506447	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG00140_ch_T0000132;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000132;transcript_name=HG00140_ch_T0000132;gene_name=ASMT;ID=intron:HG00140_ch_T0000132:5;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1506448	1506726	.	+	.	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG00140_ch_T0000132;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000132;transcript_name=HG00140_ch_T0000132;gene_name=ASMT;ID=exon:HG00140_ch_T0000132:6;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1506448	1506659	.	+	2	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG00140_ch_T0000132;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000132;transcript_name=HG00140_ch_T0000132;gene_name=ASMT;ID=CDS:HG00140_ch_T0000132:6;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	1506657	1506659	.	+	0	source_transcript=ENST00000711208.1;source_transcript_name=ASMT-208;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711208.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711208.1,ENST00000711208.1;transcript_id=HG00140_ch_T0000132;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000132;transcript_name=HG00140_ch_T0000132;gene_name=ASMT;ID=stop_codon:HG00140_ch_T0000132;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1495343	1504060	1000	+	.	source_transcript=ENST00000711207.1;source_transcript_name=ASMT-207;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711207.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711207.1,ENST00000711207.1;transcript_id=HG00140_ch_T0000133;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_G0000035;transcript_name=HG00140_ch_T0000133;gene_name=ASMT;ID=HG00140_ch_T0000133;Name=ASMT
HG00140_chrY	CAT	exon	1495343	1495630	.	+	.	source_transcript=ENST00000711207.1;source_transcript_name=ASMT-207;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711207.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711207.1,ENST00000711207.1;transcript_id=HG00140_ch_T0000133;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000133;transcript_name=HG00140_ch_T0000133;gene_name=ASMT;ID=exon:HG00140_ch_T0000133:0;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1495631	1503838	.	+	.	source_transcript=ENST00000711207.1;source_transcript_name=ASMT-207;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711207.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711207.1,ENST00000711207.1;transcript_id=HG00140_ch_T0000133;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000133;transcript_name=HG00140_ch_T0000133;gene_name=ASMT;ID=intron:HG00140_ch_T0000133:0;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1503839	1504060	.	+	.	source_transcript=ENST00000711207.1;source_transcript_name=ASMT-207;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711207.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711207.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711207.1,ENST00000711207.1;transcript_id=HG00140_ch_T0000133;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000133;transcript_name=HG00140_ch_T0000133;gene_name=ASMT;ID=exon:HG00140_ch_T0000133:1;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1503995	1506726	100	+	.	source_transcript=ENST00000711206.1;source_transcript_name=ASMT-206;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711206.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711206.1,ENST00000711206.1;transcript_id=HG00140_ch_T0000134;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_G0000035;transcript_name=HG00140_ch_T0000134;gene_name=ASMT;ID=HG00140_ch_T0000134;Name=ASMT
HG00140_chrY	CAT	exon	1503995	1504157	.	+	.	source_transcript=ENST00000711206.1;source_transcript_name=ASMT-206;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711206.1,ENST00000711206.1;transcript_id=HG00140_ch_T0000134;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000134;transcript_name=HG00140_ch_T0000134;gene_name=ASMT;ID=exon:HG00140_ch_T0000134:0;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1503995	1504157	.	+	0	source_transcript=ENST00000711206.1;source_transcript_name=ASMT-206;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711206.1,ENST00000711206.1;transcript_id=HG00140_ch_T0000134;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000134;transcript_name=HG00140_ch_T0000134;gene_name=ASMT;ID=CDS:HG00140_ch_T0000134:0;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1504158	1506447	.	+	.	source_transcript=ENST00000711206.1;source_transcript_name=ASMT-206;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711206.1,ENST00000711206.1;transcript_id=HG00140_ch_T0000134;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000134;transcript_name=HG00140_ch_T0000134;gene_name=ASMT;ID=intron:HG00140_ch_T0000134:0;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1506448	1506726	.	+	.	source_transcript=ENST00000711206.1;source_transcript_name=ASMT-206;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711206.1,ENST00000711206.1;transcript_id=HG00140_ch_T0000134;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000134;transcript_name=HG00140_ch_T0000134;gene_name=ASMT;ID=exon:HG00140_ch_T0000134:1;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1506448	1506659	.	+	2	source_transcript=ENST00000711206.1;source_transcript_name=ASMT-206;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711206.1,ENST00000711206.1;transcript_id=HG00140_ch_T0000134;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000134;transcript_name=HG00140_ch_T0000134;gene_name=ASMT;ID=CDS:HG00140_ch_T0000134:1;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	1506657	1506659	.	+	0	source_transcript=ENST00000711206.1;source_transcript_name=ASMT-206;source_gene=ENSG00000292336.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292336.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=ENST00000711206.1,ENST00000711206.1;transcript_id=HG00140_ch_T0000134;gene_id=HG00140_ch_G0000035;Parent=HG00140_ch_T0000134;transcript_name=HG00140_ch_T0000134;gene_name=ASMT;ID=stop_codon:HG00140_ch_T0000134;Name=ASMT;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	1521587	1628289	.	+	.	source_gene_common_name=LINC02968;source_gene=ENSG00000310540.2;alternative_source_transcripts=ENST00000850741.1,ENST00000850741.1;gene_id=HG00140_ch_G0000036;gene_biotype=lncRNA;gene_name=LINC02968;gene_sources=liftoff;ID=HG00140_ch_G0000036;Name=LINC02968
HG00140_chrY	CAT	transcript	1521587	1595657	1000	+	.	source_transcript=ENST00000850741.1;source_transcript_name=LINC02968-237;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850741.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850741.1,ENST00000850741.1;transcript_id=HG00140_ch_T0000135;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_G0000036;transcript_name=HG00140_ch_T0000135;gene_name=LINC02968;ID=HG00140_ch_T0000135;Name=LINC02968
HG00140_chrY	CAT	exon	1521587	1521723	.	+	.	source_transcript=ENST00000850741.1;source_transcript_name=LINC02968-237;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850741.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850741.1,ENST00000850741.1;transcript_id=HG00140_ch_T0000135;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000135;transcript_name=HG00140_ch_T0000135;gene_name=LINC02968;ID=exon:HG00140_ch_T0000135:0;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1521724	1590674	.	+	.	source_transcript=ENST00000850741.1;source_transcript_name=LINC02968-237;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850741.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850741.1,ENST00000850741.1;transcript_id=HG00140_ch_T0000135;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000135;transcript_name=HG00140_ch_T0000135;gene_name=LINC02968;ID=intron:HG00140_ch_T0000135:0;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1590675	1590762	.	+	.	source_transcript=ENST00000850741.1;source_transcript_name=LINC02968-237;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850741.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850741.1,ENST00000850741.1;transcript_id=HG00140_ch_T0000135;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000135;transcript_name=HG00140_ch_T0000135;gene_name=LINC02968;ID=exon:HG00140_ch_T0000135:1;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1590763	1595491	.	+	.	source_transcript=ENST00000850741.1;source_transcript_name=LINC02968-237;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850741.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850741.1,ENST00000850741.1;transcript_id=HG00140_ch_T0000135;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000135;transcript_name=HG00140_ch_T0000135;gene_name=LINC02968;ID=intron:HG00140_ch_T0000135:1;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1595492	1595657	.	+	.	source_transcript=ENST00000850741.1;source_transcript_name=LINC02968-237;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850741.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850741.1,ENST00000850741.1;transcript_id=HG00140_ch_T0000135;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000135;transcript_name=HG00140_ch_T0000135;gene_name=LINC02968;ID=exon:HG00140_ch_T0000135:2;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1521592	1616463	1000	+	.	source_transcript=ENST00000850739.1;source_transcript_name=LINC02968-235;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850739.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850739.1,ENST00000850739.1;transcript_id=HG00140_ch_T0000136;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_G0000036;transcript_name=HG00140_ch_T0000136;gene_name=LINC02968;ID=HG00140_ch_T0000136;Name=LINC02968
HG00140_chrY	CAT	exon	1521592	1521723	.	+	.	source_transcript=ENST00000850739.1;source_transcript_name=LINC02968-235;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850739.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850739.1,ENST00000850739.1;transcript_id=HG00140_ch_T0000136;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000136;transcript_name=HG00140_ch_T0000136;gene_name=LINC02968;ID=exon:HG00140_ch_T0000136:0;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1521724	1590674	.	+	.	source_transcript=ENST00000850739.1;source_transcript_name=LINC02968-235;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850739.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850739.1,ENST00000850739.1;transcript_id=HG00140_ch_T0000136;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000136;transcript_name=HG00140_ch_T0000136;gene_name=LINC02968;ID=intron:HG00140_ch_T0000136:0;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1590675	1590762	.	+	.	source_transcript=ENST00000850739.1;source_transcript_name=LINC02968-235;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850739.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850739.1,ENST00000850739.1;transcript_id=HG00140_ch_T0000136;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000136;transcript_name=HG00140_ch_T0000136;gene_name=LINC02968;ID=exon:HG00140_ch_T0000136:1;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1590763	1616271	.	+	.	source_transcript=ENST00000850739.1;source_transcript_name=LINC02968-235;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850739.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850739.1,ENST00000850739.1;transcript_id=HG00140_ch_T0000136;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000136;transcript_name=HG00140_ch_T0000136;gene_name=LINC02968;ID=intron:HG00140_ch_T0000136:1;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1616272	1616463	.	+	.	source_transcript=ENST00000850739.1;source_transcript_name=LINC02968-235;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850739.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850739.1,ENST00000850739.1;transcript_id=HG00140_ch_T0000136;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000136;transcript_name=HG00140_ch_T0000136;gene_name=LINC02968;ID=exon:HG00140_ch_T0000136:2;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1521592	1522290	1000	+	.	source_transcript=ENST00000850749.1;source_transcript_name=LINC02968-245;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850749.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850749.1;transcript_score=199.285;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850749.1,ENST00000850749.1;transcript_id=HG00140_ch_T0000137;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_G0000036;transcript_name=HG00140_ch_T0000137;gene_name=LINC02968;ID=HG00140_ch_T0000137;Name=LINC02968
HG00140_chrY	CAT	exon	1521592	1522290	.	+	.	source_transcript=ENST00000850749.1;source_transcript_name=LINC02968-245;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850749.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850749.1;transcript_score=199.285;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850749.1,ENST00000850749.1;transcript_id=HG00140_ch_T0000137;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000137;transcript_name=HG00140_ch_T0000137;gene_name=LINC02968;ID=exon:HG00140_ch_T0000137:0;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1521594	1524746	1000	+	.	source_transcript=ENST00000850681.1;source_transcript_name=LINC02968-226;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850681.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850681.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850681.1,ENST00000850681.1;transcript_id=HG00140_ch_T0000138;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_G0000036;transcript_name=HG00140_ch_T0000138;gene_name=LINC02968;ID=HG00140_ch_T0000138;Name=LINC02968
HG00140_chrY	CAT	exon	1521594	1521723	.	+	.	source_transcript=ENST00000850681.1;source_transcript_name=LINC02968-226;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850681.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850681.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850681.1,ENST00000850681.1;transcript_id=HG00140_ch_T0000138;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000138;transcript_name=HG00140_ch_T0000138;gene_name=LINC02968;ID=exon:HG00140_ch_T0000138:0;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1521724	1523999	.	+	.	source_transcript=ENST00000850681.1;source_transcript_name=LINC02968-226;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850681.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850681.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850681.1,ENST00000850681.1;transcript_id=HG00140_ch_T0000138;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000138;transcript_name=HG00140_ch_T0000138;gene_name=LINC02968;ID=intron:HG00140_ch_T0000138:0;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1524000	1524746	.	+	.	source_transcript=ENST00000850681.1;source_transcript_name=LINC02968-226;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850681.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850681.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850681.1,ENST00000850681.1;transcript_id=HG00140_ch_T0000138;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000138;transcript_name=HG00140_ch_T0000138;gene_name=LINC02968;ID=exon:HG00140_ch_T0000138:1;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1521595	1524743	1000	+	.	source_transcript=ENST00000850680.1;source_transcript_name=LINC02968-225;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850680.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850680.1,ENST00000850680.1;transcript_id=HG00140_ch_T0000139;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_G0000036;transcript_name=HG00140_ch_T0000139;gene_name=LINC02968;ID=HG00140_ch_T0000139;Name=LINC02968
HG00140_chrY	CAT	exon	1521595	1521723	.	+	.	source_transcript=ENST00000850680.1;source_transcript_name=LINC02968-225;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850680.1,ENST00000850680.1;transcript_id=HG00140_ch_T0000139;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000139;transcript_name=HG00140_ch_T0000139;gene_name=LINC02968;ID=exon:HG00140_ch_T0000139:0;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1521724	1524108	.	+	.	source_transcript=ENST00000850680.1;source_transcript_name=LINC02968-225;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850680.1,ENST00000850680.1;transcript_id=HG00140_ch_T0000139;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000139;transcript_name=HG00140_ch_T0000139;gene_name=LINC02968;ID=intron:HG00140_ch_T0000139:0;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1524109	1524743	.	+	.	source_transcript=ENST00000850680.1;source_transcript_name=LINC02968-225;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850680.1,ENST00000850680.1;transcript_id=HG00140_ch_T0000139;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000139;transcript_name=HG00140_ch_T0000139;gene_name=LINC02968;ID=exon:HG00140_ch_T0000139:1;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1521597	1620835	1000	+	.	source_transcript=ENST00000850737.1;source_transcript_name=LINC02968-233;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850737.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850737.1,ENST00000850737.1;transcript_id=HG00140_ch_T0000140;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_G0000036;transcript_name=HG00140_ch_T0000140;gene_name=LINC02968;ID=HG00140_ch_T0000140;Name=LINC02968
HG00140_chrY	CAT	exon	1521597	1521723	.	+	.	source_transcript=ENST00000850737.1;source_transcript_name=LINC02968-233;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850737.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850737.1,ENST00000850737.1;transcript_id=HG00140_ch_T0000140;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000140;transcript_name=HG00140_ch_T0000140;gene_name=LINC02968;ID=exon:HG00140_ch_T0000140:0;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1521724	1590674	.	+	.	source_transcript=ENST00000850737.1;source_transcript_name=LINC02968-233;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850737.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850737.1,ENST00000850737.1;transcript_id=HG00140_ch_T0000140;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000140;transcript_name=HG00140_ch_T0000140;gene_name=LINC02968;ID=intron:HG00140_ch_T0000140:0;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1590675	1590762	.	+	.	source_transcript=ENST00000850737.1;source_transcript_name=LINC02968-233;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850737.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850737.1,ENST00000850737.1;transcript_id=HG00140_ch_T0000140;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000140;transcript_name=HG00140_ch_T0000140;gene_name=LINC02968;ID=exon:HG00140_ch_T0000140:1;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1590763	1616271	.	+	.	source_transcript=ENST00000850737.1;source_transcript_name=LINC02968-233;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850737.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850737.1,ENST00000850737.1;transcript_id=HG00140_ch_T0000140;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000140;transcript_name=HG00140_ch_T0000140;gene_name=LINC02968;ID=intron:HG00140_ch_T0000140:1;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1616272	1616331	.	+	.	source_transcript=ENST00000850737.1;source_transcript_name=LINC02968-233;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850737.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850737.1,ENST00000850737.1;transcript_id=HG00140_ch_T0000140;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000140;transcript_name=HG00140_ch_T0000140;gene_name=LINC02968;ID=exon:HG00140_ch_T0000140:2;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1616332	1620670	.	+	.	source_transcript=ENST00000850737.1;source_transcript_name=LINC02968-233;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850737.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850737.1,ENST00000850737.1;transcript_id=HG00140_ch_T0000140;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000140;transcript_name=HG00140_ch_T0000140;gene_name=LINC02968;ID=intron:HG00140_ch_T0000140:2;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1620671	1620835	.	+	.	source_transcript=ENST00000850737.1;source_transcript_name=LINC02968-233;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850737.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850737.1,ENST00000850737.1;transcript_id=HG00140_ch_T0000140;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000140;transcript_name=HG00140_ch_T0000140;gene_name=LINC02968;ID=exon:HG00140_ch_T0000140:3;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1521598	1526158	1000	+	.	source_transcript=ENST00000850746.1;source_transcript_name=LINC02968-242;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850746.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850746.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850746.1,ENST00000850746.1;transcript_id=HG00140_ch_T0000141;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_G0000036;transcript_name=HG00140_ch_T0000141;gene_name=LINC02968;ID=HG00140_ch_T0000141;Name=LINC02968
HG00140_chrY	CAT	exon	1521598	1521723	.	+	.	source_transcript=ENST00000850746.1;source_transcript_name=LINC02968-242;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850746.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850746.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850746.1,ENST00000850746.1;transcript_id=HG00140_ch_T0000141;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000141;transcript_name=HG00140_ch_T0000141;gene_name=LINC02968;ID=exon:HG00140_ch_T0000141:0;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1521724	1526012	.	+	.	source_transcript=ENST00000850746.1;source_transcript_name=LINC02968-242;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850746.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850746.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850746.1,ENST00000850746.1;transcript_id=HG00140_ch_T0000141;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000141;transcript_name=HG00140_ch_T0000141;gene_name=LINC02968;ID=intron:HG00140_ch_T0000141:0;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1526013	1526158	.	+	.	source_transcript=ENST00000850746.1;source_transcript_name=LINC02968-242;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850746.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850746.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850746.1,ENST00000850746.1;transcript_id=HG00140_ch_T0000141;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000141;transcript_name=HG00140_ch_T0000141;gene_name=LINC02968;ID=exon:HG00140_ch_T0000141:1;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1521612	1524718	1000	+	.	source_transcript=ENST00000850747.1;source_transcript_name=LINC02968-243;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850747.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850747.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850747.1,ENST00000850747.1;transcript_id=HG00140_ch_T0000142;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_G0000036;transcript_name=HG00140_ch_T0000142;gene_name=LINC02968;ID=HG00140_ch_T0000142;Name=LINC02968
HG00140_chrY	CAT	exon	1521612	1521723	.	+	.	source_transcript=ENST00000850747.1;source_transcript_name=LINC02968-243;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850747.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850747.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850747.1,ENST00000850747.1;transcript_id=HG00140_ch_T0000142;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000142;transcript_name=HG00140_ch_T0000142;gene_name=LINC02968;ID=exon:HG00140_ch_T0000142:0;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1521724	1524111	.	+	.	source_transcript=ENST00000850747.1;source_transcript_name=LINC02968-243;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850747.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850747.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850747.1,ENST00000850747.1;transcript_id=HG00140_ch_T0000142;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000142;transcript_name=HG00140_ch_T0000142;gene_name=LINC02968;ID=intron:HG00140_ch_T0000142:0;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1524112	1524718	.	+	.	source_transcript=ENST00000850747.1;source_transcript_name=LINC02968-243;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850747.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850747.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850747.1,ENST00000850747.1;transcript_id=HG00140_ch_T0000142;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000142;transcript_name=HG00140_ch_T0000142;gene_name=LINC02968;ID=exon:HG00140_ch_T0000142:1;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1521614	1541237	1000	+	.	source_transcript=ENST00000850682.1;source_transcript_name=LINC02968-227;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850682.1;transcript_score=299.758;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850682.1,ENST00000850682.1;transcript_id=HG00140_ch_T0000143;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_G0000036;transcript_name=HG00140_ch_T0000143;gene_name=LINC02968;ID=HG00140_ch_T0000143;Name=LINC02968
HG00140_chrY	CAT	exon	1521614	1521723	.	+	.	source_transcript=ENST00000850682.1;source_transcript_name=LINC02968-227;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850682.1;transcript_score=299.758;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850682.1,ENST00000850682.1;transcript_id=HG00140_ch_T0000143;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000143;transcript_name=HG00140_ch_T0000143;gene_name=LINC02968;ID=exon:HG00140_ch_T0000143:0;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1521724	1526012	.	+	.	source_transcript=ENST00000850682.1;source_transcript_name=LINC02968-227;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850682.1;transcript_score=299.758;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850682.1,ENST00000850682.1;transcript_id=HG00140_ch_T0000143;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000143;transcript_name=HG00140_ch_T0000143;gene_name=LINC02968;ID=intron:HG00140_ch_T0000143:0;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1526013	1526123	.	+	.	source_transcript=ENST00000850682.1;source_transcript_name=LINC02968-227;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850682.1;transcript_score=299.758;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850682.1,ENST00000850682.1;transcript_id=HG00140_ch_T0000143;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000143;transcript_name=HG00140_ch_T0000143;gene_name=LINC02968;ID=exon:HG00140_ch_T0000143:1;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1526124	1541044	.	+	.	source_transcript=ENST00000850682.1;source_transcript_name=LINC02968-227;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850682.1;transcript_score=299.758;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850682.1,ENST00000850682.1;transcript_id=HG00140_ch_T0000143;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000143;transcript_name=HG00140_ch_T0000143;gene_name=LINC02968;ID=intron:HG00140_ch_T0000143:1;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1541045	1541237	.	+	.	source_transcript=ENST00000850682.1;source_transcript_name=LINC02968-227;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850682.1;transcript_score=299.758;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850682.1,ENST00000850682.1;transcript_id=HG00140_ch_T0000143;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000143;transcript_name=HG00140_ch_T0000143;gene_name=LINC02968;ID=exon:HG00140_ch_T0000143:2;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1521614	1526319	1000	+	.	source_transcript=ENST00000850684.1;source_transcript_name=LINC02968-229;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850684.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850684.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850684.1,ENST00000850684.1;transcript_id=HG00140_ch_T0000144;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_G0000036;transcript_name=HG00140_ch_T0000144;gene_name=LINC02968;ID=HG00140_ch_T0000144;Name=LINC02968
HG00140_chrY	CAT	exon	1521614	1521723	.	+	.	source_transcript=ENST00000850684.1;source_transcript_name=LINC02968-229;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850684.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850684.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850684.1,ENST00000850684.1;transcript_id=HG00140_ch_T0000144;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000144;transcript_name=HG00140_ch_T0000144;gene_name=LINC02968;ID=exon:HG00140_ch_T0000144:0;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1521724	1525581	.	+	.	source_transcript=ENST00000850684.1;source_transcript_name=LINC02968-229;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850684.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850684.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850684.1,ENST00000850684.1;transcript_id=HG00140_ch_T0000144;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000144;transcript_name=HG00140_ch_T0000144;gene_name=LINC02968;ID=intron:HG00140_ch_T0000144:0;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1525582	1525904	.	+	.	source_transcript=ENST00000850684.1;source_transcript_name=LINC02968-229;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850684.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850684.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850684.1,ENST00000850684.1;transcript_id=HG00140_ch_T0000144;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000144;transcript_name=HG00140_ch_T0000144;gene_name=LINC02968;ID=exon:HG00140_ch_T0000144:1;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1525905	1526012	.	+	.	source_transcript=ENST00000850684.1;source_transcript_name=LINC02968-229;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850684.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850684.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850684.1,ENST00000850684.1;transcript_id=HG00140_ch_T0000144;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000144;transcript_name=HG00140_ch_T0000144;gene_name=LINC02968;ID=intron:HG00140_ch_T0000144:1;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1526013	1526319	.	+	.	source_transcript=ENST00000850684.1;source_transcript_name=LINC02968-229;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850684.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850684.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850684.1,ENST00000850684.1;transcript_id=HG00140_ch_T0000144;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000144;transcript_name=HG00140_ch_T0000144;gene_name=LINC02968;ID=exon:HG00140_ch_T0000144:2;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1521628	1528318	1000	+	.	source_transcript=ENST00000850683.1;source_transcript_name=LINC02968-228;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850683.1;transcript_score=299.8;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850683.1,ENST00000850683.1;transcript_id=HG00140_ch_T0000145;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_G0000036;transcript_name=HG00140_ch_T0000145;gene_name=LINC02968;ID=HG00140_ch_T0000145;Name=LINC02968
HG00140_chrY	CAT	exon	1521628	1521723	.	+	.	source_transcript=ENST00000850683.1;source_transcript_name=LINC02968-228;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850683.1;transcript_score=299.8;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850683.1,ENST00000850683.1;transcript_id=HG00140_ch_T0000145;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000145;transcript_name=HG00140_ch_T0000145;gene_name=LINC02968;ID=exon:HG00140_ch_T0000145:0;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1521724	1526012	.	+	.	source_transcript=ENST00000850683.1;source_transcript_name=LINC02968-228;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850683.1;transcript_score=299.8;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850683.1,ENST00000850683.1;transcript_id=HG00140_ch_T0000145;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000145;transcript_name=HG00140_ch_T0000145;gene_name=LINC02968;ID=intron:HG00140_ch_T0000145:0;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1526013	1526123	.	+	.	source_transcript=ENST00000850683.1;source_transcript_name=LINC02968-228;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850683.1;transcript_score=299.8;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850683.1,ENST00000850683.1;transcript_id=HG00140_ch_T0000145;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000145;transcript_name=HG00140_ch_T0000145;gene_name=LINC02968;ID=exon:HG00140_ch_T0000145:1;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1526124	1528024	.	+	.	source_transcript=ENST00000850683.1;source_transcript_name=LINC02968-228;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850683.1;transcript_score=299.8;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850683.1,ENST00000850683.1;transcript_id=HG00140_ch_T0000145;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000145;transcript_name=HG00140_ch_T0000145;gene_name=LINC02968;ID=intron:HG00140_ch_T0000145:1;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1528025	1528318	.	+	.	source_transcript=ENST00000850683.1;source_transcript_name=LINC02968-228;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850683.1;transcript_score=299.8;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850683.1,ENST00000850683.1;transcript_id=HG00140_ch_T0000145;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000145;transcript_name=HG00140_ch_T0000145;gene_name=LINC02968;ID=exon:HG00140_ch_T0000145:2;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1521655	1628289	1000	+	.	source_transcript=ENST00000850685.1;source_transcript_name=LINC02968-230;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850685.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850685.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850685.1,ENST00000850685.1;transcript_id=HG00140_ch_T0000146;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_G0000036;transcript_name=HG00140_ch_T0000146;gene_name=LINC02968;ID=HG00140_ch_T0000146;Name=LINC02968
HG00140_chrY	CAT	exon	1521655	1521723	.	+	.	source_transcript=ENST00000850685.1;source_transcript_name=LINC02968-230;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850685.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850685.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850685.1,ENST00000850685.1;transcript_id=HG00140_ch_T0000146;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000146;transcript_name=HG00140_ch_T0000146;gene_name=LINC02968;ID=exon:HG00140_ch_T0000146:0;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1521724	1590674	.	+	.	source_transcript=ENST00000850685.1;source_transcript_name=LINC02968-230;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850685.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850685.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850685.1,ENST00000850685.1;transcript_id=HG00140_ch_T0000146;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000146;transcript_name=HG00140_ch_T0000146;gene_name=LINC02968;ID=intron:HG00140_ch_T0000146:0;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1590675	1590762	.	+	.	source_transcript=ENST00000850685.1;source_transcript_name=LINC02968-230;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850685.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850685.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850685.1,ENST00000850685.1;transcript_id=HG00140_ch_T0000146;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000146;transcript_name=HG00140_ch_T0000146;gene_name=LINC02968;ID=exon:HG00140_ch_T0000146:1;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1590763	1620670	.	+	.	source_transcript=ENST00000850685.1;source_transcript_name=LINC02968-230;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850685.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850685.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850685.1,ENST00000850685.1;transcript_id=HG00140_ch_T0000146;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000146;transcript_name=HG00140_ch_T0000146;gene_name=LINC02968;ID=intron:HG00140_ch_T0000146:1;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1620671	1620972	.	+	.	source_transcript=ENST00000850685.1;source_transcript_name=LINC02968-230;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850685.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850685.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850685.1,ENST00000850685.1;transcript_id=HG00140_ch_T0000146;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000146;transcript_name=HG00140_ch_T0000146;gene_name=LINC02968;ID=exon:HG00140_ch_T0000146:2;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1620973	1627935	.	+	.	source_transcript=ENST00000850685.1;source_transcript_name=LINC02968-230;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850685.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850685.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850685.1,ENST00000850685.1;transcript_id=HG00140_ch_T0000146;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000146;transcript_name=HG00140_ch_T0000146;gene_name=LINC02968;ID=intron:HG00140_ch_T0000146:2;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1627936	1628289	.	+	.	source_transcript=ENST00000850685.1;source_transcript_name=LINC02968-230;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850685.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850685.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850685.1,ENST00000850685.1;transcript_id=HG00140_ch_T0000146;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000146;transcript_name=HG00140_ch_T0000146;gene_name=LINC02968;ID=exon:HG00140_ch_T0000146:3;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1525647	1595658	1000	+	.	source_transcript=ENST00000850686.1;source_transcript_name=LINC02968-231;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850686.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850686.1,ENST00000850686.1;transcript_id=HG00140_ch_T0000147;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_G0000036;transcript_name=HG00140_ch_T0000147;gene_name=LINC02968;ID=HG00140_ch_T0000147;Name=LINC02968
HG00140_chrY	CAT	exon	1525647	1525904	.	+	.	source_transcript=ENST00000850686.1;source_transcript_name=LINC02968-231;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850686.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850686.1,ENST00000850686.1;transcript_id=HG00140_ch_T0000147;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000147;transcript_name=HG00140_ch_T0000147;gene_name=LINC02968;ID=exon:HG00140_ch_T0000147:0;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1525905	1590674	.	+	.	source_transcript=ENST00000850686.1;source_transcript_name=LINC02968-231;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850686.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850686.1,ENST00000850686.1;transcript_id=HG00140_ch_T0000147;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000147;transcript_name=HG00140_ch_T0000147;gene_name=LINC02968;ID=intron:HG00140_ch_T0000147:0;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1590675	1590762	.	+	.	source_transcript=ENST00000850686.1;source_transcript_name=LINC02968-231;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850686.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850686.1,ENST00000850686.1;transcript_id=HG00140_ch_T0000147;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000147;transcript_name=HG00140_ch_T0000147;gene_name=LINC02968;ID=exon:HG00140_ch_T0000147:1;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1590763	1595491	.	+	.	source_transcript=ENST00000850686.1;source_transcript_name=LINC02968-231;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850686.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850686.1,ENST00000850686.1;transcript_id=HG00140_ch_T0000147;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000147;transcript_name=HG00140_ch_T0000147;gene_name=LINC02968;ID=intron:HG00140_ch_T0000147:1;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1595492	1595658	.	+	.	source_transcript=ENST00000850686.1;source_transcript_name=LINC02968-231;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850686.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850686.1,ENST00000850686.1;transcript_id=HG00140_ch_T0000147;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000147;transcript_name=HG00140_ch_T0000147;gene_name=LINC02968;ID=exon:HG00140_ch_T0000147:2;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1525647	1595656	1000	+	.	source_transcript=ENST00000850742.1;source_transcript_name=LINC02968-238;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850742.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850742.1,ENST00000850742.1;transcript_id=HG00140_ch_T0000148;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_G0000036;transcript_name=HG00140_ch_T0000148;gene_name=LINC02968;ID=HG00140_ch_T0000148;Name=LINC02968
HG00140_chrY	CAT	exon	1525647	1525904	.	+	.	source_transcript=ENST00000850742.1;source_transcript_name=LINC02968-238;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850742.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850742.1,ENST00000850742.1;transcript_id=HG00140_ch_T0000148;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000148;transcript_name=HG00140_ch_T0000148;gene_name=LINC02968;ID=exon:HG00140_ch_T0000148:0;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1525905	1590674	.	+	.	source_transcript=ENST00000850742.1;source_transcript_name=LINC02968-238;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850742.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850742.1,ENST00000850742.1;transcript_id=HG00140_ch_T0000148;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000148;transcript_name=HG00140_ch_T0000148;gene_name=LINC02968;ID=intron:HG00140_ch_T0000148:0;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1590675	1590762	.	+	.	source_transcript=ENST00000850742.1;source_transcript_name=LINC02968-238;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850742.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850742.1,ENST00000850742.1;transcript_id=HG00140_ch_T0000148;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000148;transcript_name=HG00140_ch_T0000148;gene_name=LINC02968;ID=exon:HG00140_ch_T0000148:1;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1590763	1590925	.	+	.	source_transcript=ENST00000850742.1;source_transcript_name=LINC02968-238;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850742.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850742.1,ENST00000850742.1;transcript_id=HG00140_ch_T0000148;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000148;transcript_name=HG00140_ch_T0000148;gene_name=LINC02968;ID=intron:HG00140_ch_T0000148:1;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1590926	1591098	.	+	.	source_transcript=ENST00000850742.1;source_transcript_name=LINC02968-238;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850742.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850742.1,ENST00000850742.1;transcript_id=HG00140_ch_T0000148;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000148;transcript_name=HG00140_ch_T0000148;gene_name=LINC02968;ID=exon:HG00140_ch_T0000148:2;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1591099	1595491	.	+	.	source_transcript=ENST00000850742.1;source_transcript_name=LINC02968-238;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850742.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850742.1,ENST00000850742.1;transcript_id=HG00140_ch_T0000148;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000148;transcript_name=HG00140_ch_T0000148;gene_name=LINC02968;ID=intron:HG00140_ch_T0000148:2;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1595492	1595656	.	+	.	source_transcript=ENST00000850742.1;source_transcript_name=LINC02968-238;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850742.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850742.1,ENST00000850742.1;transcript_id=HG00140_ch_T0000148;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000148;transcript_name=HG00140_ch_T0000148;gene_name=LINC02968;ID=exon:HG00140_ch_T0000148:3;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1525647	1526158	1000	+	.	source_transcript=ENST00000850839.1;source_transcript_name=LINC02968-248;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850839.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850839.1,ENST00000850839.1;transcript_id=HG00140_ch_T0000149;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_G0000036;transcript_name=HG00140_ch_T0000149;gene_name=LINC02968;ID=HG00140_ch_T0000149;Name=LINC02968
HG00140_chrY	CAT	exon	1525647	1525904	.	+	.	source_transcript=ENST00000850839.1;source_transcript_name=LINC02968-248;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850839.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850839.1,ENST00000850839.1;transcript_id=HG00140_ch_T0000149;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000149;transcript_name=HG00140_ch_T0000149;gene_name=LINC02968;ID=exon:HG00140_ch_T0000149:0;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1525905	1526012	.	+	.	source_transcript=ENST00000850839.1;source_transcript_name=LINC02968-248;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850839.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850839.1,ENST00000850839.1;transcript_id=HG00140_ch_T0000149;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000149;transcript_name=HG00140_ch_T0000149;gene_name=LINC02968;ID=intron:HG00140_ch_T0000149:0;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1526013	1526158	.	+	.	source_transcript=ENST00000850839.1;source_transcript_name=LINC02968-248;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850839.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850839.1,ENST00000850839.1;transcript_id=HG00140_ch_T0000149;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000149;transcript_name=HG00140_ch_T0000149;gene_name=LINC02968;ID=exon:HG00140_ch_T0000149:1;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1525658	1591139	1000	+	.	source_transcript=ENST00000850744.1;source_transcript_name=LINC02968-240;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850744.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850744.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850744.1,ENST00000850744.1;transcript_id=HG00140_ch_T0000150;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_G0000036;transcript_name=HG00140_ch_T0000150;gene_name=LINC02968;ID=HG00140_ch_T0000150;Name=LINC02968
HG00140_chrY	CAT	exon	1525658	1525904	.	+	.	source_transcript=ENST00000850744.1;source_transcript_name=LINC02968-240;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850744.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850744.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850744.1,ENST00000850744.1;transcript_id=HG00140_ch_T0000150;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000150;transcript_name=HG00140_ch_T0000150;gene_name=LINC02968;ID=exon:HG00140_ch_T0000150:0;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1525905	1590674	.	+	.	source_transcript=ENST00000850744.1;source_transcript_name=LINC02968-240;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850744.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850744.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850744.1,ENST00000850744.1;transcript_id=HG00140_ch_T0000150;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000150;transcript_name=HG00140_ch_T0000150;gene_name=LINC02968;ID=intron:HG00140_ch_T0000150:0;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1590675	1590762	.	+	.	source_transcript=ENST00000850744.1;source_transcript_name=LINC02968-240;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850744.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850744.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850744.1,ENST00000850744.1;transcript_id=HG00140_ch_T0000150;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000150;transcript_name=HG00140_ch_T0000150;gene_name=LINC02968;ID=exon:HG00140_ch_T0000150:1;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1590763	1590925	.	+	.	source_transcript=ENST00000850744.1;source_transcript_name=LINC02968-240;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850744.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850744.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850744.1,ENST00000850744.1;transcript_id=HG00140_ch_T0000150;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000150;transcript_name=HG00140_ch_T0000150;gene_name=LINC02968;ID=intron:HG00140_ch_T0000150:1;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1590926	1591139	.	+	.	source_transcript=ENST00000850744.1;source_transcript_name=LINC02968-240;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850744.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850744.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850744.1,ENST00000850744.1;transcript_id=HG00140_ch_T0000150;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000150;transcript_name=HG00140_ch_T0000150;gene_name=LINC02968;ID=exon:HG00140_ch_T0000150:2;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1525675	1616462	1000	+	.	source_transcript=ENST00000850740.1;source_transcript_name=LINC02968-236;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850740.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850740.1,ENST00000850740.1;transcript_id=HG00140_ch_T0000151;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_G0000036;transcript_name=HG00140_ch_T0000151;gene_name=LINC02968;ID=HG00140_ch_T0000151;Name=LINC02968
HG00140_chrY	CAT	exon	1525675	1525904	.	+	.	source_transcript=ENST00000850740.1;source_transcript_name=LINC02968-236;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850740.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850740.1,ENST00000850740.1;transcript_id=HG00140_ch_T0000151;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000151;transcript_name=HG00140_ch_T0000151;gene_name=LINC02968;ID=exon:HG00140_ch_T0000151:0;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1525905	1590674	.	+	.	source_transcript=ENST00000850740.1;source_transcript_name=LINC02968-236;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850740.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850740.1,ENST00000850740.1;transcript_id=HG00140_ch_T0000151;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000151;transcript_name=HG00140_ch_T0000151;gene_name=LINC02968;ID=intron:HG00140_ch_T0000151:0;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1590675	1590762	.	+	.	source_transcript=ENST00000850740.1;source_transcript_name=LINC02968-236;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850740.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850740.1,ENST00000850740.1;transcript_id=HG00140_ch_T0000151;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000151;transcript_name=HG00140_ch_T0000151;gene_name=LINC02968;ID=exon:HG00140_ch_T0000151:1;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1590763	1616271	.	+	.	source_transcript=ENST00000850740.1;source_transcript_name=LINC02968-236;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850740.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850740.1,ENST00000850740.1;transcript_id=HG00140_ch_T0000151;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000151;transcript_name=HG00140_ch_T0000151;gene_name=LINC02968;ID=intron:HG00140_ch_T0000151:1;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1616272	1616462	.	+	.	source_transcript=ENST00000850740.1;source_transcript_name=LINC02968-236;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850740.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850740.1,ENST00000850740.1;transcript_id=HG00140_ch_T0000151;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000151;transcript_name=HG00140_ch_T0000151;gene_name=LINC02968;ID=exon:HG00140_ch_T0000151:2;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1525698	1620917	1000	+	.	source_transcript=ENST00000850738.1;source_transcript_name=LINC02968-234;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850738.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850738.1,ENST00000850738.1;transcript_id=HG00140_ch_T0000152;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_G0000036;transcript_name=HG00140_ch_T0000152;gene_name=LINC02968;ID=HG00140_ch_T0000152;Name=LINC02968
HG00140_chrY	CAT	exon	1525698	1525904	.	+	.	source_transcript=ENST00000850738.1;source_transcript_name=LINC02968-234;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850738.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850738.1,ENST00000850738.1;transcript_id=HG00140_ch_T0000152;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000152;transcript_name=HG00140_ch_T0000152;gene_name=LINC02968;ID=exon:HG00140_ch_T0000152:0;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1525905	1590674	.	+	.	source_transcript=ENST00000850738.1;source_transcript_name=LINC02968-234;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850738.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850738.1,ENST00000850738.1;transcript_id=HG00140_ch_T0000152;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000152;transcript_name=HG00140_ch_T0000152;gene_name=LINC02968;ID=intron:HG00140_ch_T0000152:0;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1590675	1590762	.	+	.	source_transcript=ENST00000850738.1;source_transcript_name=LINC02968-234;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850738.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850738.1,ENST00000850738.1;transcript_id=HG00140_ch_T0000152;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000152;transcript_name=HG00140_ch_T0000152;gene_name=LINC02968;ID=exon:HG00140_ch_T0000152:1;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1590763	1616271	.	+	.	source_transcript=ENST00000850738.1;source_transcript_name=LINC02968-234;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850738.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850738.1,ENST00000850738.1;transcript_id=HG00140_ch_T0000152;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000152;transcript_name=HG00140_ch_T0000152;gene_name=LINC02968;ID=intron:HG00140_ch_T0000152:1;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1616272	1616331	.	+	.	source_transcript=ENST00000850738.1;source_transcript_name=LINC02968-234;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850738.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850738.1,ENST00000850738.1;transcript_id=HG00140_ch_T0000152;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000152;transcript_name=HG00140_ch_T0000152;gene_name=LINC02968;ID=exon:HG00140_ch_T0000152:2;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1616332	1620670	.	+	.	source_transcript=ENST00000850738.1;source_transcript_name=LINC02968-234;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850738.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850738.1,ENST00000850738.1;transcript_id=HG00140_ch_T0000152;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000152;transcript_name=HG00140_ch_T0000152;gene_name=LINC02968;ID=intron:HG00140_ch_T0000152:2;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1620671	1620917	.	+	.	source_transcript=ENST00000850738.1;source_transcript_name=LINC02968-234;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850738.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850738.1,ENST00000850738.1;transcript_id=HG00140_ch_T0000152;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000152;transcript_name=HG00140_ch_T0000152;gene_name=LINC02968;ID=exon:HG00140_ch_T0000152:3;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1525698	1595656	1000	+	.	source_transcript=ENST00000850743.1;source_transcript_name=LINC02968-239;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850743.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850743.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850743.1,ENST00000850743.1;transcript_id=HG00140_ch_T0000153;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_G0000036;transcript_name=HG00140_ch_T0000153;gene_name=LINC02968;ID=HG00140_ch_T0000153;Name=LINC02968
HG00140_chrY	CAT	exon	1525698	1525943	.	+	.	source_transcript=ENST00000850743.1;source_transcript_name=LINC02968-239;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850743.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850743.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850743.1,ENST00000850743.1;transcript_id=HG00140_ch_T0000153;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000153;transcript_name=HG00140_ch_T0000153;gene_name=LINC02968;ID=exon:HG00140_ch_T0000153:0;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1525944	1590674	.	+	.	source_transcript=ENST00000850743.1;source_transcript_name=LINC02968-239;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850743.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850743.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850743.1,ENST00000850743.1;transcript_id=HG00140_ch_T0000153;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000153;transcript_name=HG00140_ch_T0000153;gene_name=LINC02968;ID=intron:HG00140_ch_T0000153:0;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1590675	1590762	.	+	.	source_transcript=ENST00000850743.1;source_transcript_name=LINC02968-239;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850743.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850743.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850743.1,ENST00000850743.1;transcript_id=HG00140_ch_T0000153;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000153;transcript_name=HG00140_ch_T0000153;gene_name=LINC02968;ID=exon:HG00140_ch_T0000153:1;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1590763	1595491	.	+	.	source_transcript=ENST00000850743.1;source_transcript_name=LINC02968-239;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850743.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850743.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850743.1,ENST00000850743.1;transcript_id=HG00140_ch_T0000153;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000153;transcript_name=HG00140_ch_T0000153;gene_name=LINC02968;ID=intron:HG00140_ch_T0000153:1;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1595492	1595656	.	+	.	source_transcript=ENST00000850743.1;source_transcript_name=LINC02968-239;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850743.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850743.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850743.1,ENST00000850743.1;transcript_id=HG00140_ch_T0000153;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000153;transcript_name=HG00140_ch_T0000153;gene_name=LINC02968;ID=exon:HG00140_ch_T0000153:2;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1525700	1616461	1000	+	.	source_transcript=ENST00000850687.1;source_transcript_name=LINC02968-232;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850687.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850687.1,ENST00000850687.1;transcript_id=HG00140_ch_T0000154;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_G0000036;transcript_name=HG00140_ch_T0000154;gene_name=LINC02968;ID=HG00140_ch_T0000154;Name=LINC02968
HG00140_chrY	CAT	exon	1525700	1525904	.	+	.	source_transcript=ENST00000850687.1;source_transcript_name=LINC02968-232;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850687.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850687.1,ENST00000850687.1;transcript_id=HG00140_ch_T0000154;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000154;transcript_name=HG00140_ch_T0000154;gene_name=LINC02968;ID=exon:HG00140_ch_T0000154:0;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1525905	1590674	.	+	.	source_transcript=ENST00000850687.1;source_transcript_name=LINC02968-232;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850687.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850687.1,ENST00000850687.1;transcript_id=HG00140_ch_T0000154;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000154;transcript_name=HG00140_ch_T0000154;gene_name=LINC02968;ID=intron:HG00140_ch_T0000154:0;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1590675	1590762	.	+	.	source_transcript=ENST00000850687.1;source_transcript_name=LINC02968-232;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850687.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850687.1,ENST00000850687.1;transcript_id=HG00140_ch_T0000154;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000154;transcript_name=HG00140_ch_T0000154;gene_name=LINC02968;ID=exon:HG00140_ch_T0000154:1;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1590763	1606915	.	+	.	source_transcript=ENST00000850687.1;source_transcript_name=LINC02968-232;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850687.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850687.1,ENST00000850687.1;transcript_id=HG00140_ch_T0000154;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000154;transcript_name=HG00140_ch_T0000154;gene_name=LINC02968;ID=intron:HG00140_ch_T0000154:1;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1606916	1607011	.	+	.	source_transcript=ENST00000850687.1;source_transcript_name=LINC02968-232;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850687.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850687.1,ENST00000850687.1;transcript_id=HG00140_ch_T0000154;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000154;transcript_name=HG00140_ch_T0000154;gene_name=LINC02968;ID=exon:HG00140_ch_T0000154:2;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1607012	1616271	.	+	.	source_transcript=ENST00000850687.1;source_transcript_name=LINC02968-232;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850687.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850687.1,ENST00000850687.1;transcript_id=HG00140_ch_T0000154;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000154;transcript_name=HG00140_ch_T0000154;gene_name=LINC02968;ID=intron:HG00140_ch_T0000154:2;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1616272	1616461	.	+	.	source_transcript=ENST00000850687.1;source_transcript_name=LINC02968-232;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850687.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850687.1,ENST00000850687.1;transcript_id=HG00140_ch_T0000154;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000154;transcript_name=HG00140_ch_T0000154;gene_name=LINC02968;ID=exon:HG00140_ch_T0000154:3;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1597185	1606973	1000	+	.	source_transcript=ENST00000850827.1;source_transcript_name=LINC02968-246;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850827.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850827.1;transcript_score=299.775;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850827.1,ENST00000850827.1;transcript_id=HG00140_ch_T0000155;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_G0000036;transcript_name=HG00140_ch_T0000155;gene_name=LINC02968;ID=HG00140_ch_T0000155;Name=LINC02968
HG00140_chrY	CAT	exon	1597185	1597324	.	+	.	source_transcript=ENST00000850827.1;source_transcript_name=LINC02968-246;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850827.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850827.1;transcript_score=299.775;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850827.1,ENST00000850827.1;transcript_id=HG00140_ch_T0000155;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000155;transcript_name=HG00140_ch_T0000155;gene_name=LINC02968;ID=exon:HG00140_ch_T0000155:0;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1597325	1598552	.	+	.	source_transcript=ENST00000850827.1;source_transcript_name=LINC02968-246;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850827.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850827.1;transcript_score=299.775;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850827.1,ENST00000850827.1;transcript_id=HG00140_ch_T0000155;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000155;transcript_name=HG00140_ch_T0000155;gene_name=LINC02968;ID=intron:HG00140_ch_T0000155:0;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1598553	1598799	.	+	.	source_transcript=ENST00000850827.1;source_transcript_name=LINC02968-246;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850827.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850827.1;transcript_score=299.775;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850827.1,ENST00000850827.1;transcript_id=HG00140_ch_T0000155;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000155;transcript_name=HG00140_ch_T0000155;gene_name=LINC02968;ID=exon:HG00140_ch_T0000155:1;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1598800	1606915	.	+	.	source_transcript=ENST00000850827.1;source_transcript_name=LINC02968-246;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850827.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850827.1;transcript_score=299.775;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850827.1,ENST00000850827.1;transcript_id=HG00140_ch_T0000155;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000155;transcript_name=HG00140_ch_T0000155;gene_name=LINC02968;ID=intron:HG00140_ch_T0000155:1;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1606916	1606973	.	+	.	source_transcript=ENST00000850827.1;source_transcript_name=LINC02968-246;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850827.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850827.1;transcript_score=299.775;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850827.1,ENST00000850827.1;transcript_id=HG00140_ch_T0000155;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000155;transcript_name=HG00140_ch_T0000155;gene_name=LINC02968;ID=exon:HG00140_ch_T0000155:2;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1598720	1628189	1000	+	.	source_transcript=ENST00000850830.1;source_transcript_name=LINC02968-247;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850830.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850830.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850830.1,ENST00000850830.1;transcript_id=HG00140_ch_T0000156;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_G0000036;transcript_name=HG00140_ch_T0000156;gene_name=LINC02968;ID=HG00140_ch_T0000156;Name=LINC02968
HG00140_chrY	CAT	exon	1598720	1598799	.	+	.	source_transcript=ENST00000850830.1;source_transcript_name=LINC02968-247;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850830.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850830.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850830.1,ENST00000850830.1;transcript_id=HG00140_ch_T0000156;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000156;transcript_name=HG00140_ch_T0000156;gene_name=LINC02968;ID=exon:HG00140_ch_T0000156:0;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1598800	1620670	.	+	.	source_transcript=ENST00000850830.1;source_transcript_name=LINC02968-247;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850830.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850830.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850830.1,ENST00000850830.1;transcript_id=HG00140_ch_T0000156;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000156;transcript_name=HG00140_ch_T0000156;gene_name=LINC02968;ID=intron:HG00140_ch_T0000156:0;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1620671	1620972	.	+	.	source_transcript=ENST00000850830.1;source_transcript_name=LINC02968-247;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850830.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850830.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850830.1,ENST00000850830.1;transcript_id=HG00140_ch_T0000156;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000156;transcript_name=HG00140_ch_T0000156;gene_name=LINC02968;ID=exon:HG00140_ch_T0000156:1;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1620973	1627935	.	+	.	source_transcript=ENST00000850830.1;source_transcript_name=LINC02968-247;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850830.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850830.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850830.1,ENST00000850830.1;transcript_id=HG00140_ch_T0000156;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000156;transcript_name=HG00140_ch_T0000156;gene_name=LINC02968;ID=intron:HG00140_ch_T0000156:1;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1627936	1628189	.	+	.	source_transcript=ENST00000850830.1;source_transcript_name=LINC02968-247;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850830.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850830.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850830.1,ENST00000850830.1;transcript_id=HG00140_ch_T0000156;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000156;transcript_name=HG00140_ch_T0000156;gene_name=LINC02968;ID=exon:HG00140_ch_T0000156:2;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1615642	1616810	1000	+	.	source_transcript=ENST00000850748.1;source_transcript_name=LINC02968-244;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850748.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850748.1;transcript_score=299.858;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850748.1,ENST00000850748.1;transcript_id=HG00140_ch_T0000157;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_G0000036;transcript_name=HG00140_ch_T0000157;gene_name=LINC02968;ID=HG00140_ch_T0000157;Name=LINC02968
HG00140_chrY	CAT	exon	1615642	1615807	.	+	.	source_transcript=ENST00000850748.1;source_transcript_name=LINC02968-244;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850748.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850748.1;transcript_score=299.858;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850748.1,ENST00000850748.1;transcript_id=HG00140_ch_T0000157;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000157;transcript_name=HG00140_ch_T0000157;gene_name=LINC02968;ID=exon:HG00140_ch_T0000157:0;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1615808	1616271	.	+	.	source_transcript=ENST00000850748.1;source_transcript_name=LINC02968-244;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850748.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850748.1;transcript_score=299.858;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850748.1,ENST00000850748.1;transcript_id=HG00140_ch_T0000157;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000157;transcript_name=HG00140_ch_T0000157;gene_name=LINC02968;ID=intron:HG00140_ch_T0000157:0;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1616272	1616810	.	+	.	source_transcript=ENST00000850748.1;source_transcript_name=LINC02968-244;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850748.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850748.1;transcript_score=299.858;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850748.1,ENST00000850748.1;transcript_id=HG00140_ch_T0000157;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000157;transcript_name=HG00140_ch_T0000157;gene_name=LINC02968;ID=exon:HG00140_ch_T0000157:1;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1616089	1620916	1000	+	.	source_transcript=ENST00000850745.1;source_transcript_name=LINC02968-241;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850745.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850745.1,ENST00000850745.1;transcript_id=HG00140_ch_T0000158;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_G0000036;transcript_name=HG00140_ch_T0000158;gene_name=LINC02968;ID=HG00140_ch_T0000158;Name=LINC02968
HG00140_chrY	CAT	exon	1616089	1616167	.	+	.	source_transcript=ENST00000850745.1;source_transcript_name=LINC02968-241;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850745.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850745.1,ENST00000850745.1;transcript_id=HG00140_ch_T0000158;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000158;transcript_name=HG00140_ch_T0000158;gene_name=LINC02968;ID=exon:HG00140_ch_T0000158:0;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1616168	1620670	.	+	.	source_transcript=ENST00000850745.1;source_transcript_name=LINC02968-241;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850745.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850745.1,ENST00000850745.1;transcript_id=HG00140_ch_T0000158;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000158;transcript_name=HG00140_ch_T0000158;gene_name=LINC02968;ID=intron:HG00140_ch_T0000158:0;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1620671	1620916	.	+	.	source_transcript=ENST00000850745.1;source_transcript_name=LINC02968-241;source_gene=ENSG00000310540.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310540.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850745.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=ENST00000850745.1,ENST00000850745.1;transcript_id=HG00140_ch_T0000158;gene_id=HG00140_ch_G0000036;Parent=HG00140_ch_T0000158;transcript_name=HG00140_ch_T0000158;gene_name=LINC02968;ID=exon:HG00140_ch_T0000158:1;Name=LINC02968;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	1631214	1632649	.	+	.	source_gene_common_name=ENSG00000292330;source_gene=ENSG00000292330.1;alternative_source_transcripts=ENST00000711120.1,ENST00000711120.1;gene_id=HG00140_ch_G0000037;gene_biotype=lncRNA;gene_name=ENSG00000292330;gene_sources=liftoff;ID=HG00140_ch_G0000037;Name=ENSG00000292330
HG00140_chrY	CAT	transcript	1631214	1632649	1000	+	.	source_transcript=ENST00000711120.1;source_transcript_name=ENST00000711120;source_gene=ENSG00000292330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711120.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711120.1;transcript_score=299.635;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292330;alternative_source_transcripts=ENST00000711120.1,ENST00000711120.1;transcript_id=HG00140_ch_T0000159;gene_id=HG00140_ch_G0000037;Parent=HG00140_ch_G0000037;transcript_name=HG00140_ch_T0000159;gene_name=ENSG00000292330;ID=HG00140_ch_T0000159;Name=ENSG00000292330
HG00140_chrY	CAT	exon	1631214	1631419	.	+	.	source_transcript=ENST00000711120.1;source_transcript_name=ENST00000711120;source_gene=ENSG00000292330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711120.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711120.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292330;alternative_source_transcripts=ENST00000711120.1,ENST00000711120.1;transcript_id=HG00140_ch_T0000159;gene_id=HG00140_ch_G0000037;Parent=HG00140_ch_T0000159;transcript_name=HG00140_ch_T0000159;gene_name=ENSG00000292330;ID=exon:HG00140_ch_T0000159:0;Name=ENSG00000292330;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1631420	1632305	.	+	.	source_transcript=ENST00000711120.1;source_transcript_name=ENST00000711120;source_gene=ENSG00000292330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711120.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711120.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292330;alternative_source_transcripts=ENST00000711120.1,ENST00000711120.1;transcript_id=HG00140_ch_T0000159;gene_id=HG00140_ch_G0000037;Parent=HG00140_ch_T0000159;transcript_name=HG00140_ch_T0000159;gene_name=ENSG00000292330;ID=intron:HG00140_ch_T0000159:0;Name=ENSG00000292330;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1632306	1632649	.	+	.	source_transcript=ENST00000711120.1;source_transcript_name=ENST00000711120;source_gene=ENSG00000292330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711120.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711120.1;transcript_score=299.635;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292330;alternative_source_transcripts=ENST00000711120.1,ENST00000711120.1;transcript_id=HG00140_ch_T0000159;gene_id=HG00140_ch_G0000037;Parent=HG00140_ch_T0000159;transcript_name=HG00140_ch_T0000159;gene_name=ENSG00000292330;ID=exon:HG00140_ch_T0000159:1;Name=ENSG00000292330;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	1747255	1758464	.	+	.	source_gene_common_name=ENSG00000310547;source_gene=ENSG00000310547.1;alternative_source_transcripts=ENST00000850714.1,ENST00000850714.1;gene_id=HG00140_ch_G0000038;gene_biotype=lncRNA;gene_name=ENSG00000310547;gene_sources=liftoff;ID=HG00140_ch_G0000038;Name=ENSG00000310547
HG00140_chrY	CAT	transcript	1747255	1758464	1000	+	.	source_transcript=ENST00000850714.1;source_transcript_name=ENST00000850714;source_gene=ENSG00000310547.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310547.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850714.1;transcript_score=298.868;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310547;alternative_source_transcripts=ENST00000850714.1,ENST00000850714.1;transcript_id=HG00140_ch_T0000160;gene_id=HG00140_ch_G0000038;Parent=HG00140_ch_G0000038;transcript_name=HG00140_ch_T0000160;gene_name=ENSG00000310547;ID=HG00140_ch_T0000160;Name=ENSG00000310547
HG00140_chrY	CAT	exon	1747255	1747445	.	+	.	source_transcript=ENST00000850714.1;source_transcript_name=ENST00000850714;source_gene=ENSG00000310547.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310547.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850714.1;transcript_score=298.868;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310547;alternative_source_transcripts=ENST00000850714.1,ENST00000850714.1;transcript_id=HG00140_ch_T0000160;gene_id=HG00140_ch_G0000038;Parent=HG00140_ch_T0000160;transcript_name=HG00140_ch_T0000160;gene_name=ENSG00000310547;ID=exon:HG00140_ch_T0000160:0;Name=ENSG00000310547;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1747446	1757239	.	+	.	source_transcript=ENST00000850714.1;source_transcript_name=ENST00000850714;source_gene=ENSG00000310547.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310547.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850714.1;transcript_score=298.868;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310547;alternative_source_transcripts=ENST00000850714.1,ENST00000850714.1;transcript_id=HG00140_ch_T0000160;gene_id=HG00140_ch_G0000038;Parent=HG00140_ch_T0000160;transcript_name=HG00140_ch_T0000160;gene_name=ENSG00000310547;ID=intron:HG00140_ch_T0000160:0;Name=ENSG00000310547;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1757240	1757349	.	+	.	source_transcript=ENST00000850714.1;source_transcript_name=ENST00000850714;source_gene=ENSG00000310547.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310547.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850714.1;transcript_score=298.868;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310547;alternative_source_transcripts=ENST00000850714.1,ENST00000850714.1;transcript_id=HG00140_ch_T0000160;gene_id=HG00140_ch_G0000038;Parent=HG00140_ch_T0000160;transcript_name=HG00140_ch_T0000160;gene_name=ENSG00000310547;ID=exon:HG00140_ch_T0000160:1;Name=ENSG00000310547;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1757350	1757797	.	+	.	source_transcript=ENST00000850714.1;source_transcript_name=ENST00000850714;source_gene=ENSG00000310547.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310547.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850714.1;transcript_score=298.868;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310547;alternative_source_transcripts=ENST00000850714.1,ENST00000850714.1;transcript_id=HG00140_ch_T0000160;gene_id=HG00140_ch_G0000038;Parent=HG00140_ch_T0000160;transcript_name=HG00140_ch_T0000160;gene_name=ENSG00000310547;ID=intron:HG00140_ch_T0000160:1;Name=ENSG00000310547;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1757798	1758464	.	+	.	source_transcript=ENST00000850714.1;source_transcript_name=ENST00000850714;source_gene=ENSG00000310547.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310547.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850714.1;transcript_score=298.868;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310547;alternative_source_transcripts=ENST00000850714.1,ENST00000850714.1;transcript_id=HG00140_ch_T0000160;gene_id=HG00140_ch_G0000038;Parent=HG00140_ch_T0000160;transcript_name=HG00140_ch_T0000160;gene_name=ENSG00000310547;ID=exon:HG00140_ch_T0000160:2;Name=ENSG00000310547;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	1897420	2181672	.	-	.	source_gene_common_name=DHRSX;source_gene=ENSG00000292338.1;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;gene_id=HG00140_ch_G0000039;gene_biotype=protein_coding;gene_name=DHRSX;gene_sources=liftoff;ID=HG00140_ch_G0000039;Name=DHRSX
HG00140_chrY	CAT	transcript	1897420	2179843	100	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG00140_ch_T0000161;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_G0000039;transcript_name=HG00140_ch_T0000161;gene_name=DHRSX;ID=HG00140_ch_T0000161;Name=DHRSX
HG00140_chrY	CAT	exon	1897420	1899143	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG00140_ch_T0000161;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000161;transcript_name=HG00140_ch_T0000161;gene_name=DHRSX;ID=exon:HG00140_ch_T0000161:0;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1898955	1899143	.	-	0	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG00140_ch_T0000161;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000161;transcript_name=HG00140_ch_T0000161;gene_name=DHRSX;ID=CDS:HG00140_ch_T0000161:0;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	1898955	1898957	.	-	0	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG00140_ch_T0000161;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000161;transcript_name=HG00140_ch_T0000161;gene_name=DHRSX;ID=stop_codon:HG00140_ch_T0000161;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1899144	1921549	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG00140_ch_T0000161;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000161;transcript_name=HG00140_ch_T0000161;gene_name=DHRSX;ID=intron:HG00140_ch_T0000161:0;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1921550	1921757	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG00140_ch_T0000161;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000161;transcript_name=HG00140_ch_T0000161;gene_name=DHRSX;ID=exon:HG00140_ch_T0000161:1;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1921550	1921757	.	-	1	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG00140_ch_T0000161;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000161;transcript_name=HG00140_ch_T0000161;gene_name=DHRSX;ID=CDS:HG00140_ch_T0000161:1;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1921758	1945506	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG00140_ch_T0000161;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000161;transcript_name=HG00140_ch_T0000161;gene_name=DHRSX;ID=intron:HG00140_ch_T0000161:1;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1945507	1945714	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG00140_ch_T0000161;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000161;transcript_name=HG00140_ch_T0000161;gene_name=DHRSX;ID=exon:HG00140_ch_T0000161:2;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1945507	1945714	.	-	2	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG00140_ch_T0000161;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000161;transcript_name=HG00140_ch_T0000161;gene_name=DHRSX;ID=CDS:HG00140_ch_T0000161:2;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1945715	1965155	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG00140_ch_T0000161;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000161;transcript_name=HG00140_ch_T0000161;gene_name=DHRSX;ID=intron:HG00140_ch_T0000161:2;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1965156	1965257	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG00140_ch_T0000161;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000161;transcript_name=HG00140_ch_T0000161;gene_name=DHRSX;ID=exon:HG00140_ch_T0000161:3;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1965156	1965257	.	-	2	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG00140_ch_T0000161;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000161;transcript_name=HG00140_ch_T0000161;gene_name=DHRSX;ID=CDS:HG00140_ch_T0000161:3;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1965258	2087681	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG00140_ch_T0000161;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000161;transcript_name=HG00140_ch_T0000161;gene_name=DHRSX;ID=intron:HG00140_ch_T0000161:3;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2087682	2087750	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG00140_ch_T0000161;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000161;transcript_name=HG00140_ch_T0000161;gene_name=DHRSX;ID=exon:HG00140_ch_T0000161:4;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2087682	2087750	.	-	2	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG00140_ch_T0000161;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000161;transcript_name=HG00140_ch_T0000161;gene_name=DHRSX;ID=CDS:HG00140_ch_T0000161:4;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2087751	2104134	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG00140_ch_T0000161;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000161;transcript_name=HG00140_ch_T0000161;gene_name=DHRSX;ID=intron:HG00140_ch_T0000161:4;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2104135	2104242	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG00140_ch_T0000161;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000161;transcript_name=HG00140_ch_T0000161;gene_name=DHRSX;ID=exon:HG00140_ch_T0000161:5;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2104135	2104242	.	-	2	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG00140_ch_T0000161;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000161;transcript_name=HG00140_ch_T0000161;gene_name=DHRSX;ID=CDS:HG00140_ch_T0000161:5;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2104243	2179683	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG00140_ch_T0000161;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000161;transcript_name=HG00140_ch_T0000161;gene_name=DHRSX;ID=intron:HG00140_ch_T0000161:5;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2179684	2179843	.	-	.	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG00140_ch_T0000161;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000161;transcript_name=HG00140_ch_T0000161;gene_name=DHRSX;ID=exon:HG00140_ch_T0000161:6;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2179684	2179792	.	-	0	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG00140_ch_T0000161;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000161;transcript_name=HG00140_ch_T0000161;gene_name=DHRSX;ID=CDS:HG00140_ch_T0000161:6;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	2179790	2179792	.	-	0	source_transcript=ENST00000711204.1;source_transcript_name=DHRSX-214;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711204.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711204.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711204.1,ENST00000711204.1;transcript_id=HG00140_ch_T0000161;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000161;transcript_name=HG00140_ch_T0000161;gene_name=DHRSX;ID=start_codon:HG00140_ch_T0000161;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1921589	2179840	100	-	.	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=HG00140_ch_T0000162;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_G0000039;transcript_name=HG00140_ch_T0000162;gene_name=DHRSX;ID=HG00140_ch_T0000162;Name=DHRSX
HG00140_chrY	CAT	exon	1921589	1921757	.	-	.	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=HG00140_ch_T0000162;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000162;transcript_name=HG00140_ch_T0000162;gene_name=DHRSX;ID=exon:HG00140_ch_T0000162:0;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1921589	1921757	.	-	1	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=HG00140_ch_T0000162;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000162;transcript_name=HG00140_ch_T0000162;gene_name=DHRSX;ID=CDS:HG00140_ch_T0000162:0;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1921758	1945506	.	-	.	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=HG00140_ch_T0000162;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000162;transcript_name=HG00140_ch_T0000162;gene_name=DHRSX;ID=intron:HG00140_ch_T0000162:0;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1945507	1945714	.	-	.	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=HG00140_ch_T0000162;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000162;transcript_name=HG00140_ch_T0000162;gene_name=DHRSX;ID=exon:HG00140_ch_T0000162:1;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1945507	1945714	.	-	2	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=HG00140_ch_T0000162;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000162;transcript_name=HG00140_ch_T0000162;gene_name=DHRSX;ID=CDS:HG00140_ch_T0000162:1;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1945715	1965155	.	-	.	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=HG00140_ch_T0000162;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000162;transcript_name=HG00140_ch_T0000162;gene_name=DHRSX;ID=intron:HG00140_ch_T0000162:1;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1965156	1965257	.	-	.	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=HG00140_ch_T0000162;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000162;transcript_name=HG00140_ch_T0000162;gene_name=DHRSX;ID=exon:HG00140_ch_T0000162:2;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1965156	1965257	.	-	2	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=HG00140_ch_T0000162;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000162;transcript_name=HG00140_ch_T0000162;gene_name=DHRSX;ID=CDS:HG00140_ch_T0000162:2;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1965258	2104134	.	-	.	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=HG00140_ch_T0000162;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000162;transcript_name=HG00140_ch_T0000162;gene_name=DHRSX;ID=intron:HG00140_ch_T0000162:2;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2104135	2104242	.	-	.	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=HG00140_ch_T0000162;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000162;transcript_name=HG00140_ch_T0000162;gene_name=DHRSX;ID=exon:HG00140_ch_T0000162:3;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2104135	2104242	.	-	2	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=HG00140_ch_T0000162;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000162;transcript_name=HG00140_ch_T0000162;gene_name=DHRSX;ID=CDS:HG00140_ch_T0000162:3;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2104243	2179683	.	-	.	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=HG00140_ch_T0000162;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000162;transcript_name=HG00140_ch_T0000162;gene_name=DHRSX;ID=intron:HG00140_ch_T0000162:3;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2179684	2179840	.	-	.	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=HG00140_ch_T0000162;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000162;transcript_name=HG00140_ch_T0000162;gene_name=DHRSX;ID=exon:HG00140_ch_T0000162:4;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2179684	2179792	.	-	0	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=HG00140_ch_T0000162;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000162;transcript_name=HG00140_ch_T0000162;gene_name=DHRSX;ID=CDS:HG00140_ch_T0000162:4;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	2179790	2179792	.	-	0	source_transcript=ENST00000711203.1;source_transcript_name=DHRSX-213;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711203.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711203.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711203.1,ENST00000711203.1;transcript_id=HG00140_ch_T0000162;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000162;transcript_name=HG00140_ch_T0000162;gene_name=DHRSX;ID=start_codon:HG00140_ch_T0000162;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1940123	1945704	1000	-	.	source_transcript=ENST00000711202.1;source_transcript_name=DHRSX-212;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711202.1;transcript_score=299.825;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711202.1,ENST00000711202.1;transcript_id=HG00140_ch_T0000163;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_G0000039;transcript_name=HG00140_ch_T0000163;gene_name=DHRSX;ID=HG00140_ch_T0000163;Name=DHRSX
HG00140_chrY	CAT	exon	1940123	1940496	.	-	.	source_transcript=ENST00000711202.1;source_transcript_name=DHRSX-212;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711202.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711202.1,ENST00000711202.1;transcript_id=HG00140_ch_T0000163;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000163;transcript_name=HG00140_ch_T0000163;gene_name=DHRSX;ID=exon:HG00140_ch_T0000163:0;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1940497	1945506	.	-	.	source_transcript=ENST00000711202.1;source_transcript_name=DHRSX-212;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711202.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711202.1,ENST00000711202.1;transcript_id=HG00140_ch_T0000163;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000163;transcript_name=HG00140_ch_T0000163;gene_name=DHRSX;ID=intron:HG00140_ch_T0000163:0;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1945507	1945704	.	-	.	source_transcript=ENST00000711202.1;source_transcript_name=DHRSX-212;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711202.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711202.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711202.1,ENST00000711202.1;transcript_id=HG00140_ch_T0000163;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000163;transcript_name=HG00140_ch_T0000163;gene_name=DHRSX;ID=exon:HG00140_ch_T0000163:1;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1945537	2179517	100	-	.	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=HG00140_ch_T0000164;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_G0000039;transcript_name=HG00140_ch_T0000164;gene_name=DHRSX;ID=HG00140_ch_T0000164;Name=DHRSX
HG00140_chrY	CAT	exon	1945537	1945714	.	-	.	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=HG00140_ch_T0000164;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000164;transcript_name=HG00140_ch_T0000164;gene_name=DHRSX;ID=exon:HG00140_ch_T0000164:0;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1945537	1945714	.	-	2	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=HG00140_ch_T0000164;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000164;transcript_name=HG00140_ch_T0000164;gene_name=DHRSX;ID=CDS:HG00140_ch_T0000164:0;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1945715	1965155	.	-	.	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=HG00140_ch_T0000164;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000164;transcript_name=HG00140_ch_T0000164;gene_name=DHRSX;ID=intron:HG00140_ch_T0000164:0;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1965156	1965257	.	-	.	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=HG00140_ch_T0000164;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000164;transcript_name=HG00140_ch_T0000164;gene_name=DHRSX;ID=exon:HG00140_ch_T0000164:1;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1965156	1965257	.	-	2	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=HG00140_ch_T0000164;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000164;transcript_name=HG00140_ch_T0000164;gene_name=DHRSX;ID=CDS:HG00140_ch_T0000164:1;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1965258	2087681	.	-	.	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=HG00140_ch_T0000164;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000164;transcript_name=HG00140_ch_T0000164;gene_name=DHRSX;ID=intron:HG00140_ch_T0000164:1;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2087682	2087750	.	-	.	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=HG00140_ch_T0000164;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000164;transcript_name=HG00140_ch_T0000164;gene_name=DHRSX;ID=exon:HG00140_ch_T0000164:2;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2087682	2087750	.	-	2	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=HG00140_ch_T0000164;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000164;transcript_name=HG00140_ch_T0000164;gene_name=DHRSX;ID=CDS:HG00140_ch_T0000164:2;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2087751	2104134	.	-	.	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=HG00140_ch_T0000164;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000164;transcript_name=HG00140_ch_T0000164;gene_name=DHRSX;ID=intron:HG00140_ch_T0000164:2;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2104135	2104242	.	-	.	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=HG00140_ch_T0000164;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000164;transcript_name=HG00140_ch_T0000164;gene_name=DHRSX;ID=exon:HG00140_ch_T0000164:3;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2104135	2104150	.	-	0	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=HG00140_ch_T0000164;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000164;transcript_name=HG00140_ch_T0000164;gene_name=DHRSX;ID=CDS:HG00140_ch_T0000164:3;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	2104148	2104150	.	-	0	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=HG00140_ch_T0000164;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000164;transcript_name=HG00140_ch_T0000164;gene_name=DHRSX;ID=start_codon:HG00140_ch_T0000164;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2104243	2179176	.	-	.	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=HG00140_ch_T0000164;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000164;transcript_name=HG00140_ch_T0000164;gene_name=DHRSX;ID=intron:HG00140_ch_T0000164:3;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2179177	2179517	.	-	.	source_transcript=ENST00000711201.1;source_transcript_name=DHRSX-211;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711201.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711201.1,ENST00000711201.1;transcript_id=HG00140_ch_T0000164;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000164;transcript_name=HG00140_ch_T0000164;gene_name=DHRSX;ID=exon:HG00140_ch_T0000164:4;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1945621	2181672	1000	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=299.814;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=HG00140_ch_T0000165;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_G0000039;transcript_name=HG00140_ch_T0000165;gene_name=DHRSX;ID=HG00140_ch_T0000165;Name=DHRSX
HG00140_chrY	CAT	exon	1945621	1945714	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=299.814;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=HG00140_ch_T0000165;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000165;transcript_name=HG00140_ch_T0000165;gene_name=DHRSX;ID=exon:HG00140_ch_T0000165:0;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1945715	1965155	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=299.814;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=HG00140_ch_T0000165;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000165;transcript_name=HG00140_ch_T0000165;gene_name=DHRSX;ID=intron:HG00140_ch_T0000165:0;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	1965156	1965257	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=299.814;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=HG00140_ch_T0000165;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000165;transcript_name=HG00140_ch_T0000165;gene_name=DHRSX;ID=exon:HG00140_ch_T0000165:1;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1965258	2071230	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=299.814;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=HG00140_ch_T0000165;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000165;transcript_name=HG00140_ch_T0000165;gene_name=DHRSX;ID=intron:HG00140_ch_T0000165:1;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2071231	2071351	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=299.814;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=HG00140_ch_T0000165;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000165;transcript_name=HG00140_ch_T0000165;gene_name=DHRSX;ID=exon:HG00140_ch_T0000165:2;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2071352	2087681	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=299.814;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=HG00140_ch_T0000165;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000165;transcript_name=HG00140_ch_T0000165;gene_name=DHRSX;ID=intron:HG00140_ch_T0000165:2;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2087682	2087750	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=299.814;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=HG00140_ch_T0000165;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000165;transcript_name=HG00140_ch_T0000165;gene_name=DHRSX;ID=exon:HG00140_ch_T0000165:3;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2087751	2104134	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=299.814;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=HG00140_ch_T0000165;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000165;transcript_name=HG00140_ch_T0000165;gene_name=DHRSX;ID=intron:HG00140_ch_T0000165:3;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2104135	2104242	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=299.814;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=HG00140_ch_T0000165;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000165;transcript_name=HG00140_ch_T0000165;gene_name=DHRSX;ID=exon:HG00140_ch_T0000165:4;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2104243	2181627	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=299.814;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=HG00140_ch_T0000165;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000165;transcript_name=HG00140_ch_T0000165;gene_name=DHRSX;ID=intron:HG00140_ch_T0000165:4;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2181628	2181672	.	-	.	source_transcript=ENST00000711200.1;source_transcript_name=DHRSX-210;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711200.1;transcript_score=299.814;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711200.1,ENST00000711200.1;transcript_id=HG00140_ch_T0000165;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000165;transcript_name=HG00140_ch_T0000165;gene_name=DHRSX;ID=exon:HG00140_ch_T0000165:5;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	1965156	2179455	100	-	.	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=HG00140_ch_T0000166;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_G0000039;transcript_name=HG00140_ch_T0000166;gene_name=DHRSX;ID=HG00140_ch_T0000166;Name=DHRSX
HG00140_chrY	CAT	exon	1965156	1965257	.	-	.	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=HG00140_ch_T0000166;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000166;transcript_name=HG00140_ch_T0000166;gene_name=DHRSX;ID=exon:HG00140_ch_T0000166:0;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	1965156	1965228	.	-	0	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=HG00140_ch_T0000166;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000166;transcript_name=HG00140_ch_T0000166;gene_name=DHRSX;ID=CDS:HG00140_ch_T0000166:0;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	1965226	1965228	.	-	0	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=HG00140_ch_T0000166;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000166;transcript_name=HG00140_ch_T0000166;gene_name=DHRSX;ID=start_codon:HG00140_ch_T0000166;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	1965258	2071230	.	-	.	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=HG00140_ch_T0000166;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000166;transcript_name=HG00140_ch_T0000166;gene_name=DHRSX;ID=intron:HG00140_ch_T0000166:0;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2071231	2071351	.	-	.	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=HG00140_ch_T0000166;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000166;transcript_name=HG00140_ch_T0000166;gene_name=DHRSX;ID=exon:HG00140_ch_T0000166:1;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2071352	2087681	.	-	.	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=HG00140_ch_T0000166;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000166;transcript_name=HG00140_ch_T0000166;gene_name=DHRSX;ID=intron:HG00140_ch_T0000166:1;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2087682	2087750	.	-	.	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=HG00140_ch_T0000166;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000166;transcript_name=HG00140_ch_T0000166;gene_name=DHRSX;ID=exon:HG00140_ch_T0000166:2;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2087751	2104134	.	-	.	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=HG00140_ch_T0000166;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000166;transcript_name=HG00140_ch_T0000166;gene_name=DHRSX;ID=intron:HG00140_ch_T0000166:2;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2104135	2104242	.	-	.	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=HG00140_ch_T0000166;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000166;transcript_name=HG00140_ch_T0000166;gene_name=DHRSX;ID=exon:HG00140_ch_T0000166:3;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2104243	2179176	.	-	.	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=HG00140_ch_T0000166;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000166;transcript_name=HG00140_ch_T0000166;gene_name=DHRSX;ID=intron:HG00140_ch_T0000166:3;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2179177	2179455	.	-	.	source_transcript=ENST00000711199.1;source_transcript_name=DHRSX-209;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711199.1,ENST00000711199.1;transcript_id=HG00140_ch_T0000166;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000166;transcript_name=HG00140_ch_T0000166;gene_name=DHRSX;ID=exon:HG00140_ch_T0000166:4;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2016688	2179827	1000	-	.	source_transcript=ENST00000711198.1;source_transcript_name=DHRSX-208;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711198.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711198.1,ENST00000711198.1;transcript_id=HG00140_ch_T0000168;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_G0000039;transcript_name=HG00140_ch_T0000168;gene_name=DHRSX;ID=HG00140_ch_T0000168;Name=DHRSX
HG00140_chrY	CAT	exon	2016688	2016856	.	-	.	source_transcript=ENST00000711198.1;source_transcript_name=DHRSX-208;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711198.1,ENST00000711198.1;transcript_id=HG00140_ch_T0000168;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000168;transcript_name=HG00140_ch_T0000168;gene_name=DHRSX;ID=exon:HG00140_ch_T0000168:0;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2016857	2087681	.	-	.	source_transcript=ENST00000711198.1;source_transcript_name=DHRSX-208;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711198.1,ENST00000711198.1;transcript_id=HG00140_ch_T0000168;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000168;transcript_name=HG00140_ch_T0000168;gene_name=DHRSX;ID=intron:HG00140_ch_T0000168:0;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2087682	2087750	.	-	.	source_transcript=ENST00000711198.1;source_transcript_name=DHRSX-208;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711198.1,ENST00000711198.1;transcript_id=HG00140_ch_T0000168;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000168;transcript_name=HG00140_ch_T0000168;gene_name=DHRSX;ID=exon:HG00140_ch_T0000168:1;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2087751	2104134	.	-	.	source_transcript=ENST00000711198.1;source_transcript_name=DHRSX-208;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711198.1,ENST00000711198.1;transcript_id=HG00140_ch_T0000168;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000168;transcript_name=HG00140_ch_T0000168;gene_name=DHRSX;ID=intron:HG00140_ch_T0000168:1;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2104135	2104242	.	-	.	source_transcript=ENST00000711198.1;source_transcript_name=DHRSX-208;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711198.1,ENST00000711198.1;transcript_id=HG00140_ch_T0000168;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000168;transcript_name=HG00140_ch_T0000168;gene_name=DHRSX;ID=exon:HG00140_ch_T0000168:2;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2104243	2179683	.	-	.	source_transcript=ENST00000711198.1;source_transcript_name=DHRSX-208;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711198.1,ENST00000711198.1;transcript_id=HG00140_ch_T0000168;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000168;transcript_name=HG00140_ch_T0000168;gene_name=DHRSX;ID=intron:HG00140_ch_T0000168:2;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2179684	2179827	.	-	.	source_transcript=ENST00000711198.1;source_transcript_name=DHRSX-208;source_gene=ENSG00000292338.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292338.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711198.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=ENST00000711198.1,ENST00000711198.1;transcript_id=HG00140_ch_T0000168;gene_id=HG00140_ch_G0000039;Parent=HG00140_ch_T0000168;transcript_name=HG00140_ch_T0000168;gene_name=DHRSX;ID=exon:HG00140_ch_T0000168:3;Name=DHRSX;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	2013156	2015271	.	-	.	source_gene_common_name=DHRSX-IT1;source_gene=ENSG00000292337.1;alternative_source_transcripts=ENST00000711205.1,ENST00000711205.1;gene_id=HG00140_ch_G0000040;gene_biotype=lncRNA;gene_name=DHRSX-IT1;gene_sources=liftoff;ID=HG00140_ch_G0000040;Name=DHRSX-IT1
HG00140_chrY	CAT	transcript	2013156	2015271	1000	-	.	source_transcript=ENST00000711205.1;source_transcript_name=DHRSX-IT1-202;source_gene=ENSG00000292337.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292337.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711205.1;transcript_score=299.693;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX-IT1;alternative_source_transcripts=ENST00000711205.1,ENST00000711205.1;transcript_id=HG00140_ch_T0000167;gene_id=HG00140_ch_G0000040;Parent=HG00140_ch_G0000040;transcript_name=HG00140_ch_T0000167;gene_name=DHRSX-IT1;ID=HG00140_ch_T0000167;Name=DHRSX-IT1
HG00140_chrY	CAT	exon	2013156	2013780	.	-	.	source_transcript=ENST00000711205.1;source_transcript_name=DHRSX-IT1-202;source_gene=ENSG00000292337.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292337.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711205.1;transcript_score=299.693;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX-IT1;alternative_source_transcripts=ENST00000711205.1,ENST00000711205.1;transcript_id=HG00140_ch_T0000167;gene_id=HG00140_ch_G0000040;Parent=HG00140_ch_T0000167;transcript_name=HG00140_ch_T0000167;gene_name=DHRSX-IT1;ID=exon:HG00140_ch_T0000167:0;Name=DHRSX-IT1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2013781	2015245	.	-	.	source_transcript=ENST00000711205.1;source_transcript_name=DHRSX-IT1-202;source_gene=ENSG00000292337.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292337.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711205.1;transcript_score=299.693;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX-IT1;alternative_source_transcripts=ENST00000711205.1,ENST00000711205.1;transcript_id=HG00140_ch_T0000167;gene_id=HG00140_ch_G0000040;Parent=HG00140_ch_T0000167;transcript_name=HG00140_ch_T0000167;gene_name=DHRSX-IT1;ID=intron:HG00140_ch_T0000167:0;Name=DHRSX-IT1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2015246	2015271	.	-	.	source_transcript=ENST00000711205.1;source_transcript_name=DHRSX-IT1-202;source_gene=ENSG00000292337.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292337.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711205.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711205.1;transcript_score=299.693;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX-IT1;alternative_source_transcripts=ENST00000711205.1,ENST00000711205.1;transcript_id=HG00140_ch_T0000167;gene_id=HG00140_ch_G0000040;Parent=HG00140_ch_T0000167;transcript_name=HG00140_ch_T0000167;gene_name=DHRSX-IT1;ID=exon:HG00140_ch_T0000167:1;Name=DHRSX-IT1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	2051890	2052001	.	-	.	source_gene_common_name=ENSG00000310552;source_gene=ENSG00000310552.1;alternative_source_transcripts=ENST00000850728.1,ENST00000850728.1;gene_id=HG00140_ch_G0000041;gene_biotype=lncRNA;gene_name=ENSG00000310552;gene_sources=liftoff;ID=HG00140_ch_G0000041;Name=ENSG00000310552
HG00140_chrY	CAT	transcript	2051890	2052001	1000	-	.	source_transcript=ENST00000850728.1;source_transcript_name=ENST00000850728;source_gene=ENSG00000310552.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310552.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850728.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310552;alternative_source_transcripts=ENST00000850728.1,ENST00000850728.1;transcript_id=HG00140_ch_T0000169;gene_id=HG00140_ch_G0000041;Parent=HG00140_ch_G0000041;transcript_name=HG00140_ch_T0000169;gene_name=ENSG00000310552;ID=HG00140_ch_T0000169;Name=ENSG00000310552
HG00140_chrY	CAT	exon	2051890	2052001	.	-	.	source_transcript=ENST00000850728.1;source_transcript_name=ENST00000850728;source_gene=ENSG00000310552.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310552.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850728.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310552;alternative_source_transcripts=ENST00000850728.1,ENST00000850728.1;transcript_id=HG00140_ch_T0000169;gene_id=HG00140_ch_G0000041;Parent=HG00140_ch_T0000169;transcript_name=HG00140_ch_T0000169;gene_name=ENSG00000310552;ID=exon:HG00140_ch_T0000169:0;Name=ENSG00000310552;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	2165282	2179843	.	-	.	source_gene_common_name=ZBED1;source_gene=ENSG00000292345.1;alternative_source_transcripts=ENST00000711172.1,ENST00000711172.1;gene_id=HG00140_ch_G0000042;gene_biotype=protein_coding;gene_name=ZBED1;gene_sources=liftoff;ID=HG00140_ch_G0000042;Name=ZBED1
HG00140_chrY	CAT	transcript	2165282	2179834	100	-	.	source_transcript=ENST00000711172.1;source_transcript_name=ZBED1-211;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711172.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711172.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711172.1,ENST00000711172.1;transcript_id=HG00140_ch_T0000170;gene_id=HG00140_ch_G0000042;Parent=HG00140_ch_G0000042;transcript_name=HG00140_ch_T0000170;gene_name=ZBED1;ID=HG00140_ch_T0000170;Name=ZBED1
HG00140_chrY	CAT	exon	2165282	2169635	.	-	.	source_transcript=ENST00000711172.1;source_transcript_name=ZBED1-211;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711172.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711172.1,ENST00000711172.1;transcript_id=HG00140_ch_T0000170;gene_id=HG00140_ch_G0000042;Parent=HG00140_ch_T0000170;transcript_name=HG00140_ch_T0000170;gene_name=ZBED1;ID=exon:HG00140_ch_T0000170:0;Name=ZBED1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2167498	2169582	.	-	0	source_transcript=ENST00000711172.1;source_transcript_name=ZBED1-211;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711172.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711172.1,ENST00000711172.1;transcript_id=HG00140_ch_T0000170;gene_id=HG00140_ch_G0000042;Parent=HG00140_ch_T0000170;transcript_name=HG00140_ch_T0000170;gene_name=ZBED1;ID=CDS:HG00140_ch_T0000170:0;Name=ZBED1;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	2167498	2167500	.	-	0	source_transcript=ENST00000711172.1;source_transcript_name=ZBED1-211;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711172.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711172.1,ENST00000711172.1;transcript_id=HG00140_ch_T0000170;gene_id=HG00140_ch_G0000042;Parent=HG00140_ch_T0000170;transcript_name=HG00140_ch_T0000170;gene_name=ZBED1;ID=stop_codon:HG00140_ch_T0000170;Name=ZBED1;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	2169580	2169582	.	-	0	source_transcript=ENST00000711172.1;source_transcript_name=ZBED1-211;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711172.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711172.1,ENST00000711172.1;transcript_id=HG00140_ch_T0000170;gene_id=HG00140_ch_G0000042;Parent=HG00140_ch_T0000170;transcript_name=HG00140_ch_T0000170;gene_name=ZBED1;ID=start_codon:HG00140_ch_T0000170;Name=ZBED1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2169636	2179683	.	-	.	source_transcript=ENST00000711172.1;source_transcript_name=ZBED1-211;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711172.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711172.1,ENST00000711172.1;transcript_id=HG00140_ch_T0000170;gene_id=HG00140_ch_G0000042;Parent=HG00140_ch_T0000170;transcript_name=HG00140_ch_T0000170;gene_name=ZBED1;ID=intron:HG00140_ch_T0000170:0;Name=ZBED1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2179684	2179834	.	-	.	source_transcript=ENST00000711172.1;source_transcript_name=ZBED1-211;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711172.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711172.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711172.1,ENST00000711172.1;transcript_id=HG00140_ch_T0000170;gene_id=HG00140_ch_G0000042;Parent=HG00140_ch_T0000170;transcript_name=HG00140_ch_T0000170;gene_name=ZBED1;ID=exon:HG00140_ch_T0000170:1;Name=ZBED1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2165282	2179834	100	-	.	source_transcript=ENST00000711173.1;source_transcript_name=ZBED1-212;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711173.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711173.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711173.1,ENST00000711173.1;transcript_id=HG00140_ch_T0000171;gene_id=HG00140_ch_G0000042;Parent=HG00140_ch_G0000042;transcript_name=HG00140_ch_T0000171;gene_name=ZBED1;ID=HG00140_ch_T0000171;Name=ZBED1
HG00140_chrY	CAT	exon	2165282	2169632	.	-	.	source_transcript=ENST00000711173.1;source_transcript_name=ZBED1-212;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711173.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711173.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711173.1,ENST00000711173.1;transcript_id=HG00140_ch_T0000171;gene_id=HG00140_ch_G0000042;Parent=HG00140_ch_T0000171;transcript_name=HG00140_ch_T0000171;gene_name=ZBED1;ID=exon:HG00140_ch_T0000171:0;Name=ZBED1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2167498	2169582	.	-	0	source_transcript=ENST00000711173.1;source_transcript_name=ZBED1-212;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711173.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711173.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711173.1,ENST00000711173.1;transcript_id=HG00140_ch_T0000171;gene_id=HG00140_ch_G0000042;Parent=HG00140_ch_T0000171;transcript_name=HG00140_ch_T0000171;gene_name=ZBED1;ID=CDS:HG00140_ch_T0000171:0;Name=ZBED1;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	2167498	2167500	.	-	0	source_transcript=ENST00000711173.1;source_transcript_name=ZBED1-212;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711173.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711173.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711173.1,ENST00000711173.1;transcript_id=HG00140_ch_T0000171;gene_id=HG00140_ch_G0000042;Parent=HG00140_ch_T0000171;transcript_name=HG00140_ch_T0000171;gene_name=ZBED1;ID=stop_codon:HG00140_ch_T0000171;Name=ZBED1;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	2169580	2169582	.	-	0	source_transcript=ENST00000711173.1;source_transcript_name=ZBED1-212;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711173.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711173.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711173.1,ENST00000711173.1;transcript_id=HG00140_ch_T0000171;gene_id=HG00140_ch_G0000042;Parent=HG00140_ch_T0000171;transcript_name=HG00140_ch_T0000171;gene_name=ZBED1;ID=start_codon:HG00140_ch_T0000171;Name=ZBED1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2169633	2179683	.	-	.	source_transcript=ENST00000711173.1;source_transcript_name=ZBED1-212;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711173.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711173.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711173.1,ENST00000711173.1;transcript_id=HG00140_ch_T0000171;gene_id=HG00140_ch_G0000042;Parent=HG00140_ch_T0000171;transcript_name=HG00140_ch_T0000171;gene_name=ZBED1;ID=intron:HG00140_ch_T0000171:0;Name=ZBED1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2179684	2179834	.	-	.	source_transcript=ENST00000711173.1;source_transcript_name=ZBED1-212;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711173.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711173.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711173.1,ENST00000711173.1;transcript_id=HG00140_ch_T0000171;gene_id=HG00140_ch_G0000042;Parent=HG00140_ch_T0000171;transcript_name=HG00140_ch_T0000171;gene_name=ZBED1;ID=exon:HG00140_ch_T0000171:1;Name=ZBED1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2165303	2179843	100	-	.	source_transcript=ENST00000711171.1;source_transcript_name=ZBED1-210;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711171.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711171.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711171.1,ENST00000711171.1;transcript_id=HG00140_ch_T0000172;gene_id=HG00140_ch_G0000042;Parent=HG00140_ch_G0000042;transcript_name=HG00140_ch_T0000172;gene_name=ZBED1;ID=HG00140_ch_T0000172;Name=ZBED1
HG00140_chrY	CAT	exon	2165303	2169635	.	-	.	source_transcript=ENST00000711171.1;source_transcript_name=ZBED1-210;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711171.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711171.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711171.1,ENST00000711171.1;transcript_id=HG00140_ch_T0000172;gene_id=HG00140_ch_G0000042;Parent=HG00140_ch_T0000172;transcript_name=HG00140_ch_T0000172;gene_name=ZBED1;ID=exon:HG00140_ch_T0000172:0;Name=ZBED1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2167498	2169582	.	-	0	source_transcript=ENST00000711171.1;source_transcript_name=ZBED1-210;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711171.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711171.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711171.1,ENST00000711171.1;transcript_id=HG00140_ch_T0000172;gene_id=HG00140_ch_G0000042;Parent=HG00140_ch_T0000172;transcript_name=HG00140_ch_T0000172;gene_name=ZBED1;ID=CDS:HG00140_ch_T0000172:0;Name=ZBED1;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	2167498	2167500	.	-	0	source_transcript=ENST00000711171.1;source_transcript_name=ZBED1-210;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711171.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711171.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711171.1,ENST00000711171.1;transcript_id=HG00140_ch_T0000172;gene_id=HG00140_ch_G0000042;Parent=HG00140_ch_T0000172;transcript_name=HG00140_ch_T0000172;gene_name=ZBED1;ID=stop_codon:HG00140_ch_T0000172;Name=ZBED1;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	2169580	2169582	.	-	0	source_transcript=ENST00000711171.1;source_transcript_name=ZBED1-210;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711171.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711171.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711171.1,ENST00000711171.1;transcript_id=HG00140_ch_T0000172;gene_id=HG00140_ch_G0000042;Parent=HG00140_ch_T0000172;transcript_name=HG00140_ch_T0000172;gene_name=ZBED1;ID=start_codon:HG00140_ch_T0000172;Name=ZBED1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2169636	2179683	.	-	.	source_transcript=ENST00000711171.1;source_transcript_name=ZBED1-210;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711171.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711171.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711171.1,ENST00000711171.1;transcript_id=HG00140_ch_T0000172;gene_id=HG00140_ch_G0000042;Parent=HG00140_ch_T0000172;transcript_name=HG00140_ch_T0000172;gene_name=ZBED1;ID=intron:HG00140_ch_T0000172:0;Name=ZBED1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2179684	2179843	.	-	.	source_transcript=ENST00000711171.1;source_transcript_name=ZBED1-210;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711171.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711171.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711171.1,ENST00000711171.1;transcript_id=HG00140_ch_T0000172;gene_id=HG00140_ch_G0000042;Parent=HG00140_ch_T0000172;transcript_name=HG00140_ch_T0000172;gene_name=ZBED1;ID=exon:HG00140_ch_T0000172:1;Name=ZBED1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2165850	2167834	1000	-	.	source_transcript=ENST00000711170.1;source_transcript_name=ZBED1-209;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711170.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711170.1;transcript_score=298.122;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711170.1,ENST00000711170.1;transcript_id=HG00140_ch_T0000173;gene_id=HG00140_ch_G0000042;Parent=HG00140_ch_G0000042;transcript_name=HG00140_ch_T0000173;gene_name=ZBED1;ID=HG00140_ch_T0000173;Name=ZBED1
HG00140_chrY	CAT	exon	2165850	2166565	.	-	.	source_transcript=ENST00000711170.1;source_transcript_name=ZBED1-209;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711170.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711170.1;transcript_score=298.122;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711170.1,ENST00000711170.1;transcript_id=HG00140_ch_T0000173;gene_id=HG00140_ch_G0000042;Parent=HG00140_ch_T0000173;transcript_name=HG00140_ch_T0000173;gene_name=ZBED1;ID=exon:HG00140_ch_T0000173:0;Name=ZBED1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2166566	2167650	.	-	.	source_transcript=ENST00000711170.1;source_transcript_name=ZBED1-209;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711170.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711170.1;transcript_score=298.122;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711170.1,ENST00000711170.1;transcript_id=HG00140_ch_T0000173;gene_id=HG00140_ch_G0000042;Parent=HG00140_ch_T0000173;transcript_name=HG00140_ch_T0000173;gene_name=ZBED1;ID=intron:HG00140_ch_T0000173:0;Name=ZBED1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2167651	2167834	.	-	.	source_transcript=ENST00000711170.1;source_transcript_name=ZBED1-209;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711170.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711170.1;transcript_score=298.122;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711170.1,ENST00000711170.1;transcript_id=HG00140_ch_T0000173;gene_id=HG00140_ch_G0000042;Parent=HG00140_ch_T0000173;transcript_name=HG00140_ch_T0000173;gene_name=ZBED1;ID=exon:HG00140_ch_T0000173:1;Name=ZBED1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2167049	2179421	100	-	.	source_transcript=ENST00000711169.1;source_transcript_name=ZBED1-208;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711169.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711169.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711169.1,ENST00000711169.1;transcript_id=HG00140_ch_T0000174;gene_id=HG00140_ch_G0000042;Parent=HG00140_ch_G0000042;transcript_name=HG00140_ch_T0000174;gene_name=ZBED1;ID=HG00140_ch_T0000174;Name=ZBED1
HG00140_chrY	CAT	exon	2167049	2169635	.	-	.	source_transcript=ENST00000711169.1;source_transcript_name=ZBED1-208;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711169.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711169.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711169.1,ENST00000711169.1;transcript_id=HG00140_ch_T0000174;gene_id=HG00140_ch_G0000042;Parent=HG00140_ch_T0000174;transcript_name=HG00140_ch_T0000174;gene_name=ZBED1;ID=exon:HG00140_ch_T0000174:0;Name=ZBED1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2167498	2169582	.	-	0	source_transcript=ENST00000711169.1;source_transcript_name=ZBED1-208;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711169.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711169.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711169.1,ENST00000711169.1;transcript_id=HG00140_ch_T0000174;gene_id=HG00140_ch_G0000042;Parent=HG00140_ch_T0000174;transcript_name=HG00140_ch_T0000174;gene_name=ZBED1;ID=CDS:HG00140_ch_T0000174:0;Name=ZBED1;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	2167498	2167500	.	-	0	source_transcript=ENST00000711169.1;source_transcript_name=ZBED1-208;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711169.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711169.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711169.1,ENST00000711169.1;transcript_id=HG00140_ch_T0000174;gene_id=HG00140_ch_G0000042;Parent=HG00140_ch_T0000174;transcript_name=HG00140_ch_T0000174;gene_name=ZBED1;ID=stop_codon:HG00140_ch_T0000174;Name=ZBED1;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	2169580	2169582	.	-	0	source_transcript=ENST00000711169.1;source_transcript_name=ZBED1-208;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711169.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711169.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711169.1,ENST00000711169.1;transcript_id=HG00140_ch_T0000174;gene_id=HG00140_ch_G0000042;Parent=HG00140_ch_T0000174;transcript_name=HG00140_ch_T0000174;gene_name=ZBED1;ID=start_codon:HG00140_ch_T0000174;Name=ZBED1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2169636	2179176	.	-	.	source_transcript=ENST00000711169.1;source_transcript_name=ZBED1-208;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711169.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711169.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711169.1,ENST00000711169.1;transcript_id=HG00140_ch_T0000174;gene_id=HG00140_ch_G0000042;Parent=HG00140_ch_T0000174;transcript_name=HG00140_ch_T0000174;gene_name=ZBED1;ID=intron:HG00140_ch_T0000174:0;Name=ZBED1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2179177	2179421	.	-	.	source_transcript=ENST00000711169.1;source_transcript_name=ZBED1-208;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711169.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711169.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711169.1,ENST00000711169.1;transcript_id=HG00140_ch_T0000174;gene_id=HG00140_ch_G0000042;Parent=HG00140_ch_T0000174;transcript_name=HG00140_ch_T0000174;gene_name=ZBED1;ID=exon:HG00140_ch_T0000174:1;Name=ZBED1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2168768	2179762	100	-	.	source_transcript=ENST00000711168.1;source_transcript_name=ZBED1-207;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711168.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711168.1,ENST00000711168.1;transcript_id=HG00140_ch_T0000175;gene_id=HG00140_ch_G0000042;Parent=HG00140_ch_G0000042;transcript_name=HG00140_ch_T0000175;gene_name=ZBED1;ID=HG00140_ch_T0000175;Name=ZBED1
HG00140_chrY	CAT	exon	2168768	2169635	.	-	.	source_transcript=ENST00000711168.1;source_transcript_name=ZBED1-207;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711168.1,ENST00000711168.1;transcript_id=HG00140_ch_T0000175;gene_id=HG00140_ch_G0000042;Parent=HG00140_ch_T0000175;transcript_name=HG00140_ch_T0000175;gene_name=ZBED1;ID=exon:HG00140_ch_T0000175:0;Name=ZBED1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2168768	2169582	.	-	0	source_transcript=ENST00000711168.1;source_transcript_name=ZBED1-207;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711168.1,ENST00000711168.1;transcript_id=HG00140_ch_T0000175;gene_id=HG00140_ch_G0000042;Parent=HG00140_ch_T0000175;transcript_name=HG00140_ch_T0000175;gene_name=ZBED1;ID=CDS:HG00140_ch_T0000175:0;Name=ZBED1;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	2169580	2169582	.	-	0	source_transcript=ENST00000711168.1;source_transcript_name=ZBED1-207;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711168.1,ENST00000711168.1;transcript_id=HG00140_ch_T0000175;gene_id=HG00140_ch_G0000042;Parent=HG00140_ch_T0000175;transcript_name=HG00140_ch_T0000175;gene_name=ZBED1;ID=start_codon:HG00140_ch_T0000175;Name=ZBED1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2169636	2179683	.	-	.	source_transcript=ENST00000711168.1;source_transcript_name=ZBED1-207;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711168.1,ENST00000711168.1;transcript_id=HG00140_ch_T0000175;gene_id=HG00140_ch_G0000042;Parent=HG00140_ch_T0000175;transcript_name=HG00140_ch_T0000175;gene_name=ZBED1;ID=intron:HG00140_ch_T0000175:0;Name=ZBED1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2179684	2179762	.	-	.	source_transcript=ENST00000711168.1;source_transcript_name=ZBED1-207;source_gene=ENSG00000292345.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292345.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=ENST00000711168.1,ENST00000711168.1;transcript_id=HG00140_ch_T0000175;gene_id=HG00140_ch_G0000042;Parent=HG00140_ch_T0000175;transcript_name=HG00140_ch_T0000175;gene_name=ZBED1;ID=exon:HG00140_ch_T0000175:1;Name=ZBED1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	2179111	2181980	.	+	.	source_gene_common_name=ENSG00000310551;source_gene=ENSG00000310551.1;alternative_source_transcripts=ENST00000850727.1,ENST00000850727.1;gene_id=HG00140_ch_G0000043;gene_biotype=lncRNA;gene_name=ENSG00000310551;gene_sources=liftoff;ID=HG00140_ch_G0000043;Name=ENSG00000310551
HG00140_chrY	CAT	transcript	2179111	2181980	1000	+	.	source_transcript=ENST00000850727.1;source_transcript_name=ENST00000850727;source_gene=ENSG00000310551.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310551.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850727.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310551;alternative_source_transcripts=ENST00000850727.1,ENST00000850727.1;transcript_id=HG00140_ch_T0000176;gene_id=HG00140_ch_G0000043;Parent=HG00140_ch_G0000043;transcript_name=HG00140_ch_T0000176;gene_name=ENSG00000310551;ID=HG00140_ch_T0000176;Name=ENSG00000310551
HG00140_chrY	CAT	exon	2179111	2179182	.	+	.	source_transcript=ENST00000850727.1;source_transcript_name=ENST00000850727;source_gene=ENSG00000310551.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310551.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850727.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310551;alternative_source_transcripts=ENST00000850727.1,ENST00000850727.1;transcript_id=HG00140_ch_T0000176;gene_id=HG00140_ch_G0000043;Parent=HG00140_ch_T0000176;transcript_name=HG00140_ch_T0000176;gene_name=ENSG00000310551;ID=exon:HG00140_ch_T0000176:0;Name=ENSG00000310551;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2179183	2181680	.	+	.	source_transcript=ENST00000850727.1;source_transcript_name=ENST00000850727;source_gene=ENSG00000310551.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310551.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850727.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310551;alternative_source_transcripts=ENST00000850727.1,ENST00000850727.1;transcript_id=HG00140_ch_T0000176;gene_id=HG00140_ch_G0000043;Parent=HG00140_ch_T0000176;transcript_name=HG00140_ch_T0000176;gene_name=ENSG00000310551;ID=intron:HG00140_ch_T0000176:0;Name=ENSG00000310551;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2181681	2181980	.	+	.	source_transcript=ENST00000850727.1;source_transcript_name=ENST00000850727;source_gene=ENSG00000310551.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310551.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850727.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310551;alternative_source_transcripts=ENST00000850727.1,ENST00000850727.1;transcript_id=HG00140_ch_T0000176;gene_id=HG00140_ch_G0000043;Parent=HG00140_ch_T0000176;transcript_name=HG00140_ch_T0000176;gene_name=ENSG00000310551;ID=exon:HG00140_ch_T0000176:1;Name=ENSG00000310551;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	2244893	2288546	.	-	.	source_gene_common_name=LINC03112;source_gene=ENSG00000292360.2;alternative_source_transcripts=ENST00000850835.1,ENST00000850835.1;gene_id=HG00140_ch_G0000044;gene_biotype=lncRNA;gene_name=LINC03112;gene_sources=liftoff;ID=HG00140_ch_G0000044;Name=LINC03112
HG00140_chrY	CAT	transcript	2244893	2288546	1000	-	.	source_transcript=ENST00000850835.1;source_transcript_name=LINC03112-257;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850835.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850835.1,ENST00000850835.1;transcript_id=HG00140_ch_T0000177;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_G0000044;transcript_name=HG00140_ch_T0000177;gene_name=LINC03112;ID=HG00140_ch_T0000177;Name=LINC03112
HG00140_chrY	CAT	exon	2244893	2246163	.	-	.	source_transcript=ENST00000850835.1;source_transcript_name=LINC03112-257;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850835.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850835.1,ENST00000850835.1;transcript_id=HG00140_ch_T0000177;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000177;transcript_name=HG00140_ch_T0000177;gene_name=LINC03112;ID=exon:HG00140_ch_T0000177:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2246164	2288359	.	-	.	source_transcript=ENST00000850835.1;source_transcript_name=LINC03112-257;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850835.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850835.1,ENST00000850835.1;transcript_id=HG00140_ch_T0000177;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000177;transcript_name=HG00140_ch_T0000177;gene_name=LINC03112;ID=intron:HG00140_ch_T0000177:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2288360	2288546	.	-	.	source_transcript=ENST00000850835.1;source_transcript_name=LINC03112-257;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850835.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850835.1,ENST00000850835.1;transcript_id=HG00140_ch_T0000177;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000177;transcript_name=HG00140_ch_T0000177;gene_name=LINC03112;ID=exon:HG00140_ch_T0000177:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2244895	2288459	1000	-	.	source_transcript=ENST00000850842.1;source_transcript_name=LINC03112-262;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850842.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850842.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850842.1,ENST00000850842.1;transcript_id=HG00140_ch_T0000178;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_G0000044;transcript_name=HG00140_ch_T0000178;gene_name=LINC03112;ID=HG00140_ch_T0000178;Name=LINC03112
HG00140_chrY	CAT	exon	2244895	2246163	.	-	.	source_transcript=ENST00000850842.1;source_transcript_name=LINC03112-262;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850842.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850842.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850842.1,ENST00000850842.1;transcript_id=HG00140_ch_T0000178;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000178;transcript_name=HG00140_ch_T0000178;gene_name=LINC03112;ID=exon:HG00140_ch_T0000178:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2246164	2248881	.	-	.	source_transcript=ENST00000850842.1;source_transcript_name=LINC03112-262;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850842.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850842.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850842.1,ENST00000850842.1;transcript_id=HG00140_ch_T0000178;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000178;transcript_name=HG00140_ch_T0000178;gene_name=LINC03112;ID=intron:HG00140_ch_T0000178:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2248882	2249037	.	-	.	source_transcript=ENST00000850842.1;source_transcript_name=LINC03112-262;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850842.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850842.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850842.1,ENST00000850842.1;transcript_id=HG00140_ch_T0000178;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000178;transcript_name=HG00140_ch_T0000178;gene_name=LINC03112;ID=exon:HG00140_ch_T0000178:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2249038	2288359	.	-	.	source_transcript=ENST00000850842.1;source_transcript_name=LINC03112-262;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850842.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850842.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850842.1,ENST00000850842.1;transcript_id=HG00140_ch_T0000178;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000178;transcript_name=HG00140_ch_T0000178;gene_name=LINC03112;ID=intron:HG00140_ch_T0000178:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2288360	2288459	.	-	.	source_transcript=ENST00000850842.1;source_transcript_name=LINC03112-262;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850842.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850842.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850842.1,ENST00000850842.1;transcript_id=HG00140_ch_T0000178;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000178;transcript_name=HG00140_ch_T0000178;gene_name=LINC03112;ID=exon:HG00140_ch_T0000178:2;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2244896	2288446	1000	-	.	source_transcript=ENST00000850797.1;source_transcript_name=LINC03112-236;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850797.1;transcript_score=299.777;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850797.1,ENST00000850797.1;transcript_id=HG00140_ch_T0000179;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_G0000044;transcript_name=HG00140_ch_T0000179;gene_name=LINC03112;ID=HG00140_ch_T0000179;Name=LINC03112
HG00140_chrY	CAT	exon	2244896	2246163	.	-	.	source_transcript=ENST00000850797.1;source_transcript_name=LINC03112-236;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850797.1;transcript_score=299.777;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850797.1,ENST00000850797.1;transcript_id=HG00140_ch_T0000179;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000179;transcript_name=HG00140_ch_T0000179;gene_name=LINC03112;ID=exon:HG00140_ch_T0000179:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2246164	2248881	.	-	.	source_transcript=ENST00000850797.1;source_transcript_name=LINC03112-236;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850797.1;transcript_score=299.777;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850797.1,ENST00000850797.1;transcript_id=HG00140_ch_T0000179;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000179;transcript_name=HG00140_ch_T0000179;gene_name=LINC03112;ID=intron:HG00140_ch_T0000179:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2248882	2249037	.	-	.	source_transcript=ENST00000850797.1;source_transcript_name=LINC03112-236;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850797.1;transcript_score=299.777;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850797.1,ENST00000850797.1;transcript_id=HG00140_ch_T0000179;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000179;transcript_name=HG00140_ch_T0000179;gene_name=LINC03112;ID=exon:HG00140_ch_T0000179:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2249038	2284253	.	-	.	source_transcript=ENST00000850797.1;source_transcript_name=LINC03112-236;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850797.1;transcript_score=299.777;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850797.1,ENST00000850797.1;transcript_id=HG00140_ch_T0000179;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000179;transcript_name=HG00140_ch_T0000179;gene_name=LINC03112;ID=intron:HG00140_ch_T0000179:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2284254	2284535	.	-	.	source_transcript=ENST00000850797.1;source_transcript_name=LINC03112-236;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850797.1;transcript_score=299.777;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850797.1,ENST00000850797.1;transcript_id=HG00140_ch_T0000179;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000179;transcript_name=HG00140_ch_T0000179;gene_name=LINC03112;ID=exon:HG00140_ch_T0000179:2;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2284536	2288359	.	-	.	source_transcript=ENST00000850797.1;source_transcript_name=LINC03112-236;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850797.1;transcript_score=299.777;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850797.1,ENST00000850797.1;transcript_id=HG00140_ch_T0000179;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000179;transcript_name=HG00140_ch_T0000179;gene_name=LINC03112;ID=intron:HG00140_ch_T0000179:2;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2288360	2288446	.	-	.	source_transcript=ENST00000850797.1;source_transcript_name=LINC03112-236;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850797.1;transcript_score=299.777;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850797.1,ENST00000850797.1;transcript_id=HG00140_ch_T0000179;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000179;transcript_name=HG00140_ch_T0000179;gene_name=LINC03112;ID=exon:HG00140_ch_T0000179:3;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2244896	2288465	1000	-	.	source_transcript=ENST00000850837.1;source_transcript_name=LINC03112-258;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850837.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850837.1,ENST00000850837.1;transcript_id=HG00140_ch_T0000180;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_G0000044;transcript_name=HG00140_ch_T0000180;gene_name=LINC03112;ID=HG00140_ch_T0000180;Name=LINC03112
HG00140_chrY	CAT	exon	2244896	2246163	.	-	.	source_transcript=ENST00000850837.1;source_transcript_name=LINC03112-258;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850837.1,ENST00000850837.1;transcript_id=HG00140_ch_T0000180;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000180;transcript_name=HG00140_ch_T0000180;gene_name=LINC03112;ID=exon:HG00140_ch_T0000180:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2246164	2248881	.	-	.	source_transcript=ENST00000850837.1;source_transcript_name=LINC03112-258;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850837.1,ENST00000850837.1;transcript_id=HG00140_ch_T0000180;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000180;transcript_name=HG00140_ch_T0000180;gene_name=LINC03112;ID=intron:HG00140_ch_T0000180:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2248882	2249037	.	-	.	source_transcript=ENST00000850837.1;source_transcript_name=LINC03112-258;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850837.1,ENST00000850837.1;transcript_id=HG00140_ch_T0000180;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000180;transcript_name=HG00140_ch_T0000180;gene_name=LINC03112;ID=exon:HG00140_ch_T0000180:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2249038	2252966	.	-	.	source_transcript=ENST00000850837.1;source_transcript_name=LINC03112-258;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850837.1,ENST00000850837.1;transcript_id=HG00140_ch_T0000180;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000180;transcript_name=HG00140_ch_T0000180;gene_name=LINC03112;ID=intron:HG00140_ch_T0000180:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2252967	2253160	.	-	.	source_transcript=ENST00000850837.1;source_transcript_name=LINC03112-258;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850837.1,ENST00000850837.1;transcript_id=HG00140_ch_T0000180;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000180;transcript_name=HG00140_ch_T0000180;gene_name=LINC03112;ID=exon:HG00140_ch_T0000180:2;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2253161	2288359	.	-	.	source_transcript=ENST00000850837.1;source_transcript_name=LINC03112-258;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850837.1,ENST00000850837.1;transcript_id=HG00140_ch_T0000180;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000180;transcript_name=HG00140_ch_T0000180;gene_name=LINC03112;ID=intron:HG00140_ch_T0000180:2;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2288360	2288465	.	-	.	source_transcript=ENST00000850837.1;source_transcript_name=LINC03112-258;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850837.1,ENST00000850837.1;transcript_id=HG00140_ch_T0000180;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000180;transcript_name=HG00140_ch_T0000180;gene_name=LINC03112;ID=exon:HG00140_ch_T0000180:3;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2244897	2288421	1000	-	.	source_transcript=ENST00000850805.1;source_transcript_name=LINC03112-244;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850805.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850805.1,ENST00000850805.1;transcript_id=HG00140_ch_T0000181;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_G0000044;transcript_name=HG00140_ch_T0000181;gene_name=LINC03112;ID=HG00140_ch_T0000181;Name=LINC03112
HG00140_chrY	CAT	exon	2244897	2245516	.	-	.	source_transcript=ENST00000850805.1;source_transcript_name=LINC03112-244;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850805.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850805.1,ENST00000850805.1;transcript_id=HG00140_ch_T0000181;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000181;transcript_name=HG00140_ch_T0000181;gene_name=LINC03112;ID=exon:HG00140_ch_T0000181:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2245517	2245955	.	-	.	source_transcript=ENST00000850805.1;source_transcript_name=LINC03112-244;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850805.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850805.1,ENST00000850805.1;transcript_id=HG00140_ch_T0000181;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000181;transcript_name=HG00140_ch_T0000181;gene_name=LINC03112;ID=intron:HG00140_ch_T0000181:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2245956	2246163	.	-	.	source_transcript=ENST00000850805.1;source_transcript_name=LINC03112-244;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850805.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850805.1,ENST00000850805.1;transcript_id=HG00140_ch_T0000181;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000181;transcript_name=HG00140_ch_T0000181;gene_name=LINC03112;ID=exon:HG00140_ch_T0000181:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2246164	2248881	.	-	.	source_transcript=ENST00000850805.1;source_transcript_name=LINC03112-244;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850805.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850805.1,ENST00000850805.1;transcript_id=HG00140_ch_T0000181;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000181;transcript_name=HG00140_ch_T0000181;gene_name=LINC03112;ID=intron:HG00140_ch_T0000181:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2248882	2248969	.	-	.	source_transcript=ENST00000850805.1;source_transcript_name=LINC03112-244;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850805.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850805.1,ENST00000850805.1;transcript_id=HG00140_ch_T0000181;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000181;transcript_name=HG00140_ch_T0000181;gene_name=LINC03112;ID=exon:HG00140_ch_T0000181:2;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2248970	2288359	.	-	.	source_transcript=ENST00000850805.1;source_transcript_name=LINC03112-244;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850805.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850805.1,ENST00000850805.1;transcript_id=HG00140_ch_T0000181;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000181;transcript_name=HG00140_ch_T0000181;gene_name=LINC03112;ID=intron:HG00140_ch_T0000181:2;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2288360	2288421	.	-	.	source_transcript=ENST00000850805.1;source_transcript_name=LINC03112-244;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850805.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850805.1,ENST00000850805.1;transcript_id=HG00140_ch_T0000181;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000181;transcript_name=HG00140_ch_T0000181;gene_name=LINC03112;ID=exon:HG00140_ch_T0000181:3;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2244898	2288445	1000	-	.	source_transcript=ENST00000711240.1;source_transcript_name=LINC03112-233;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711240.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711240.1,ENST00000711240.1;transcript_id=HG00140_ch_T0000182;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_G0000044;transcript_name=HG00140_ch_T0000182;gene_name=LINC03112;ID=HG00140_ch_T0000182;Name=LINC03112
HG00140_chrY	CAT	exon	2244898	2246163	.	-	.	source_transcript=ENST00000711240.1;source_transcript_name=LINC03112-233;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711240.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711240.1,ENST00000711240.1;transcript_id=HG00140_ch_T0000182;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000182;transcript_name=HG00140_ch_T0000182;gene_name=LINC03112;ID=exon:HG00140_ch_T0000182:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2246164	2276554	.	-	.	source_transcript=ENST00000711240.1;source_transcript_name=LINC03112-233;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711240.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711240.1,ENST00000711240.1;transcript_id=HG00140_ch_T0000182;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000182;transcript_name=HG00140_ch_T0000182;gene_name=LINC03112;ID=intron:HG00140_ch_T0000182:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2276555	2276712	.	-	.	source_transcript=ENST00000711240.1;source_transcript_name=LINC03112-233;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711240.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711240.1,ENST00000711240.1;transcript_id=HG00140_ch_T0000182;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000182;transcript_name=HG00140_ch_T0000182;gene_name=LINC03112;ID=exon:HG00140_ch_T0000182:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2276713	2288359	.	-	.	source_transcript=ENST00000711240.1;source_transcript_name=LINC03112-233;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711240.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711240.1,ENST00000711240.1;transcript_id=HG00140_ch_T0000182;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000182;transcript_name=HG00140_ch_T0000182;gene_name=LINC03112;ID=intron:HG00140_ch_T0000182:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2288360	2288445	.	-	.	source_transcript=ENST00000711240.1;source_transcript_name=LINC03112-233;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711240.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711240.1,ENST00000711240.1;transcript_id=HG00140_ch_T0000182;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000182;transcript_name=HG00140_ch_T0000182;gene_name=LINC03112;ID=exon:HG00140_ch_T0000182:2;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2244898	2288422	1000	-	.	source_transcript=ENST00000850671.1;source_transcript_name=LINC03112-234;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850671.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850671.1,ENST00000850671.1;transcript_id=HG00140_ch_T0000183;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_G0000044;transcript_name=HG00140_ch_T0000183;gene_name=LINC03112;ID=HG00140_ch_T0000183;Name=LINC03112
HG00140_chrY	CAT	exon	2244898	2246163	.	-	.	source_transcript=ENST00000850671.1;source_transcript_name=LINC03112-234;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850671.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850671.1,ENST00000850671.1;transcript_id=HG00140_ch_T0000183;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000183;transcript_name=HG00140_ch_T0000183;gene_name=LINC03112;ID=exon:HG00140_ch_T0000183:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2246164	2248881	.	-	.	source_transcript=ENST00000850671.1;source_transcript_name=LINC03112-234;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850671.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850671.1,ENST00000850671.1;transcript_id=HG00140_ch_T0000183;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000183;transcript_name=HG00140_ch_T0000183;gene_name=LINC03112;ID=intron:HG00140_ch_T0000183:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2248882	2248969	.	-	.	source_transcript=ENST00000850671.1;source_transcript_name=LINC03112-234;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850671.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850671.1,ENST00000850671.1;transcript_id=HG00140_ch_T0000183;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000183;transcript_name=HG00140_ch_T0000183;gene_name=LINC03112;ID=exon:HG00140_ch_T0000183:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2248970	2252983	.	-	.	source_transcript=ENST00000850671.1;source_transcript_name=LINC03112-234;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850671.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850671.1,ENST00000850671.1;transcript_id=HG00140_ch_T0000183;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000183;transcript_name=HG00140_ch_T0000183;gene_name=LINC03112;ID=intron:HG00140_ch_T0000183:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2252984	2253160	.	-	.	source_transcript=ENST00000850671.1;source_transcript_name=LINC03112-234;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850671.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850671.1,ENST00000850671.1;transcript_id=HG00140_ch_T0000183;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000183;transcript_name=HG00140_ch_T0000183;gene_name=LINC03112;ID=exon:HG00140_ch_T0000183:2;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2253161	2288359	.	-	.	source_transcript=ENST00000850671.1;source_transcript_name=LINC03112-234;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850671.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850671.1,ENST00000850671.1;transcript_id=HG00140_ch_T0000183;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000183;transcript_name=HG00140_ch_T0000183;gene_name=LINC03112;ID=intron:HG00140_ch_T0000183:2;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2288360	2288422	.	-	.	source_transcript=ENST00000850671.1;source_transcript_name=LINC03112-234;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850671.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850671.1,ENST00000850671.1;transcript_id=HG00140_ch_T0000183;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000183;transcript_name=HG00140_ch_T0000183;gene_name=LINC03112;ID=exon:HG00140_ch_T0000183:3;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2244898	2288450	1000	-	.	source_transcript=ENST00000850796.1;source_transcript_name=LINC03112-235;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850796.1;transcript_score=299.756;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850796.1,ENST00000850796.1;transcript_id=HG00140_ch_T0000184;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_G0000044;transcript_name=HG00140_ch_T0000184;gene_name=LINC03112;ID=HG00140_ch_T0000184;Name=LINC03112
HG00140_chrY	CAT	exon	2244898	2246163	.	-	.	source_transcript=ENST00000850796.1;source_transcript_name=LINC03112-235;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850796.1;transcript_score=299.756;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850796.1,ENST00000850796.1;transcript_id=HG00140_ch_T0000184;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000184;transcript_name=HG00140_ch_T0000184;gene_name=LINC03112;ID=exon:HG00140_ch_T0000184:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2246164	2284253	.	-	.	source_transcript=ENST00000850796.1;source_transcript_name=LINC03112-235;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850796.1;transcript_score=299.756;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850796.1,ENST00000850796.1;transcript_id=HG00140_ch_T0000184;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000184;transcript_name=HG00140_ch_T0000184;gene_name=LINC03112;ID=intron:HG00140_ch_T0000184:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2284254	2284535	.	-	.	source_transcript=ENST00000850796.1;source_transcript_name=LINC03112-235;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850796.1;transcript_score=299.756;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850796.1,ENST00000850796.1;transcript_id=HG00140_ch_T0000184;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000184;transcript_name=HG00140_ch_T0000184;gene_name=LINC03112;ID=exon:HG00140_ch_T0000184:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2284536	2288359	.	-	.	source_transcript=ENST00000850796.1;source_transcript_name=LINC03112-235;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850796.1;transcript_score=299.756;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850796.1,ENST00000850796.1;transcript_id=HG00140_ch_T0000184;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000184;transcript_name=HG00140_ch_T0000184;gene_name=LINC03112;ID=intron:HG00140_ch_T0000184:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2288360	2288450	.	-	.	source_transcript=ENST00000850796.1;source_transcript_name=LINC03112-235;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850796.1;transcript_score=299.756;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850796.1,ENST00000850796.1;transcript_id=HG00140_ch_T0000184;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000184;transcript_name=HG00140_ch_T0000184;gene_name=LINC03112;ID=exon:HG00140_ch_T0000184:2;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2244898	2288448	1000	-	.	source_transcript=ENST00000850798.1;source_transcript_name=LINC03112-237;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850798.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850798.1,ENST00000850798.1;transcript_id=HG00140_ch_T0000185;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_G0000044;transcript_name=HG00140_ch_T0000185;gene_name=LINC03112;ID=HG00140_ch_T0000185;Name=LINC03112
HG00140_chrY	CAT	exon	2244898	2246163	.	-	.	source_transcript=ENST00000850798.1;source_transcript_name=LINC03112-237;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850798.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850798.1,ENST00000850798.1;transcript_id=HG00140_ch_T0000185;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000185;transcript_name=HG00140_ch_T0000185;gene_name=LINC03112;ID=exon:HG00140_ch_T0000185:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2246164	2248881	.	-	.	source_transcript=ENST00000850798.1;source_transcript_name=LINC03112-237;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850798.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850798.1,ENST00000850798.1;transcript_id=HG00140_ch_T0000185;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000185;transcript_name=HG00140_ch_T0000185;gene_name=LINC03112;ID=intron:HG00140_ch_T0000185:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2248882	2249037	.	-	.	source_transcript=ENST00000850798.1;source_transcript_name=LINC03112-237;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850798.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850798.1,ENST00000850798.1;transcript_id=HG00140_ch_T0000185;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000185;transcript_name=HG00140_ch_T0000185;gene_name=LINC03112;ID=exon:HG00140_ch_T0000185:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2249038	2253068	.	-	.	source_transcript=ENST00000850798.1;source_transcript_name=LINC03112-237;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850798.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850798.1,ENST00000850798.1;transcript_id=HG00140_ch_T0000185;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000185;transcript_name=HG00140_ch_T0000185;gene_name=LINC03112;ID=intron:HG00140_ch_T0000185:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2253069	2253160	.	-	.	source_transcript=ENST00000850798.1;source_transcript_name=LINC03112-237;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850798.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850798.1,ENST00000850798.1;transcript_id=HG00140_ch_T0000185;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000185;transcript_name=HG00140_ch_T0000185;gene_name=LINC03112;ID=exon:HG00140_ch_T0000185:2;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2253161	2288359	.	-	.	source_transcript=ENST00000850798.1;source_transcript_name=LINC03112-237;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850798.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850798.1,ENST00000850798.1;transcript_id=HG00140_ch_T0000185;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000185;transcript_name=HG00140_ch_T0000185;gene_name=LINC03112;ID=intron:HG00140_ch_T0000185:2;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2288360	2288448	.	-	.	source_transcript=ENST00000850798.1;source_transcript_name=LINC03112-237;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850798.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850798.1,ENST00000850798.1;transcript_id=HG00140_ch_T0000185;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000185;transcript_name=HG00140_ch_T0000185;gene_name=LINC03112;ID=exon:HG00140_ch_T0000185:3;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2244898	2288432	1000	-	.	source_transcript=ENST00000850802.1;source_transcript_name=LINC03112-241;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850802.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850802.1,ENST00000850802.1;transcript_id=HG00140_ch_T0000186;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_G0000044;transcript_name=HG00140_ch_T0000186;gene_name=LINC03112;ID=HG00140_ch_T0000186;Name=LINC03112
HG00140_chrY	CAT	exon	2244898	2245019	.	-	.	source_transcript=ENST00000850802.1;source_transcript_name=LINC03112-241;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850802.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850802.1,ENST00000850802.1;transcript_id=HG00140_ch_T0000186;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000186;transcript_name=HG00140_ch_T0000186;gene_name=LINC03112;ID=exon:HG00140_ch_T0000186:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2245020	2245955	.	-	.	source_transcript=ENST00000850802.1;source_transcript_name=LINC03112-241;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850802.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850802.1,ENST00000850802.1;transcript_id=HG00140_ch_T0000186;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000186;transcript_name=HG00140_ch_T0000186;gene_name=LINC03112;ID=intron:HG00140_ch_T0000186:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2245956	2246163	.	-	.	source_transcript=ENST00000850802.1;source_transcript_name=LINC03112-241;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850802.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850802.1,ENST00000850802.1;transcript_id=HG00140_ch_T0000186;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000186;transcript_name=HG00140_ch_T0000186;gene_name=LINC03112;ID=exon:HG00140_ch_T0000186:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2246164	2288359	.	-	.	source_transcript=ENST00000850802.1;source_transcript_name=LINC03112-241;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850802.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850802.1,ENST00000850802.1;transcript_id=HG00140_ch_T0000186;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000186;transcript_name=HG00140_ch_T0000186;gene_name=LINC03112;ID=intron:HG00140_ch_T0000186:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2288360	2288432	.	-	.	source_transcript=ENST00000850802.1;source_transcript_name=LINC03112-241;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850802.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850802.1,ENST00000850802.1;transcript_id=HG00140_ch_T0000186;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000186;transcript_name=HG00140_ch_T0000186;gene_name=LINC03112;ID=exon:HG00140_ch_T0000186:2;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2244898	2288415	1000	-	.	source_transcript=ENST00000850809.1;source_transcript_name=LINC03112-248;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850809.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850809.1,ENST00000850809.1;transcript_id=HG00140_ch_T0000187;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_G0000044;transcript_name=HG00140_ch_T0000187;gene_name=LINC03112;ID=HG00140_ch_T0000187;Name=LINC03112
HG00140_chrY	CAT	exon	2244898	2246163	.	-	.	source_transcript=ENST00000850809.1;source_transcript_name=LINC03112-248;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850809.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850809.1,ENST00000850809.1;transcript_id=HG00140_ch_T0000187;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000187;transcript_name=HG00140_ch_T0000187;gene_name=LINC03112;ID=exon:HG00140_ch_T0000187:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2246164	2288279	.	-	.	source_transcript=ENST00000850809.1;source_transcript_name=LINC03112-248;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850809.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850809.1,ENST00000850809.1;transcript_id=HG00140_ch_T0000187;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000187;transcript_name=HG00140_ch_T0000187;gene_name=LINC03112;ID=intron:HG00140_ch_T0000187:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2288280	2288415	.	-	.	source_transcript=ENST00000850809.1;source_transcript_name=LINC03112-248;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850809.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850809.1,ENST00000850809.1;transcript_id=HG00140_ch_T0000187;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000187;transcript_name=HG00140_ch_T0000187;gene_name=LINC03112;ID=exon:HG00140_ch_T0000187:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2244898	2263245	1000	-	.	source_transcript=ENST00000850812.1;source_transcript_name=LINC03112-251;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850812.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850812.1,ENST00000850812.1;transcript_id=HG00140_ch_T0000188;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_G0000044;transcript_name=HG00140_ch_T0000188;gene_name=LINC03112;ID=HG00140_ch_T0000188;Name=LINC03112
HG00140_chrY	CAT	exon	2244898	2246163	.	-	.	source_transcript=ENST00000850812.1;source_transcript_name=LINC03112-251;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850812.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850812.1,ENST00000850812.1;transcript_id=HG00140_ch_T0000188;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000188;transcript_name=HG00140_ch_T0000188;gene_name=LINC03112;ID=exon:HG00140_ch_T0000188:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2246164	2263107	.	-	.	source_transcript=ENST00000850812.1;source_transcript_name=LINC03112-251;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850812.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850812.1,ENST00000850812.1;transcript_id=HG00140_ch_T0000188;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000188;transcript_name=HG00140_ch_T0000188;gene_name=LINC03112;ID=intron:HG00140_ch_T0000188:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2263108	2263245	.	-	.	source_transcript=ENST00000850812.1;source_transcript_name=LINC03112-251;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850812.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850812.1,ENST00000850812.1;transcript_id=HG00140_ch_T0000188;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000188;transcript_name=HG00140_ch_T0000188;gene_name=LINC03112;ID=exon:HG00140_ch_T0000188:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2244898	2288443	1000	-	.	source_transcript=ENST00000850838.1;source_transcript_name=LINC03112-259;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850838.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850838.1,ENST00000850838.1;transcript_id=HG00140_ch_T0000189;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_G0000044;transcript_name=HG00140_ch_T0000189;gene_name=LINC03112;ID=HG00140_ch_T0000189;Name=LINC03112
HG00140_chrY	CAT	exon	2244898	2246163	.	-	.	source_transcript=ENST00000850838.1;source_transcript_name=LINC03112-259;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850838.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850838.1,ENST00000850838.1;transcript_id=HG00140_ch_T0000189;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000189;transcript_name=HG00140_ch_T0000189;gene_name=LINC03112;ID=exon:HG00140_ch_T0000189:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2246164	2248881	.	-	.	source_transcript=ENST00000850838.1;source_transcript_name=LINC03112-259;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850838.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850838.1,ENST00000850838.1;transcript_id=HG00140_ch_T0000189;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000189;transcript_name=HG00140_ch_T0000189;gene_name=LINC03112;ID=intron:HG00140_ch_T0000189:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2248882	2249037	.	-	.	source_transcript=ENST00000850838.1;source_transcript_name=LINC03112-259;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850838.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850838.1,ENST00000850838.1;transcript_id=HG00140_ch_T0000189;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000189;transcript_name=HG00140_ch_T0000189;gene_name=LINC03112;ID=exon:HG00140_ch_T0000189:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2249038	2252983	.	-	.	source_transcript=ENST00000850838.1;source_transcript_name=LINC03112-259;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850838.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850838.1,ENST00000850838.1;transcript_id=HG00140_ch_T0000189;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000189;transcript_name=HG00140_ch_T0000189;gene_name=LINC03112;ID=intron:HG00140_ch_T0000189:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2252984	2253160	.	-	.	source_transcript=ENST00000850838.1;source_transcript_name=LINC03112-259;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850838.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850838.1,ENST00000850838.1;transcript_id=HG00140_ch_T0000189;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000189;transcript_name=HG00140_ch_T0000189;gene_name=LINC03112;ID=exon:HG00140_ch_T0000189:2;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2253161	2288359	.	-	.	source_transcript=ENST00000850838.1;source_transcript_name=LINC03112-259;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850838.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850838.1,ENST00000850838.1;transcript_id=HG00140_ch_T0000189;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000189;transcript_name=HG00140_ch_T0000189;gene_name=LINC03112;ID=intron:HG00140_ch_T0000189:2;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2288360	2288443	.	-	.	source_transcript=ENST00000850838.1;source_transcript_name=LINC03112-259;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850838.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850838.1,ENST00000850838.1;transcript_id=HG00140_ch_T0000189;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000189;transcript_name=HG00140_ch_T0000189;gene_name=LINC03112;ID=exon:HG00140_ch_T0000189:3;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2244898	2288437	1000	-	.	source_transcript=ENST00000850840.1;source_transcript_name=LINC03112-260;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850840.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850840.1,ENST00000850840.1;transcript_id=HG00140_ch_T0000190;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_G0000044;transcript_name=HG00140_ch_T0000190;gene_name=LINC03112;ID=HG00140_ch_T0000190;Name=LINC03112
HG00140_chrY	CAT	exon	2244898	2246163	.	-	.	source_transcript=ENST00000850840.1;source_transcript_name=LINC03112-260;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850840.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850840.1,ENST00000850840.1;transcript_id=HG00140_ch_T0000190;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000190;transcript_name=HG00140_ch_T0000190;gene_name=LINC03112;ID=exon:HG00140_ch_T0000190:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2246164	2248881	.	-	.	source_transcript=ENST00000850840.1;source_transcript_name=LINC03112-260;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850840.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850840.1,ENST00000850840.1;transcript_id=HG00140_ch_T0000190;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000190;transcript_name=HG00140_ch_T0000190;gene_name=LINC03112;ID=intron:HG00140_ch_T0000190:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2248882	2248969	.	-	.	source_transcript=ENST00000850840.1;source_transcript_name=LINC03112-260;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850840.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850840.1,ENST00000850840.1;transcript_id=HG00140_ch_T0000190;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000190;transcript_name=HG00140_ch_T0000190;gene_name=LINC03112;ID=exon:HG00140_ch_T0000190:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2248970	2252966	.	-	.	source_transcript=ENST00000850840.1;source_transcript_name=LINC03112-260;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850840.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850840.1,ENST00000850840.1;transcript_id=HG00140_ch_T0000190;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000190;transcript_name=HG00140_ch_T0000190;gene_name=LINC03112;ID=intron:HG00140_ch_T0000190:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2252967	2253160	.	-	.	source_transcript=ENST00000850840.1;source_transcript_name=LINC03112-260;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850840.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850840.1,ENST00000850840.1;transcript_id=HG00140_ch_T0000190;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000190;transcript_name=HG00140_ch_T0000190;gene_name=LINC03112;ID=exon:HG00140_ch_T0000190:2;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2253161	2288359	.	-	.	source_transcript=ENST00000850840.1;source_transcript_name=LINC03112-260;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850840.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850840.1,ENST00000850840.1;transcript_id=HG00140_ch_T0000190;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000190;transcript_name=HG00140_ch_T0000190;gene_name=LINC03112;ID=intron:HG00140_ch_T0000190:2;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2288360	2288437	.	-	.	source_transcript=ENST00000850840.1;source_transcript_name=LINC03112-260;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850840.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850840.1,ENST00000850840.1;transcript_id=HG00140_ch_T0000190;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000190;transcript_name=HG00140_ch_T0000190;gene_name=LINC03112;ID=exon:HG00140_ch_T0000190:3;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2244898	2288439	1000	-	.	source_transcript=ENST00000850841.1;source_transcript_name=LINC03112-261;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850841.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850841.1,ENST00000850841.1;transcript_id=HG00140_ch_T0000191;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_G0000044;transcript_name=HG00140_ch_T0000191;gene_name=LINC03112;ID=HG00140_ch_T0000191;Name=LINC03112
HG00140_chrY	CAT	exon	2244898	2246163	.	-	.	source_transcript=ENST00000850841.1;source_transcript_name=LINC03112-261;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850841.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850841.1,ENST00000850841.1;transcript_id=HG00140_ch_T0000191;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000191;transcript_name=HG00140_ch_T0000191;gene_name=LINC03112;ID=exon:HG00140_ch_T0000191:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2246164	2248881	.	-	.	source_transcript=ENST00000850841.1;source_transcript_name=LINC03112-261;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850841.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850841.1,ENST00000850841.1;transcript_id=HG00140_ch_T0000191;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000191;transcript_name=HG00140_ch_T0000191;gene_name=LINC03112;ID=intron:HG00140_ch_T0000191:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2248882	2248969	.	-	.	source_transcript=ENST00000850841.1;source_transcript_name=LINC03112-261;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850841.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850841.1,ENST00000850841.1;transcript_id=HG00140_ch_T0000191;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000191;transcript_name=HG00140_ch_T0000191;gene_name=LINC03112;ID=exon:HG00140_ch_T0000191:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2248970	2288359	.	-	.	source_transcript=ENST00000850841.1;source_transcript_name=LINC03112-261;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850841.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850841.1,ENST00000850841.1;transcript_id=HG00140_ch_T0000191;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000191;transcript_name=HG00140_ch_T0000191;gene_name=LINC03112;ID=intron:HG00140_ch_T0000191:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2288360	2288439	.	-	.	source_transcript=ENST00000850841.1;source_transcript_name=LINC03112-261;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850841.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850841.1,ENST00000850841.1;transcript_id=HG00140_ch_T0000191;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000191;transcript_name=HG00140_ch_T0000191;gene_name=LINC03112;ID=exon:HG00140_ch_T0000191:2;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2244899	2288437	1000	-	.	source_transcript=ENST00000711238.1;source_transcript_name=LINC03112-232;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711238.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711238.1,ENST00000711238.1;transcript_id=HG00140_ch_T0000192;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_G0000044;transcript_name=HG00140_ch_T0000192;gene_name=LINC03112;ID=HG00140_ch_T0000192;Name=LINC03112
HG00140_chrY	CAT	exon	2244899	2246163	.	-	.	source_transcript=ENST00000711238.1;source_transcript_name=LINC03112-232;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711238.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711238.1,ENST00000711238.1;transcript_id=HG00140_ch_T0000192;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000192;transcript_name=HG00140_ch_T0000192;gene_name=LINC03112;ID=exon:HG00140_ch_T0000192:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2246164	2252983	.	-	.	source_transcript=ENST00000711238.1;source_transcript_name=LINC03112-232;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711238.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711238.1,ENST00000711238.1;transcript_id=HG00140_ch_T0000192;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000192;transcript_name=HG00140_ch_T0000192;gene_name=LINC03112;ID=intron:HG00140_ch_T0000192:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2252984	2253160	.	-	.	source_transcript=ENST00000711238.1;source_transcript_name=LINC03112-232;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711238.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711238.1,ENST00000711238.1;transcript_id=HG00140_ch_T0000192;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000192;transcript_name=HG00140_ch_T0000192;gene_name=LINC03112;ID=exon:HG00140_ch_T0000192:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2253161	2288359	.	-	.	source_transcript=ENST00000711238.1;source_transcript_name=LINC03112-232;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711238.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711238.1,ENST00000711238.1;transcript_id=HG00140_ch_T0000192;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000192;transcript_name=HG00140_ch_T0000192;gene_name=LINC03112;ID=intron:HG00140_ch_T0000192:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2288360	2288437	.	-	.	source_transcript=ENST00000711238.1;source_transcript_name=LINC03112-232;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711238.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000711238.1,ENST00000711238.1;transcript_id=HG00140_ch_T0000192;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000192;transcript_name=HG00140_ch_T0000192;gene_name=LINC03112;ID=exon:HG00140_ch_T0000192:2;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2244900	2288446	1000	-	.	source_transcript=ENST00000850799.1;source_transcript_name=LINC03112-238;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850799.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850799.1,ENST00000850799.1;transcript_id=HG00140_ch_T0000193;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_G0000044;transcript_name=HG00140_ch_T0000193;gene_name=LINC03112;ID=HG00140_ch_T0000193;Name=LINC03112
HG00140_chrY	CAT	exon	2244900	2246163	.	-	.	source_transcript=ENST00000850799.1;source_transcript_name=LINC03112-238;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850799.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850799.1,ENST00000850799.1;transcript_id=HG00140_ch_T0000193;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000193;transcript_name=HG00140_ch_T0000193;gene_name=LINC03112;ID=exon:HG00140_ch_T0000193:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2246164	2248881	.	-	.	source_transcript=ENST00000850799.1;source_transcript_name=LINC03112-238;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850799.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850799.1,ENST00000850799.1;transcript_id=HG00140_ch_T0000193;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000193;transcript_name=HG00140_ch_T0000193;gene_name=LINC03112;ID=intron:HG00140_ch_T0000193:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2248882	2249037	.	-	.	source_transcript=ENST00000850799.1;source_transcript_name=LINC03112-238;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850799.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850799.1,ENST00000850799.1;transcript_id=HG00140_ch_T0000193;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000193;transcript_name=HG00140_ch_T0000193;gene_name=LINC03112;ID=exon:HG00140_ch_T0000193:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2249038	2251991	.	-	.	source_transcript=ENST00000850799.1;source_transcript_name=LINC03112-238;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850799.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850799.1,ENST00000850799.1;transcript_id=HG00140_ch_T0000193;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000193;transcript_name=HG00140_ch_T0000193;gene_name=LINC03112;ID=intron:HG00140_ch_T0000193:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2251992	2252324	.	-	.	source_transcript=ENST00000850799.1;source_transcript_name=LINC03112-238;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850799.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850799.1,ENST00000850799.1;transcript_id=HG00140_ch_T0000193;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000193;transcript_name=HG00140_ch_T0000193;gene_name=LINC03112;ID=exon:HG00140_ch_T0000193:2;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2252325	2288359	.	-	.	source_transcript=ENST00000850799.1;source_transcript_name=LINC03112-238;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850799.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850799.1,ENST00000850799.1;transcript_id=HG00140_ch_T0000193;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000193;transcript_name=HG00140_ch_T0000193;gene_name=LINC03112;ID=intron:HG00140_ch_T0000193:2;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2288360	2288446	.	-	.	source_transcript=ENST00000850799.1;source_transcript_name=LINC03112-238;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850799.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850799.1,ENST00000850799.1;transcript_id=HG00140_ch_T0000193;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000193;transcript_name=HG00140_ch_T0000193;gene_name=LINC03112;ID=exon:HG00140_ch_T0000193:3;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2244900	2288446	1000	-	.	source_transcript=ENST00000850800.1;source_transcript_name=LINC03112-239;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850800.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850800.1,ENST00000850800.1;transcript_id=HG00140_ch_T0000194;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_G0000044;transcript_name=HG00140_ch_T0000194;gene_name=LINC03112;ID=HG00140_ch_T0000194;Name=LINC03112
HG00140_chrY	CAT	exon	2244900	2246163	.	-	.	source_transcript=ENST00000850800.1;source_transcript_name=LINC03112-239;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850800.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850800.1,ENST00000850800.1;transcript_id=HG00140_ch_T0000194;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000194;transcript_name=HG00140_ch_T0000194;gene_name=LINC03112;ID=exon:HG00140_ch_T0000194:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2246164	2248881	.	-	.	source_transcript=ENST00000850800.1;source_transcript_name=LINC03112-239;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850800.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850800.1,ENST00000850800.1;transcript_id=HG00140_ch_T0000194;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000194;transcript_name=HG00140_ch_T0000194;gene_name=LINC03112;ID=intron:HG00140_ch_T0000194:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2248882	2249037	.	-	.	source_transcript=ENST00000850800.1;source_transcript_name=LINC03112-239;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850800.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850800.1,ENST00000850800.1;transcript_id=HG00140_ch_T0000194;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000194;transcript_name=HG00140_ch_T0000194;gene_name=LINC03112;ID=exon:HG00140_ch_T0000194:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2249038	2253792	.	-	.	source_transcript=ENST00000850800.1;source_transcript_name=LINC03112-239;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850800.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850800.1,ENST00000850800.1;transcript_id=HG00140_ch_T0000194;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000194;transcript_name=HG00140_ch_T0000194;gene_name=LINC03112;ID=intron:HG00140_ch_T0000194:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2253793	2253902	.	-	.	source_transcript=ENST00000850800.1;source_transcript_name=LINC03112-239;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850800.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850800.1,ENST00000850800.1;transcript_id=HG00140_ch_T0000194;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000194;transcript_name=HG00140_ch_T0000194;gene_name=LINC03112;ID=exon:HG00140_ch_T0000194:2;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2253903	2254050	.	-	.	source_transcript=ENST00000850800.1;source_transcript_name=LINC03112-239;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850800.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850800.1,ENST00000850800.1;transcript_id=HG00140_ch_T0000194;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000194;transcript_name=HG00140_ch_T0000194;gene_name=LINC03112;ID=intron:HG00140_ch_T0000194:2;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2254051	2254140	.	-	.	source_transcript=ENST00000850800.1;source_transcript_name=LINC03112-239;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850800.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850800.1,ENST00000850800.1;transcript_id=HG00140_ch_T0000194;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000194;transcript_name=HG00140_ch_T0000194;gene_name=LINC03112;ID=exon:HG00140_ch_T0000194:3;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2254141	2288359	.	-	.	source_transcript=ENST00000850800.1;source_transcript_name=LINC03112-239;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850800.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850800.1,ENST00000850800.1;transcript_id=HG00140_ch_T0000194;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000194;transcript_name=HG00140_ch_T0000194;gene_name=LINC03112;ID=intron:HG00140_ch_T0000194:3;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2288360	2288446	.	-	.	source_transcript=ENST00000850800.1;source_transcript_name=LINC03112-239;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850800.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850800.1,ENST00000850800.1;transcript_id=HG00140_ch_T0000194;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000194;transcript_name=HG00140_ch_T0000194;gene_name=LINC03112;ID=exon:HG00140_ch_T0000194:4;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2244900	2288438	1000	-	.	source_transcript=ENST00000850801.1;source_transcript_name=LINC03112-240;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850801.1;transcript_score=299.778;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850801.1,ENST00000850801.1;transcript_id=HG00140_ch_T0000195;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_G0000044;transcript_name=HG00140_ch_T0000195;gene_name=LINC03112;ID=HG00140_ch_T0000195;Name=LINC03112
HG00140_chrY	CAT	exon	2244900	2246163	.	-	.	source_transcript=ENST00000850801.1;source_transcript_name=LINC03112-240;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850801.1;transcript_score=299.778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850801.1,ENST00000850801.1;transcript_id=HG00140_ch_T0000195;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000195;transcript_name=HG00140_ch_T0000195;gene_name=LINC03112;ID=exon:HG00140_ch_T0000195:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2246164	2248881	.	-	.	source_transcript=ENST00000850801.1;source_transcript_name=LINC03112-240;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850801.1;transcript_score=299.778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850801.1,ENST00000850801.1;transcript_id=HG00140_ch_T0000195;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000195;transcript_name=HG00140_ch_T0000195;gene_name=LINC03112;ID=intron:HG00140_ch_T0000195:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2248882	2249037	.	-	.	source_transcript=ENST00000850801.1;source_transcript_name=LINC03112-240;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850801.1;transcript_score=299.778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850801.1,ENST00000850801.1;transcript_id=HG00140_ch_T0000195;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000195;transcript_name=HG00140_ch_T0000195;gene_name=LINC03112;ID=exon:HG00140_ch_T0000195:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2249038	2284253	.	-	.	source_transcript=ENST00000850801.1;source_transcript_name=LINC03112-240;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850801.1;transcript_score=299.778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850801.1,ENST00000850801.1;transcript_id=HG00140_ch_T0000195;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000195;transcript_name=HG00140_ch_T0000195;gene_name=LINC03112;ID=intron:HG00140_ch_T0000195:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2284254	2284559	.	-	.	source_transcript=ENST00000850801.1;source_transcript_name=LINC03112-240;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850801.1;transcript_score=299.778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850801.1,ENST00000850801.1;transcript_id=HG00140_ch_T0000195;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000195;transcript_name=HG00140_ch_T0000195;gene_name=LINC03112;ID=exon:HG00140_ch_T0000195:2;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2284560	2288359	.	-	.	source_transcript=ENST00000850801.1;source_transcript_name=LINC03112-240;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850801.1;transcript_score=299.778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850801.1,ENST00000850801.1;transcript_id=HG00140_ch_T0000195;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000195;transcript_name=HG00140_ch_T0000195;gene_name=LINC03112;ID=intron:HG00140_ch_T0000195:2;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2288360	2288438	.	-	.	source_transcript=ENST00000850801.1;source_transcript_name=LINC03112-240;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850801.1;transcript_score=299.778;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850801.1,ENST00000850801.1;transcript_id=HG00140_ch_T0000195;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000195;transcript_name=HG00140_ch_T0000195;gene_name=LINC03112;ID=exon:HG00140_ch_T0000195:3;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2244900	2288425	1000	-	.	source_transcript=ENST00000850804.1;source_transcript_name=LINC03112-243;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850804.1;transcript_score=299.796;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850804.1,ENST00000850804.1;transcript_id=HG00140_ch_T0000196;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_G0000044;transcript_name=HG00140_ch_T0000196;gene_name=LINC03112;ID=HG00140_ch_T0000196;Name=LINC03112
HG00140_chrY	CAT	exon	2244900	2246163	.	-	.	source_transcript=ENST00000850804.1;source_transcript_name=LINC03112-243;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850804.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850804.1,ENST00000850804.1;transcript_id=HG00140_ch_T0000196;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000196;transcript_name=HG00140_ch_T0000196;gene_name=LINC03112;ID=exon:HG00140_ch_T0000196:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2246164	2248881	.	-	.	source_transcript=ENST00000850804.1;source_transcript_name=LINC03112-243;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850804.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850804.1,ENST00000850804.1;transcript_id=HG00140_ch_T0000196;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000196;transcript_name=HG00140_ch_T0000196;gene_name=LINC03112;ID=intron:HG00140_ch_T0000196:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2248882	2249037	.	-	.	source_transcript=ENST00000850804.1;source_transcript_name=LINC03112-243;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850804.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850804.1,ENST00000850804.1;transcript_id=HG00140_ch_T0000196;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000196;transcript_name=HG00140_ch_T0000196;gene_name=LINC03112;ID=exon:HG00140_ch_T0000196:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2249038	2252966	.	-	.	source_transcript=ENST00000850804.1;source_transcript_name=LINC03112-243;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850804.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850804.1,ENST00000850804.1;transcript_id=HG00140_ch_T0000196;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000196;transcript_name=HG00140_ch_T0000196;gene_name=LINC03112;ID=intron:HG00140_ch_T0000196:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2252967	2253160	.	-	.	source_transcript=ENST00000850804.1;source_transcript_name=LINC03112-243;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850804.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850804.1,ENST00000850804.1;transcript_id=HG00140_ch_T0000196;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000196;transcript_name=HG00140_ch_T0000196;gene_name=LINC03112;ID=exon:HG00140_ch_T0000196:2;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2253161	2284253	.	-	.	source_transcript=ENST00000850804.1;source_transcript_name=LINC03112-243;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850804.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850804.1,ENST00000850804.1;transcript_id=HG00140_ch_T0000196;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000196;transcript_name=HG00140_ch_T0000196;gene_name=LINC03112;ID=intron:HG00140_ch_T0000196:2;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2284254	2284535	.	-	.	source_transcript=ENST00000850804.1;source_transcript_name=LINC03112-243;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850804.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850804.1,ENST00000850804.1;transcript_id=HG00140_ch_T0000196;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000196;transcript_name=HG00140_ch_T0000196;gene_name=LINC03112;ID=exon:HG00140_ch_T0000196:3;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2284536	2288359	.	-	.	source_transcript=ENST00000850804.1;source_transcript_name=LINC03112-243;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850804.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850804.1,ENST00000850804.1;transcript_id=HG00140_ch_T0000196;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000196;transcript_name=HG00140_ch_T0000196;gene_name=LINC03112;ID=intron:HG00140_ch_T0000196:3;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2288360	2288425	.	-	.	source_transcript=ENST00000850804.1;source_transcript_name=LINC03112-243;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850804.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850804.1,ENST00000850804.1;transcript_id=HG00140_ch_T0000196;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000196;transcript_name=HG00140_ch_T0000196;gene_name=LINC03112;ID=exon:HG00140_ch_T0000196:4;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2244900	2288422	1000	-	.	source_transcript=ENST00000850806.1;source_transcript_name=LINC03112-245;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850806.1;transcript_score=299.755;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850806.1,ENST00000850806.1;transcript_id=HG00140_ch_T0000197;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_G0000044;transcript_name=HG00140_ch_T0000197;gene_name=LINC03112;ID=HG00140_ch_T0000197;Name=LINC03112
HG00140_chrY	CAT	exon	2244900	2246163	.	-	.	source_transcript=ENST00000850806.1;source_transcript_name=LINC03112-245;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850806.1;transcript_score=299.755;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850806.1,ENST00000850806.1;transcript_id=HG00140_ch_T0000197;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000197;transcript_name=HG00140_ch_T0000197;gene_name=LINC03112;ID=exon:HG00140_ch_T0000197:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2246164	2284253	.	-	.	source_transcript=ENST00000850806.1;source_transcript_name=LINC03112-245;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850806.1;transcript_score=299.755;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850806.1,ENST00000850806.1;transcript_id=HG00140_ch_T0000197;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000197;transcript_name=HG00140_ch_T0000197;gene_name=LINC03112;ID=intron:HG00140_ch_T0000197:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2284254	2284559	.	-	.	source_transcript=ENST00000850806.1;source_transcript_name=LINC03112-245;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850806.1;transcript_score=299.755;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850806.1,ENST00000850806.1;transcript_id=HG00140_ch_T0000197;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000197;transcript_name=HG00140_ch_T0000197;gene_name=LINC03112;ID=exon:HG00140_ch_T0000197:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2284560	2288359	.	-	.	source_transcript=ENST00000850806.1;source_transcript_name=LINC03112-245;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850806.1;transcript_score=299.755;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850806.1,ENST00000850806.1;transcript_id=HG00140_ch_T0000197;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000197;transcript_name=HG00140_ch_T0000197;gene_name=LINC03112;ID=intron:HG00140_ch_T0000197:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2288360	2288422	.	-	.	source_transcript=ENST00000850806.1;source_transcript_name=LINC03112-245;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850806.1;transcript_score=299.755;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850806.1,ENST00000850806.1;transcript_id=HG00140_ch_T0000197;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000197;transcript_name=HG00140_ch_T0000197;gene_name=LINC03112;ID=exon:HG00140_ch_T0000197:2;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2244900	2288421	1000	-	.	source_transcript=ENST00000850807.1;source_transcript_name=LINC03112-246;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850807.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850807.1,ENST00000850807.1;transcript_id=HG00140_ch_T0000198;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_G0000044;transcript_name=HG00140_ch_T0000198;gene_name=LINC03112;ID=HG00140_ch_T0000198;Name=LINC03112
HG00140_chrY	CAT	exon	2244900	2246163	.	-	.	source_transcript=ENST00000850807.1;source_transcript_name=LINC03112-246;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850807.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850807.1,ENST00000850807.1;transcript_id=HG00140_ch_T0000198;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000198;transcript_name=HG00140_ch_T0000198;gene_name=LINC03112;ID=exon:HG00140_ch_T0000198:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2246164	2248881	.	-	.	source_transcript=ENST00000850807.1;source_transcript_name=LINC03112-246;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850807.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850807.1,ENST00000850807.1;transcript_id=HG00140_ch_T0000198;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000198;transcript_name=HG00140_ch_T0000198;gene_name=LINC03112;ID=intron:HG00140_ch_T0000198:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2248882	2248969	.	-	.	source_transcript=ENST00000850807.1;source_transcript_name=LINC03112-246;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850807.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850807.1,ENST00000850807.1;transcript_id=HG00140_ch_T0000198;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000198;transcript_name=HG00140_ch_T0000198;gene_name=LINC03112;ID=exon:HG00140_ch_T0000198:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2248970	2253068	.	-	.	source_transcript=ENST00000850807.1;source_transcript_name=LINC03112-246;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850807.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850807.1,ENST00000850807.1;transcript_id=HG00140_ch_T0000198;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000198;transcript_name=HG00140_ch_T0000198;gene_name=LINC03112;ID=intron:HG00140_ch_T0000198:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2253069	2253160	.	-	.	source_transcript=ENST00000850807.1;source_transcript_name=LINC03112-246;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850807.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850807.1,ENST00000850807.1;transcript_id=HG00140_ch_T0000198;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000198;transcript_name=HG00140_ch_T0000198;gene_name=LINC03112;ID=exon:HG00140_ch_T0000198:2;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2253161	2288359	.	-	.	source_transcript=ENST00000850807.1;source_transcript_name=LINC03112-246;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850807.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850807.1,ENST00000850807.1;transcript_id=HG00140_ch_T0000198;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000198;transcript_name=HG00140_ch_T0000198;gene_name=LINC03112;ID=intron:HG00140_ch_T0000198:2;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2288360	2288421	.	-	.	source_transcript=ENST00000850807.1;source_transcript_name=LINC03112-246;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850807.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850807.1,ENST00000850807.1;transcript_id=HG00140_ch_T0000198;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000198;transcript_name=HG00140_ch_T0000198;gene_name=LINC03112;ID=exon:HG00140_ch_T0000198:3;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2244900	2288418	1000	-	.	source_transcript=ENST00000850808.1;source_transcript_name=LINC03112-247;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850808.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850808.1,ENST00000850808.1;transcript_id=HG00140_ch_T0000199;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_G0000044;transcript_name=HG00140_ch_T0000199;gene_name=LINC03112;ID=HG00140_ch_T0000199;Name=LINC03112
HG00140_chrY	CAT	exon	2244900	2246163	.	-	.	source_transcript=ENST00000850808.1;source_transcript_name=LINC03112-247;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850808.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850808.1,ENST00000850808.1;transcript_id=HG00140_ch_T0000199;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000199;transcript_name=HG00140_ch_T0000199;gene_name=LINC03112;ID=exon:HG00140_ch_T0000199:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2246164	2248881	.	-	.	source_transcript=ENST00000850808.1;source_transcript_name=LINC03112-247;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850808.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850808.1,ENST00000850808.1;transcript_id=HG00140_ch_T0000199;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000199;transcript_name=HG00140_ch_T0000199;gene_name=LINC03112;ID=intron:HG00140_ch_T0000199:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2248882	2249037	.	-	.	source_transcript=ENST00000850808.1;source_transcript_name=LINC03112-247;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850808.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850808.1,ENST00000850808.1;transcript_id=HG00140_ch_T0000199;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000199;transcript_name=HG00140_ch_T0000199;gene_name=LINC03112;ID=exon:HG00140_ch_T0000199:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2249038	2260774	.	-	.	source_transcript=ENST00000850808.1;source_transcript_name=LINC03112-247;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850808.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850808.1,ENST00000850808.1;transcript_id=HG00140_ch_T0000199;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000199;transcript_name=HG00140_ch_T0000199;gene_name=LINC03112;ID=intron:HG00140_ch_T0000199:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2260775	2260851	.	-	.	source_transcript=ENST00000850808.1;source_transcript_name=LINC03112-247;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850808.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850808.1,ENST00000850808.1;transcript_id=HG00140_ch_T0000199;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000199;transcript_name=HG00140_ch_T0000199;gene_name=LINC03112;ID=exon:HG00140_ch_T0000199:2;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2260852	2288359	.	-	.	source_transcript=ENST00000850808.1;source_transcript_name=LINC03112-247;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850808.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850808.1,ENST00000850808.1;transcript_id=HG00140_ch_T0000199;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000199;transcript_name=HG00140_ch_T0000199;gene_name=LINC03112;ID=intron:HG00140_ch_T0000199:2;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2288360	2288418	.	-	.	source_transcript=ENST00000850808.1;source_transcript_name=LINC03112-247;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850808.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850808.1,ENST00000850808.1;transcript_id=HG00140_ch_T0000199;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000199;transcript_name=HG00140_ch_T0000199;gene_name=LINC03112;ID=exon:HG00140_ch_T0000199:3;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2244900	2288415	1000	-	.	source_transcript=ENST00000850810.1;source_transcript_name=LINC03112-249;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850810.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850810.1,ENST00000850810.1;transcript_id=HG00140_ch_T0000200;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_G0000044;transcript_name=HG00140_ch_T0000200;gene_name=LINC03112;ID=HG00140_ch_T0000200;Name=LINC03112
HG00140_chrY	CAT	exon	2244900	2245019	.	-	.	source_transcript=ENST00000850810.1;source_transcript_name=LINC03112-249;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850810.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850810.1,ENST00000850810.1;transcript_id=HG00140_ch_T0000200;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000200;transcript_name=HG00140_ch_T0000200;gene_name=LINC03112;ID=exon:HG00140_ch_T0000200:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2245020	2245955	.	-	.	source_transcript=ENST00000850810.1;source_transcript_name=LINC03112-249;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850810.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850810.1,ENST00000850810.1;transcript_id=HG00140_ch_T0000200;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000200;transcript_name=HG00140_ch_T0000200;gene_name=LINC03112;ID=intron:HG00140_ch_T0000200:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2245956	2246163	.	-	.	source_transcript=ENST00000850810.1;source_transcript_name=LINC03112-249;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850810.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850810.1,ENST00000850810.1;transcript_id=HG00140_ch_T0000200;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000200;transcript_name=HG00140_ch_T0000200;gene_name=LINC03112;ID=exon:HG00140_ch_T0000200:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2246164	2288279	.	-	.	source_transcript=ENST00000850810.1;source_transcript_name=LINC03112-249;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850810.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850810.1,ENST00000850810.1;transcript_id=HG00140_ch_T0000200;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000200;transcript_name=HG00140_ch_T0000200;gene_name=LINC03112;ID=intron:HG00140_ch_T0000200:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2288280	2288415	.	-	.	source_transcript=ENST00000850810.1;source_transcript_name=LINC03112-249;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850810.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850810.1,ENST00000850810.1;transcript_id=HG00140_ch_T0000200;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000200;transcript_name=HG00140_ch_T0000200;gene_name=LINC03112;ID=exon:HG00140_ch_T0000200:2;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2244900	2288410	1000	-	.	source_transcript=ENST00000850811.1;source_transcript_name=LINC03112-250;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850811.1;transcript_score=299.783;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850811.1,ENST00000850811.1;transcript_id=HG00140_ch_T0000201;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_G0000044;transcript_name=HG00140_ch_T0000201;gene_name=LINC03112;ID=HG00140_ch_T0000201;Name=LINC03112
HG00140_chrY	CAT	exon	2244900	2246163	.	-	.	source_transcript=ENST00000850811.1;source_transcript_name=LINC03112-250;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850811.1;transcript_score=299.783;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850811.1,ENST00000850811.1;transcript_id=HG00140_ch_T0000201;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000201;transcript_name=HG00140_ch_T0000201;gene_name=LINC03112;ID=exon:HG00140_ch_T0000201:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2246164	2248881	.	-	.	source_transcript=ENST00000850811.1;source_transcript_name=LINC03112-250;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850811.1;transcript_score=299.783;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850811.1,ENST00000850811.1;transcript_id=HG00140_ch_T0000201;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000201;transcript_name=HG00140_ch_T0000201;gene_name=LINC03112;ID=intron:HG00140_ch_T0000201:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2248882	2249037	.	-	.	source_transcript=ENST00000850811.1;source_transcript_name=LINC03112-250;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850811.1;transcript_score=299.783;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850811.1,ENST00000850811.1;transcript_id=HG00140_ch_T0000201;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000201;transcript_name=HG00140_ch_T0000201;gene_name=LINC03112;ID=exon:HG00140_ch_T0000201:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2249038	2253068	.	-	.	source_transcript=ENST00000850811.1;source_transcript_name=LINC03112-250;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850811.1;transcript_score=299.783;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850811.1,ENST00000850811.1;transcript_id=HG00140_ch_T0000201;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000201;transcript_name=HG00140_ch_T0000201;gene_name=LINC03112;ID=intron:HG00140_ch_T0000201:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2253069	2253160	.	-	.	source_transcript=ENST00000850811.1;source_transcript_name=LINC03112-250;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850811.1;transcript_score=299.783;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850811.1,ENST00000850811.1;transcript_id=HG00140_ch_T0000201;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000201;transcript_name=HG00140_ch_T0000201;gene_name=LINC03112;ID=exon:HG00140_ch_T0000201:2;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2253161	2284253	.	-	.	source_transcript=ENST00000850811.1;source_transcript_name=LINC03112-250;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850811.1;transcript_score=299.783;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850811.1,ENST00000850811.1;transcript_id=HG00140_ch_T0000201;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000201;transcript_name=HG00140_ch_T0000201;gene_name=LINC03112;ID=intron:HG00140_ch_T0000201:2;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2284254	2284535	.	-	.	source_transcript=ENST00000850811.1;source_transcript_name=LINC03112-250;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850811.1;transcript_score=299.783;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850811.1,ENST00000850811.1;transcript_id=HG00140_ch_T0000201;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000201;transcript_name=HG00140_ch_T0000201;gene_name=LINC03112;ID=exon:HG00140_ch_T0000201:3;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2284536	2288359	.	-	.	source_transcript=ENST00000850811.1;source_transcript_name=LINC03112-250;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850811.1;transcript_score=299.783;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850811.1,ENST00000850811.1;transcript_id=HG00140_ch_T0000201;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000201;transcript_name=HG00140_ch_T0000201;gene_name=LINC03112;ID=intron:HG00140_ch_T0000201:3;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2288360	2288410	.	-	.	source_transcript=ENST00000850811.1;source_transcript_name=LINC03112-250;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850811.1;transcript_score=299.783;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850811.1,ENST00000850811.1;transcript_id=HG00140_ch_T0000201;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000201;transcript_name=HG00140_ch_T0000201;gene_name=LINC03112;ID=exon:HG00140_ch_T0000201:4;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2244900	2263136	1000	-	.	source_transcript=ENST00000850813.1;source_transcript_name=LINC03112-252;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850813.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850813.1,ENST00000850813.1;transcript_id=HG00140_ch_T0000202;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_G0000044;transcript_name=HG00140_ch_T0000202;gene_name=LINC03112;ID=HG00140_ch_T0000202;Name=LINC03112
HG00140_chrY	CAT	exon	2244900	2246163	.	-	.	source_transcript=ENST00000850813.1;source_transcript_name=LINC03112-252;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850813.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850813.1,ENST00000850813.1;transcript_id=HG00140_ch_T0000202;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000202;transcript_name=HG00140_ch_T0000202;gene_name=LINC03112;ID=exon:HG00140_ch_T0000202:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2246164	2248881	.	-	.	source_transcript=ENST00000850813.1;source_transcript_name=LINC03112-252;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850813.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850813.1,ENST00000850813.1;transcript_id=HG00140_ch_T0000202;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000202;transcript_name=HG00140_ch_T0000202;gene_name=LINC03112;ID=intron:HG00140_ch_T0000202:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2248882	2249037	.	-	.	source_transcript=ENST00000850813.1;source_transcript_name=LINC03112-252;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850813.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850813.1,ENST00000850813.1;transcript_id=HG00140_ch_T0000202;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000202;transcript_name=HG00140_ch_T0000202;gene_name=LINC03112;ID=exon:HG00140_ch_T0000202:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2249038	2263107	.	-	.	source_transcript=ENST00000850813.1;source_transcript_name=LINC03112-252;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850813.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850813.1,ENST00000850813.1;transcript_id=HG00140_ch_T0000202;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000202;transcript_name=HG00140_ch_T0000202;gene_name=LINC03112;ID=intron:HG00140_ch_T0000202:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2263108	2263136	.	-	.	source_transcript=ENST00000850813.1;source_transcript_name=LINC03112-252;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850813.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850813.1,ENST00000850813.1;transcript_id=HG00140_ch_T0000202;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000202;transcript_name=HG00140_ch_T0000202;gene_name=LINC03112;ID=exon:HG00140_ch_T0000202:2;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2244900	2262868	1000	-	.	source_transcript=ENST00000850814.1;source_transcript_name=LINC03112-253;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850814.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850814.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850814.1,ENST00000850814.1;transcript_id=HG00140_ch_T0000203;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_G0000044;transcript_name=HG00140_ch_T0000203;gene_name=LINC03112;ID=HG00140_ch_T0000203;Name=LINC03112
HG00140_chrY	CAT	exon	2244900	2246163	.	-	.	source_transcript=ENST00000850814.1;source_transcript_name=LINC03112-253;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850814.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850814.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850814.1,ENST00000850814.1;transcript_id=HG00140_ch_T0000203;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000203;transcript_name=HG00140_ch_T0000203;gene_name=LINC03112;ID=exon:HG00140_ch_T0000203:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2246164	2262715	.	-	.	source_transcript=ENST00000850814.1;source_transcript_name=LINC03112-253;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850814.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850814.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850814.1,ENST00000850814.1;transcript_id=HG00140_ch_T0000203;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000203;transcript_name=HG00140_ch_T0000203;gene_name=LINC03112;ID=intron:HG00140_ch_T0000203:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2262716	2262868	.	-	.	source_transcript=ENST00000850814.1;source_transcript_name=LINC03112-253;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850814.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850814.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850814.1,ENST00000850814.1;transcript_id=HG00140_ch_T0000203;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000203;transcript_name=HG00140_ch_T0000203;gene_name=LINC03112;ID=exon:HG00140_ch_T0000203:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2244903	2288437	1000	-	.	source_transcript=ENST00000850803.1;source_transcript_name=LINC03112-242;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850803.1;transcript_score=299.766;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850803.1,ENST00000850803.1;transcript_id=HG00140_ch_T0000204;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_G0000044;transcript_name=HG00140_ch_T0000204;gene_name=LINC03112;ID=HG00140_ch_T0000204;Name=LINC03112
HG00140_chrY	CAT	exon	2244903	2246163	.	-	.	source_transcript=ENST00000850803.1;source_transcript_name=LINC03112-242;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850803.1;transcript_score=299.766;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850803.1,ENST00000850803.1;transcript_id=HG00140_ch_T0000204;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000204;transcript_name=HG00140_ch_T0000204;gene_name=LINC03112;ID=exon:HG00140_ch_T0000204:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2246164	2248881	.	-	.	source_transcript=ENST00000850803.1;source_transcript_name=LINC03112-242;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850803.1;transcript_score=299.766;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850803.1,ENST00000850803.1;transcript_id=HG00140_ch_T0000204;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000204;transcript_name=HG00140_ch_T0000204;gene_name=LINC03112;ID=intron:HG00140_ch_T0000204:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2248882	2248969	.	-	.	source_transcript=ENST00000850803.1;source_transcript_name=LINC03112-242;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850803.1;transcript_score=299.766;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850803.1,ENST00000850803.1;transcript_id=HG00140_ch_T0000204;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000204;transcript_name=HG00140_ch_T0000204;gene_name=LINC03112;ID=exon:HG00140_ch_T0000204:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2248970	2284253	.	-	.	source_transcript=ENST00000850803.1;source_transcript_name=LINC03112-242;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850803.1;transcript_score=299.766;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850803.1,ENST00000850803.1;transcript_id=HG00140_ch_T0000204;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000204;transcript_name=HG00140_ch_T0000204;gene_name=LINC03112;ID=intron:HG00140_ch_T0000204:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2284254	2284535	.	-	.	source_transcript=ENST00000850803.1;source_transcript_name=LINC03112-242;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850803.1;transcript_score=299.766;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850803.1,ENST00000850803.1;transcript_id=HG00140_ch_T0000204;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000204;transcript_name=HG00140_ch_T0000204;gene_name=LINC03112;ID=exon:HG00140_ch_T0000204:2;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2284536	2288359	.	-	.	source_transcript=ENST00000850803.1;source_transcript_name=LINC03112-242;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850803.1;transcript_score=299.766;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850803.1,ENST00000850803.1;transcript_id=HG00140_ch_T0000204;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000204;transcript_name=HG00140_ch_T0000204;gene_name=LINC03112;ID=intron:HG00140_ch_T0000204:2;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2288360	2288437	.	-	.	source_transcript=ENST00000850803.1;source_transcript_name=LINC03112-242;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850803.1;transcript_score=299.766;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850803.1,ENST00000850803.1;transcript_id=HG00140_ch_T0000204;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000204;transcript_name=HG00140_ch_T0000204;gene_name=LINC03112;ID=exon:HG00140_ch_T0000204:3;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2244903	2260968	1000	-	.	source_transcript=ENST00000850815.1;source_transcript_name=LINC03112-254;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850815.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850815.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850815.1,ENST00000850815.1;transcript_id=HG00140_ch_T0000205;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_G0000044;transcript_name=HG00140_ch_T0000205;gene_name=LINC03112;ID=HG00140_ch_T0000205;Name=LINC03112
HG00140_chrY	CAT	exon	2244903	2246163	.	-	.	source_transcript=ENST00000850815.1;source_transcript_name=LINC03112-254;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850815.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850815.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850815.1,ENST00000850815.1;transcript_id=HG00140_ch_T0000205;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000205;transcript_name=HG00140_ch_T0000205;gene_name=LINC03112;ID=exon:HG00140_ch_T0000205:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2246164	2260774	.	-	.	source_transcript=ENST00000850815.1;source_transcript_name=LINC03112-254;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850815.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850815.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850815.1,ENST00000850815.1;transcript_id=HG00140_ch_T0000205;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000205;transcript_name=HG00140_ch_T0000205;gene_name=LINC03112;ID=intron:HG00140_ch_T0000205:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2260775	2260968	.	-	.	source_transcript=ENST00000850815.1;source_transcript_name=LINC03112-254;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850815.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850815.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850815.1,ENST00000850815.1;transcript_id=HG00140_ch_T0000205;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000205;transcript_name=HG00140_ch_T0000205;gene_name=LINC03112;ID=exon:HG00140_ch_T0000205:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2284168	2288426	1000	-	.	source_transcript=ENST00000850816.1;source_transcript_name=LINC03112-255;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850816.1;transcript_score=299.08;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850816.1,ENST00000850816.1;transcript_id=HG00140_ch_T0000210;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_G0000044;transcript_name=HG00140_ch_T0000210;gene_name=LINC03112;ID=HG00140_ch_T0000210;Name=LINC03112
HG00140_chrY	CAT	exon	2284168	2284535	.	-	.	source_transcript=ENST00000850816.1;source_transcript_name=LINC03112-255;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850816.1;transcript_score=299.08;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850816.1,ENST00000850816.1;transcript_id=HG00140_ch_T0000210;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000210;transcript_name=HG00140_ch_T0000210;gene_name=LINC03112;ID=exon:HG00140_ch_T0000210:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2284536	2288359	.	-	.	source_transcript=ENST00000850816.1;source_transcript_name=LINC03112-255;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850816.1;transcript_score=299.08;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850816.1,ENST00000850816.1;transcript_id=HG00140_ch_T0000210;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000210;transcript_name=HG00140_ch_T0000210;gene_name=LINC03112;ID=intron:HG00140_ch_T0000210:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2288360	2288426	.	-	.	source_transcript=ENST00000850816.1;source_transcript_name=LINC03112-255;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850816.1;transcript_score=299.08;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850816.1,ENST00000850816.1;transcript_id=HG00140_ch_T0000210;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000210;transcript_name=HG00140_ch_T0000210;gene_name=LINC03112;ID=exon:HG00140_ch_T0000210:1;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2287704	2288437	1000	-	.	source_transcript=ENST00000850817.1;source_transcript_name=LINC03112-256;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850817.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850817.1,ENST00000850817.1;transcript_id=HG00140_ch_T0000212;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_G0000044;transcript_name=HG00140_ch_T0000212;gene_name=LINC03112;ID=HG00140_ch_T0000212;Name=LINC03112
HG00140_chrY	CAT	exon	2287704	2288437	.	-	.	source_transcript=ENST00000850817.1;source_transcript_name=LINC03112-256;source_gene=ENSG00000292360.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292360.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850817.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC03112;alternative_source_transcripts=ENST00000850817.1,ENST00000850817.1;transcript_id=HG00140_ch_T0000212;gene_id=HG00140_ch_G0000044;Parent=HG00140_ch_T0000212;transcript_name=HG00140_ch_T0000212;gene_name=LINC03112;ID=exon:HG00140_ch_T0000212:0;Name=LINC03112;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	2262928	2285285	.	+	.	source_gene_common_name=ENSG00000310557;source_gene=ENSG00000310557.1;alternative_source_transcripts=ENST00000850818.1,ENST00000850818.1;gene_id=HG00140_ch_G0000045;gene_biotype=lncRNA;gene_name=ENSG00000310557;gene_sources=liftoff;ID=HG00140_ch_G0000045;Name=ENSG00000310557
HG00140_chrY	CAT	transcript	2262928	2285285	1000	+	.	source_transcript=ENST00000850818.1;source_transcript_name=ENST00000850818;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850818.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850818.1,ENST00000850818.1;transcript_id=HG00140_ch_T0000206;gene_id=HG00140_ch_G0000045;Parent=HG00140_ch_G0000045;transcript_name=HG00140_ch_T0000206;gene_name=ENSG00000310557;ID=HG00140_ch_T0000206;Name=ENSG00000310557
HG00140_chrY	CAT	exon	2262928	2263119	.	+	.	source_transcript=ENST00000850818.1;source_transcript_name=ENST00000850818;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850818.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850818.1,ENST00000850818.1;transcript_id=HG00140_ch_T0000206;gene_id=HG00140_ch_G0000045;Parent=HG00140_ch_T0000206;transcript_name=HG00140_ch_T0000206;gene_name=ENSG00000310557;ID=exon:HG00140_ch_T0000206:0;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2263120	2272597	.	+	.	source_transcript=ENST00000850818.1;source_transcript_name=ENST00000850818;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850818.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850818.1,ENST00000850818.1;transcript_id=HG00140_ch_T0000206;gene_id=HG00140_ch_G0000045;Parent=HG00140_ch_T0000206;transcript_name=HG00140_ch_T0000206;gene_name=ENSG00000310557;ID=intron:HG00140_ch_T0000206:0;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2272598	2272672	.	+	.	source_transcript=ENST00000850818.1;source_transcript_name=ENST00000850818;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850818.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850818.1,ENST00000850818.1;transcript_id=HG00140_ch_T0000206;gene_id=HG00140_ch_G0000045;Parent=HG00140_ch_T0000206;transcript_name=HG00140_ch_T0000206;gene_name=ENSG00000310557;ID=exon:HG00140_ch_T0000206:1;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2272673	2276151	.	+	.	source_transcript=ENST00000850818.1;source_transcript_name=ENST00000850818;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850818.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850818.1,ENST00000850818.1;transcript_id=HG00140_ch_T0000206;gene_id=HG00140_ch_G0000045;Parent=HG00140_ch_T0000206;transcript_name=HG00140_ch_T0000206;gene_name=ENSG00000310557;ID=intron:HG00140_ch_T0000206:1;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2276152	2276314	.	+	.	source_transcript=ENST00000850818.1;source_transcript_name=ENST00000850818;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850818.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850818.1,ENST00000850818.1;transcript_id=HG00140_ch_T0000206;gene_id=HG00140_ch_G0000045;Parent=HG00140_ch_T0000206;transcript_name=HG00140_ch_T0000206;gene_name=ENSG00000310557;ID=exon:HG00140_ch_T0000206:2;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2276315	2285077	.	+	.	source_transcript=ENST00000850818.1;source_transcript_name=ENST00000850818;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850818.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850818.1,ENST00000850818.1;transcript_id=HG00140_ch_T0000206;gene_id=HG00140_ch_G0000045;Parent=HG00140_ch_T0000206;transcript_name=HG00140_ch_T0000206;gene_name=ENSG00000310557;ID=intron:HG00140_ch_T0000206:2;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2285078	2285285	.	+	.	source_transcript=ENST00000850818.1;source_transcript_name=ENST00000850818;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850818.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850818.1,ENST00000850818.1;transcript_id=HG00140_ch_T0000206;gene_id=HG00140_ch_G0000045;Parent=HG00140_ch_T0000206;transcript_name=HG00140_ch_T0000206;gene_name=ENSG00000310557;ID=exon:HG00140_ch_T0000206:3;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2262929	2282509	1000	+	.	source_transcript=ENST00000850820.1;source_transcript_name=ENST00000850820;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850820.1;transcript_score=299.87;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850820.1,ENST00000850820.1;transcript_id=HG00140_ch_T0000207;gene_id=HG00140_ch_G0000045;Parent=HG00140_ch_G0000045;transcript_name=HG00140_ch_T0000207;gene_name=ENSG00000310557;ID=HG00140_ch_T0000207;Name=ENSG00000310557
HG00140_chrY	CAT	exon	2262929	2263119	.	+	.	source_transcript=ENST00000850820.1;source_transcript_name=ENST00000850820;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850820.1;transcript_score=299.87;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850820.1,ENST00000850820.1;transcript_id=HG00140_ch_T0000207;gene_id=HG00140_ch_G0000045;Parent=HG00140_ch_T0000207;transcript_name=HG00140_ch_T0000207;gene_name=ENSG00000310557;ID=exon:HG00140_ch_T0000207:0;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2263120	2272597	.	+	.	source_transcript=ENST00000850820.1;source_transcript_name=ENST00000850820;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850820.1;transcript_score=299.87;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850820.1,ENST00000850820.1;transcript_id=HG00140_ch_T0000207;gene_id=HG00140_ch_G0000045;Parent=HG00140_ch_T0000207;transcript_name=HG00140_ch_T0000207;gene_name=ENSG00000310557;ID=intron:HG00140_ch_T0000207:0;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2272598	2272672	.	+	.	source_transcript=ENST00000850820.1;source_transcript_name=ENST00000850820;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850820.1;transcript_score=299.87;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850820.1,ENST00000850820.1;transcript_id=HG00140_ch_T0000207;gene_id=HG00140_ch_G0000045;Parent=HG00140_ch_T0000207;transcript_name=HG00140_ch_T0000207;gene_name=ENSG00000310557;ID=exon:HG00140_ch_T0000207:1;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2272673	2276151	.	+	.	source_transcript=ENST00000850820.1;source_transcript_name=ENST00000850820;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850820.1;transcript_score=299.87;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850820.1,ENST00000850820.1;transcript_id=HG00140_ch_T0000207;gene_id=HG00140_ch_G0000045;Parent=HG00140_ch_T0000207;transcript_name=HG00140_ch_T0000207;gene_name=ENSG00000310557;ID=intron:HG00140_ch_T0000207:1;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2276152	2276314	.	+	.	source_transcript=ENST00000850820.1;source_transcript_name=ENST00000850820;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850820.1;transcript_score=299.87;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850820.1,ENST00000850820.1;transcript_id=HG00140_ch_T0000207;gene_id=HG00140_ch_G0000045;Parent=HG00140_ch_T0000207;transcript_name=HG00140_ch_T0000207;gene_name=ENSG00000310557;ID=exon:HG00140_ch_T0000207:2;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2276315	2282170	.	+	.	source_transcript=ENST00000850820.1;source_transcript_name=ENST00000850820;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850820.1;transcript_score=299.87;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850820.1,ENST00000850820.1;transcript_id=HG00140_ch_T0000207;gene_id=HG00140_ch_G0000045;Parent=HG00140_ch_T0000207;transcript_name=HG00140_ch_T0000207;gene_name=ENSG00000310557;ID=intron:HG00140_ch_T0000207:2;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2282171	2282509	.	+	.	source_transcript=ENST00000850820.1;source_transcript_name=ENST00000850820;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850820.1;transcript_score=299.87;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850820.1,ENST00000850820.1;transcript_id=HG00140_ch_T0000207;gene_id=HG00140_ch_G0000045;Parent=HG00140_ch_T0000207;transcript_name=HG00140_ch_T0000207;gene_name=ENSG00000310557;ID=exon:HG00140_ch_T0000207:3;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2262931	2285284	1000	+	.	source_transcript=ENST00000850819.1;source_transcript_name=ENST00000850819;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850819.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850819.1,ENST00000850819.1;transcript_id=HG00140_ch_T0000208;gene_id=HG00140_ch_G0000045;Parent=HG00140_ch_G0000045;transcript_name=HG00140_ch_T0000208;gene_name=ENSG00000310557;ID=HG00140_ch_T0000208;Name=ENSG00000310557
HG00140_chrY	CAT	exon	2262931	2263119	.	+	.	source_transcript=ENST00000850819.1;source_transcript_name=ENST00000850819;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850819.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850819.1,ENST00000850819.1;transcript_id=HG00140_ch_T0000208;gene_id=HG00140_ch_G0000045;Parent=HG00140_ch_T0000208;transcript_name=HG00140_ch_T0000208;gene_name=ENSG00000310557;ID=exon:HG00140_ch_T0000208:0;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2263120	2272127	.	+	.	source_transcript=ENST00000850819.1;source_transcript_name=ENST00000850819;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850819.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850819.1,ENST00000850819.1;transcript_id=HG00140_ch_T0000208;gene_id=HG00140_ch_G0000045;Parent=HG00140_ch_T0000208;transcript_name=HG00140_ch_T0000208;gene_name=ENSG00000310557;ID=intron:HG00140_ch_T0000208:0;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2272128	2272254	.	+	.	source_transcript=ENST00000850819.1;source_transcript_name=ENST00000850819;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850819.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850819.1,ENST00000850819.1;transcript_id=HG00140_ch_T0000208;gene_id=HG00140_ch_G0000045;Parent=HG00140_ch_T0000208;transcript_name=HG00140_ch_T0000208;gene_name=ENSG00000310557;ID=exon:HG00140_ch_T0000208:1;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2272255	2272549	.	+	.	source_transcript=ENST00000850819.1;source_transcript_name=ENST00000850819;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850819.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850819.1,ENST00000850819.1;transcript_id=HG00140_ch_T0000208;gene_id=HG00140_ch_G0000045;Parent=HG00140_ch_T0000208;transcript_name=HG00140_ch_T0000208;gene_name=ENSG00000310557;ID=intron:HG00140_ch_T0000208:1;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2272550	2272672	.	+	.	source_transcript=ENST00000850819.1;source_transcript_name=ENST00000850819;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850819.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850819.1,ENST00000850819.1;transcript_id=HG00140_ch_T0000208;gene_id=HG00140_ch_G0000045;Parent=HG00140_ch_T0000208;transcript_name=HG00140_ch_T0000208;gene_name=ENSG00000310557;ID=exon:HG00140_ch_T0000208:2;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2272673	2276151	.	+	.	source_transcript=ENST00000850819.1;source_transcript_name=ENST00000850819;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850819.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850819.1,ENST00000850819.1;transcript_id=HG00140_ch_T0000208;gene_id=HG00140_ch_G0000045;Parent=HG00140_ch_T0000208;transcript_name=HG00140_ch_T0000208;gene_name=ENSG00000310557;ID=intron:HG00140_ch_T0000208:2;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2276152	2276314	.	+	.	source_transcript=ENST00000850819.1;source_transcript_name=ENST00000850819;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850819.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850819.1,ENST00000850819.1;transcript_id=HG00140_ch_T0000208;gene_id=HG00140_ch_G0000045;Parent=HG00140_ch_T0000208;transcript_name=HG00140_ch_T0000208;gene_name=ENSG00000310557;ID=exon:HG00140_ch_T0000208:3;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2276315	2285077	.	+	.	source_transcript=ENST00000850819.1;source_transcript_name=ENST00000850819;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850819.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850819.1,ENST00000850819.1;transcript_id=HG00140_ch_T0000208;gene_id=HG00140_ch_G0000045;Parent=HG00140_ch_T0000208;transcript_name=HG00140_ch_T0000208;gene_name=ENSG00000310557;ID=intron:HG00140_ch_T0000208:3;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2285078	2285284	.	+	.	source_transcript=ENST00000850819.1;source_transcript_name=ENST00000850819;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850819.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850819.1,ENST00000850819.1;transcript_id=HG00140_ch_T0000208;gene_id=HG00140_ch_G0000045;Parent=HG00140_ch_T0000208;transcript_name=HG00140_ch_T0000208;gene_name=ENSG00000310557;ID=exon:HG00140_ch_T0000208:4;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2263017	2282491	1000	+	.	source_transcript=ENST00000850821.1;source_transcript_name=ENST00000850821;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850821.1;transcript_score=299.873;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850821.1,ENST00000850821.1;transcript_id=HG00140_ch_T0000209;gene_id=HG00140_ch_G0000045;Parent=HG00140_ch_G0000045;transcript_name=HG00140_ch_T0000209;gene_name=ENSG00000310557;ID=HG00140_ch_T0000209;Name=ENSG00000310557
HG00140_chrY	CAT	exon	2263017	2263119	.	+	.	source_transcript=ENST00000850821.1;source_transcript_name=ENST00000850821;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850821.1;transcript_score=299.873;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850821.1,ENST00000850821.1;transcript_id=HG00140_ch_T0000209;gene_id=HG00140_ch_G0000045;Parent=HG00140_ch_T0000209;transcript_name=HG00140_ch_T0000209;gene_name=ENSG00000310557;ID=exon:HG00140_ch_T0000209:0;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2263120	2272127	.	+	.	source_transcript=ENST00000850821.1;source_transcript_name=ENST00000850821;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850821.1;transcript_score=299.873;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850821.1,ENST00000850821.1;transcript_id=HG00140_ch_T0000209;gene_id=HG00140_ch_G0000045;Parent=HG00140_ch_T0000209;transcript_name=HG00140_ch_T0000209;gene_name=ENSG00000310557;ID=intron:HG00140_ch_T0000209:0;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2272128	2272254	.	+	.	source_transcript=ENST00000850821.1;source_transcript_name=ENST00000850821;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850821.1;transcript_score=299.873;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850821.1,ENST00000850821.1;transcript_id=HG00140_ch_T0000209;gene_id=HG00140_ch_G0000045;Parent=HG00140_ch_T0000209;transcript_name=HG00140_ch_T0000209;gene_name=ENSG00000310557;ID=exon:HG00140_ch_T0000209:1;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2272255	2272597	.	+	.	source_transcript=ENST00000850821.1;source_transcript_name=ENST00000850821;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850821.1;transcript_score=299.873;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850821.1,ENST00000850821.1;transcript_id=HG00140_ch_T0000209;gene_id=HG00140_ch_G0000045;Parent=HG00140_ch_T0000209;transcript_name=HG00140_ch_T0000209;gene_name=ENSG00000310557;ID=intron:HG00140_ch_T0000209:1;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2272598	2272672	.	+	.	source_transcript=ENST00000850821.1;source_transcript_name=ENST00000850821;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850821.1;transcript_score=299.873;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850821.1,ENST00000850821.1;transcript_id=HG00140_ch_T0000209;gene_id=HG00140_ch_G0000045;Parent=HG00140_ch_T0000209;transcript_name=HG00140_ch_T0000209;gene_name=ENSG00000310557;ID=exon:HG00140_ch_T0000209:2;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2272673	2276151	.	+	.	source_transcript=ENST00000850821.1;source_transcript_name=ENST00000850821;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850821.1;transcript_score=299.873;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850821.1,ENST00000850821.1;transcript_id=HG00140_ch_T0000209;gene_id=HG00140_ch_G0000045;Parent=HG00140_ch_T0000209;transcript_name=HG00140_ch_T0000209;gene_name=ENSG00000310557;ID=intron:HG00140_ch_T0000209:2;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2276152	2276314	.	+	.	source_transcript=ENST00000850821.1;source_transcript_name=ENST00000850821;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850821.1;transcript_score=299.873;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850821.1,ENST00000850821.1;transcript_id=HG00140_ch_T0000209;gene_id=HG00140_ch_G0000045;Parent=HG00140_ch_T0000209;transcript_name=HG00140_ch_T0000209;gene_name=ENSG00000310557;ID=exon:HG00140_ch_T0000209:3;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2276315	2282170	.	+	.	source_transcript=ENST00000850821.1;source_transcript_name=ENST00000850821;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850821.1;transcript_score=299.873;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850821.1,ENST00000850821.1;transcript_id=HG00140_ch_T0000209;gene_id=HG00140_ch_G0000045;Parent=HG00140_ch_T0000209;transcript_name=HG00140_ch_T0000209;gene_name=ENSG00000310557;ID=intron:HG00140_ch_T0000209:3;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2282171	2282491	.	+	.	source_transcript=ENST00000850821.1;source_transcript_name=ENST00000850821;source_gene=ENSG00000310557.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310557.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850821.1;transcript_score=299.873;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310557;alternative_source_transcripts=ENST00000850821.1,ENST00000850821.1;transcript_id=HG00140_ch_T0000209;gene_id=HG00140_ch_G0000045;Parent=HG00140_ch_T0000209;transcript_name=HG00140_ch_T0000209;gene_name=ENSG00000310557;ID=exon:HG00140_ch_T0000209:4;Name=ENSG00000310557;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	2287659	2345933	.	+	.	source_gene_common_name=CD99P1;source_gene=ENSG00000292362.2;gene_id=HG00140_ch_G0000046;gene_biotype=lncRNA;gene_name=CD99P1;gene_sources=liftoff;ID=HG00140_ch_G0000046;Name=CD99P1
HG00140_chrY	CAT	transcript	2287659	2317865	1000	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000211;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000211;gene_name=CD99P1;ID=HG00140_ch_T0000211;Name=CD99P1
HG00140_chrY	CAT	exon	2287659	2287728	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000211;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000211;transcript_name=HG00140_ch_T0000211;gene_name=CD99P1;ID=exon:HG00140_ch_T0000211:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2287729	2290250	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000211;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000211;transcript_name=HG00140_ch_T0000211;gene_name=CD99P1;ID=intron:HG00140_ch_T0000211:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2290251	2290293	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000211;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000211;transcript_name=HG00140_ch_T0000211;gene_name=CD99P1;ID=exon:HG00140_ch_T0000211:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2290294	2291406	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000211;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000211;transcript_name=HG00140_ch_T0000211;gene_name=CD99P1;ID=intron:HG00140_ch_T0000211:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2291407	2291475	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000211;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000211;transcript_name=HG00140_ch_T0000211;gene_name=CD99P1;ID=exon:HG00140_ch_T0000211:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2291476	2295071	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000211;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000211;transcript_name=HG00140_ch_T0000211;gene_name=CD99P1;ID=intron:HG00140_ch_T0000211:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2295072	2295225	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000211;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000211;transcript_name=HG00140_ch_T0000211;gene_name=CD99P1;ID=exon:HG00140_ch_T0000211:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2295226	2297989	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000211;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000211;transcript_name=HG00140_ch_T0000211;gene_name=CD99P1;ID=intron:HG00140_ch_T0000211:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2297990	2298034	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000211;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000211;transcript_name=HG00140_ch_T0000211;gene_name=CD99P1;ID=exon:HG00140_ch_T0000211:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298035	2298678	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000211;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000211;transcript_name=HG00140_ch_T0000211;gene_name=CD99P1;ID=intron:HG00140_ch_T0000211:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2298679	2298747	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000211;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000211;transcript_name=HG00140_ch_T0000211;gene_name=CD99P1;ID=exon:HG00140_ch_T0000211:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298748	2302638	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000211;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000211;transcript_name=HG00140_ch_T0000211;gene_name=CD99P1;ID=intron:HG00140_ch_T0000211:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2302639	2302707	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000211;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000211;transcript_name=HG00140_ch_T0000211;gene_name=CD99P1;ID=exon:HG00140_ch_T0000211:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2302708	2305854	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000211;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000211;transcript_name=HG00140_ch_T0000211;gene_name=CD99P1;ID=intron:HG00140_ch_T0000211:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2305855	2305900	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000211;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000211;transcript_name=HG00140_ch_T0000211;gene_name=CD99P1;ID=exon:HG00140_ch_T0000211:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2305901	2317511	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000211;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000211;transcript_name=HG00140_ch_T0000211;gene_name=CD99P1;ID=intron:HG00140_ch_T0000211:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2317512	2317865	.	+	.	source_transcript=ENST00000850759.1;source_transcript_name=CD99P1-271;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850759.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850759.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000211;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000211;transcript_name=HG00140_ch_T0000211;gene_name=CD99P1;ID=exon:HG00140_ch_T0000211:8;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2288100	2317871	1000	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000213;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000213;gene_name=CD99P1;ID=HG00140_ch_T0000213;Name=CD99P1
HG00140_chrY	CAT	exon	2288100	2288222	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000213;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000213;transcript_name=HG00140_ch_T0000213;gene_name=CD99P1;ID=exon:HG00140_ch_T0000213:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2288223	2290250	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000213;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000213;transcript_name=HG00140_ch_T0000213;gene_name=CD99P1;ID=intron:HG00140_ch_T0000213:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2290251	2290293	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000213;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000213;transcript_name=HG00140_ch_T0000213;gene_name=CD99P1;ID=exon:HG00140_ch_T0000213:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2290294	2291406	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000213;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000213;transcript_name=HG00140_ch_T0000213;gene_name=CD99P1;ID=intron:HG00140_ch_T0000213:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2291407	2291475	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000213;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000213;transcript_name=HG00140_ch_T0000213;gene_name=CD99P1;ID=exon:HG00140_ch_T0000213:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2291476	2295071	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000213;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000213;transcript_name=HG00140_ch_T0000213;gene_name=CD99P1;ID=intron:HG00140_ch_T0000213:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2295072	2295225	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000213;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000213;transcript_name=HG00140_ch_T0000213;gene_name=CD99P1;ID=exon:HG00140_ch_T0000213:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2295226	2297989	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000213;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000213;transcript_name=HG00140_ch_T0000213;gene_name=CD99P1;ID=intron:HG00140_ch_T0000213:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2297990	2298034	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000213;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000213;transcript_name=HG00140_ch_T0000213;gene_name=CD99P1;ID=exon:HG00140_ch_T0000213:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298035	2298678	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000213;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000213;transcript_name=HG00140_ch_T0000213;gene_name=CD99P1;ID=intron:HG00140_ch_T0000213:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2298679	2298747	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000213;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000213;transcript_name=HG00140_ch_T0000213;gene_name=CD99P1;ID=exon:HG00140_ch_T0000213:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298748	2302638	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000213;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000213;transcript_name=HG00140_ch_T0000213;gene_name=CD99P1;ID=intron:HG00140_ch_T0000213:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2302639	2302707	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000213;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000213;transcript_name=HG00140_ch_T0000213;gene_name=CD99P1;ID=exon:HG00140_ch_T0000213:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2302708	2305854	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000213;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000213;transcript_name=HG00140_ch_T0000213;gene_name=CD99P1;ID=intron:HG00140_ch_T0000213:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2305855	2305900	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000213;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000213;transcript_name=HG00140_ch_T0000213;gene_name=CD99P1;ID=exon:HG00140_ch_T0000213:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2305901	2317511	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000213;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000213;transcript_name=HG00140_ch_T0000213;gene_name=CD99P1;ID=intron:HG00140_ch_T0000213:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2317512	2317871	.	+	.	source_transcript=ENST00000850760.1;source_transcript_name=CD99P1-272;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850760.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850760.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000213;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000213;transcript_name=HG00140_ch_T0000213;gene_name=CD99P1;ID=exon:HG00140_ch_T0000213:8;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2288128	2317873	1000	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000214;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000214;gene_name=CD99P1;ID=HG00140_ch_T0000214;Name=CD99P1
HG00140_chrY	CAT	exon	2288128	2288222	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000214;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000214;transcript_name=HG00140_ch_T0000214;gene_name=CD99P1;ID=exon:HG00140_ch_T0000214:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2288223	2290250	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000214;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000214;transcript_name=HG00140_ch_T0000214;gene_name=CD99P1;ID=intron:HG00140_ch_T0000214:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2290251	2290293	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000214;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000214;transcript_name=HG00140_ch_T0000214;gene_name=CD99P1;ID=exon:HG00140_ch_T0000214:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2290294	2291406	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000214;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000214;transcript_name=HG00140_ch_T0000214;gene_name=CD99P1;ID=intron:HG00140_ch_T0000214:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2291407	2291475	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000214;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000214;transcript_name=HG00140_ch_T0000214;gene_name=CD99P1;ID=exon:HG00140_ch_T0000214:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2291476	2295071	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000214;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000214;transcript_name=HG00140_ch_T0000214;gene_name=CD99P1;ID=intron:HG00140_ch_T0000214:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2295072	2295225	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000214;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000214;transcript_name=HG00140_ch_T0000214;gene_name=CD99P1;ID=exon:HG00140_ch_T0000214:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2295226	2297989	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000214;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000214;transcript_name=HG00140_ch_T0000214;gene_name=CD99P1;ID=intron:HG00140_ch_T0000214:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2297990	2298034	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000214;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000214;transcript_name=HG00140_ch_T0000214;gene_name=CD99P1;ID=exon:HG00140_ch_T0000214:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298035	2298678	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000214;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000214;transcript_name=HG00140_ch_T0000214;gene_name=CD99P1;ID=intron:HG00140_ch_T0000214:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2298679	2298747	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000214;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000214;transcript_name=HG00140_ch_T0000214;gene_name=CD99P1;ID=exon:HG00140_ch_T0000214:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298748	2301943	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000214;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000214;transcript_name=HG00140_ch_T0000214;gene_name=CD99P1;ID=intron:HG00140_ch_T0000214:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2301944	2301988	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000214;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000214;transcript_name=HG00140_ch_T0000214;gene_name=CD99P1;ID=exon:HG00140_ch_T0000214:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2301989	2302638	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000214;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000214;transcript_name=HG00140_ch_T0000214;gene_name=CD99P1;ID=intron:HG00140_ch_T0000214:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2302639	2302707	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000214;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000214;transcript_name=HG00140_ch_T0000214;gene_name=CD99P1;ID=exon:HG00140_ch_T0000214:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2302708	2305854	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000214;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000214;transcript_name=HG00140_ch_T0000214;gene_name=CD99P1;ID=intron:HG00140_ch_T0000214:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2305855	2305900	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000214;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000214;transcript_name=HG00140_ch_T0000214;gene_name=CD99P1;ID=exon:HG00140_ch_T0000214:8;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2305901	2317511	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000214;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000214;transcript_name=HG00140_ch_T0000214;gene_name=CD99P1;ID=intron:HG00140_ch_T0000214:8;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2317512	2317873	.	+	.	source_transcript=ENST00000850761.1;source_transcript_name=CD99P1-273;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850761.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000214;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000214;transcript_name=HG00140_ch_T0000214;gene_name=CD99P1;ID=exon:HG00140_ch_T0000214:9;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2288183	2302061	1000	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000215;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000215;gene_name=CD99P1;ID=HG00140_ch_T0000215;Name=CD99P1
HG00140_chrY	CAT	exon	2288183	2288222	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000215;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000215;transcript_name=HG00140_ch_T0000215;gene_name=CD99P1;ID=exon:HG00140_ch_T0000215:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2288223	2290250	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000215;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000215;transcript_name=HG00140_ch_T0000215;gene_name=CD99P1;ID=intron:HG00140_ch_T0000215:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2290251	2290293	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000215;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000215;transcript_name=HG00140_ch_T0000215;gene_name=CD99P1;ID=exon:HG00140_ch_T0000215:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2290294	2291406	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000215;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000215;transcript_name=HG00140_ch_T0000215;gene_name=CD99P1;ID=intron:HG00140_ch_T0000215:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2291407	2291475	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000215;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000215;transcript_name=HG00140_ch_T0000215;gene_name=CD99P1;ID=exon:HG00140_ch_T0000215:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2291476	2295071	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000215;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000215;transcript_name=HG00140_ch_T0000215;gene_name=CD99P1;ID=intron:HG00140_ch_T0000215:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2295072	2295225	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000215;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000215;transcript_name=HG00140_ch_T0000215;gene_name=CD99P1;ID=exon:HG00140_ch_T0000215:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2295226	2297989	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000215;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000215;transcript_name=HG00140_ch_T0000215;gene_name=CD99P1;ID=intron:HG00140_ch_T0000215:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2297990	2298034	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000215;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000215;transcript_name=HG00140_ch_T0000215;gene_name=CD99P1;ID=exon:HG00140_ch_T0000215:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298035	2298678	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000215;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000215;transcript_name=HG00140_ch_T0000215;gene_name=CD99P1;ID=intron:HG00140_ch_T0000215:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2298679	2298747	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000215;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000215;transcript_name=HG00140_ch_T0000215;gene_name=CD99P1;ID=exon:HG00140_ch_T0000215:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298748	2301943	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000215;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000215;transcript_name=HG00140_ch_T0000215;gene_name=CD99P1;ID=intron:HG00140_ch_T0000215:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2301944	2302061	.	+	.	source_transcript=ENST00000850792.1;source_transcript_name=CD99P1-304;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000215;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000215;transcript_name=HG00140_ch_T0000215;gene_name=CD99P1;ID=exon:HG00140_ch_T0000215:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2288585	2317873	1000	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000217;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000217;gene_name=CD99P1;ID=HG00140_ch_T0000217;Name=CD99P1
HG00140_chrY	CAT	exon	2288585	2288723	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000217;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000217;transcript_name=HG00140_ch_T0000217;gene_name=CD99P1;ID=exon:HG00140_ch_T0000217:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2288724	2290250	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000217;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000217;transcript_name=HG00140_ch_T0000217;gene_name=CD99P1;ID=intron:HG00140_ch_T0000217:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2290251	2290293	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000217;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000217;transcript_name=HG00140_ch_T0000217;gene_name=CD99P1;ID=exon:HG00140_ch_T0000217:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2290294	2291406	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000217;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000217;transcript_name=HG00140_ch_T0000217;gene_name=CD99P1;ID=intron:HG00140_ch_T0000217:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2291407	2291475	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000217;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000217;transcript_name=HG00140_ch_T0000217;gene_name=CD99P1;ID=exon:HG00140_ch_T0000217:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2291476	2297989	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000217;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000217;transcript_name=HG00140_ch_T0000217;gene_name=CD99P1;ID=intron:HG00140_ch_T0000217:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2297990	2298034	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000217;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000217;transcript_name=HG00140_ch_T0000217;gene_name=CD99P1;ID=exon:HG00140_ch_T0000217:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298035	2298678	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000217;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000217;transcript_name=HG00140_ch_T0000217;gene_name=CD99P1;ID=intron:HG00140_ch_T0000217:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2298679	2298747	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000217;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000217;transcript_name=HG00140_ch_T0000217;gene_name=CD99P1;ID=exon:HG00140_ch_T0000217:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298748	2302638	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000217;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000217;transcript_name=HG00140_ch_T0000217;gene_name=CD99P1;ID=intron:HG00140_ch_T0000217:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2302639	2302707	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000217;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000217;transcript_name=HG00140_ch_T0000217;gene_name=CD99P1;ID=exon:HG00140_ch_T0000217:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2302708	2305854	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000217;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000217;transcript_name=HG00140_ch_T0000217;gene_name=CD99P1;ID=intron:HG00140_ch_T0000217:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2305855	2305900	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000217;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000217;transcript_name=HG00140_ch_T0000217;gene_name=CD99P1;ID=exon:HG00140_ch_T0000217:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2305901	2317511	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000217;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000217;transcript_name=HG00140_ch_T0000217;gene_name=CD99P1;ID=intron:HG00140_ch_T0000217:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2317512	2317873	.	+	.	source_transcript=ENST00000850764.1;source_transcript_name=CD99P1-276;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000217;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000217;transcript_name=HG00140_ch_T0000217;gene_name=CD99P1;ID=exon:HG00140_ch_T0000217:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2288594	2317867	1000	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000218;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000218;gene_name=CD99P1;ID=HG00140_ch_T0000218;Name=CD99P1
HG00140_chrY	CAT	exon	2288594	2288723	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000218;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000218;transcript_name=HG00140_ch_T0000218;gene_name=CD99P1;ID=exon:HG00140_ch_T0000218:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2288724	2290250	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000218;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000218;transcript_name=HG00140_ch_T0000218;gene_name=CD99P1;ID=intron:HG00140_ch_T0000218:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2290251	2290293	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000218;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000218;transcript_name=HG00140_ch_T0000218;gene_name=CD99P1;ID=exon:HG00140_ch_T0000218:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2290294	2291406	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000218;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000218;transcript_name=HG00140_ch_T0000218;gene_name=CD99P1;ID=intron:HG00140_ch_T0000218:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2291407	2291475	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000218;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000218;transcript_name=HG00140_ch_T0000218;gene_name=CD99P1;ID=exon:HG00140_ch_T0000218:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2291476	2295071	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000218;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000218;transcript_name=HG00140_ch_T0000218;gene_name=CD99P1;ID=intron:HG00140_ch_T0000218:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2295072	2295225	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000218;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000218;transcript_name=HG00140_ch_T0000218;gene_name=CD99P1;ID=exon:HG00140_ch_T0000218:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2295226	2297989	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000218;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000218;transcript_name=HG00140_ch_T0000218;gene_name=CD99P1;ID=intron:HG00140_ch_T0000218:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2297990	2298034	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000218;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000218;transcript_name=HG00140_ch_T0000218;gene_name=CD99P1;ID=exon:HG00140_ch_T0000218:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298035	2298678	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000218;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000218;transcript_name=HG00140_ch_T0000218;gene_name=CD99P1;ID=intron:HG00140_ch_T0000218:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2298679	2298747	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000218;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000218;transcript_name=HG00140_ch_T0000218;gene_name=CD99P1;ID=exon:HG00140_ch_T0000218:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298748	2301943	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000218;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000218;transcript_name=HG00140_ch_T0000218;gene_name=CD99P1;ID=intron:HG00140_ch_T0000218:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2301944	2302707	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000218;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000218;transcript_name=HG00140_ch_T0000218;gene_name=CD99P1;ID=exon:HG00140_ch_T0000218:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2302708	2305854	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000218;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000218;transcript_name=HG00140_ch_T0000218;gene_name=CD99P1;ID=intron:HG00140_ch_T0000218:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2305855	2305900	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000218;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000218;transcript_name=HG00140_ch_T0000218;gene_name=CD99P1;ID=exon:HG00140_ch_T0000218:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2305901	2317511	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000218;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000218;transcript_name=HG00140_ch_T0000218;gene_name=CD99P1;ID=intron:HG00140_ch_T0000218:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2317512	2317867	.	+	.	source_transcript=ENST00000711245.1;source_transcript_name=CD99P1-258;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000218;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000218;transcript_name=HG00140_ch_T0000218;gene_name=CD99P1;ID=exon:HG00140_ch_T0000218:8;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2288596	2317874	1000	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000219;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000219;gene_name=CD99P1;ID=HG00140_ch_T0000219;Name=CD99P1
HG00140_chrY	CAT	exon	2288596	2288723	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000219;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000219;transcript_name=HG00140_ch_T0000219;gene_name=CD99P1;ID=exon:HG00140_ch_T0000219:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2288724	2290250	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000219;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000219;transcript_name=HG00140_ch_T0000219;gene_name=CD99P1;ID=intron:HG00140_ch_T0000219:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2290251	2290293	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000219;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000219;transcript_name=HG00140_ch_T0000219;gene_name=CD99P1;ID=exon:HG00140_ch_T0000219:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2290294	2291406	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000219;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000219;transcript_name=HG00140_ch_T0000219;gene_name=CD99P1;ID=intron:HG00140_ch_T0000219:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2291407	2291475	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000219;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000219;transcript_name=HG00140_ch_T0000219;gene_name=CD99P1;ID=exon:HG00140_ch_T0000219:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2291476	2295071	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000219;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000219;transcript_name=HG00140_ch_T0000219;gene_name=CD99P1;ID=intron:HG00140_ch_T0000219:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2295072	2295225	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000219;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000219;transcript_name=HG00140_ch_T0000219;gene_name=CD99P1;ID=exon:HG00140_ch_T0000219:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2295226	2297989	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000219;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000219;transcript_name=HG00140_ch_T0000219;gene_name=CD99P1;ID=intron:HG00140_ch_T0000219:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2297990	2298034	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000219;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000219;transcript_name=HG00140_ch_T0000219;gene_name=CD99P1;ID=exon:HG00140_ch_T0000219:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298035	2298678	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000219;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000219;transcript_name=HG00140_ch_T0000219;gene_name=CD99P1;ID=intron:HG00140_ch_T0000219:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2298679	2298747	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000219;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000219;transcript_name=HG00140_ch_T0000219;gene_name=CD99P1;ID=exon:HG00140_ch_T0000219:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298748	2301943	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000219;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000219;transcript_name=HG00140_ch_T0000219;gene_name=CD99P1;ID=intron:HG00140_ch_T0000219:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2301944	2301988	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000219;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000219;transcript_name=HG00140_ch_T0000219;gene_name=CD99P1;ID=exon:HG00140_ch_T0000219:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2301989	2302638	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000219;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000219;transcript_name=HG00140_ch_T0000219;gene_name=CD99P1;ID=intron:HG00140_ch_T0000219:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2302639	2302707	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000219;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000219;transcript_name=HG00140_ch_T0000219;gene_name=CD99P1;ID=exon:HG00140_ch_T0000219:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2302708	2305854	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000219;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000219;transcript_name=HG00140_ch_T0000219;gene_name=CD99P1;ID=intron:HG00140_ch_T0000219:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2305855	2305900	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000219;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000219;transcript_name=HG00140_ch_T0000219;gene_name=CD99P1;ID=exon:HG00140_ch_T0000219:8;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2305901	2317511	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000219;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000219;transcript_name=HG00140_ch_T0000219;gene_name=CD99P1;ID=intron:HG00140_ch_T0000219:8;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2317512	2317874	.	+	.	source_transcript=ENST00000850828.1;source_transcript_name=CD99P1-308;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850828.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000219;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000219;transcript_name=HG00140_ch_T0000219;gene_name=CD99P1;ID=exon:HG00140_ch_T0000219:9;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2288602	2317867	1000	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000220;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000220;gene_name=CD99P1;ID=HG00140_ch_T0000220;Name=CD99P1
HG00140_chrY	CAT	exon	2288602	2288723	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000220;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000220;transcript_name=HG00140_ch_T0000220;gene_name=CD99P1;ID=exon:HG00140_ch_T0000220:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2288724	2290250	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000220;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000220;transcript_name=HG00140_ch_T0000220;gene_name=CD99P1;ID=intron:HG00140_ch_T0000220:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2290251	2290293	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000220;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000220;transcript_name=HG00140_ch_T0000220;gene_name=CD99P1;ID=exon:HG00140_ch_T0000220:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2290294	2291406	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000220;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000220;transcript_name=HG00140_ch_T0000220;gene_name=CD99P1;ID=intron:HG00140_ch_T0000220:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2291407	2291475	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000220;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000220;transcript_name=HG00140_ch_T0000220;gene_name=CD99P1;ID=exon:HG00140_ch_T0000220:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2291476	2295071	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000220;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000220;transcript_name=HG00140_ch_T0000220;gene_name=CD99P1;ID=intron:HG00140_ch_T0000220:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2295072	2295225	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000220;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000220;transcript_name=HG00140_ch_T0000220;gene_name=CD99P1;ID=exon:HG00140_ch_T0000220:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2295226	2297989	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000220;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000220;transcript_name=HG00140_ch_T0000220;gene_name=CD99P1;ID=intron:HG00140_ch_T0000220:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2297990	2298034	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000220;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000220;transcript_name=HG00140_ch_T0000220;gene_name=CD99P1;ID=exon:HG00140_ch_T0000220:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298035	2298678	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000220;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000220;transcript_name=HG00140_ch_T0000220;gene_name=CD99P1;ID=intron:HG00140_ch_T0000220:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2298679	2298747	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000220;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000220;transcript_name=HG00140_ch_T0000220;gene_name=CD99P1;ID=exon:HG00140_ch_T0000220:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298748	2301943	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000220;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000220;transcript_name=HG00140_ch_T0000220;gene_name=CD99P1;ID=intron:HG00140_ch_T0000220:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2301944	2301988	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000220;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000220;transcript_name=HG00140_ch_T0000220;gene_name=CD99P1;ID=exon:HG00140_ch_T0000220:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2301989	2302638	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000220;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000220;transcript_name=HG00140_ch_T0000220;gene_name=CD99P1;ID=intron:HG00140_ch_T0000220:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2302639	2302707	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000220;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000220;transcript_name=HG00140_ch_T0000220;gene_name=CD99P1;ID=exon:HG00140_ch_T0000220:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2302708	2317511	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000220;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000220;transcript_name=HG00140_ch_T0000220;gene_name=CD99P1;ID=intron:HG00140_ch_T0000220:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2317512	2317867	.	+	.	source_transcript=ENST00000850766.1;source_transcript_name=CD99P1-278;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850766.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850766.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000220;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000220;transcript_name=HG00140_ch_T0000220;gene_name=CD99P1;ID=exon:HG00140_ch_T0000220:8;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2288602	2317867	1000	+	.	source_transcript=ENST00000850765.1;source_transcript_name=CD99P1-277;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850765.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850765.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000221;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000221;gene_name=CD99P1;ID=HG00140_ch_T0000221;Name=CD99P1
HG00140_chrY	CAT	exon	2288602	2288723	.	+	.	source_transcript=ENST00000850765.1;source_transcript_name=CD99P1-277;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850765.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850765.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000221;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000221;transcript_name=HG00140_ch_T0000221;gene_name=CD99P1;ID=exon:HG00140_ch_T0000221:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2288724	2290250	.	+	.	source_transcript=ENST00000850765.1;source_transcript_name=CD99P1-277;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850765.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850765.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000221;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000221;transcript_name=HG00140_ch_T0000221;gene_name=CD99P1;ID=intron:HG00140_ch_T0000221:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2290251	2290293	.	+	.	source_transcript=ENST00000850765.1;source_transcript_name=CD99P1-277;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850765.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850765.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000221;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000221;transcript_name=HG00140_ch_T0000221;gene_name=CD99P1;ID=exon:HG00140_ch_T0000221:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2290294	2291406	.	+	.	source_transcript=ENST00000850765.1;source_transcript_name=CD99P1-277;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850765.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850765.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000221;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000221;transcript_name=HG00140_ch_T0000221;gene_name=CD99P1;ID=intron:HG00140_ch_T0000221:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2291407	2291475	.	+	.	source_transcript=ENST00000850765.1;source_transcript_name=CD99P1-277;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850765.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850765.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000221;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000221;transcript_name=HG00140_ch_T0000221;gene_name=CD99P1;ID=exon:HG00140_ch_T0000221:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2291476	2317511	.	+	.	source_transcript=ENST00000850765.1;source_transcript_name=CD99P1-277;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850765.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850765.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000221;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000221;transcript_name=HG00140_ch_T0000221;gene_name=CD99P1;ID=intron:HG00140_ch_T0000221:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2317512	2317867	.	+	.	source_transcript=ENST00000850765.1;source_transcript_name=CD99P1-277;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850765.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850765.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000221;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000221;transcript_name=HG00140_ch_T0000221;gene_name=CD99P1;ID=exon:HG00140_ch_T0000221:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2288602	2318262	1000	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000222;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000222;gene_name=CD99P1;ID=HG00140_ch_T0000222;Name=CD99P1
HG00140_chrY	CAT	exon	2288602	2288723	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000222;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000222;transcript_name=HG00140_ch_T0000222;gene_name=CD99P1;ID=exon:HG00140_ch_T0000222:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2288724	2290250	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000222;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000222;transcript_name=HG00140_ch_T0000222;gene_name=CD99P1;ID=intron:HG00140_ch_T0000222:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2290251	2290293	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000222;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000222;transcript_name=HG00140_ch_T0000222;gene_name=CD99P1;ID=exon:HG00140_ch_T0000222:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2290294	2291406	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000222;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000222;transcript_name=HG00140_ch_T0000222;gene_name=CD99P1;ID=intron:HG00140_ch_T0000222:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2291407	2291475	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000222;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000222;transcript_name=HG00140_ch_T0000222;gene_name=CD99P1;ID=exon:HG00140_ch_T0000222:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2291476	2295071	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000222;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000222;transcript_name=HG00140_ch_T0000222;gene_name=CD99P1;ID=intron:HG00140_ch_T0000222:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2295072	2295225	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000222;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000222;transcript_name=HG00140_ch_T0000222;gene_name=CD99P1;ID=exon:HG00140_ch_T0000222:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2295226	2297989	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000222;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000222;transcript_name=HG00140_ch_T0000222;gene_name=CD99P1;ID=intron:HG00140_ch_T0000222:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2297990	2298034	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000222;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000222;transcript_name=HG00140_ch_T0000222;gene_name=CD99P1;ID=exon:HG00140_ch_T0000222:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298035	2298678	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000222;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000222;transcript_name=HG00140_ch_T0000222;gene_name=CD99P1;ID=intron:HG00140_ch_T0000222:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2298679	2298747	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000222;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000222;transcript_name=HG00140_ch_T0000222;gene_name=CD99P1;ID=exon:HG00140_ch_T0000222:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298748	2302638	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000222;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000222;transcript_name=HG00140_ch_T0000222;gene_name=CD99P1;ID=intron:HG00140_ch_T0000222:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2302639	2302707	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000222;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000222;transcript_name=HG00140_ch_T0000222;gene_name=CD99P1;ID=exon:HG00140_ch_T0000222:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2302708	2305854	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000222;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000222;transcript_name=HG00140_ch_T0000222;gene_name=CD99P1;ID=intron:HG00140_ch_T0000222:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2305855	2305900	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000222;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000222;transcript_name=HG00140_ch_T0000222;gene_name=CD99P1;ID=exon:HG00140_ch_T0000222:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2305901	2317511	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000222;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000222;transcript_name=HG00140_ch_T0000222;gene_name=CD99P1;ID=intron:HG00140_ch_T0000222:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2317512	2318262	.	+	.	source_transcript=ENST00000850834.1;source_transcript_name=CD99P1-310;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000222;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000222;transcript_name=HG00140_ch_T0000222;gene_name=CD99P1;ID=exon:HG00140_ch_T0000222:8;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2288602	2338582	1000	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000223;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000223;gene_name=CD99P1;ID=HG00140_ch_T0000223;Name=CD99P1
HG00140_chrY	CAT	exon	2288602	2288723	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000223;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000223;transcript_name=HG00140_ch_T0000223;gene_name=CD99P1;ID=exon:HG00140_ch_T0000223:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2288724	2290250	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000223;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000223;transcript_name=HG00140_ch_T0000223;gene_name=CD99P1;ID=intron:HG00140_ch_T0000223:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2290251	2290293	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000223;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000223;transcript_name=HG00140_ch_T0000223;gene_name=CD99P1;ID=exon:HG00140_ch_T0000223:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2290294	2291406	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000223;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000223;transcript_name=HG00140_ch_T0000223;gene_name=CD99P1;ID=intron:HG00140_ch_T0000223:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2291407	2291475	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000223;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000223;transcript_name=HG00140_ch_T0000223;gene_name=CD99P1;ID=exon:HG00140_ch_T0000223:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2291476	2295071	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000223;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000223;transcript_name=HG00140_ch_T0000223;gene_name=CD99P1;ID=intron:HG00140_ch_T0000223:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2295072	2295225	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000223;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000223;transcript_name=HG00140_ch_T0000223;gene_name=CD99P1;ID=exon:HG00140_ch_T0000223:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2295226	2297989	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000223;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000223;transcript_name=HG00140_ch_T0000223;gene_name=CD99P1;ID=intron:HG00140_ch_T0000223:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2297990	2298034	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000223;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000223;transcript_name=HG00140_ch_T0000223;gene_name=CD99P1;ID=exon:HG00140_ch_T0000223:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298035	2298678	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000223;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000223;transcript_name=HG00140_ch_T0000223;gene_name=CD99P1;ID=intron:HG00140_ch_T0000223:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2298679	2298747	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000223;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000223;transcript_name=HG00140_ch_T0000223;gene_name=CD99P1;ID=exon:HG00140_ch_T0000223:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298748	2302638	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000223;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000223;transcript_name=HG00140_ch_T0000223;gene_name=CD99P1;ID=intron:HG00140_ch_T0000223:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2302639	2302707	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000223;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000223;transcript_name=HG00140_ch_T0000223;gene_name=CD99P1;ID=exon:HG00140_ch_T0000223:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2302708	2305854	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000223;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000223;transcript_name=HG00140_ch_T0000223;gene_name=CD99P1;ID=intron:HG00140_ch_T0000223:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2305855	2305900	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000223;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000223;transcript_name=HG00140_ch_T0000223;gene_name=CD99P1;ID=exon:HG00140_ch_T0000223:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2305901	2338026	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000223;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000223;transcript_name=HG00140_ch_T0000223;gene_name=CD99P1;ID=intron:HG00140_ch_T0000223:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2338027	2338582	.	+	.	source_transcript=ENST00000850752.1;source_transcript_name=CD99P1-264;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850752.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850752.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000223;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000223;transcript_name=HG00140_ch_T0000223;gene_name=CD99P1;ID=exon:HG00140_ch_T0000223:8;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2288602	2296756	1000	+	.	source_transcript=ENST00000850829.1;source_transcript_name=CD99P1-309;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850829.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850829.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000224;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000224;gene_name=CD99P1;ID=HG00140_ch_T0000224;Name=CD99P1
HG00140_chrY	CAT	exon	2288602	2288723	.	+	.	source_transcript=ENST00000850829.1;source_transcript_name=CD99P1-309;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850829.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850829.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000224;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000224;transcript_name=HG00140_ch_T0000224;gene_name=CD99P1;ID=exon:HG00140_ch_T0000224:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2288724	2290250	.	+	.	source_transcript=ENST00000850829.1;source_transcript_name=CD99P1-309;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850829.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850829.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000224;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000224;transcript_name=HG00140_ch_T0000224;gene_name=CD99P1;ID=intron:HG00140_ch_T0000224:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2290251	2290293	.	+	.	source_transcript=ENST00000850829.1;source_transcript_name=CD99P1-309;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850829.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850829.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000224;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000224;transcript_name=HG00140_ch_T0000224;gene_name=CD99P1;ID=exon:HG00140_ch_T0000224:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2290294	2291406	.	+	.	source_transcript=ENST00000850829.1;source_transcript_name=CD99P1-309;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850829.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850829.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000224;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000224;transcript_name=HG00140_ch_T0000224;gene_name=CD99P1;ID=intron:HG00140_ch_T0000224:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2291407	2291475	.	+	.	source_transcript=ENST00000850829.1;source_transcript_name=CD99P1-309;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850829.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850829.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000224;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000224;transcript_name=HG00140_ch_T0000224;gene_name=CD99P1;ID=exon:HG00140_ch_T0000224:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2291476	2295071	.	+	.	source_transcript=ENST00000850829.1;source_transcript_name=CD99P1-309;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850829.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850829.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000224;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000224;transcript_name=HG00140_ch_T0000224;gene_name=CD99P1;ID=intron:HG00140_ch_T0000224:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2295072	2296756	.	+	.	source_transcript=ENST00000850829.1;source_transcript_name=CD99P1-309;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850829.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850829.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000224;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000224;transcript_name=HG00140_ch_T0000224;gene_name=CD99P1;ID=exon:HG00140_ch_T0000224:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2288611	2317873	1000	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000225;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000225;gene_name=CD99P1;ID=HG00140_ch_T0000225;Name=CD99P1
HG00140_chrY	CAT	exon	2288611	2288723	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000225;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000225;transcript_name=HG00140_ch_T0000225;gene_name=CD99P1;ID=exon:HG00140_ch_T0000225:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2288724	2290250	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000225;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000225;transcript_name=HG00140_ch_T0000225;gene_name=CD99P1;ID=intron:HG00140_ch_T0000225:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2290251	2290293	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000225;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000225;transcript_name=HG00140_ch_T0000225;gene_name=CD99P1;ID=exon:HG00140_ch_T0000225:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2290294	2291406	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000225;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000225;transcript_name=HG00140_ch_T0000225;gene_name=CD99P1;ID=intron:HG00140_ch_T0000225:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2291407	2291475	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000225;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000225;transcript_name=HG00140_ch_T0000225;gene_name=CD99P1;ID=exon:HG00140_ch_T0000225:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2291476	2295071	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000225;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000225;transcript_name=HG00140_ch_T0000225;gene_name=CD99P1;ID=intron:HG00140_ch_T0000225:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2295072	2295225	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000225;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000225;transcript_name=HG00140_ch_T0000225;gene_name=CD99P1;ID=exon:HG00140_ch_T0000225:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2295226	2297989	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000225;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000225;transcript_name=HG00140_ch_T0000225;gene_name=CD99P1;ID=intron:HG00140_ch_T0000225:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2297990	2298034	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000225;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000225;transcript_name=HG00140_ch_T0000225;gene_name=CD99P1;ID=exon:HG00140_ch_T0000225:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298035	2298678	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000225;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000225;transcript_name=HG00140_ch_T0000225;gene_name=CD99P1;ID=intron:HG00140_ch_T0000225:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2298679	2298747	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000225;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000225;transcript_name=HG00140_ch_T0000225;gene_name=CD99P1;ID=exon:HG00140_ch_T0000225:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298748	2317511	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000225;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000225;transcript_name=HG00140_ch_T0000225;gene_name=CD99P1;ID=intron:HG00140_ch_T0000225:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2317512	2317873	.	+	.	source_transcript=ENST00000850767.1;source_transcript_name=CD99P1-279;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850767.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000225;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000225;transcript_name=HG00140_ch_T0000225;gene_name=CD99P1;ID=exon:HG00140_ch_T0000225:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2288618	2318262	1000	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000226;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000226;gene_name=CD99P1;ID=HG00140_ch_T0000226;Name=CD99P1
HG00140_chrY	CAT	exon	2288618	2288723	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000226;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000226;transcript_name=HG00140_ch_T0000226;gene_name=CD99P1;ID=exon:HG00140_ch_T0000226:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2288724	2290250	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000226;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000226;transcript_name=HG00140_ch_T0000226;gene_name=CD99P1;ID=intron:HG00140_ch_T0000226:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2290251	2290293	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000226;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000226;transcript_name=HG00140_ch_T0000226;gene_name=CD99P1;ID=exon:HG00140_ch_T0000226:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2290294	2291406	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000226;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000226;transcript_name=HG00140_ch_T0000226;gene_name=CD99P1;ID=intron:HG00140_ch_T0000226:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2291407	2291475	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000226;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000226;transcript_name=HG00140_ch_T0000226;gene_name=CD99P1;ID=exon:HG00140_ch_T0000226:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2291476	2297989	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000226;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000226;transcript_name=HG00140_ch_T0000226;gene_name=CD99P1;ID=intron:HG00140_ch_T0000226:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2297990	2298034	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000226;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000226;transcript_name=HG00140_ch_T0000226;gene_name=CD99P1;ID=exon:HG00140_ch_T0000226:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298035	2298678	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000226;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000226;transcript_name=HG00140_ch_T0000226;gene_name=CD99P1;ID=intron:HG00140_ch_T0000226:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2298679	2298747	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000226;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000226;transcript_name=HG00140_ch_T0000226;gene_name=CD99P1;ID=exon:HG00140_ch_T0000226:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298748	2301943	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000226;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000226;transcript_name=HG00140_ch_T0000226;gene_name=CD99P1;ID=intron:HG00140_ch_T0000226:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2301944	2301988	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000226;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000226;transcript_name=HG00140_ch_T0000226;gene_name=CD99P1;ID=exon:HG00140_ch_T0000226:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2301989	2302638	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000226;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000226;transcript_name=HG00140_ch_T0000226;gene_name=CD99P1;ID=intron:HG00140_ch_T0000226:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2302639	2302707	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000226;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000226;transcript_name=HG00140_ch_T0000226;gene_name=CD99P1;ID=exon:HG00140_ch_T0000226:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2302708	2305854	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000226;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000226;transcript_name=HG00140_ch_T0000226;gene_name=CD99P1;ID=intron:HG00140_ch_T0000226:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2305855	2305900	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000226;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000226;transcript_name=HG00140_ch_T0000226;gene_name=CD99P1;ID=exon:HG00140_ch_T0000226:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2305901	2317511	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000226;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000226;transcript_name=HG00140_ch_T0000226;gene_name=CD99P1;ID=intron:HG00140_ch_T0000226:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2317512	2318262	.	+	.	source_transcript=ENST00000850762.1;source_transcript_name=CD99P1-274;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000226;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000226;transcript_name=HG00140_ch_T0000226;gene_name=CD99P1;ID=exon:HG00140_ch_T0000226:8;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2288618	2317873	1000	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000227;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000227;gene_name=CD99P1;ID=HG00140_ch_T0000227;Name=CD99P1
HG00140_chrY	CAT	exon	2288618	2288723	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000227;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000227;transcript_name=HG00140_ch_T0000227;gene_name=CD99P1;ID=exon:HG00140_ch_T0000227:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2288724	2290250	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000227;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000227;transcript_name=HG00140_ch_T0000227;gene_name=CD99P1;ID=intron:HG00140_ch_T0000227:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2290251	2290293	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000227;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000227;transcript_name=HG00140_ch_T0000227;gene_name=CD99P1;ID=exon:HG00140_ch_T0000227:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2290294	2291406	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000227;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000227;transcript_name=HG00140_ch_T0000227;gene_name=CD99P1;ID=intron:HG00140_ch_T0000227:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2291407	2291475	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000227;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000227;transcript_name=HG00140_ch_T0000227;gene_name=CD99P1;ID=exon:HG00140_ch_T0000227:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2291476	2295071	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000227;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000227;transcript_name=HG00140_ch_T0000227;gene_name=CD99P1;ID=intron:HG00140_ch_T0000227:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2295072	2295225	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000227;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000227;transcript_name=HG00140_ch_T0000227;gene_name=CD99P1;ID=exon:HG00140_ch_T0000227:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2295226	2297989	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000227;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000227;transcript_name=HG00140_ch_T0000227;gene_name=CD99P1;ID=intron:HG00140_ch_T0000227:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2297990	2298034	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000227;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000227;transcript_name=HG00140_ch_T0000227;gene_name=CD99P1;ID=exon:HG00140_ch_T0000227:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298035	2298678	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000227;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000227;transcript_name=HG00140_ch_T0000227;gene_name=CD99P1;ID=intron:HG00140_ch_T0000227:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2298679	2298747	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000227;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000227;transcript_name=HG00140_ch_T0000227;gene_name=CD99P1;ID=exon:HG00140_ch_T0000227:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298748	2302638	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000227;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000227;transcript_name=HG00140_ch_T0000227;gene_name=CD99P1;ID=intron:HG00140_ch_T0000227:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2302639	2302707	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000227;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000227;transcript_name=HG00140_ch_T0000227;gene_name=CD99P1;ID=exon:HG00140_ch_T0000227:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2302708	2317511	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000227;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000227;transcript_name=HG00140_ch_T0000227;gene_name=CD99P1;ID=intron:HG00140_ch_T0000227:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2317512	2317873	.	+	.	source_transcript=ENST00000850768.1;source_transcript_name=CD99P1-280;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850768.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000227;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000227;transcript_name=HG00140_ch_T0000227;gene_name=CD99P1;ID=exon:HG00140_ch_T0000227:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2288618	2345932	1000	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000228;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000228;gene_name=CD99P1;ID=HG00140_ch_T0000228;Name=CD99P1
HG00140_chrY	CAT	exon	2288618	2288723	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000228;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000228;transcript_name=HG00140_ch_T0000228;gene_name=CD99P1;ID=exon:HG00140_ch_T0000228:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2288724	2290250	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000228;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000228;transcript_name=HG00140_ch_T0000228;gene_name=CD99P1;ID=intron:HG00140_ch_T0000228:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2290251	2290293	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000228;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000228;transcript_name=HG00140_ch_T0000228;gene_name=CD99P1;ID=exon:HG00140_ch_T0000228:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2290294	2291406	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000228;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000228;transcript_name=HG00140_ch_T0000228;gene_name=CD99P1;ID=intron:HG00140_ch_T0000228:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2291407	2291475	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000228;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000228;transcript_name=HG00140_ch_T0000228;gene_name=CD99P1;ID=exon:HG00140_ch_T0000228:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2291476	2295071	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000228;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000228;transcript_name=HG00140_ch_T0000228;gene_name=CD99P1;ID=intron:HG00140_ch_T0000228:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2295072	2295225	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000228;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000228;transcript_name=HG00140_ch_T0000228;gene_name=CD99P1;ID=exon:HG00140_ch_T0000228:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2295226	2297989	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000228;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000228;transcript_name=HG00140_ch_T0000228;gene_name=CD99P1;ID=intron:HG00140_ch_T0000228:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2297990	2298034	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000228;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000228;transcript_name=HG00140_ch_T0000228;gene_name=CD99P1;ID=exon:HG00140_ch_T0000228:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298035	2298678	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000228;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000228;transcript_name=HG00140_ch_T0000228;gene_name=CD99P1;ID=intron:HG00140_ch_T0000228:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2298679	2298747	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000228;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000228;transcript_name=HG00140_ch_T0000228;gene_name=CD99P1;ID=exon:HG00140_ch_T0000228:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298748	2301943	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000228;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000228;transcript_name=HG00140_ch_T0000228;gene_name=CD99P1;ID=intron:HG00140_ch_T0000228:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2301944	2301988	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000228;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000228;transcript_name=HG00140_ch_T0000228;gene_name=CD99P1;ID=exon:HG00140_ch_T0000228:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2301989	2302638	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000228;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000228;transcript_name=HG00140_ch_T0000228;gene_name=CD99P1;ID=intron:HG00140_ch_T0000228:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2302639	2302707	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000228;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000228;transcript_name=HG00140_ch_T0000228;gene_name=CD99P1;ID=exon:HG00140_ch_T0000228:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2302708	2305854	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000228;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000228;transcript_name=HG00140_ch_T0000228;gene_name=CD99P1;ID=intron:HG00140_ch_T0000228:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2305855	2305900	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000228;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000228;transcript_name=HG00140_ch_T0000228;gene_name=CD99P1;ID=exon:HG00140_ch_T0000228:8;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2305901	2345412	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000228;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000228;transcript_name=HG00140_ch_T0000228;gene_name=CD99P1;ID=intron:HG00140_ch_T0000228:8;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2345413	2345932	.	+	.	source_transcript=ENST00000850750.1;source_transcript_name=CD99P1-262;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000228;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000228;transcript_name=HG00140_ch_T0000228;gene_name=CD99P1;ID=exon:HG00140_ch_T0000228:9;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2288628	2317867	1000	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000229;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000229;gene_name=CD99P1;ID=HG00140_ch_T0000229;Name=CD99P1
HG00140_chrY	CAT	exon	2288628	2288723	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000229;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000229;transcript_name=HG00140_ch_T0000229;gene_name=CD99P1;ID=exon:HG00140_ch_T0000229:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2288724	2290250	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000229;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000229;transcript_name=HG00140_ch_T0000229;gene_name=CD99P1;ID=intron:HG00140_ch_T0000229:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2290251	2290293	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000229;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000229;transcript_name=HG00140_ch_T0000229;gene_name=CD99P1;ID=exon:HG00140_ch_T0000229:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2290294	2291406	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000229;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000229;transcript_name=HG00140_ch_T0000229;gene_name=CD99P1;ID=intron:HG00140_ch_T0000229:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2291407	2291475	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000229;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000229;transcript_name=HG00140_ch_T0000229;gene_name=CD99P1;ID=exon:HG00140_ch_T0000229:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2291476	2295071	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000229;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000229;transcript_name=HG00140_ch_T0000229;gene_name=CD99P1;ID=intron:HG00140_ch_T0000229:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2295072	2295225	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000229;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000229;transcript_name=HG00140_ch_T0000229;gene_name=CD99P1;ID=exon:HG00140_ch_T0000229:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2295226	2298007	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000229;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000229;transcript_name=HG00140_ch_T0000229;gene_name=CD99P1;ID=intron:HG00140_ch_T0000229:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2298008	2298034	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000229;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000229;transcript_name=HG00140_ch_T0000229;gene_name=CD99P1;ID=exon:HG00140_ch_T0000229:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298035	2298678	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000229;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000229;transcript_name=HG00140_ch_T0000229;gene_name=CD99P1;ID=intron:HG00140_ch_T0000229:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2298679	2298747	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000229;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000229;transcript_name=HG00140_ch_T0000229;gene_name=CD99P1;ID=exon:HG00140_ch_T0000229:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298748	2302638	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000229;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000229;transcript_name=HG00140_ch_T0000229;gene_name=CD99P1;ID=intron:HG00140_ch_T0000229:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2302639	2302707	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000229;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000229;transcript_name=HG00140_ch_T0000229;gene_name=CD99P1;ID=exon:HG00140_ch_T0000229:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2302708	2305854	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000229;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000229;transcript_name=HG00140_ch_T0000229;gene_name=CD99P1;ID=intron:HG00140_ch_T0000229:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2305855	2305900	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000229;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000229;transcript_name=HG00140_ch_T0000229;gene_name=CD99P1;ID=exon:HG00140_ch_T0000229:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2305901	2317511	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000229;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000229;transcript_name=HG00140_ch_T0000229;gene_name=CD99P1;ID=intron:HG00140_ch_T0000229:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2317512	2317867	.	+	.	source_transcript=ENST00000711248.1;source_transcript_name=CD99P1-259;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711248.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000229;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000229;transcript_name=HG00140_ch_T0000229;gene_name=CD99P1;ID=exon:HG00140_ch_T0000229:8;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2288628	2318259	1000	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000230;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000230;gene_name=CD99P1;ID=HG00140_ch_T0000230;Name=CD99P1
HG00140_chrY	CAT	exon	2288628	2288723	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000230;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000230;transcript_name=HG00140_ch_T0000230;gene_name=CD99P1;ID=exon:HG00140_ch_T0000230:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2288724	2290250	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000230;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000230;transcript_name=HG00140_ch_T0000230;gene_name=CD99P1;ID=intron:HG00140_ch_T0000230:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2290251	2290293	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000230;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000230;transcript_name=HG00140_ch_T0000230;gene_name=CD99P1;ID=exon:HG00140_ch_T0000230:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2290294	2291406	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000230;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000230;transcript_name=HG00140_ch_T0000230;gene_name=CD99P1;ID=intron:HG00140_ch_T0000230:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2291407	2291475	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000230;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000230;transcript_name=HG00140_ch_T0000230;gene_name=CD99P1;ID=exon:HG00140_ch_T0000230:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2291476	2295071	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000230;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000230;transcript_name=HG00140_ch_T0000230;gene_name=CD99P1;ID=intron:HG00140_ch_T0000230:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2295072	2295225	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000230;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000230;transcript_name=HG00140_ch_T0000230;gene_name=CD99P1;ID=exon:HG00140_ch_T0000230:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2295226	2297989	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000230;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000230;transcript_name=HG00140_ch_T0000230;gene_name=CD99P1;ID=intron:HG00140_ch_T0000230:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2297990	2298034	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000230;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000230;transcript_name=HG00140_ch_T0000230;gene_name=CD99P1;ID=exon:HG00140_ch_T0000230:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298035	2298643	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000230;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000230;transcript_name=HG00140_ch_T0000230;gene_name=CD99P1;ID=intron:HG00140_ch_T0000230:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2298644	2298747	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000230;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000230;transcript_name=HG00140_ch_T0000230;gene_name=CD99P1;ID=exon:HG00140_ch_T0000230:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298748	2302638	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000230;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000230;transcript_name=HG00140_ch_T0000230;gene_name=CD99P1;ID=intron:HG00140_ch_T0000230:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2302639	2302707	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000230;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000230;transcript_name=HG00140_ch_T0000230;gene_name=CD99P1;ID=exon:HG00140_ch_T0000230:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2302708	2305854	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000230;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000230;transcript_name=HG00140_ch_T0000230;gene_name=CD99P1;ID=intron:HG00140_ch_T0000230:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2305855	2305900	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000230;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000230;transcript_name=HG00140_ch_T0000230;gene_name=CD99P1;ID=exon:HG00140_ch_T0000230:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2305901	2317511	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000230;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000230;transcript_name=HG00140_ch_T0000230;gene_name=CD99P1;ID=intron:HG00140_ch_T0000230:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2317512	2318259	.	+	.	source_transcript=ENST00000850763.1;source_transcript_name=CD99P1-275;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850763.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000230;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000230;transcript_name=HG00140_ch_T0000230;gene_name=CD99P1;ID=exon:HG00140_ch_T0000230:8;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2288630	2317871	1000	+	.	source_transcript=ENST00000850769.1;source_transcript_name=CD99P1-281;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850769.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850769.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000231;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000231;gene_name=CD99P1;ID=HG00140_ch_T0000231;Name=CD99P1
HG00140_chrY	CAT	exon	2288630	2288723	.	+	.	source_transcript=ENST00000850769.1;source_transcript_name=CD99P1-281;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850769.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850769.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000231;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000231;transcript_name=HG00140_ch_T0000231;gene_name=CD99P1;ID=exon:HG00140_ch_T0000231:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2288724	2317511	.	+	.	source_transcript=ENST00000850769.1;source_transcript_name=CD99P1-281;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850769.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850769.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000231;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000231;transcript_name=HG00140_ch_T0000231;gene_name=CD99P1;ID=intron:HG00140_ch_T0000231:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2317512	2317871	.	+	.	source_transcript=ENST00000850769.1;source_transcript_name=CD99P1-281;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850769.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850769.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000231;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000231;transcript_name=HG00140_ch_T0000231;gene_name=CD99P1;ID=exon:HG00140_ch_T0000231:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2288635	2338433	1000	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000232;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000232;gene_name=CD99P1;ID=HG00140_ch_T0000232;Name=CD99P1
HG00140_chrY	CAT	exon	2288635	2288723	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000232;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000232;transcript_name=HG00140_ch_T0000232;gene_name=CD99P1;ID=exon:HG00140_ch_T0000232:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2288724	2290250	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000232;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000232;transcript_name=HG00140_ch_T0000232;gene_name=CD99P1;ID=intron:HG00140_ch_T0000232:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2290251	2290293	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000232;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000232;transcript_name=HG00140_ch_T0000232;gene_name=CD99P1;ID=exon:HG00140_ch_T0000232:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2290294	2291406	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000232;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000232;transcript_name=HG00140_ch_T0000232;gene_name=CD99P1;ID=intron:HG00140_ch_T0000232:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2291407	2291475	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000232;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000232;transcript_name=HG00140_ch_T0000232;gene_name=CD99P1;ID=exon:HG00140_ch_T0000232:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2291476	2295071	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000232;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000232;transcript_name=HG00140_ch_T0000232;gene_name=CD99P1;ID=intron:HG00140_ch_T0000232:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2295072	2295225	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000232;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000232;transcript_name=HG00140_ch_T0000232;gene_name=CD99P1;ID=exon:HG00140_ch_T0000232:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2295226	2297989	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000232;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000232;transcript_name=HG00140_ch_T0000232;gene_name=CD99P1;ID=intron:HG00140_ch_T0000232:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2297990	2298034	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000232;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000232;transcript_name=HG00140_ch_T0000232;gene_name=CD99P1;ID=exon:HG00140_ch_T0000232:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298035	2298678	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000232;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000232;transcript_name=HG00140_ch_T0000232;gene_name=CD99P1;ID=intron:HG00140_ch_T0000232:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2298679	2298747	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000232;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000232;transcript_name=HG00140_ch_T0000232;gene_name=CD99P1;ID=exon:HG00140_ch_T0000232:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298748	2301943	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000232;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000232;transcript_name=HG00140_ch_T0000232;gene_name=CD99P1;ID=intron:HG00140_ch_T0000232:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2301944	2301988	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000232;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000232;transcript_name=HG00140_ch_T0000232;gene_name=CD99P1;ID=exon:HG00140_ch_T0000232:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2301989	2302638	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000232;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000232;transcript_name=HG00140_ch_T0000232;gene_name=CD99P1;ID=intron:HG00140_ch_T0000232:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2302639	2302707	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000232;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000232;transcript_name=HG00140_ch_T0000232;gene_name=CD99P1;ID=exon:HG00140_ch_T0000232:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2302708	2305854	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000232;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000232;transcript_name=HG00140_ch_T0000232;gene_name=CD99P1;ID=intron:HG00140_ch_T0000232:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2305855	2305900	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000232;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000232;transcript_name=HG00140_ch_T0000232;gene_name=CD99P1;ID=exon:HG00140_ch_T0000232:8;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2305901	2337967	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000232;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000232;transcript_name=HG00140_ch_T0000232;gene_name=CD99P1;ID=intron:HG00140_ch_T0000232:8;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2337968	2338433	.	+	.	source_transcript=ENST00000850755.1;source_transcript_name=CD99P1-267;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850755.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850755.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000232;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000232;transcript_name=HG00140_ch_T0000232;gene_name=CD99P1;ID=exon:HG00140_ch_T0000232:9;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2288635	2338434	1000	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000233;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000233;gene_name=CD99P1;ID=HG00140_ch_T0000233;Name=CD99P1
HG00140_chrY	CAT	exon	2288635	2288723	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000233;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000233;transcript_name=HG00140_ch_T0000233;gene_name=CD99P1;ID=exon:HG00140_ch_T0000233:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2288724	2290250	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000233;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000233;transcript_name=HG00140_ch_T0000233;gene_name=CD99P1;ID=intron:HG00140_ch_T0000233:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2290251	2290293	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000233;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000233;transcript_name=HG00140_ch_T0000233;gene_name=CD99P1;ID=exon:HG00140_ch_T0000233:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2290294	2291406	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000233;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000233;transcript_name=HG00140_ch_T0000233;gene_name=CD99P1;ID=intron:HG00140_ch_T0000233:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2291407	2291475	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000233;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000233;transcript_name=HG00140_ch_T0000233;gene_name=CD99P1;ID=exon:HG00140_ch_T0000233:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2291476	2295071	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000233;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000233;transcript_name=HG00140_ch_T0000233;gene_name=CD99P1;ID=intron:HG00140_ch_T0000233:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2295072	2295225	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000233;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000233;transcript_name=HG00140_ch_T0000233;gene_name=CD99P1;ID=exon:HG00140_ch_T0000233:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2295226	2297989	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000233;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000233;transcript_name=HG00140_ch_T0000233;gene_name=CD99P1;ID=intron:HG00140_ch_T0000233:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2297990	2298034	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000233;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000233;transcript_name=HG00140_ch_T0000233;gene_name=CD99P1;ID=exon:HG00140_ch_T0000233:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298035	2298678	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000233;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000233;transcript_name=HG00140_ch_T0000233;gene_name=CD99P1;ID=intron:HG00140_ch_T0000233:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2298679	2298747	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000233;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000233;transcript_name=HG00140_ch_T0000233;gene_name=CD99P1;ID=exon:HG00140_ch_T0000233:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298748	2301943	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000233;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000233;transcript_name=HG00140_ch_T0000233;gene_name=CD99P1;ID=intron:HG00140_ch_T0000233:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2301944	2301988	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000233;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000233;transcript_name=HG00140_ch_T0000233;gene_name=CD99P1;ID=exon:HG00140_ch_T0000233:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2301989	2302638	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000233;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000233;transcript_name=HG00140_ch_T0000233;gene_name=CD99P1;ID=intron:HG00140_ch_T0000233:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2302639	2302707	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000233;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000233;transcript_name=HG00140_ch_T0000233;gene_name=CD99P1;ID=exon:HG00140_ch_T0000233:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2302708	2305854	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000233;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000233;transcript_name=HG00140_ch_T0000233;gene_name=CD99P1;ID=intron:HG00140_ch_T0000233:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2305855	2305900	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000233;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000233;transcript_name=HG00140_ch_T0000233;gene_name=CD99P1;ID=exon:HG00140_ch_T0000233:8;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2305901	2337986	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000233;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000233;transcript_name=HG00140_ch_T0000233;gene_name=CD99P1;ID=intron:HG00140_ch_T0000233:8;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2337987	2338434	.	+	.	source_transcript=ENST00000850753.1;source_transcript_name=CD99P1-265;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850753.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850753.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000233;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000233;transcript_name=HG00140_ch_T0000233;gene_name=CD99P1;ID=exon:HG00140_ch_T0000233:9;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2288635	2338465	1000	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000234;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000234;gene_name=CD99P1;ID=HG00140_ch_T0000234;Name=CD99P1
HG00140_chrY	CAT	exon	2288635	2288723	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000234;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000234;transcript_name=HG00140_ch_T0000234;gene_name=CD99P1;ID=exon:HG00140_ch_T0000234:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2288724	2290250	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000234;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000234;transcript_name=HG00140_ch_T0000234;gene_name=CD99P1;ID=intron:HG00140_ch_T0000234:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2290251	2290293	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000234;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000234;transcript_name=HG00140_ch_T0000234;gene_name=CD99P1;ID=exon:HG00140_ch_T0000234:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2290294	2291406	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000234;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000234;transcript_name=HG00140_ch_T0000234;gene_name=CD99P1;ID=intron:HG00140_ch_T0000234:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2291407	2291475	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000234;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000234;transcript_name=HG00140_ch_T0000234;gene_name=CD99P1;ID=exon:HG00140_ch_T0000234:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2291476	2297989	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000234;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000234;transcript_name=HG00140_ch_T0000234;gene_name=CD99P1;ID=intron:HG00140_ch_T0000234:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2297990	2298034	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000234;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000234;transcript_name=HG00140_ch_T0000234;gene_name=CD99P1;ID=exon:HG00140_ch_T0000234:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298035	2298678	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000234;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000234;transcript_name=HG00140_ch_T0000234;gene_name=CD99P1;ID=intron:HG00140_ch_T0000234:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2298679	2298747	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000234;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000234;transcript_name=HG00140_ch_T0000234;gene_name=CD99P1;ID=exon:HG00140_ch_T0000234:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298748	2301943	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000234;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000234;transcript_name=HG00140_ch_T0000234;gene_name=CD99P1;ID=intron:HG00140_ch_T0000234:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2301944	2301988	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000234;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000234;transcript_name=HG00140_ch_T0000234;gene_name=CD99P1;ID=exon:HG00140_ch_T0000234:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2301989	2302638	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000234;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000234;transcript_name=HG00140_ch_T0000234;gene_name=CD99P1;ID=intron:HG00140_ch_T0000234:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2302639	2302707	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000234;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000234;transcript_name=HG00140_ch_T0000234;gene_name=CD99P1;ID=exon:HG00140_ch_T0000234:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2302708	2305854	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000234;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000234;transcript_name=HG00140_ch_T0000234;gene_name=CD99P1;ID=intron:HG00140_ch_T0000234:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2305855	2305900	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000234;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000234;transcript_name=HG00140_ch_T0000234;gene_name=CD99P1;ID=exon:HG00140_ch_T0000234:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2305901	2338026	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000234;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000234;transcript_name=HG00140_ch_T0000234;gene_name=CD99P1;ID=intron:HG00140_ch_T0000234:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2338027	2338465	.	+	.	source_transcript=ENST00000850836.1;source_transcript_name=CD99P1-311;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000234;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000234;transcript_name=HG00140_ch_T0000234;gene_name=CD99P1;ID=exon:HG00140_ch_T0000234:8;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2288635	2338466	1000	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000235;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000235;gene_name=CD99P1;ID=HG00140_ch_T0000235;Name=CD99P1
HG00140_chrY	CAT	exon	2288635	2288723	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000235;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000235;transcript_name=HG00140_ch_T0000235;gene_name=CD99P1;ID=exon:HG00140_ch_T0000235:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2288724	2290250	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000235;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000235;transcript_name=HG00140_ch_T0000235;gene_name=CD99P1;ID=intron:HG00140_ch_T0000235:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2290251	2290293	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000235;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000235;transcript_name=HG00140_ch_T0000235;gene_name=CD99P1;ID=exon:HG00140_ch_T0000235:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2290294	2291406	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000235;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000235;transcript_name=HG00140_ch_T0000235;gene_name=CD99P1;ID=intron:HG00140_ch_T0000235:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2291407	2291475	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000235;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000235;transcript_name=HG00140_ch_T0000235;gene_name=CD99P1;ID=exon:HG00140_ch_T0000235:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2291476	2295071	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000235;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000235;transcript_name=HG00140_ch_T0000235;gene_name=CD99P1;ID=intron:HG00140_ch_T0000235:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2295072	2295225	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000235;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000235;transcript_name=HG00140_ch_T0000235;gene_name=CD99P1;ID=exon:HG00140_ch_T0000235:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2295226	2297989	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000235;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000235;transcript_name=HG00140_ch_T0000235;gene_name=CD99P1;ID=intron:HG00140_ch_T0000235:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2297990	2298034	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000235;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000235;transcript_name=HG00140_ch_T0000235;gene_name=CD99P1;ID=exon:HG00140_ch_T0000235:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298035	2298678	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000235;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000235;transcript_name=HG00140_ch_T0000235;gene_name=CD99P1;ID=intron:HG00140_ch_T0000235:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2298679	2298747	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000235;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000235;transcript_name=HG00140_ch_T0000235;gene_name=CD99P1;ID=exon:HG00140_ch_T0000235:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298748	2301943	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000235;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000235;transcript_name=HG00140_ch_T0000235;gene_name=CD99P1;ID=intron:HG00140_ch_T0000235:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2301944	2301988	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000235;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000235;transcript_name=HG00140_ch_T0000235;gene_name=CD99P1;ID=exon:HG00140_ch_T0000235:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2301989	2302638	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000235;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000235;transcript_name=HG00140_ch_T0000235;gene_name=CD99P1;ID=intron:HG00140_ch_T0000235:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2302639	2302707	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000235;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000235;transcript_name=HG00140_ch_T0000235;gene_name=CD99P1;ID=exon:HG00140_ch_T0000235:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2302708	2305854	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000235;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000235;transcript_name=HG00140_ch_T0000235;gene_name=CD99P1;ID=intron:HG00140_ch_T0000235:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2305855	2305900	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000235;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000235;transcript_name=HG00140_ch_T0000235;gene_name=CD99P1;ID=exon:HG00140_ch_T0000235:8;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2305901	2338026	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000235;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000235;transcript_name=HG00140_ch_T0000235;gene_name=CD99P1;ID=intron:HG00140_ch_T0000235:8;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2338027	2338466	.	+	.	source_transcript=ENST00000850843.1;source_transcript_name=CD99P1-312;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000235;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000235;transcript_name=HG00140_ch_T0000235;gene_name=CD99P1;ID=exon:HG00140_ch_T0000235:9;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2288635	2327692	1000	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000236;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000236;gene_name=CD99P1;ID=HG00140_ch_T0000236;Name=CD99P1
HG00140_chrY	CAT	exon	2288635	2288723	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000236;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000236;transcript_name=HG00140_ch_T0000236;gene_name=CD99P1;ID=exon:HG00140_ch_T0000236:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2288724	2290250	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000236;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000236;transcript_name=HG00140_ch_T0000236;gene_name=CD99P1;ID=intron:HG00140_ch_T0000236:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2290251	2290293	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000236;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000236;transcript_name=HG00140_ch_T0000236;gene_name=CD99P1;ID=exon:HG00140_ch_T0000236:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2290294	2291406	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000236;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000236;transcript_name=HG00140_ch_T0000236;gene_name=CD99P1;ID=intron:HG00140_ch_T0000236:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2291407	2291475	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000236;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000236;transcript_name=HG00140_ch_T0000236;gene_name=CD99P1;ID=exon:HG00140_ch_T0000236:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2291476	2295071	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000236;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000236;transcript_name=HG00140_ch_T0000236;gene_name=CD99P1;ID=intron:HG00140_ch_T0000236:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2295072	2295225	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000236;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000236;transcript_name=HG00140_ch_T0000236;gene_name=CD99P1;ID=exon:HG00140_ch_T0000236:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2295226	2297989	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000236;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000236;transcript_name=HG00140_ch_T0000236;gene_name=CD99P1;ID=intron:HG00140_ch_T0000236:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2297990	2298034	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000236;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000236;transcript_name=HG00140_ch_T0000236;gene_name=CD99P1;ID=exon:HG00140_ch_T0000236:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298035	2298678	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000236;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000236;transcript_name=HG00140_ch_T0000236;gene_name=CD99P1;ID=intron:HG00140_ch_T0000236:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2298679	2298747	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000236;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000236;transcript_name=HG00140_ch_T0000236;gene_name=CD99P1;ID=exon:HG00140_ch_T0000236:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298748	2302638	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000236;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000236;transcript_name=HG00140_ch_T0000236;gene_name=CD99P1;ID=intron:HG00140_ch_T0000236:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2302639	2302707	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000236;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000236;transcript_name=HG00140_ch_T0000236;gene_name=CD99P1;ID=exon:HG00140_ch_T0000236:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2302708	2305854	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000236;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000236;transcript_name=HG00140_ch_T0000236;gene_name=CD99P1;ID=intron:HG00140_ch_T0000236:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2305855	2305900	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000236;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000236;transcript_name=HG00140_ch_T0000236;gene_name=CD99P1;ID=exon:HG00140_ch_T0000236:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2305901	2327046	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000236;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000236;transcript_name=HG00140_ch_T0000236;gene_name=CD99P1;ID=intron:HG00140_ch_T0000236:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2327047	2327692	.	+	.	source_transcript=ENST00000850758.1;source_transcript_name=CD99P1-270;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850758.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850758.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000236;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000236;transcript_name=HG00140_ch_T0000236;gene_name=CD99P1;ID=exon:HG00140_ch_T0000236:8;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2288635	2345933	1000	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000237;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000237;gene_name=CD99P1;ID=HG00140_ch_T0000237;Name=CD99P1
HG00140_chrY	CAT	exon	2288635	2288723	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000237;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000237;transcript_name=HG00140_ch_T0000237;gene_name=CD99P1;ID=exon:HG00140_ch_T0000237:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2288724	2290250	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000237;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000237;transcript_name=HG00140_ch_T0000237;gene_name=CD99P1;ID=intron:HG00140_ch_T0000237:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2290251	2290293	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000237;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000237;transcript_name=HG00140_ch_T0000237;gene_name=CD99P1;ID=exon:HG00140_ch_T0000237:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2290294	2291406	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000237;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000237;transcript_name=HG00140_ch_T0000237;gene_name=CD99P1;ID=intron:HG00140_ch_T0000237:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2291407	2291475	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000237;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000237;transcript_name=HG00140_ch_T0000237;gene_name=CD99P1;ID=exon:HG00140_ch_T0000237:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2291476	2295071	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000237;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000237;transcript_name=HG00140_ch_T0000237;gene_name=CD99P1;ID=intron:HG00140_ch_T0000237:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2295072	2295225	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000237;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000237;transcript_name=HG00140_ch_T0000237;gene_name=CD99P1;ID=exon:HG00140_ch_T0000237:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2295226	2297989	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000237;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000237;transcript_name=HG00140_ch_T0000237;gene_name=CD99P1;ID=intron:HG00140_ch_T0000237:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2297990	2298034	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000237;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000237;transcript_name=HG00140_ch_T0000237;gene_name=CD99P1;ID=exon:HG00140_ch_T0000237:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298035	2298678	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000237;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000237;transcript_name=HG00140_ch_T0000237;gene_name=CD99P1;ID=intron:HG00140_ch_T0000237:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2298679	2298747	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000237;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000237;transcript_name=HG00140_ch_T0000237;gene_name=CD99P1;ID=exon:HG00140_ch_T0000237:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298748	2302638	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000237;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000237;transcript_name=HG00140_ch_T0000237;gene_name=CD99P1;ID=intron:HG00140_ch_T0000237:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2302639	2302707	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000237;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000237;transcript_name=HG00140_ch_T0000237;gene_name=CD99P1;ID=exon:HG00140_ch_T0000237:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2302708	2305854	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000237;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000237;transcript_name=HG00140_ch_T0000237;gene_name=CD99P1;ID=intron:HG00140_ch_T0000237:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2305855	2305900	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000237;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000237;transcript_name=HG00140_ch_T0000237;gene_name=CD99P1;ID=exon:HG00140_ch_T0000237:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2305901	2345412	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000237;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000237;transcript_name=HG00140_ch_T0000237;gene_name=CD99P1;ID=intron:HG00140_ch_T0000237:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2345413	2345933	.	+	.	source_transcript=ENST00000850751.1;source_transcript_name=CD99P1-263;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000237;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000237;transcript_name=HG00140_ch_T0000237;gene_name=CD99P1;ID=exon:HG00140_ch_T0000237:8;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2288635	2306568	1000	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000238;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000238;gene_name=CD99P1;ID=HG00140_ch_T0000238;Name=CD99P1
HG00140_chrY	CAT	exon	2288635	2288723	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000238;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000238;transcript_name=HG00140_ch_T0000238;gene_name=CD99P1;ID=exon:HG00140_ch_T0000238:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2288724	2290250	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000238;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000238;transcript_name=HG00140_ch_T0000238;gene_name=CD99P1;ID=intron:HG00140_ch_T0000238:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2290251	2290293	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000238;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000238;transcript_name=HG00140_ch_T0000238;gene_name=CD99P1;ID=exon:HG00140_ch_T0000238:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2290294	2291406	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000238;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000238;transcript_name=HG00140_ch_T0000238;gene_name=CD99P1;ID=intron:HG00140_ch_T0000238:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2291407	2291475	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000238;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000238;transcript_name=HG00140_ch_T0000238;gene_name=CD99P1;ID=exon:HG00140_ch_T0000238:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2291476	2295071	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000238;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000238;transcript_name=HG00140_ch_T0000238;gene_name=CD99P1;ID=intron:HG00140_ch_T0000238:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2295072	2295225	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000238;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000238;transcript_name=HG00140_ch_T0000238;gene_name=CD99P1;ID=exon:HG00140_ch_T0000238:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2295226	2297989	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000238;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000238;transcript_name=HG00140_ch_T0000238;gene_name=CD99P1;ID=intron:HG00140_ch_T0000238:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2297990	2298034	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000238;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000238;transcript_name=HG00140_ch_T0000238;gene_name=CD99P1;ID=exon:HG00140_ch_T0000238:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298035	2298678	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000238;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000238;transcript_name=HG00140_ch_T0000238;gene_name=CD99P1;ID=intron:HG00140_ch_T0000238:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2298679	2298747	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000238;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000238;transcript_name=HG00140_ch_T0000238;gene_name=CD99P1;ID=exon:HG00140_ch_T0000238:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298748	2302638	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000238;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000238;transcript_name=HG00140_ch_T0000238;gene_name=CD99P1;ID=intron:HG00140_ch_T0000238:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2302639	2302707	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000238;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000238;transcript_name=HG00140_ch_T0000238;gene_name=CD99P1;ID=exon:HG00140_ch_T0000238:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2302708	2305854	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000238;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000238;transcript_name=HG00140_ch_T0000238;gene_name=CD99P1;ID=intron:HG00140_ch_T0000238:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2305855	2306568	.	+	.	source_transcript=ENST00000850790.1;source_transcript_name=CD99P1-302;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000238;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000238;transcript_name=HG00140_ch_T0000238;gene_name=CD99P1;ID=exon:HG00140_ch_T0000238:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2288635	2338434	1000	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000239;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000239;gene_name=CD99P1;ID=HG00140_ch_T0000239;Name=CD99P1
HG00140_chrY	CAT	exon	2288635	2288723	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000239;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000239;transcript_name=HG00140_ch_T0000239;gene_name=CD99P1;ID=exon:HG00140_ch_T0000239:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2288724	2290250	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000239;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000239;transcript_name=HG00140_ch_T0000239;gene_name=CD99P1;ID=intron:HG00140_ch_T0000239:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2290251	2290293	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000239;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000239;transcript_name=HG00140_ch_T0000239;gene_name=CD99P1;ID=exon:HG00140_ch_T0000239:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2290294	2291406	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000239;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000239;transcript_name=HG00140_ch_T0000239;gene_name=CD99P1;ID=intron:HG00140_ch_T0000239:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2291407	2291475	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000239;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000239;transcript_name=HG00140_ch_T0000239;gene_name=CD99P1;ID=exon:HG00140_ch_T0000239:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2291476	2295071	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000239;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000239;transcript_name=HG00140_ch_T0000239;gene_name=CD99P1;ID=intron:HG00140_ch_T0000239:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2295072	2295225	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000239;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000239;transcript_name=HG00140_ch_T0000239;gene_name=CD99P1;ID=exon:HG00140_ch_T0000239:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2295226	2297989	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000239;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000239;transcript_name=HG00140_ch_T0000239;gene_name=CD99P1;ID=intron:HG00140_ch_T0000239:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2297990	2298034	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000239;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000239;transcript_name=HG00140_ch_T0000239;gene_name=CD99P1;ID=exon:HG00140_ch_T0000239:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298035	2298678	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000239;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000239;transcript_name=HG00140_ch_T0000239;gene_name=CD99P1;ID=intron:HG00140_ch_T0000239:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2298679	2298747	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000239;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000239;transcript_name=HG00140_ch_T0000239;gene_name=CD99P1;ID=exon:HG00140_ch_T0000239:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298748	2302638	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000239;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000239;transcript_name=HG00140_ch_T0000239;gene_name=CD99P1;ID=intron:HG00140_ch_T0000239:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2302639	2302707	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000239;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000239;transcript_name=HG00140_ch_T0000239;gene_name=CD99P1;ID=exon:HG00140_ch_T0000239:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2302708	2305854	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000239;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000239;transcript_name=HG00140_ch_T0000239;gene_name=CD99P1;ID=intron:HG00140_ch_T0000239:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2305855	2305900	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000239;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000239;transcript_name=HG00140_ch_T0000239;gene_name=CD99P1;ID=exon:HG00140_ch_T0000239:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2305901	2337967	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000239;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000239;transcript_name=HG00140_ch_T0000239;gene_name=CD99P1;ID=intron:HG00140_ch_T0000239:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2337968	2338434	.	+	.	source_transcript=ENST00000850754.1;source_transcript_name=CD99P1-266;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850754.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850754.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000239;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000239;transcript_name=HG00140_ch_T0000239;gene_name=CD99P1;ID=exon:HG00140_ch_T0000239:8;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2288635	2298303	1000	+	.	source_transcript=ENST00000850794.1;source_transcript_name=CD99P1-306;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850794.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000240;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000240;gene_name=CD99P1;ID=HG00140_ch_T0000240;Name=CD99P1
HG00140_chrY	CAT	exon	2288635	2288723	.	+	.	source_transcript=ENST00000850794.1;source_transcript_name=CD99P1-306;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000240;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000240;transcript_name=HG00140_ch_T0000240;gene_name=CD99P1;ID=exon:HG00140_ch_T0000240:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2288724	2295071	.	+	.	source_transcript=ENST00000850794.1;source_transcript_name=CD99P1-306;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000240;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000240;transcript_name=HG00140_ch_T0000240;gene_name=CD99P1;ID=intron:HG00140_ch_T0000240:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2295072	2295225	.	+	.	source_transcript=ENST00000850794.1;source_transcript_name=CD99P1-306;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000240;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000240;transcript_name=HG00140_ch_T0000240;gene_name=CD99P1;ID=exon:HG00140_ch_T0000240:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2295226	2297989	.	+	.	source_transcript=ENST00000850794.1;source_transcript_name=CD99P1-306;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000240;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000240;transcript_name=HG00140_ch_T0000240;gene_name=CD99P1;ID=intron:HG00140_ch_T0000240:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2297990	2298303	.	+	.	source_transcript=ENST00000850794.1;source_transcript_name=CD99P1-306;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000240;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000240;transcript_name=HG00140_ch_T0000240;gene_name=CD99P1;ID=exon:HG00140_ch_T0000240:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2288640	2337555	1000	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000241;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000241;gene_name=CD99P1;ID=HG00140_ch_T0000241;Name=CD99P1
HG00140_chrY	CAT	exon	2288640	2288723	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000241;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000241;transcript_name=HG00140_ch_T0000241;gene_name=CD99P1;ID=exon:HG00140_ch_T0000241:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2288724	2290250	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000241;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000241;transcript_name=HG00140_ch_T0000241;gene_name=CD99P1;ID=intron:HG00140_ch_T0000241:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2290251	2290293	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000241;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000241;transcript_name=HG00140_ch_T0000241;gene_name=CD99P1;ID=exon:HG00140_ch_T0000241:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2290294	2291406	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000241;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000241;transcript_name=HG00140_ch_T0000241;gene_name=CD99P1;ID=intron:HG00140_ch_T0000241:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2291407	2291475	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000241;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000241;transcript_name=HG00140_ch_T0000241;gene_name=CD99P1;ID=exon:HG00140_ch_T0000241:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2291476	2295071	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000241;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000241;transcript_name=HG00140_ch_T0000241;gene_name=CD99P1;ID=intron:HG00140_ch_T0000241:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2295072	2295225	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000241;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000241;transcript_name=HG00140_ch_T0000241;gene_name=CD99P1;ID=exon:HG00140_ch_T0000241:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2295226	2297989	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000241;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000241;transcript_name=HG00140_ch_T0000241;gene_name=CD99P1;ID=intron:HG00140_ch_T0000241:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2297990	2298034	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000241;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000241;transcript_name=HG00140_ch_T0000241;gene_name=CD99P1;ID=exon:HG00140_ch_T0000241:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298035	2298678	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000241;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000241;transcript_name=HG00140_ch_T0000241;gene_name=CD99P1;ID=intron:HG00140_ch_T0000241:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2298679	2298747	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000241;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000241;transcript_name=HG00140_ch_T0000241;gene_name=CD99P1;ID=exon:HG00140_ch_T0000241:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298748	2301943	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000241;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000241;transcript_name=HG00140_ch_T0000241;gene_name=CD99P1;ID=intron:HG00140_ch_T0000241:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2301944	2301988	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000241;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000241;transcript_name=HG00140_ch_T0000241;gene_name=CD99P1;ID=exon:HG00140_ch_T0000241:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2301989	2302638	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000241;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000241;transcript_name=HG00140_ch_T0000241;gene_name=CD99P1;ID=intron:HG00140_ch_T0000241:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2302639	2302707	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000241;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000241;transcript_name=HG00140_ch_T0000241;gene_name=CD99P1;ID=exon:HG00140_ch_T0000241:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2302708	2305854	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000241;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000241;transcript_name=HG00140_ch_T0000241;gene_name=CD99P1;ID=intron:HG00140_ch_T0000241:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2305855	2305900	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000241;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000241;transcript_name=HG00140_ch_T0000241;gene_name=CD99P1;ID=exon:HG00140_ch_T0000241:8;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2305901	2337404	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000241;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000241;transcript_name=HG00140_ch_T0000241;gene_name=CD99P1;ID=intron:HG00140_ch_T0000241:8;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2337405	2337555	.	+	.	source_transcript=ENST00000850756.1;source_transcript_name=CD99P1-268;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000241;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000241;transcript_name=HG00140_ch_T0000241;gene_name=CD99P1;ID=exon:HG00140_ch_T0000241:9;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2288643	2317869	1000	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000242;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000242;gene_name=CD99P1;ID=HG00140_ch_T0000242;Name=CD99P1
HG00140_chrY	CAT	exon	2288643	2288723	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000242;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000242;transcript_name=HG00140_ch_T0000242;gene_name=CD99P1;ID=exon:HG00140_ch_T0000242:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2288724	2290250	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000242;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000242;transcript_name=HG00140_ch_T0000242;gene_name=CD99P1;ID=intron:HG00140_ch_T0000242:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2290251	2290293	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000242;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000242;transcript_name=HG00140_ch_T0000242;gene_name=CD99P1;ID=exon:HG00140_ch_T0000242:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2290294	2291406	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000242;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000242;transcript_name=HG00140_ch_T0000242;gene_name=CD99P1;ID=intron:HG00140_ch_T0000242:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2291407	2291475	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000242;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000242;transcript_name=HG00140_ch_T0000242;gene_name=CD99P1;ID=exon:HG00140_ch_T0000242:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2291476	2295071	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000242;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000242;transcript_name=HG00140_ch_T0000242;gene_name=CD99P1;ID=intron:HG00140_ch_T0000242:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2295072	2295225	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000242;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000242;transcript_name=HG00140_ch_T0000242;gene_name=CD99P1;ID=exon:HG00140_ch_T0000242:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2295226	2297989	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000242;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000242;transcript_name=HG00140_ch_T0000242;gene_name=CD99P1;ID=intron:HG00140_ch_T0000242:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2297990	2298034	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000242;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000242;transcript_name=HG00140_ch_T0000242;gene_name=CD99P1;ID=exon:HG00140_ch_T0000242:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298035	2298678	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000242;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000242;transcript_name=HG00140_ch_T0000242;gene_name=CD99P1;ID=intron:HG00140_ch_T0000242:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2298679	2298747	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000242;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000242;transcript_name=HG00140_ch_T0000242;gene_name=CD99P1;ID=exon:HG00140_ch_T0000242:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298748	2302602	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000242;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000242;transcript_name=HG00140_ch_T0000242;gene_name=CD99P1;ID=intron:HG00140_ch_T0000242:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2302603	2302707	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000242;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000242;transcript_name=HG00140_ch_T0000242;gene_name=CD99P1;ID=exon:HG00140_ch_T0000242:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2302708	2305854	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000242;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000242;transcript_name=HG00140_ch_T0000242;gene_name=CD99P1;ID=intron:HG00140_ch_T0000242:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2305855	2305900	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000242;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000242;transcript_name=HG00140_ch_T0000242;gene_name=CD99P1;ID=exon:HG00140_ch_T0000242:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2305901	2317511	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000242;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000242;transcript_name=HG00140_ch_T0000242;gene_name=CD99P1;ID=intron:HG00140_ch_T0000242:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2317512	2317869	.	+	.	source_transcript=ENST00000850770.1;source_transcript_name=CD99P1-282;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850770.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000242;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000242;transcript_name=HG00140_ch_T0000242;gene_name=CD99P1;ID=exon:HG00140_ch_T0000242:8;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2288643	2317867	1000	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000243;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000243;gene_name=CD99P1;ID=HG00140_ch_T0000243;Name=CD99P1
HG00140_chrY	CAT	exon	2288643	2288723	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000243;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000243;transcript_name=HG00140_ch_T0000243;gene_name=CD99P1;ID=exon:HG00140_ch_T0000243:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2288724	2290250	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000243;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000243;transcript_name=HG00140_ch_T0000243;gene_name=CD99P1;ID=intron:HG00140_ch_T0000243:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2290251	2290293	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000243;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000243;transcript_name=HG00140_ch_T0000243;gene_name=CD99P1;ID=exon:HG00140_ch_T0000243:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2290294	2297989	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000243;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000243;transcript_name=HG00140_ch_T0000243;gene_name=CD99P1;ID=intron:HG00140_ch_T0000243:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2297990	2298034	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000243;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000243;transcript_name=HG00140_ch_T0000243;gene_name=CD99P1;ID=exon:HG00140_ch_T0000243:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298035	2298678	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000243;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000243;transcript_name=HG00140_ch_T0000243;gene_name=CD99P1;ID=intron:HG00140_ch_T0000243:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2298679	2298747	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000243;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000243;transcript_name=HG00140_ch_T0000243;gene_name=CD99P1;ID=exon:HG00140_ch_T0000243:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298748	2302638	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000243;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000243;transcript_name=HG00140_ch_T0000243;gene_name=CD99P1;ID=intron:HG00140_ch_T0000243:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2302639	2302707	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000243;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000243;transcript_name=HG00140_ch_T0000243;gene_name=CD99P1;ID=exon:HG00140_ch_T0000243:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2302708	2305854	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000243;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000243;transcript_name=HG00140_ch_T0000243;gene_name=CD99P1;ID=intron:HG00140_ch_T0000243:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2305855	2305900	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000243;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000243;transcript_name=HG00140_ch_T0000243;gene_name=CD99P1;ID=exon:HG00140_ch_T0000243:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2305901	2317511	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000243;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000243;transcript_name=HG00140_ch_T0000243;gene_name=CD99P1;ID=intron:HG00140_ch_T0000243:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2317512	2317867	.	+	.	source_transcript=ENST00000850771.1;source_transcript_name=CD99P1-283;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850771.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850771.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000243;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000243;transcript_name=HG00140_ch_T0000243;gene_name=CD99P1;ID=exon:HG00140_ch_T0000243:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2288645	2317867	1000	+	.	source_transcript=ENST00000850774.1;source_transcript_name=CD99P1-286;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850774.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000244;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000244;gene_name=CD99P1;ID=HG00140_ch_T0000244;Name=CD99P1
HG00140_chrY	CAT	exon	2288645	2288723	.	+	.	source_transcript=ENST00000850774.1;source_transcript_name=CD99P1-286;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000244;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000244;transcript_name=HG00140_ch_T0000244;gene_name=CD99P1;ID=exon:HG00140_ch_T0000244:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2288724	2290250	.	+	.	source_transcript=ENST00000850774.1;source_transcript_name=CD99P1-286;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000244;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000244;transcript_name=HG00140_ch_T0000244;gene_name=CD99P1;ID=intron:HG00140_ch_T0000244:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2290251	2290293	.	+	.	source_transcript=ENST00000850774.1;source_transcript_name=CD99P1-286;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000244;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000244;transcript_name=HG00140_ch_T0000244;gene_name=CD99P1;ID=exon:HG00140_ch_T0000244:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2290294	2291406	.	+	.	source_transcript=ENST00000850774.1;source_transcript_name=CD99P1-286;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000244;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000244;transcript_name=HG00140_ch_T0000244;gene_name=CD99P1;ID=intron:HG00140_ch_T0000244:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2291407	2291475	.	+	.	source_transcript=ENST00000850774.1;source_transcript_name=CD99P1-286;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000244;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000244;transcript_name=HG00140_ch_T0000244;gene_name=CD99P1;ID=exon:HG00140_ch_T0000244:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2291476	2305854	.	+	.	source_transcript=ENST00000850774.1;source_transcript_name=CD99P1-286;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000244;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000244;transcript_name=HG00140_ch_T0000244;gene_name=CD99P1;ID=intron:HG00140_ch_T0000244:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2305855	2305900	.	+	.	source_transcript=ENST00000850774.1;source_transcript_name=CD99P1-286;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000244;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000244;transcript_name=HG00140_ch_T0000244;gene_name=CD99P1;ID=exon:HG00140_ch_T0000244:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2305901	2317511	.	+	.	source_transcript=ENST00000850774.1;source_transcript_name=CD99P1-286;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000244;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000244;transcript_name=HG00140_ch_T0000244;gene_name=CD99P1;ID=intron:HG00140_ch_T0000244:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2317512	2317867	.	+	.	source_transcript=ENST00000850774.1;source_transcript_name=CD99P1-286;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850774.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000244;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000244;transcript_name=HG00140_ch_T0000244;gene_name=CD99P1;ID=exon:HG00140_ch_T0000244:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2288645	2317867	1000	+	.	source_transcript=ENST00000850773.1;source_transcript_name=CD99P1-285;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850773.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000245;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000245;gene_name=CD99P1;ID=HG00140_ch_T0000245;Name=CD99P1
HG00140_chrY	CAT	exon	2288645	2288723	.	+	.	source_transcript=ENST00000850773.1;source_transcript_name=CD99P1-285;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850773.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000245;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000245;transcript_name=HG00140_ch_T0000245;gene_name=CD99P1;ID=exon:HG00140_ch_T0000245:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2288724	2290250	.	+	.	source_transcript=ENST00000850773.1;source_transcript_name=CD99P1-285;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850773.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000245;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000245;transcript_name=HG00140_ch_T0000245;gene_name=CD99P1;ID=intron:HG00140_ch_T0000245:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2290251	2290293	.	+	.	source_transcript=ENST00000850773.1;source_transcript_name=CD99P1-285;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850773.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000245;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000245;transcript_name=HG00140_ch_T0000245;gene_name=CD99P1;ID=exon:HG00140_ch_T0000245:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2290294	2291406	.	+	.	source_transcript=ENST00000850773.1;source_transcript_name=CD99P1-285;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850773.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000245;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000245;transcript_name=HG00140_ch_T0000245;gene_name=CD99P1;ID=intron:HG00140_ch_T0000245:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2291407	2291475	.	+	.	source_transcript=ENST00000850773.1;source_transcript_name=CD99P1-285;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850773.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000245;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000245;transcript_name=HG00140_ch_T0000245;gene_name=CD99P1;ID=exon:HG00140_ch_T0000245:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2291476	2295071	.	+	.	source_transcript=ENST00000850773.1;source_transcript_name=CD99P1-285;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850773.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000245;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000245;transcript_name=HG00140_ch_T0000245;gene_name=CD99P1;ID=intron:HG00140_ch_T0000245:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2295072	2295225	.	+	.	source_transcript=ENST00000850773.1;source_transcript_name=CD99P1-285;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850773.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000245;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000245;transcript_name=HG00140_ch_T0000245;gene_name=CD99P1;ID=exon:HG00140_ch_T0000245:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2295226	2317511	.	+	.	source_transcript=ENST00000850773.1;source_transcript_name=CD99P1-285;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850773.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000245;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000245;transcript_name=HG00140_ch_T0000245;gene_name=CD99P1;ID=intron:HG00140_ch_T0000245:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2317512	2317867	.	+	.	source_transcript=ENST00000850773.1;source_transcript_name=CD99P1-285;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850773.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000245;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000245;transcript_name=HG00140_ch_T0000245;gene_name=CD99P1;ID=exon:HG00140_ch_T0000245:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2288645	2317867	1000	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000246;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000246;gene_name=CD99P1;ID=HG00140_ch_T0000246;Name=CD99P1
HG00140_chrY	CAT	exon	2288645	2288723	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000246;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000246;transcript_name=HG00140_ch_T0000246;gene_name=CD99P1;ID=exon:HG00140_ch_T0000246:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2288724	2290250	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000246;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000246;transcript_name=HG00140_ch_T0000246;gene_name=CD99P1;ID=intron:HG00140_ch_T0000246:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2290251	2290293	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000246;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000246;transcript_name=HG00140_ch_T0000246;gene_name=CD99P1;ID=exon:HG00140_ch_T0000246:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2290294	2291406	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000246;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000246;transcript_name=HG00140_ch_T0000246;gene_name=CD99P1;ID=intron:HG00140_ch_T0000246:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2291407	2291475	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000246;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000246;transcript_name=HG00140_ch_T0000246;gene_name=CD99P1;ID=exon:HG00140_ch_T0000246:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2291476	2297989	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000246;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000246;transcript_name=HG00140_ch_T0000246;gene_name=CD99P1;ID=intron:HG00140_ch_T0000246:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2297990	2298034	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000246;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000246;transcript_name=HG00140_ch_T0000246;gene_name=CD99P1;ID=exon:HG00140_ch_T0000246:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298035	2298678	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000246;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000246;transcript_name=HG00140_ch_T0000246;gene_name=CD99P1;ID=intron:HG00140_ch_T0000246:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2298679	2298747	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000246;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000246;transcript_name=HG00140_ch_T0000246;gene_name=CD99P1;ID=exon:HG00140_ch_T0000246:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298748	2302602	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000246;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000246;transcript_name=HG00140_ch_T0000246;gene_name=CD99P1;ID=intron:HG00140_ch_T0000246:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2302603	2302707	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000246;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000246;transcript_name=HG00140_ch_T0000246;gene_name=CD99P1;ID=exon:HG00140_ch_T0000246:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2302708	2305854	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000246;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000246;transcript_name=HG00140_ch_T0000246;gene_name=CD99P1;ID=intron:HG00140_ch_T0000246:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2305855	2305900	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000246;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000246;transcript_name=HG00140_ch_T0000246;gene_name=CD99P1;ID=exon:HG00140_ch_T0000246:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2305901	2317511	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000246;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000246;transcript_name=HG00140_ch_T0000246;gene_name=CD99P1;ID=intron:HG00140_ch_T0000246:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2317512	2317867	.	+	.	source_transcript=ENST00000850772.1;source_transcript_name=CD99P1-284;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850772.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850772.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000246;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000246;transcript_name=HG00140_ch_T0000246;gene_name=CD99P1;ID=exon:HG00140_ch_T0000246:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2288646	2336753	1000	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000247;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000247;gene_name=CD99P1;ID=HG00140_ch_T0000247;Name=CD99P1
HG00140_chrY	CAT	exon	2288646	2288723	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000247;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000247;transcript_name=HG00140_ch_T0000247;gene_name=CD99P1;ID=exon:HG00140_ch_T0000247:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2288724	2290250	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000247;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000247;transcript_name=HG00140_ch_T0000247;gene_name=CD99P1;ID=intron:HG00140_ch_T0000247:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2290251	2290293	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000247;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000247;transcript_name=HG00140_ch_T0000247;gene_name=CD99P1;ID=exon:HG00140_ch_T0000247:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2290294	2291406	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000247;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000247;transcript_name=HG00140_ch_T0000247;gene_name=CD99P1;ID=intron:HG00140_ch_T0000247:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2291407	2291475	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000247;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000247;transcript_name=HG00140_ch_T0000247;gene_name=CD99P1;ID=exon:HG00140_ch_T0000247:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2291476	2295071	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000247;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000247;transcript_name=HG00140_ch_T0000247;gene_name=CD99P1;ID=intron:HG00140_ch_T0000247:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2295072	2295225	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000247;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000247;transcript_name=HG00140_ch_T0000247;gene_name=CD99P1;ID=exon:HG00140_ch_T0000247:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2295226	2297989	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000247;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000247;transcript_name=HG00140_ch_T0000247;gene_name=CD99P1;ID=intron:HG00140_ch_T0000247:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2297990	2298034	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000247;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000247;transcript_name=HG00140_ch_T0000247;gene_name=CD99P1;ID=exon:HG00140_ch_T0000247:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298035	2298678	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000247;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000247;transcript_name=HG00140_ch_T0000247;gene_name=CD99P1;ID=intron:HG00140_ch_T0000247:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2298679	2298747	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000247;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000247;transcript_name=HG00140_ch_T0000247;gene_name=CD99P1;ID=exon:HG00140_ch_T0000247:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298748	2302638	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000247;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000247;transcript_name=HG00140_ch_T0000247;gene_name=CD99P1;ID=intron:HG00140_ch_T0000247:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2302639	2302707	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000247;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000247;transcript_name=HG00140_ch_T0000247;gene_name=CD99P1;ID=exon:HG00140_ch_T0000247:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2302708	2305854	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000247;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000247;transcript_name=HG00140_ch_T0000247;gene_name=CD99P1;ID=intron:HG00140_ch_T0000247:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2305855	2305900	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000247;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000247;transcript_name=HG00140_ch_T0000247;gene_name=CD99P1;ID=exon:HG00140_ch_T0000247:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2305901	2334550	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000247;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000247;transcript_name=HG00140_ch_T0000247;gene_name=CD99P1;ID=intron:HG00140_ch_T0000247:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2334551	2336753	.	+	.	source_transcript=ENST00000711252.1;source_transcript_name=CD99P1-260;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711252.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000247;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000247;transcript_name=HG00140_ch_T0000247;gene_name=CD99P1;ID=exon:HG00140_ch_T0000247:8;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2288647	2317867	1000	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000248;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000248;gene_name=CD99P1;ID=HG00140_ch_T0000248;Name=CD99P1
HG00140_chrY	CAT	exon	2288647	2288723	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000248;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000248;transcript_name=HG00140_ch_T0000248;gene_name=CD99P1;ID=exon:HG00140_ch_T0000248:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2288724	2290250	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000248;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000248;transcript_name=HG00140_ch_T0000248;gene_name=CD99P1;ID=intron:HG00140_ch_T0000248:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2290251	2290293	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000248;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000248;transcript_name=HG00140_ch_T0000248;gene_name=CD99P1;ID=exon:HG00140_ch_T0000248:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2290294	2291406	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000248;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000248;transcript_name=HG00140_ch_T0000248;gene_name=CD99P1;ID=intron:HG00140_ch_T0000248:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2291407	2291475	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000248;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000248;transcript_name=HG00140_ch_T0000248;gene_name=CD99P1;ID=exon:HG00140_ch_T0000248:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2291476	2295071	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000248;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000248;transcript_name=HG00140_ch_T0000248;gene_name=CD99P1;ID=intron:HG00140_ch_T0000248:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2295072	2295225	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000248;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000248;transcript_name=HG00140_ch_T0000248;gene_name=CD99P1;ID=exon:HG00140_ch_T0000248:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2295226	2297782	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000248;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000248;transcript_name=HG00140_ch_T0000248;gene_name=CD99P1;ID=intron:HG00140_ch_T0000248:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2297783	2297866	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000248;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000248;transcript_name=HG00140_ch_T0000248;gene_name=CD99P1;ID=exon:HG00140_ch_T0000248:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2297867	2297989	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000248;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000248;transcript_name=HG00140_ch_T0000248;gene_name=CD99P1;ID=intron:HG00140_ch_T0000248:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2297990	2298034	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000248;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000248;transcript_name=HG00140_ch_T0000248;gene_name=CD99P1;ID=exon:HG00140_ch_T0000248:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298035	2298678	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000248;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000248;transcript_name=HG00140_ch_T0000248;gene_name=CD99P1;ID=intron:HG00140_ch_T0000248:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2298679	2298747	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000248;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000248;transcript_name=HG00140_ch_T0000248;gene_name=CD99P1;ID=exon:HG00140_ch_T0000248:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298748	2302638	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000248;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000248;transcript_name=HG00140_ch_T0000248;gene_name=CD99P1;ID=intron:HG00140_ch_T0000248:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2302639	2302707	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000248;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000248;transcript_name=HG00140_ch_T0000248;gene_name=CD99P1;ID=exon:HG00140_ch_T0000248:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2302708	2305854	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000248;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000248;transcript_name=HG00140_ch_T0000248;gene_name=CD99P1;ID=intron:HG00140_ch_T0000248:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2305855	2305900	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000248;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000248;transcript_name=HG00140_ch_T0000248;gene_name=CD99P1;ID=exon:HG00140_ch_T0000248:8;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2305901	2317511	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000248;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000248;transcript_name=HG00140_ch_T0000248;gene_name=CD99P1;ID=intron:HG00140_ch_T0000248:8;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2317512	2317867	.	+	.	source_transcript=ENST00000850775.1;source_transcript_name=CD99P1-287;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850775.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850775.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000248;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000248;transcript_name=HG00140_ch_T0000248;gene_name=CD99P1;ID=exon:HG00140_ch_T0000248:9;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2288648	2317867	1000	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000249;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000249;gene_name=CD99P1;ID=HG00140_ch_T0000249;Name=CD99P1
HG00140_chrY	CAT	exon	2288648	2288723	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000249;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000249;transcript_name=HG00140_ch_T0000249;gene_name=CD99P1;ID=exon:HG00140_ch_T0000249:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2288724	2290250	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000249;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000249;transcript_name=HG00140_ch_T0000249;gene_name=CD99P1;ID=intron:HG00140_ch_T0000249:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2290251	2290293	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000249;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000249;transcript_name=HG00140_ch_T0000249;gene_name=CD99P1;ID=exon:HG00140_ch_T0000249:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2290294	2291406	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000249;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000249;transcript_name=HG00140_ch_T0000249;gene_name=CD99P1;ID=intron:HG00140_ch_T0000249:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2291407	2291475	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000249;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000249;transcript_name=HG00140_ch_T0000249;gene_name=CD99P1;ID=exon:HG00140_ch_T0000249:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2291476	2302638	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000249;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000249;transcript_name=HG00140_ch_T0000249;gene_name=CD99P1;ID=intron:HG00140_ch_T0000249:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2302639	2302707	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000249;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000249;transcript_name=HG00140_ch_T0000249;gene_name=CD99P1;ID=exon:HG00140_ch_T0000249:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2302708	2305854	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000249;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000249;transcript_name=HG00140_ch_T0000249;gene_name=CD99P1;ID=intron:HG00140_ch_T0000249:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2305855	2305900	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000249;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000249;transcript_name=HG00140_ch_T0000249;gene_name=CD99P1;ID=exon:HG00140_ch_T0000249:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2305901	2317511	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000249;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000249;transcript_name=HG00140_ch_T0000249;gene_name=CD99P1;ID=intron:HG00140_ch_T0000249:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2317512	2317867	.	+	.	source_transcript=ENST00000850776.1;source_transcript_name=CD99P1-288;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850776.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000249;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000249;transcript_name=HG00140_ch_T0000249;gene_name=CD99P1;ID=exon:HG00140_ch_T0000249:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2288648	2317865	1000	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000250;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000250;gene_name=CD99P1;ID=HG00140_ch_T0000250;Name=CD99P1
HG00140_chrY	CAT	exon	2288648	2288723	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000250;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000250;transcript_name=HG00140_ch_T0000250;gene_name=CD99P1;ID=exon:HG00140_ch_T0000250:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2288724	2290250	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000250;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000250;transcript_name=HG00140_ch_T0000250;gene_name=CD99P1;ID=intron:HG00140_ch_T0000250:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2290251	2290293	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000250;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000250;transcript_name=HG00140_ch_T0000250;gene_name=CD99P1;ID=exon:HG00140_ch_T0000250:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2290294	2291406	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000250;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000250;transcript_name=HG00140_ch_T0000250;gene_name=CD99P1;ID=intron:HG00140_ch_T0000250:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2291407	2291475	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000250;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000250;transcript_name=HG00140_ch_T0000250;gene_name=CD99P1;ID=exon:HG00140_ch_T0000250:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2291476	2295071	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000250;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000250;transcript_name=HG00140_ch_T0000250;gene_name=CD99P1;ID=intron:HG00140_ch_T0000250:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2295072	2295225	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000250;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000250;transcript_name=HG00140_ch_T0000250;gene_name=CD99P1;ID=exon:HG00140_ch_T0000250:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2295226	2297782	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000250;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000250;transcript_name=HG00140_ch_T0000250;gene_name=CD99P1;ID=intron:HG00140_ch_T0000250:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2297783	2297866	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000250;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000250;transcript_name=HG00140_ch_T0000250;gene_name=CD99P1;ID=exon:HG00140_ch_T0000250:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2297867	2297989	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000250;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000250;transcript_name=HG00140_ch_T0000250;gene_name=CD99P1;ID=intron:HG00140_ch_T0000250:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2297990	2298034	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000250;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000250;transcript_name=HG00140_ch_T0000250;gene_name=CD99P1;ID=exon:HG00140_ch_T0000250:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298035	2298678	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000250;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000250;transcript_name=HG00140_ch_T0000250;gene_name=CD99P1;ID=intron:HG00140_ch_T0000250:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2298679	2298747	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000250;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000250;transcript_name=HG00140_ch_T0000250;gene_name=CD99P1;ID=exon:HG00140_ch_T0000250:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298748	2301943	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000250;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000250;transcript_name=HG00140_ch_T0000250;gene_name=CD99P1;ID=intron:HG00140_ch_T0000250:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2301944	2301988	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000250;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000250;transcript_name=HG00140_ch_T0000250;gene_name=CD99P1;ID=exon:HG00140_ch_T0000250:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2301989	2302638	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000250;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000250;transcript_name=HG00140_ch_T0000250;gene_name=CD99P1;ID=intron:HG00140_ch_T0000250:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2302639	2302707	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000250;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000250;transcript_name=HG00140_ch_T0000250;gene_name=CD99P1;ID=exon:HG00140_ch_T0000250:8;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2302708	2305854	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000250;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000250;transcript_name=HG00140_ch_T0000250;gene_name=CD99P1;ID=intron:HG00140_ch_T0000250:8;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2305855	2305900	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000250;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000250;transcript_name=HG00140_ch_T0000250;gene_name=CD99P1;ID=exon:HG00140_ch_T0000250:9;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2305901	2317511	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000250;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000250;transcript_name=HG00140_ch_T0000250;gene_name=CD99P1;ID=intron:HG00140_ch_T0000250:9;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2317512	2317865	.	+	.	source_transcript=ENST00000850777.1;source_transcript_name=CD99P1-289;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850777.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850777.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000250;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000250;transcript_name=HG00140_ch_T0000250;gene_name=CD99P1;ID=exon:HG00140_ch_T0000250:10;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2288648	2306541	1000	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000251;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000251;gene_name=CD99P1;ID=HG00140_ch_T0000251;Name=CD99P1
HG00140_chrY	CAT	exon	2288648	2288723	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000251;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000251;transcript_name=HG00140_ch_T0000251;gene_name=CD99P1;ID=exon:HG00140_ch_T0000251:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2288724	2290250	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000251;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000251;transcript_name=HG00140_ch_T0000251;gene_name=CD99P1;ID=intron:HG00140_ch_T0000251:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2290251	2290293	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000251;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000251;transcript_name=HG00140_ch_T0000251;gene_name=CD99P1;ID=exon:HG00140_ch_T0000251:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2290294	2291406	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000251;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000251;transcript_name=HG00140_ch_T0000251;gene_name=CD99P1;ID=intron:HG00140_ch_T0000251:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2291407	2291475	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000251;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000251;transcript_name=HG00140_ch_T0000251;gene_name=CD99P1;ID=exon:HG00140_ch_T0000251:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2291476	2295071	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000251;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000251;transcript_name=HG00140_ch_T0000251;gene_name=CD99P1;ID=intron:HG00140_ch_T0000251:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2295072	2295225	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000251;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000251;transcript_name=HG00140_ch_T0000251;gene_name=CD99P1;ID=exon:HG00140_ch_T0000251:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2295226	2296728	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000251;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000251;transcript_name=HG00140_ch_T0000251;gene_name=CD99P1;ID=intron:HG00140_ch_T0000251:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2296729	2296838	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000251;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000251;transcript_name=HG00140_ch_T0000251;gene_name=CD99P1;ID=exon:HG00140_ch_T0000251:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2296839	2297989	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000251;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000251;transcript_name=HG00140_ch_T0000251;gene_name=CD99P1;ID=intron:HG00140_ch_T0000251:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2297990	2298034	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000251;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000251;transcript_name=HG00140_ch_T0000251;gene_name=CD99P1;ID=exon:HG00140_ch_T0000251:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298035	2298678	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000251;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000251;transcript_name=HG00140_ch_T0000251;gene_name=CD99P1;ID=intron:HG00140_ch_T0000251:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2298679	2298747	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000251;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000251;transcript_name=HG00140_ch_T0000251;gene_name=CD99P1;ID=exon:HG00140_ch_T0000251:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298748	2302638	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000251;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000251;transcript_name=HG00140_ch_T0000251;gene_name=CD99P1;ID=intron:HG00140_ch_T0000251:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2302639	2302707	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000251;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000251;transcript_name=HG00140_ch_T0000251;gene_name=CD99P1;ID=exon:HG00140_ch_T0000251:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2302708	2305854	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000251;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000251;transcript_name=HG00140_ch_T0000251;gene_name=CD99P1;ID=intron:HG00140_ch_T0000251:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2305855	2305900	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000251;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000251;transcript_name=HG00140_ch_T0000251;gene_name=CD99P1;ID=exon:HG00140_ch_T0000251:8;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2305901	2306361	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000251;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000251;transcript_name=HG00140_ch_T0000251;gene_name=CD99P1;ID=intron:HG00140_ch_T0000251:8;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2306362	2306541	.	+	.	source_transcript=ENST00000850791.1;source_transcript_name=CD99P1-303;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000251;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000251;transcript_name=HG00140_ch_T0000251;gene_name=CD99P1;ID=exon:HG00140_ch_T0000251:9;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2288663	2308085	1000	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000253;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000253;gene_name=CD99P1;ID=HG00140_ch_T0000253;Name=CD99P1
HG00140_chrY	CAT	exon	2288663	2288723	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000253;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000253;transcript_name=HG00140_ch_T0000253;gene_name=CD99P1;ID=exon:HG00140_ch_T0000253:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2288724	2290250	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000253;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000253;transcript_name=HG00140_ch_T0000253;gene_name=CD99P1;ID=intron:HG00140_ch_T0000253:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2290251	2290293	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000253;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000253;transcript_name=HG00140_ch_T0000253;gene_name=CD99P1;ID=exon:HG00140_ch_T0000253:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2290294	2291406	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000253;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000253;transcript_name=HG00140_ch_T0000253;gene_name=CD99P1;ID=intron:HG00140_ch_T0000253:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2291407	2291475	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000253;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000253;transcript_name=HG00140_ch_T0000253;gene_name=CD99P1;ID=exon:HG00140_ch_T0000253:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2291476	2295071	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000253;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000253;transcript_name=HG00140_ch_T0000253;gene_name=CD99P1;ID=intron:HG00140_ch_T0000253:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2295072	2295225	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000253;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000253;transcript_name=HG00140_ch_T0000253;gene_name=CD99P1;ID=exon:HG00140_ch_T0000253:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2295226	2297989	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000253;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000253;transcript_name=HG00140_ch_T0000253;gene_name=CD99P1;ID=intron:HG00140_ch_T0000253:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2297990	2298034	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000253;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000253;transcript_name=HG00140_ch_T0000253;gene_name=CD99P1;ID=exon:HG00140_ch_T0000253:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298035	2298678	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000253;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000253;transcript_name=HG00140_ch_T0000253;gene_name=CD99P1;ID=intron:HG00140_ch_T0000253:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2298679	2298747	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000253;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000253;transcript_name=HG00140_ch_T0000253;gene_name=CD99P1;ID=exon:HG00140_ch_T0000253:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298748	2302638	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000253;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000253;transcript_name=HG00140_ch_T0000253;gene_name=CD99P1;ID=intron:HG00140_ch_T0000253:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2302639	2302707	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000253;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000253;transcript_name=HG00140_ch_T0000253;gene_name=CD99P1;ID=exon:HG00140_ch_T0000253:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2302708	2305854	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000253;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000253;transcript_name=HG00140_ch_T0000253;gene_name=CD99P1;ID=intron:HG00140_ch_T0000253:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2305855	2305900	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000253;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000253;transcript_name=HG00140_ch_T0000253;gene_name=CD99P1;ID=exon:HG00140_ch_T0000253:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2305901	2307646	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000253;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000253;transcript_name=HG00140_ch_T0000253;gene_name=CD99P1;ID=intron:HG00140_ch_T0000253:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2307647	2308085	.	+	.	source_transcript=ENST00000850789.1;source_transcript_name=CD99P1-301;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000253;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000253;transcript_name=HG00140_ch_T0000253;gene_name=CD99P1;ID=exon:HG00140_ch_T0000253:8;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2288663	2317867	1000	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000254;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000254;gene_name=CD99P1;ID=HG00140_ch_T0000254;Name=CD99P1
HG00140_chrY	CAT	exon	2288663	2288723	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000254;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000254;transcript_name=HG00140_ch_T0000254;gene_name=CD99P1;ID=exon:HG00140_ch_T0000254:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2288724	2290250	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000254;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000254;transcript_name=HG00140_ch_T0000254;gene_name=CD99P1;ID=intron:HG00140_ch_T0000254:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2290251	2290293	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000254;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000254;transcript_name=HG00140_ch_T0000254;gene_name=CD99P1;ID=exon:HG00140_ch_T0000254:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2290294	2291406	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000254;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000254;transcript_name=HG00140_ch_T0000254;gene_name=CD99P1;ID=intron:HG00140_ch_T0000254:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2291407	2291475	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000254;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000254;transcript_name=HG00140_ch_T0000254;gene_name=CD99P1;ID=exon:HG00140_ch_T0000254:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2291476	2295071	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000254;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000254;transcript_name=HG00140_ch_T0000254;gene_name=CD99P1;ID=intron:HG00140_ch_T0000254:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2295072	2295255	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000254;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000254;transcript_name=HG00140_ch_T0000254;gene_name=CD99P1;ID=exon:HG00140_ch_T0000254:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2295256	2297989	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000254;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000254;transcript_name=HG00140_ch_T0000254;gene_name=CD99P1;ID=intron:HG00140_ch_T0000254:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2297990	2298034	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000254;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000254;transcript_name=HG00140_ch_T0000254;gene_name=CD99P1;ID=exon:HG00140_ch_T0000254:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298035	2298678	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000254;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000254;transcript_name=HG00140_ch_T0000254;gene_name=CD99P1;ID=intron:HG00140_ch_T0000254:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2298679	2298747	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000254;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000254;transcript_name=HG00140_ch_T0000254;gene_name=CD99P1;ID=exon:HG00140_ch_T0000254:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298748	2302638	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000254;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000254;transcript_name=HG00140_ch_T0000254;gene_name=CD99P1;ID=intron:HG00140_ch_T0000254:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2302639	2302707	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000254;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000254;transcript_name=HG00140_ch_T0000254;gene_name=CD99P1;ID=exon:HG00140_ch_T0000254:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2302708	2305854	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000254;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000254;transcript_name=HG00140_ch_T0000254;gene_name=CD99P1;ID=intron:HG00140_ch_T0000254:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2305855	2305900	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000254;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000254;transcript_name=HG00140_ch_T0000254;gene_name=CD99P1;ID=exon:HG00140_ch_T0000254:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2305901	2317511	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000254;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000254;transcript_name=HG00140_ch_T0000254;gene_name=CD99P1;ID=intron:HG00140_ch_T0000254:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2317512	2317867	.	+	.	source_transcript=ENST00000850779.1;source_transcript_name=CD99P1-291;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000254;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000254;transcript_name=HG00140_ch_T0000254;gene_name=CD99P1;ID=exon:HG00140_ch_T0000254:8;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2288663	2291651	1000	+	.	source_transcript=ENST00000850795.1;source_transcript_name=CD99P1-307;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850795.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000255;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000255;gene_name=CD99P1;ID=HG00140_ch_T0000255;Name=CD99P1
HG00140_chrY	CAT	exon	2288663	2288723	.	+	.	source_transcript=ENST00000850795.1;source_transcript_name=CD99P1-307;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000255;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000255;transcript_name=HG00140_ch_T0000255;gene_name=CD99P1;ID=exon:HG00140_ch_T0000255:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2288724	2290250	.	+	.	source_transcript=ENST00000850795.1;source_transcript_name=CD99P1-307;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000255;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000255;transcript_name=HG00140_ch_T0000255;gene_name=CD99P1;ID=intron:HG00140_ch_T0000255:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2290251	2290293	.	+	.	source_transcript=ENST00000850795.1;source_transcript_name=CD99P1-307;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000255;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000255;transcript_name=HG00140_ch_T0000255;gene_name=CD99P1;ID=exon:HG00140_ch_T0000255:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2290294	2291406	.	+	.	source_transcript=ENST00000850795.1;source_transcript_name=CD99P1-307;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000255;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000255;transcript_name=HG00140_ch_T0000255;gene_name=CD99P1;ID=intron:HG00140_ch_T0000255:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2291407	2291651	.	+	.	source_transcript=ENST00000850795.1;source_transcript_name=CD99P1-307;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000255;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000255;transcript_name=HG00140_ch_T0000255;gene_name=CD99P1;ID=exon:HG00140_ch_T0000255:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2288663	2317867	1000	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000256;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000256;gene_name=CD99P1;ID=HG00140_ch_T0000256;Name=CD99P1
HG00140_chrY	CAT	exon	2288663	2288723	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000256;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000256;transcript_name=HG00140_ch_T0000256;gene_name=CD99P1;ID=exon:HG00140_ch_T0000256:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2288724	2290250	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000256;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000256;transcript_name=HG00140_ch_T0000256;gene_name=CD99P1;ID=intron:HG00140_ch_T0000256:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2290251	2290293	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000256;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000256;transcript_name=HG00140_ch_T0000256;gene_name=CD99P1;ID=exon:HG00140_ch_T0000256:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2290294	2291370	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000256;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000256;transcript_name=HG00140_ch_T0000256;gene_name=CD99P1;ID=intron:HG00140_ch_T0000256:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2291371	2291475	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000256;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000256;transcript_name=HG00140_ch_T0000256;gene_name=CD99P1;ID=exon:HG00140_ch_T0000256:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2291476	2295071	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000256;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000256;transcript_name=HG00140_ch_T0000256;gene_name=CD99P1;ID=intron:HG00140_ch_T0000256:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2295072	2295225	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000256;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000256;transcript_name=HG00140_ch_T0000256;gene_name=CD99P1;ID=exon:HG00140_ch_T0000256:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2295226	2297989	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000256;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000256;transcript_name=HG00140_ch_T0000256;gene_name=CD99P1;ID=intron:HG00140_ch_T0000256:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2297990	2298034	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000256;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000256;transcript_name=HG00140_ch_T0000256;gene_name=CD99P1;ID=exon:HG00140_ch_T0000256:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298035	2298678	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000256;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000256;transcript_name=HG00140_ch_T0000256;gene_name=CD99P1;ID=intron:HG00140_ch_T0000256:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2298679	2298747	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000256;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000256;transcript_name=HG00140_ch_T0000256;gene_name=CD99P1;ID=exon:HG00140_ch_T0000256:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298748	2302638	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000256;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000256;transcript_name=HG00140_ch_T0000256;gene_name=CD99P1;ID=intron:HG00140_ch_T0000256:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2302639	2302707	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000256;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000256;transcript_name=HG00140_ch_T0000256;gene_name=CD99P1;ID=exon:HG00140_ch_T0000256:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2302708	2305854	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000256;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000256;transcript_name=HG00140_ch_T0000256;gene_name=CD99P1;ID=intron:HG00140_ch_T0000256:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2305855	2305900	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000256;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000256;transcript_name=HG00140_ch_T0000256;gene_name=CD99P1;ID=exon:HG00140_ch_T0000256:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2305901	2317511	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000256;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000256;transcript_name=HG00140_ch_T0000256;gene_name=CD99P1;ID=intron:HG00140_ch_T0000256:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2317512	2317867	.	+	.	source_transcript=ENST00000850780.1;source_transcript_name=CD99P1-292;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000256;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000256;transcript_name=HG00140_ch_T0000256;gene_name=CD99P1;ID=exon:HG00140_ch_T0000256:8;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2288663	2317867	1000	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000257;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000257;gene_name=CD99P1;ID=HG00140_ch_T0000257;Name=CD99P1
HG00140_chrY	CAT	exon	2288663	2288723	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000257;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000257;transcript_name=HG00140_ch_T0000257;gene_name=CD99P1;ID=exon:HG00140_ch_T0000257:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2288724	2290250	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000257;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000257;transcript_name=HG00140_ch_T0000257;gene_name=CD99P1;ID=intron:HG00140_ch_T0000257:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2290251	2290293	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000257;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000257;transcript_name=HG00140_ch_T0000257;gene_name=CD99P1;ID=exon:HG00140_ch_T0000257:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2290294	2297782	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000257;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000257;transcript_name=HG00140_ch_T0000257;gene_name=CD99P1;ID=intron:HG00140_ch_T0000257:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2297783	2297866	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000257;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000257;transcript_name=HG00140_ch_T0000257;gene_name=CD99P1;ID=exon:HG00140_ch_T0000257:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2297867	2297989	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000257;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000257;transcript_name=HG00140_ch_T0000257;gene_name=CD99P1;ID=intron:HG00140_ch_T0000257:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2297990	2298034	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000257;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000257;transcript_name=HG00140_ch_T0000257;gene_name=CD99P1;ID=exon:HG00140_ch_T0000257:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298035	2298678	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000257;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000257;transcript_name=HG00140_ch_T0000257;gene_name=CD99P1;ID=intron:HG00140_ch_T0000257:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2298679	2298747	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000257;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000257;transcript_name=HG00140_ch_T0000257;gene_name=CD99P1;ID=exon:HG00140_ch_T0000257:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298748	2301943	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000257;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000257;transcript_name=HG00140_ch_T0000257;gene_name=CD99P1;ID=intron:HG00140_ch_T0000257:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2301944	2301988	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000257;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000257;transcript_name=HG00140_ch_T0000257;gene_name=CD99P1;ID=exon:HG00140_ch_T0000257:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2301989	2302638	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000257;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000257;transcript_name=HG00140_ch_T0000257;gene_name=CD99P1;ID=intron:HG00140_ch_T0000257:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2302639	2302707	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000257;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000257;transcript_name=HG00140_ch_T0000257;gene_name=CD99P1;ID=exon:HG00140_ch_T0000257:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2302708	2305854	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000257;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000257;transcript_name=HG00140_ch_T0000257;gene_name=CD99P1;ID=intron:HG00140_ch_T0000257:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2305855	2305900	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000257;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000257;transcript_name=HG00140_ch_T0000257;gene_name=CD99P1;ID=exon:HG00140_ch_T0000257:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2305901	2317511	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000257;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000257;transcript_name=HG00140_ch_T0000257;gene_name=CD99P1;ID=intron:HG00140_ch_T0000257:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2317512	2317867	.	+	.	source_transcript=ENST00000850778.1;source_transcript_name=CD99P1-290;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850778.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850778.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000257;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000257;transcript_name=HG00140_ch_T0000257;gene_name=CD99P1;ID=exon:HG00140_ch_T0000257:8;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2288867	2302662	1000	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000258;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000258;gene_name=CD99P1;ID=HG00140_ch_T0000258;Name=CD99P1
HG00140_chrY	CAT	exon	2288867	2288932	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000258;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000258;transcript_name=HG00140_ch_T0000258;gene_name=CD99P1;ID=exon:HG00140_ch_T0000258:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2288933	2290250	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000258;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000258;transcript_name=HG00140_ch_T0000258;gene_name=CD99P1;ID=intron:HG00140_ch_T0000258:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2290251	2290293	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000258;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000258;transcript_name=HG00140_ch_T0000258;gene_name=CD99P1;ID=exon:HG00140_ch_T0000258:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2290294	2291406	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000258;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000258;transcript_name=HG00140_ch_T0000258;gene_name=CD99P1;ID=intron:HG00140_ch_T0000258:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2291407	2291475	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000258;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000258;transcript_name=HG00140_ch_T0000258;gene_name=CD99P1;ID=exon:HG00140_ch_T0000258:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2291476	2295071	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000258;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000258;transcript_name=HG00140_ch_T0000258;gene_name=CD99P1;ID=intron:HG00140_ch_T0000258:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2295072	2295225	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000258;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000258;transcript_name=HG00140_ch_T0000258;gene_name=CD99P1;ID=exon:HG00140_ch_T0000258:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2295226	2297989	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000258;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000258;transcript_name=HG00140_ch_T0000258;gene_name=CD99P1;ID=intron:HG00140_ch_T0000258:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2297990	2298034	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000258;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000258;transcript_name=HG00140_ch_T0000258;gene_name=CD99P1;ID=exon:HG00140_ch_T0000258:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298035	2298678	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000258;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000258;transcript_name=HG00140_ch_T0000258;gene_name=CD99P1;ID=intron:HG00140_ch_T0000258:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2298679	2298747	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000258;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000258;transcript_name=HG00140_ch_T0000258;gene_name=CD99P1;ID=exon:HG00140_ch_T0000258:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298748	2302638	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000258;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000258;transcript_name=HG00140_ch_T0000258;gene_name=CD99P1;ID=intron:HG00140_ch_T0000258:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2302639	2302662	.	+	.	source_transcript=ENST00000850793.1;source_transcript_name=CD99P1-305;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000258;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000258;transcript_name=HG00140_ch_T0000258;gene_name=CD99P1;ID=exon:HG00140_ch_T0000258:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2289223	2317867	1000	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000259;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000259;gene_name=CD99P1;ID=HG00140_ch_T0000259;Name=CD99P1
HG00140_chrY	CAT	exon	2289223	2289457	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000259;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000259;transcript_name=HG00140_ch_T0000259;gene_name=CD99P1;ID=exon:HG00140_ch_T0000259:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2289458	2290250	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000259;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000259;transcript_name=HG00140_ch_T0000259;gene_name=CD99P1;ID=intron:HG00140_ch_T0000259:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2290251	2290293	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000259;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000259;transcript_name=HG00140_ch_T0000259;gene_name=CD99P1;ID=exon:HG00140_ch_T0000259:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2290294	2291406	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000259;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000259;transcript_name=HG00140_ch_T0000259;gene_name=CD99P1;ID=intron:HG00140_ch_T0000259:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2291407	2291475	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000259;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000259;transcript_name=HG00140_ch_T0000259;gene_name=CD99P1;ID=exon:HG00140_ch_T0000259:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2291476	2295071	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000259;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000259;transcript_name=HG00140_ch_T0000259;gene_name=CD99P1;ID=intron:HG00140_ch_T0000259:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2295072	2295225	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000259;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000259;transcript_name=HG00140_ch_T0000259;gene_name=CD99P1;ID=exon:HG00140_ch_T0000259:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2295226	2297989	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000259;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000259;transcript_name=HG00140_ch_T0000259;gene_name=CD99P1;ID=intron:HG00140_ch_T0000259:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2297990	2298034	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000259;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000259;transcript_name=HG00140_ch_T0000259;gene_name=CD99P1;ID=exon:HG00140_ch_T0000259:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298035	2298678	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000259;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000259;transcript_name=HG00140_ch_T0000259;gene_name=CD99P1;ID=intron:HG00140_ch_T0000259:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2298679	2298747	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000259;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000259;transcript_name=HG00140_ch_T0000259;gene_name=CD99P1;ID=exon:HG00140_ch_T0000259:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298748	2301943	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000259;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000259;transcript_name=HG00140_ch_T0000259;gene_name=CD99P1;ID=intron:HG00140_ch_T0000259:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2301944	2301988	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000259;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000259;transcript_name=HG00140_ch_T0000259;gene_name=CD99P1;ID=exon:HG00140_ch_T0000259:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2301989	2302638	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000259;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000259;transcript_name=HG00140_ch_T0000259;gene_name=CD99P1;ID=intron:HG00140_ch_T0000259:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2302639	2302707	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000259;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000259;transcript_name=HG00140_ch_T0000259;gene_name=CD99P1;ID=exon:HG00140_ch_T0000259:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2302708	2305854	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000259;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000259;transcript_name=HG00140_ch_T0000259;gene_name=CD99P1;ID=intron:HG00140_ch_T0000259:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2305855	2305900	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000259;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000259;transcript_name=HG00140_ch_T0000259;gene_name=CD99P1;ID=exon:HG00140_ch_T0000259:8;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2305901	2317511	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000259;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000259;transcript_name=HG00140_ch_T0000259;gene_name=CD99P1;ID=intron:HG00140_ch_T0000259:8;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2317512	2317867	.	+	.	source_transcript=ENST00000850781.1;source_transcript_name=CD99P1-293;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850781.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000259;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000259;transcript_name=HG00140_ch_T0000259;gene_name=CD99P1;ID=exon:HG00140_ch_T0000259:9;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2289262	2317860	1000	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000260;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000260;gene_name=CD99P1;ID=HG00140_ch_T0000260;Name=CD99P1
HG00140_chrY	CAT	exon	2289262	2289457	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000260;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000260;transcript_name=HG00140_ch_T0000260;gene_name=CD99P1;ID=exon:HG00140_ch_T0000260:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2289458	2290250	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000260;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000260;transcript_name=HG00140_ch_T0000260;gene_name=CD99P1;ID=intron:HG00140_ch_T0000260:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2290251	2290293	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000260;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000260;transcript_name=HG00140_ch_T0000260;gene_name=CD99P1;ID=exon:HG00140_ch_T0000260:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2290294	2291406	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000260;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000260;transcript_name=HG00140_ch_T0000260;gene_name=CD99P1;ID=intron:HG00140_ch_T0000260:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2291407	2291475	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000260;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000260;transcript_name=HG00140_ch_T0000260;gene_name=CD99P1;ID=exon:HG00140_ch_T0000260:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2291476	2297989	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000260;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000260;transcript_name=HG00140_ch_T0000260;gene_name=CD99P1;ID=intron:HG00140_ch_T0000260:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2297990	2298034	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000260;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000260;transcript_name=HG00140_ch_T0000260;gene_name=CD99P1;ID=exon:HG00140_ch_T0000260:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298035	2298678	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000260;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000260;transcript_name=HG00140_ch_T0000260;gene_name=CD99P1;ID=intron:HG00140_ch_T0000260:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2298679	2298747	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000260;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000260;transcript_name=HG00140_ch_T0000260;gene_name=CD99P1;ID=exon:HG00140_ch_T0000260:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298748	2302602	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000260;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000260;transcript_name=HG00140_ch_T0000260;gene_name=CD99P1;ID=intron:HG00140_ch_T0000260:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2302603	2302707	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000260;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000260;transcript_name=HG00140_ch_T0000260;gene_name=CD99P1;ID=exon:HG00140_ch_T0000260:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2302708	2305854	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000260;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000260;transcript_name=HG00140_ch_T0000260;gene_name=CD99P1;ID=intron:HG00140_ch_T0000260:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2305855	2305900	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000260;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000260;transcript_name=HG00140_ch_T0000260;gene_name=CD99P1;ID=exon:HG00140_ch_T0000260:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2305901	2317511	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000260;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000260;transcript_name=HG00140_ch_T0000260;gene_name=CD99P1;ID=intron:HG00140_ch_T0000260:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2317512	2317860	.	+	.	source_transcript=ENST00000850782.1;source_transcript_name=CD99P1-294;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850782.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850782.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000260;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000260;transcript_name=HG00140_ch_T0000260;gene_name=CD99P1;ID=exon:HG00140_ch_T0000260:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2289610	2317871	1000	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000261;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000261;gene_name=CD99P1;ID=HG00140_ch_T0000261;Name=CD99P1
HG00140_chrY	CAT	exon	2289610	2290293	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000261;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000261;transcript_name=HG00140_ch_T0000261;gene_name=CD99P1;ID=exon:HG00140_ch_T0000261:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2290294	2291406	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000261;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000261;transcript_name=HG00140_ch_T0000261;gene_name=CD99P1;ID=intron:HG00140_ch_T0000261:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2291407	2291475	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000261;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000261;transcript_name=HG00140_ch_T0000261;gene_name=CD99P1;ID=exon:HG00140_ch_T0000261:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2291476	2295071	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000261;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000261;transcript_name=HG00140_ch_T0000261;gene_name=CD99P1;ID=intron:HG00140_ch_T0000261:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2295072	2295225	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000261;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000261;transcript_name=HG00140_ch_T0000261;gene_name=CD99P1;ID=exon:HG00140_ch_T0000261:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2295226	2297989	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000261;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000261;transcript_name=HG00140_ch_T0000261;gene_name=CD99P1;ID=intron:HG00140_ch_T0000261:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2297990	2298034	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000261;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000261;transcript_name=HG00140_ch_T0000261;gene_name=CD99P1;ID=exon:HG00140_ch_T0000261:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298035	2298678	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000261;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000261;transcript_name=HG00140_ch_T0000261;gene_name=CD99P1;ID=intron:HG00140_ch_T0000261:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2298679	2298747	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000261;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000261;transcript_name=HG00140_ch_T0000261;gene_name=CD99P1;ID=exon:HG00140_ch_T0000261:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298748	2302638	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000261;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000261;transcript_name=HG00140_ch_T0000261;gene_name=CD99P1;ID=intron:HG00140_ch_T0000261:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2302639	2302707	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000261;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000261;transcript_name=HG00140_ch_T0000261;gene_name=CD99P1;ID=exon:HG00140_ch_T0000261:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2302708	2305854	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000261;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000261;transcript_name=HG00140_ch_T0000261;gene_name=CD99P1;ID=intron:HG00140_ch_T0000261:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2305855	2305900	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000261;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000261;transcript_name=HG00140_ch_T0000261;gene_name=CD99P1;ID=exon:HG00140_ch_T0000261:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2305901	2317511	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000261;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000261;transcript_name=HG00140_ch_T0000261;gene_name=CD99P1;ID=intron:HG00140_ch_T0000261:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2317512	2317871	.	+	.	source_transcript=ENST00000850783.1;source_transcript_name=CD99P1-295;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000261;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000261;transcript_name=HG00140_ch_T0000261;gene_name=CD99P1;ID=exon:HG00140_ch_T0000261:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2294319	2317874	1000	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000263;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000263;gene_name=CD99P1;ID=HG00140_ch_T0000263;Name=CD99P1
HG00140_chrY	CAT	exon	2294319	2294383	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000263;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000263;transcript_name=HG00140_ch_T0000263;gene_name=CD99P1;ID=exon:HG00140_ch_T0000263:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2294384	2295071	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000263;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000263;transcript_name=HG00140_ch_T0000263;gene_name=CD99P1;ID=intron:HG00140_ch_T0000263:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2295072	2295225	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000263;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000263;transcript_name=HG00140_ch_T0000263;gene_name=CD99P1;ID=exon:HG00140_ch_T0000263:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2295226	2297989	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000263;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000263;transcript_name=HG00140_ch_T0000263;gene_name=CD99P1;ID=intron:HG00140_ch_T0000263:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2297990	2298034	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000263;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000263;transcript_name=HG00140_ch_T0000263;gene_name=CD99P1;ID=exon:HG00140_ch_T0000263:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298035	2298678	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000263;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000263;transcript_name=HG00140_ch_T0000263;gene_name=CD99P1;ID=intron:HG00140_ch_T0000263:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2298679	2298747	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000263;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000263;transcript_name=HG00140_ch_T0000263;gene_name=CD99P1;ID=exon:HG00140_ch_T0000263:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298748	2302638	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000263;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000263;transcript_name=HG00140_ch_T0000263;gene_name=CD99P1;ID=intron:HG00140_ch_T0000263:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2302639	2302707	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000263;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000263;transcript_name=HG00140_ch_T0000263;gene_name=CD99P1;ID=exon:HG00140_ch_T0000263:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2302708	2305854	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000263;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000263;transcript_name=HG00140_ch_T0000263;gene_name=CD99P1;ID=intron:HG00140_ch_T0000263:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2305855	2305900	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000263;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000263;transcript_name=HG00140_ch_T0000263;gene_name=CD99P1;ID=exon:HG00140_ch_T0000263:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2305901	2317511	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000263;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000263;transcript_name=HG00140_ch_T0000263;gene_name=CD99P1;ID=intron:HG00140_ch_T0000263:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2317512	2317874	.	+	.	source_transcript=ENST00000850784.1;source_transcript_name=CD99P1-296;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000263;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000263;transcript_name=HG00140_ch_T0000263;gene_name=CD99P1;ID=exon:HG00140_ch_T0000263:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2294324	2317867	1000	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000264;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000264;gene_name=CD99P1;ID=HG00140_ch_T0000264;Name=CD99P1
HG00140_chrY	CAT	exon	2294324	2294383	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000264;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000264;transcript_name=HG00140_ch_T0000264;gene_name=CD99P1;ID=exon:HG00140_ch_T0000264:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2294384	2295071	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000264;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000264;transcript_name=HG00140_ch_T0000264;gene_name=CD99P1;ID=intron:HG00140_ch_T0000264:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2295072	2295225	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000264;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000264;transcript_name=HG00140_ch_T0000264;gene_name=CD99P1;ID=exon:HG00140_ch_T0000264:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2295226	2297989	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000264;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000264;transcript_name=HG00140_ch_T0000264;gene_name=CD99P1;ID=intron:HG00140_ch_T0000264:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2297990	2298034	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000264;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000264;transcript_name=HG00140_ch_T0000264;gene_name=CD99P1;ID=exon:HG00140_ch_T0000264:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298035	2298678	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000264;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000264;transcript_name=HG00140_ch_T0000264;gene_name=CD99P1;ID=intron:HG00140_ch_T0000264:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2298679	2298747	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000264;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000264;transcript_name=HG00140_ch_T0000264;gene_name=CD99P1;ID=exon:HG00140_ch_T0000264:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298748	2301943	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000264;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000264;transcript_name=HG00140_ch_T0000264;gene_name=CD99P1;ID=intron:HG00140_ch_T0000264:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2301944	2301988	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000264;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000264;transcript_name=HG00140_ch_T0000264;gene_name=CD99P1;ID=exon:HG00140_ch_T0000264:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2301989	2302638	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000264;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000264;transcript_name=HG00140_ch_T0000264;gene_name=CD99P1;ID=intron:HG00140_ch_T0000264:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2302639	2302707	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000264;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000264;transcript_name=HG00140_ch_T0000264;gene_name=CD99P1;ID=exon:HG00140_ch_T0000264:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2302708	2305854	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000264;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000264;transcript_name=HG00140_ch_T0000264;gene_name=CD99P1;ID=intron:HG00140_ch_T0000264:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2305855	2305900	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000264;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000264;transcript_name=HG00140_ch_T0000264;gene_name=CD99P1;ID=exon:HG00140_ch_T0000264:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2305901	2317511	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000264;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000264;transcript_name=HG00140_ch_T0000264;gene_name=CD99P1;ID=intron:HG00140_ch_T0000264:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2317512	2317867	.	+	.	source_transcript=ENST00000850785.1;source_transcript_name=CD99P1-297;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000264;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000264;transcript_name=HG00140_ch_T0000264;gene_name=CD99P1;ID=exon:HG00140_ch_T0000264:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2294343	2317873	1000	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000265;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000265;gene_name=CD99P1;ID=HG00140_ch_T0000265;Name=CD99P1
HG00140_chrY	CAT	exon	2294343	2294383	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000265;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000265;transcript_name=HG00140_ch_T0000265;gene_name=CD99P1;ID=exon:HG00140_ch_T0000265:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2294384	2295071	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000265;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000265;transcript_name=HG00140_ch_T0000265;gene_name=CD99P1;ID=intron:HG00140_ch_T0000265:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2295072	2295255	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000265;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000265;transcript_name=HG00140_ch_T0000265;gene_name=CD99P1;ID=exon:HG00140_ch_T0000265:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2295256	2297989	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000265;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000265;transcript_name=HG00140_ch_T0000265;gene_name=CD99P1;ID=intron:HG00140_ch_T0000265:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2297990	2298034	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000265;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000265;transcript_name=HG00140_ch_T0000265;gene_name=CD99P1;ID=exon:HG00140_ch_T0000265:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298035	2298678	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000265;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000265;transcript_name=HG00140_ch_T0000265;gene_name=CD99P1;ID=intron:HG00140_ch_T0000265:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2298679	2298747	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000265;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000265;transcript_name=HG00140_ch_T0000265;gene_name=CD99P1;ID=exon:HG00140_ch_T0000265:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298748	2302638	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000265;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000265;transcript_name=HG00140_ch_T0000265;gene_name=CD99P1;ID=intron:HG00140_ch_T0000265:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2302639	2302707	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000265;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000265;transcript_name=HG00140_ch_T0000265;gene_name=CD99P1;ID=exon:HG00140_ch_T0000265:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2302708	2305854	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000265;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000265;transcript_name=HG00140_ch_T0000265;gene_name=CD99P1;ID=intron:HG00140_ch_T0000265:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2305855	2305900	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000265;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000265;transcript_name=HG00140_ch_T0000265;gene_name=CD99P1;ID=exon:HG00140_ch_T0000265:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2305901	2317511	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000265;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000265;transcript_name=HG00140_ch_T0000265;gene_name=CD99P1;ID=intron:HG00140_ch_T0000265:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2317512	2317873	.	+	.	source_transcript=ENST00000850786.1;source_transcript_name=CD99P1-298;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000265;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000265;transcript_name=HG00140_ch_T0000265;gene_name=CD99P1;ID=exon:HG00140_ch_T0000265:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2295871	2318232	1000	+	.	source_transcript=ENST00000711253.1;source_transcript_name=CD99P1-261;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711253.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000266;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000266;gene_name=CD99P1;ID=HG00140_ch_T0000266;Name=CD99P1
HG00140_chrY	CAT	exon	2295871	2298034	.	+	.	source_transcript=ENST00000711253.1;source_transcript_name=CD99P1-261;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000266;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000266;transcript_name=HG00140_ch_T0000266;gene_name=CD99P1;ID=exon:HG00140_ch_T0000266:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298035	2298678	.	+	.	source_transcript=ENST00000711253.1;source_transcript_name=CD99P1-261;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000266;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000266;transcript_name=HG00140_ch_T0000266;gene_name=CD99P1;ID=intron:HG00140_ch_T0000266:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2298679	2298747	.	+	.	source_transcript=ENST00000711253.1;source_transcript_name=CD99P1-261;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000266;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000266;transcript_name=HG00140_ch_T0000266;gene_name=CD99P1;ID=exon:HG00140_ch_T0000266:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298748	2302638	.	+	.	source_transcript=ENST00000711253.1;source_transcript_name=CD99P1-261;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000266;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000266;transcript_name=HG00140_ch_T0000266;gene_name=CD99P1;ID=intron:HG00140_ch_T0000266:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2302639	2302707	.	+	.	source_transcript=ENST00000711253.1;source_transcript_name=CD99P1-261;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000266;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000266;transcript_name=HG00140_ch_T0000266;gene_name=CD99P1;ID=exon:HG00140_ch_T0000266:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2302708	2305854	.	+	.	source_transcript=ENST00000711253.1;source_transcript_name=CD99P1-261;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000266;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000266;transcript_name=HG00140_ch_T0000266;gene_name=CD99P1;ID=intron:HG00140_ch_T0000266:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2305855	2305900	.	+	.	source_transcript=ENST00000711253.1;source_transcript_name=CD99P1-261;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000266;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000266;transcript_name=HG00140_ch_T0000266;gene_name=CD99P1;ID=exon:HG00140_ch_T0000266:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2305901	2317511	.	+	.	source_transcript=ENST00000711253.1;source_transcript_name=CD99P1-261;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000266;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000266;transcript_name=HG00140_ch_T0000266;gene_name=CD99P1;ID=intron:HG00140_ch_T0000266:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2317512	2318232	.	+	.	source_transcript=ENST00000711253.1;source_transcript_name=CD99P1-261;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000266;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000266;transcript_name=HG00140_ch_T0000266;gene_name=CD99P1;ID=exon:HG00140_ch_T0000266:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2297950	2317867	1000	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000267;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000267;gene_name=CD99P1;ID=HG00140_ch_T0000267;Name=CD99P1
HG00140_chrY	CAT	exon	2297950	2298034	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000267;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000267;transcript_name=HG00140_ch_T0000267;gene_name=CD99P1;ID=exon:HG00140_ch_T0000267:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298035	2298678	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000267;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000267;transcript_name=HG00140_ch_T0000267;gene_name=CD99P1;ID=intron:HG00140_ch_T0000267:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2298679	2298747	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000267;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000267;transcript_name=HG00140_ch_T0000267;gene_name=CD99P1;ID=exon:HG00140_ch_T0000267:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298748	2301943	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000267;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000267;transcript_name=HG00140_ch_T0000267;gene_name=CD99P1;ID=intron:HG00140_ch_T0000267:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2301944	2301988	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000267;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000267;transcript_name=HG00140_ch_T0000267;gene_name=CD99P1;ID=exon:HG00140_ch_T0000267:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2301989	2302638	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000267;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000267;transcript_name=HG00140_ch_T0000267;gene_name=CD99P1;ID=intron:HG00140_ch_T0000267:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2302639	2302707	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000267;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000267;transcript_name=HG00140_ch_T0000267;gene_name=CD99P1;ID=exon:HG00140_ch_T0000267:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2302708	2305854	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000267;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000267;transcript_name=HG00140_ch_T0000267;gene_name=CD99P1;ID=intron:HG00140_ch_T0000267:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2305855	2305900	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000267;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000267;transcript_name=HG00140_ch_T0000267;gene_name=CD99P1;ID=exon:HG00140_ch_T0000267:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2305901	2317511	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000267;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000267;transcript_name=HG00140_ch_T0000267;gene_name=CD99P1;ID=intron:HG00140_ch_T0000267:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2317512	2317867	.	+	.	source_transcript=ENST00000850787.1;source_transcript_name=CD99P1-299;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000267;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000267;transcript_name=HG00140_ch_T0000267;gene_name=CD99P1;ID=exon:HG00140_ch_T0000267:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2297975	2338455	1000	+	.	source_transcript=ENST00000850757.1;source_transcript_name=CD99P1-269;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850757.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000268;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000268;gene_name=CD99P1;ID=HG00140_ch_T0000268;Name=CD99P1
HG00140_chrY	CAT	exon	2297975	2298034	.	+	.	source_transcript=ENST00000850757.1;source_transcript_name=CD99P1-269;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850757.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000268;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000268;transcript_name=HG00140_ch_T0000268;gene_name=CD99P1;ID=exon:HG00140_ch_T0000268:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298035	2298678	.	+	.	source_transcript=ENST00000850757.1;source_transcript_name=CD99P1-269;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850757.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000268;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000268;transcript_name=HG00140_ch_T0000268;gene_name=CD99P1;ID=intron:HG00140_ch_T0000268:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2298679	2298747	.	+	.	source_transcript=ENST00000850757.1;source_transcript_name=CD99P1-269;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850757.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000268;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000268;transcript_name=HG00140_ch_T0000268;gene_name=CD99P1;ID=exon:HG00140_ch_T0000268:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298748	2302638	.	+	.	source_transcript=ENST00000850757.1;source_transcript_name=CD99P1-269;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850757.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000268;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000268;transcript_name=HG00140_ch_T0000268;gene_name=CD99P1;ID=intron:HG00140_ch_T0000268:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2302639	2302707	.	+	.	source_transcript=ENST00000850757.1;source_transcript_name=CD99P1-269;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850757.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000268;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000268;transcript_name=HG00140_ch_T0000268;gene_name=CD99P1;ID=exon:HG00140_ch_T0000268:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2302708	2305854	.	+	.	source_transcript=ENST00000850757.1;source_transcript_name=CD99P1-269;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850757.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000268;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000268;transcript_name=HG00140_ch_T0000268;gene_name=CD99P1;ID=intron:HG00140_ch_T0000268:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2305855	2305900	.	+	.	source_transcript=ENST00000850757.1;source_transcript_name=CD99P1-269;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850757.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000268;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000268;transcript_name=HG00140_ch_T0000268;gene_name=CD99P1;ID=exon:HG00140_ch_T0000268:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2305901	2338026	.	+	.	source_transcript=ENST00000850757.1;source_transcript_name=CD99P1-269;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850757.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000268;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000268;transcript_name=HG00140_ch_T0000268;gene_name=CD99P1;ID=intron:HG00140_ch_T0000268:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2338027	2338455	.	+	.	source_transcript=ENST00000850757.1;source_transcript_name=CD99P1-269;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850757.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000268;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000268;transcript_name=HG00140_ch_T0000268;gene_name=CD99P1;ID=exon:HG00140_ch_T0000268:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2298013	2317867	1000	+	.	source_transcript=ENST00000850788.1;source_transcript_name=CD99P1-300;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850788.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000269;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_G0000046;transcript_name=HG00140_ch_T0000269;gene_name=CD99P1;ID=HG00140_ch_T0000269;Name=CD99P1
HG00140_chrY	CAT	exon	2298013	2298034	.	+	.	source_transcript=ENST00000850788.1;source_transcript_name=CD99P1-300;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000269;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000269;transcript_name=HG00140_ch_T0000269;gene_name=CD99P1;ID=exon:HG00140_ch_T0000269:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298035	2298678	.	+	.	source_transcript=ENST00000850788.1;source_transcript_name=CD99P1-300;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000269;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000269;transcript_name=HG00140_ch_T0000269;gene_name=CD99P1;ID=intron:HG00140_ch_T0000269:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2298679	2298747	.	+	.	source_transcript=ENST00000850788.1;source_transcript_name=CD99P1-300;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000269;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000269;transcript_name=HG00140_ch_T0000269;gene_name=CD99P1;ID=exon:HG00140_ch_T0000269:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298748	2305854	.	+	.	source_transcript=ENST00000850788.1;source_transcript_name=CD99P1-300;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000269;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000269;transcript_name=HG00140_ch_T0000269;gene_name=CD99P1;ID=intron:HG00140_ch_T0000269:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2305855	2305900	.	+	.	source_transcript=ENST00000850788.1;source_transcript_name=CD99P1-300;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000269;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000269;transcript_name=HG00140_ch_T0000269;gene_name=CD99P1;ID=exon:HG00140_ch_T0000269:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2305901	2317511	.	+	.	source_transcript=ENST00000850788.1;source_transcript_name=CD99P1-300;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000269;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000269;transcript_name=HG00140_ch_T0000269;gene_name=CD99P1;ID=intron:HG00140_ch_T0000269:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2317512	2317867	.	+	.	source_transcript=ENST00000850788.1;source_transcript_name=CD99P1-300;source_gene=ENSG00000292362.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292362.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000269;gene_id=HG00140_ch_G0000046;Parent=HG00140_ch_T0000269;transcript_name=HG00140_ch_T0000269;gene_name=CD99P1;ID=exon:HG00140_ch_T0000269:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	2288445	2288508	.	+	.	source_gene_common_name=MIR6089;source_gene=ENSG00000292346.1;alternative_source_transcripts=ENST00000711167.1,ENST00000711167.1;gene_id=HG00140_ch_G0000047;gene_biotype=miRNA;gene_name=MIR6089;gene_sources=liftoff;ID=HG00140_ch_G0000047;Name=MIR6089
HG00140_chrY	CAT	transcript	2288445	2288508	1000	+	.	source_transcript=ENST00000711167.1;source_transcript_name=MIR6089-202;source_gene=ENSG00000292346.1;source_gene_biotype=miRNA;original_gene_id=ENSG00000292346.1;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=ENST00000711167.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711167.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR6089;alternative_source_transcripts=ENST00000711167.1,ENST00000711167.1;transcript_id=HG00140_ch_T0000216;gene_id=HG00140_ch_G0000047;Parent=HG00140_ch_G0000047;transcript_name=HG00140_ch_T0000216;gene_name=MIR6089;ID=HG00140_ch_T0000216;Name=MIR6089
HG00140_chrY	CAT	exon	2288445	2288508	.	+	.	source_transcript=ENST00000711167.1;source_transcript_name=MIR6089-202;source_gene=ENSG00000292346.1;source_gene_biotype=miRNA;original_gene_id=ENSG00000292346.1;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=ENST00000711167.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711167.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR6089;alternative_source_transcripts=ENST00000711167.1,ENST00000711167.1;transcript_id=HG00140_ch_T0000216;gene_id=HG00140_ch_G0000047;Parent=HG00140_ch_T0000216;transcript_name=HG00140_ch_T0000216;gene_name=MIR6089;ID=exon:HG00140_ch_T0000216:0;Name=MIR6089;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	2288658	2302707	.	+	.	source_gene_common_name=CD99P1;source_gene=ENSG00000292361.1;gene_id=HG00140_ch_G0000048;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=CD99P1;gene_sources=liftoff;ID=HG00140_ch_G0000048;Name=CD99P1
HG00140_chrY	CAT	transcript	2288658	2302707	1000	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000252;gene_id=HG00140_ch_G0000048;Parent=HG00140_ch_G0000048;transcript_name=HG00140_ch_T0000252;gene_name=CD99P1;ID=HG00140_ch_T0000252;Name=CD99P1
HG00140_chrY	CAT	exon	2288658	2288723	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000252;gene_id=HG00140_ch_G0000048;Parent=HG00140_ch_T0000252;transcript_name=HG00140_ch_T0000252;gene_name=CD99P1;ID=exon:HG00140_ch_T0000252:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2288724	2290250	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000252;gene_id=HG00140_ch_G0000048;Parent=HG00140_ch_T0000252;transcript_name=HG00140_ch_T0000252;gene_name=CD99P1;ID=intron:HG00140_ch_T0000252:0;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2290251	2290293	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000252;gene_id=HG00140_ch_G0000048;Parent=HG00140_ch_T0000252;transcript_name=HG00140_ch_T0000252;gene_name=CD99P1;ID=exon:HG00140_ch_T0000252:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2290294	2291406	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000252;gene_id=HG00140_ch_G0000048;Parent=HG00140_ch_T0000252;transcript_name=HG00140_ch_T0000252;gene_name=CD99P1;ID=intron:HG00140_ch_T0000252:1;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2291407	2291475	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000252;gene_id=HG00140_ch_G0000048;Parent=HG00140_ch_T0000252;transcript_name=HG00140_ch_T0000252;gene_name=CD99P1;ID=exon:HG00140_ch_T0000252:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2291476	2295071	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000252;gene_id=HG00140_ch_G0000048;Parent=HG00140_ch_T0000252;transcript_name=HG00140_ch_T0000252;gene_name=CD99P1;ID=intron:HG00140_ch_T0000252:2;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2295072	2295225	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000252;gene_id=HG00140_ch_G0000048;Parent=HG00140_ch_T0000252;transcript_name=HG00140_ch_T0000252;gene_name=CD99P1;ID=exon:HG00140_ch_T0000252:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2295226	2297989	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000252;gene_id=HG00140_ch_G0000048;Parent=HG00140_ch_T0000252;transcript_name=HG00140_ch_T0000252;gene_name=CD99P1;ID=intron:HG00140_ch_T0000252:3;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2297990	2298034	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000252;gene_id=HG00140_ch_G0000048;Parent=HG00140_ch_T0000252;transcript_name=HG00140_ch_T0000252;gene_name=CD99P1;ID=exon:HG00140_ch_T0000252:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298035	2298678	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000252;gene_id=HG00140_ch_G0000048;Parent=HG00140_ch_T0000252;transcript_name=HG00140_ch_T0000252;gene_name=CD99P1;ID=intron:HG00140_ch_T0000252:4;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2298679	2298747	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000252;gene_id=HG00140_ch_G0000048;Parent=HG00140_ch_T0000252;transcript_name=HG00140_ch_T0000252;gene_name=CD99P1;ID=exon:HG00140_ch_T0000252:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2298748	2301943	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000252;gene_id=HG00140_ch_G0000048;Parent=HG00140_ch_T0000252;transcript_name=HG00140_ch_T0000252;gene_name=CD99P1;ID=intron:HG00140_ch_T0000252:5;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2301944	2301988	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000252;gene_id=HG00140_ch_G0000048;Parent=HG00140_ch_T0000252;transcript_name=HG00140_ch_T0000252;gene_name=CD99P1;ID=exon:HG00140_ch_T0000252:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2301989	2302638	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000252;gene_id=HG00140_ch_G0000048;Parent=HG00140_ch_T0000252;transcript_name=HG00140_ch_T0000252;gene_name=CD99P1;ID=intron:HG00140_ch_T0000252:6;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2302639	2302707	.	+	.	source_transcript=ENST00000711244.1;source_transcript_name=CD99P1-257;source_gene=ENSG00000292361.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000292361.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000711244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;transcript_id=HG00140_ch_T0000252;gene_id=HG00140_ch_G0000048;Parent=HG00140_ch_T0000252;transcript_name=HG00140_ch_T0000252;gene_name=CD99P1;ID=exon:HG00140_ch_T0000252:7;Name=CD99P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	2292245	2294603	.	-	.	source_gene_common_name=LINC00102;source_gene=ENSG00000292347.1;alternative_source_transcripts=ENST00000711166.1,ENST00000711166.1;gene_id=HG00140_ch_G0000049;gene_biotype=lncRNA;gene_name=LINC00102;gene_sources=liftoff;ID=HG00140_ch_G0000049;Name=LINC00102
HG00140_chrY	CAT	transcript	2292245	2294603	1000	-	.	source_transcript=ENST00000711166.1;source_transcript_name=LINC00102-202;source_gene=ENSG00000292347.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292347.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711166.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711166.1;transcript_score=299.925;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=ENST00000711166.1,ENST00000711166.1;transcript_id=HG00140_ch_T0000262;gene_id=HG00140_ch_G0000049;Parent=HG00140_ch_G0000049;transcript_name=HG00140_ch_T0000262;gene_name=LINC00102;ID=HG00140_ch_T0000262;Name=LINC00102
HG00140_chrY	CAT	exon	2292245	2292953	.	-	.	source_transcript=ENST00000711166.1;source_transcript_name=LINC00102-202;source_gene=ENSG00000292347.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292347.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711166.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711166.1;transcript_score=299.925;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=ENST00000711166.1,ENST00000711166.1;transcript_id=HG00140_ch_T0000262;gene_id=HG00140_ch_G0000049;Parent=HG00140_ch_T0000262;transcript_name=HG00140_ch_T0000262;gene_name=LINC00102;ID=exon:HG00140_ch_T0000262:0;Name=LINC00102;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2292954	2293972	.	-	.	source_transcript=ENST00000711166.1;source_transcript_name=LINC00102-202;source_gene=ENSG00000292347.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292347.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711166.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711166.1;transcript_score=299.925;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=ENST00000711166.1,ENST00000711166.1;transcript_id=HG00140_ch_T0000262;gene_id=HG00140_ch_G0000049;Parent=HG00140_ch_T0000262;transcript_name=HG00140_ch_T0000262;gene_name=LINC00102;ID=intron:HG00140_ch_T0000262:0;Name=LINC00102;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2293973	2294603	.	-	.	source_transcript=ENST00000711166.1;source_transcript_name=LINC00102-202;source_gene=ENSG00000292347.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292347.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000711166.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711166.1;transcript_score=299.925;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=ENST00000711166.1,ENST00000711166.1;transcript_id=HG00140_ch_T0000262;gene_id=HG00140_ch_G0000049;Parent=HG00140_ch_T0000262;transcript_name=HG00140_ch_T0000262;gene_name=LINC00102;ID=exon:HG00140_ch_T0000262:1;Name=LINC00102;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	2370487	2420635	.	+	.	source_gene_common_name=CD99;source_gene=ENSG00000292348.1;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;gene_id=HG00140_ch_G0000050;gene_biotype=protein_coding;gene_name=CD99;gene_sources=liftoff;ID=HG00140_ch_G0000050;Name=CD99
HG00140_chrY	CAT	transcript	2370487	2420626	100	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00140_ch_T0000270;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_G0000050;transcript_name=HG00140_ch_T0000270;gene_name=CD99;ID=HG00140_ch_T0000270;Name=CD99
HG00140_chrY	CAT	exon	2370487	2370727	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00140_ch_T0000270;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000270;transcript_name=HG00140_ch_T0000270;gene_name=CD99;ID=exon:HG00140_ch_T0000270:0;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2370661	2370727	.	+	0	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00140_ch_T0000270;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000270;transcript_name=HG00140_ch_T0000270;gene_name=CD99;ID=CDS:HG00140_ch_T0000270:0;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	2370661	2370663	.	+	0	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00140_ch_T0000270;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000270;transcript_name=HG00140_ch_T0000270;gene_name=CD99;ID=start_codon:HG00140_ch_T0000270;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2370728	2393738	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00140_ch_T0000270;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000270;transcript_name=HG00140_ch_T0000270;gene_name=CD99;ID=intron:HG00140_ch_T0000270:0;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2393739	2393771	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00140_ch_T0000270;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000270;transcript_name=HG00140_ch_T0000270;gene_name=CD99;ID=exon:HG00140_ch_T0000270:1;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2393739	2393771	.	+	2	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00140_ch_T0000270;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000270;transcript_name=HG00140_ch_T0000270;gene_name=CD99;ID=CDS:HG00140_ch_T0000270:1;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2393772	2396923	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00140_ch_T0000270;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000270;transcript_name=HG00140_ch_T0000270;gene_name=CD99;ID=intron:HG00140_ch_T0000270:1;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2396924	2396971	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00140_ch_T0000270;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000270;transcript_name=HG00140_ch_T0000270;gene_name=CD99;ID=exon:HG00140_ch_T0000270:2;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2396924	2396971	.	+	2	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00140_ch_T0000270;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000270;transcript_name=HG00140_ch_T0000270;gene_name=CD99;ID=CDS:HG00140_ch_T0000270:2;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2396972	2398977	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00140_ch_T0000270;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000270;transcript_name=HG00140_ch_T0000270;gene_name=CD99;ID=intron:HG00140_ch_T0000270:2;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2398978	2399022	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00140_ch_T0000270;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000270;transcript_name=HG00140_ch_T0000270;gene_name=CD99;ID=exon:HG00140_ch_T0000270:3;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2398978	2399022	.	+	2	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00140_ch_T0000270;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000270;transcript_name=HG00140_ch_T0000270;gene_name=CD99;ID=CDS:HG00140_ch_T0000270:3;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2399023	2399672	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00140_ch_T0000270;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000270;transcript_name=HG00140_ch_T0000270;gene_name=CD99;ID=intron:HG00140_ch_T0000270:3;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2399673	2399741	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00140_ch_T0000270;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000270;transcript_name=HG00140_ch_T0000270;gene_name=CD99;ID=exon:HG00140_ch_T0000270:4;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2399673	2399741	.	+	2	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00140_ch_T0000270;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000270;transcript_name=HG00140_ch_T0000270;gene_name=CD99;ID=CDS:HG00140_ch_T0000270:4;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2399742	2401943	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00140_ch_T0000270;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000270;transcript_name=HG00140_ch_T0000270;gene_name=CD99;ID=intron:HG00140_ch_T0000270:4;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2401944	2401991	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00140_ch_T0000270;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000270;transcript_name=HG00140_ch_T0000270;gene_name=CD99;ID=exon:HG00140_ch_T0000270:5;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2401944	2401991	.	+	2	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00140_ch_T0000270;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000270;transcript_name=HG00140_ch_T0000270;gene_name=CD99;ID=CDS:HG00140_ch_T0000270:5;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2401992	2402630	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00140_ch_T0000270;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000270;transcript_name=HG00140_ch_T0000270;gene_name=CD99;ID=intron:HG00140_ch_T0000270:5;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2402631	2402681	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00140_ch_T0000270;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000270;transcript_name=HG00140_ch_T0000270;gene_name=CD99;ID=exon:HG00140_ch_T0000270:6;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2402631	2402681	.	+	2	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00140_ch_T0000270;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000270;transcript_name=HG00140_ch_T0000270;gene_name=CD99;ID=CDS:HG00140_ch_T0000270:6;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2402682	2405576	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00140_ch_T0000270;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000270;transcript_name=HG00140_ch_T0000270;gene_name=CD99;ID=intron:HG00140_ch_T0000270:6;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2405577	2405690	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00140_ch_T0000270;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000270;transcript_name=HG00140_ch_T0000270;gene_name=CD99;ID=exon:HG00140_ch_T0000270:7;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2405577	2405690	.	+	2	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00140_ch_T0000270;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000270;transcript_name=HG00140_ch_T0000270;gene_name=CD99;ID=CDS:HG00140_ch_T0000270:7;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2405691	2412688	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00140_ch_T0000270;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000270;transcript_name=HG00140_ch_T0000270;gene_name=CD99;ID=intron:HG00140_ch_T0000270:7;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2412689	2412706	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00140_ch_T0000270;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000270;transcript_name=HG00140_ch_T0000270;gene_name=CD99;ID=exon:HG00140_ch_T0000270:8;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2412689	2412696	.	+	2	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00140_ch_T0000270;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000270;transcript_name=HG00140_ch_T0000270;gene_name=CD99;ID=CDS:HG00140_ch_T0000270:8;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	2412694	2412696	.	+	0	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00140_ch_T0000270;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000270;transcript_name=HG00140_ch_T0000270;gene_name=CD99;ID=stop_codon:HG00140_ch_T0000270;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2412707	2417528	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00140_ch_T0000270;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000270;transcript_name=HG00140_ch_T0000270;gene_name=CD99;ID=intron:HG00140_ch_T0000270:8;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2417529	2417582	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00140_ch_T0000270;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000270;transcript_name=HG00140_ch_T0000270;gene_name=CD99;ID=exon:HG00140_ch_T0000270:9;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2417583	2420104	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00140_ch_T0000270;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000270;transcript_name=HG00140_ch_T0000270;gene_name=CD99;ID=intron:HG00140_ch_T0000270:9;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2420105	2420626	.	+	.	source_transcript=ENST00000711165.1;source_transcript_name=CD99-230;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711165.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711165.1,ENST00000711165.1;transcript_id=HG00140_ch_T0000270;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000270;transcript_name=HG00140_ch_T0000270;gene_name=CD99;ID=exon:HG00140_ch_T0000270:10;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2370576	2420427	100	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00140_ch_T0000271;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_G0000050;transcript_name=HG00140_ch_T0000271;gene_name=CD99;ID=HG00140_ch_T0000271;Name=CD99
HG00140_chrY	CAT	exon	2370576	2370727	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00140_ch_T0000271;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000271;transcript_name=HG00140_ch_T0000271;gene_name=CD99;ID=exon:HG00140_ch_T0000271:0;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2370661	2370727	.	+	0	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00140_ch_T0000271;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000271;transcript_name=HG00140_ch_T0000271;gene_name=CD99;ID=CDS:HG00140_ch_T0000271:0;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	2370661	2370663	.	+	0	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00140_ch_T0000271;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000271;transcript_name=HG00140_ch_T0000271;gene_name=CD99;ID=start_codon:HG00140_ch_T0000271;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2370728	2393738	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00140_ch_T0000271;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000271;transcript_name=HG00140_ch_T0000271;gene_name=CD99;ID=intron:HG00140_ch_T0000271:0;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2393739	2393771	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00140_ch_T0000271;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000271;transcript_name=HG00140_ch_T0000271;gene_name=CD99;ID=exon:HG00140_ch_T0000271:1;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2393739	2393771	.	+	2	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00140_ch_T0000271;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000271;transcript_name=HG00140_ch_T0000271;gene_name=CD99;ID=CDS:HG00140_ch_T0000271:1;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2393772	2398977	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00140_ch_T0000271;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000271;transcript_name=HG00140_ch_T0000271;gene_name=CD99;ID=intron:HG00140_ch_T0000271:1;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2398978	2399022	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00140_ch_T0000271;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000271;transcript_name=HG00140_ch_T0000271;gene_name=CD99;ID=exon:HG00140_ch_T0000271:2;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2398978	2399022	.	+	2	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00140_ch_T0000271;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000271;transcript_name=HG00140_ch_T0000271;gene_name=CD99;ID=CDS:HG00140_ch_T0000271:2;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2399023	2399672	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00140_ch_T0000271;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000271;transcript_name=HG00140_ch_T0000271;gene_name=CD99;ID=intron:HG00140_ch_T0000271:2;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2399673	2399741	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00140_ch_T0000271;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000271;transcript_name=HG00140_ch_T0000271;gene_name=CD99;ID=exon:HG00140_ch_T0000271:3;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2399673	2399741	.	+	2	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00140_ch_T0000271;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000271;transcript_name=HG00140_ch_T0000271;gene_name=CD99;ID=CDS:HG00140_ch_T0000271:3;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2399742	2401943	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00140_ch_T0000271;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000271;transcript_name=HG00140_ch_T0000271;gene_name=CD99;ID=intron:HG00140_ch_T0000271:3;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2401944	2401991	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00140_ch_T0000271;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000271;transcript_name=HG00140_ch_T0000271;gene_name=CD99;ID=exon:HG00140_ch_T0000271:4;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2401944	2401991	.	+	2	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00140_ch_T0000271;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000271;transcript_name=HG00140_ch_T0000271;gene_name=CD99;ID=CDS:HG00140_ch_T0000271:4;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2401992	2402630	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00140_ch_T0000271;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000271;transcript_name=HG00140_ch_T0000271;gene_name=CD99;ID=intron:HG00140_ch_T0000271:4;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2402631	2402681	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00140_ch_T0000271;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000271;transcript_name=HG00140_ch_T0000271;gene_name=CD99;ID=exon:HG00140_ch_T0000271:5;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2402631	2402681	.	+	2	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00140_ch_T0000271;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000271;transcript_name=HG00140_ch_T0000271;gene_name=CD99;ID=CDS:HG00140_ch_T0000271:5;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2402682	2405576	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00140_ch_T0000271;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000271;transcript_name=HG00140_ch_T0000271;gene_name=CD99;ID=intron:HG00140_ch_T0000271:5;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2405577	2405690	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00140_ch_T0000271;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000271;transcript_name=HG00140_ch_T0000271;gene_name=CD99;ID=exon:HG00140_ch_T0000271:6;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2405577	2405690	.	+	2	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00140_ch_T0000271;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000271;transcript_name=HG00140_ch_T0000271;gene_name=CD99;ID=CDS:HG00140_ch_T0000271:6;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2405691	2417525	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00140_ch_T0000271;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000271;transcript_name=HG00140_ch_T0000271;gene_name=CD99;ID=intron:HG00140_ch_T0000271:6;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2417526	2417582	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00140_ch_T0000271;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000271;transcript_name=HG00140_ch_T0000271;gene_name=CD99;ID=exon:HG00140_ch_T0000271:7;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2417526	2417582	.	+	2	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00140_ch_T0000271;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000271;transcript_name=HG00140_ch_T0000271;gene_name=CD99;ID=CDS:HG00140_ch_T0000271:7;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2417583	2420104	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00140_ch_T0000271;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000271;transcript_name=HG00140_ch_T0000271;gene_name=CD99;ID=intron:HG00140_ch_T0000271:7;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2420105	2420427	.	+	.	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00140_ch_T0000271;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000271;transcript_name=HG00140_ch_T0000271;gene_name=CD99;ID=exon:HG00140_ch_T0000271:8;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2420105	2420130	.	+	2	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00140_ch_T0000271;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000271;transcript_name=HG00140_ch_T0000271;gene_name=CD99;ID=CDS:HG00140_ch_T0000271:8;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	2420128	2420130	.	+	0	source_transcript=ENST00000711164.1;source_transcript_name=CD99-229;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711164.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711164.1,ENST00000711164.1;transcript_id=HG00140_ch_T0000271;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000271;transcript_name=HG00140_ch_T0000271;gene_name=CD99;ID=stop_codon:HG00140_ch_T0000271;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2370580	2412999	100	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00140_ch_T0000272;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_G0000050;transcript_name=HG00140_ch_T0000272;gene_name=CD99;ID=HG00140_ch_T0000272;Name=CD99
HG00140_chrY	CAT	exon	2370580	2370727	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00140_ch_T0000272;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000272;transcript_name=HG00140_ch_T0000272;gene_name=CD99;ID=exon:HG00140_ch_T0000272:0;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2370661	2370727	.	+	0	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00140_ch_T0000272;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000272;transcript_name=HG00140_ch_T0000272;gene_name=CD99;ID=CDS:HG00140_ch_T0000272:0;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	2370661	2370663	.	+	0	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00140_ch_T0000272;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000272;transcript_name=HG00140_ch_T0000272;gene_name=CD99;ID=start_codon:HG00140_ch_T0000272;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2370728	2393738	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00140_ch_T0000272;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000272;transcript_name=HG00140_ch_T0000272;gene_name=CD99;ID=intron:HG00140_ch_T0000272:0;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2393739	2393771	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00140_ch_T0000272;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000272;transcript_name=HG00140_ch_T0000272;gene_name=CD99;ID=exon:HG00140_ch_T0000272:1;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2393739	2393771	.	+	2	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00140_ch_T0000272;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000272;transcript_name=HG00140_ch_T0000272;gene_name=CD99;ID=CDS:HG00140_ch_T0000272:1;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2393772	2396923	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00140_ch_T0000272;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000272;transcript_name=HG00140_ch_T0000272;gene_name=CD99;ID=intron:HG00140_ch_T0000272:1;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2396924	2396971	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00140_ch_T0000272;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000272;transcript_name=HG00140_ch_T0000272;gene_name=CD99;ID=exon:HG00140_ch_T0000272:2;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2396924	2396971	.	+	2	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00140_ch_T0000272;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000272;transcript_name=HG00140_ch_T0000272;gene_name=CD99;ID=CDS:HG00140_ch_T0000272:2;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2396972	2398977	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00140_ch_T0000272;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000272;transcript_name=HG00140_ch_T0000272;gene_name=CD99;ID=intron:HG00140_ch_T0000272:2;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2398978	2399022	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00140_ch_T0000272;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000272;transcript_name=HG00140_ch_T0000272;gene_name=CD99;ID=exon:HG00140_ch_T0000272:3;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2398978	2399022	.	+	2	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00140_ch_T0000272;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000272;transcript_name=HG00140_ch_T0000272;gene_name=CD99;ID=CDS:HG00140_ch_T0000272:3;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2399023	2399672	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00140_ch_T0000272;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000272;transcript_name=HG00140_ch_T0000272;gene_name=CD99;ID=intron:HG00140_ch_T0000272:3;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2399673	2399741	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00140_ch_T0000272;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000272;transcript_name=HG00140_ch_T0000272;gene_name=CD99;ID=exon:HG00140_ch_T0000272:4;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2399673	2399741	.	+	2	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00140_ch_T0000272;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000272;transcript_name=HG00140_ch_T0000272;gene_name=CD99;ID=CDS:HG00140_ch_T0000272:4;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2399742	2401943	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00140_ch_T0000272;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000272;transcript_name=HG00140_ch_T0000272;gene_name=CD99;ID=intron:HG00140_ch_T0000272:4;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2401944	2401991	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00140_ch_T0000272;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000272;transcript_name=HG00140_ch_T0000272;gene_name=CD99;ID=exon:HG00140_ch_T0000272:5;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2401944	2401991	.	+	2	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00140_ch_T0000272;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000272;transcript_name=HG00140_ch_T0000272;gene_name=CD99;ID=CDS:HG00140_ch_T0000272:5;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2401992	2402630	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00140_ch_T0000272;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000272;transcript_name=HG00140_ch_T0000272;gene_name=CD99;ID=intron:HG00140_ch_T0000272:5;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2402631	2402681	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00140_ch_T0000272;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000272;transcript_name=HG00140_ch_T0000272;gene_name=CD99;ID=exon:HG00140_ch_T0000272:6;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2402631	2402681	.	+	2	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00140_ch_T0000272;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000272;transcript_name=HG00140_ch_T0000272;gene_name=CD99;ID=CDS:HG00140_ch_T0000272:6;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2402682	2405576	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00140_ch_T0000272;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000272;transcript_name=HG00140_ch_T0000272;gene_name=CD99;ID=intron:HG00140_ch_T0000272:6;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2405577	2405690	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00140_ch_T0000272;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000272;transcript_name=HG00140_ch_T0000272;gene_name=CD99;ID=exon:HG00140_ch_T0000272:7;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2405577	2405690	.	+	2	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00140_ch_T0000272;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000272;transcript_name=HG00140_ch_T0000272;gene_name=CD99;ID=CDS:HG00140_ch_T0000272:7;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2405691	2406612	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00140_ch_T0000272;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000272;transcript_name=HG00140_ch_T0000272;gene_name=CD99;ID=intron:HG00140_ch_T0000272:7;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2406613	2406663	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00140_ch_T0000272;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000272;transcript_name=HG00140_ch_T0000272;gene_name=CD99;ID=exon:HG00140_ch_T0000272:8;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2406613	2406663	.	+	2	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00140_ch_T0000272;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000272;transcript_name=HG00140_ch_T0000272;gene_name=CD99;ID=CDS:HG00140_ch_T0000272:8;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2406664	2412688	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00140_ch_T0000272;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000272;transcript_name=HG00140_ch_T0000272;gene_name=CD99;ID=intron:HG00140_ch_T0000272:8;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2412689	2412999	.	+	.	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00140_ch_T0000272;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000272;transcript_name=HG00140_ch_T0000272;gene_name=CD99;ID=exon:HG00140_ch_T0000272:9;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2412689	2412696	.	+	2	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00140_ch_T0000272;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000272;transcript_name=HG00140_ch_T0000272;gene_name=CD99;ID=CDS:HG00140_ch_T0000272:9;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	2412694	2412696	.	+	0	source_transcript=ENST00000711163.1;source_transcript_name=CD99-228;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711163.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711163.1,ENST00000711163.1;transcript_id=HG00140_ch_T0000272;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000272;transcript_name=HG00140_ch_T0000272;gene_name=CD99;ID=stop_codon:HG00140_ch_T0000272;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2370592	2397334	1000	+	.	source_transcript=ENST00000711162.1;source_transcript_name=CD99-227;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711162.1;transcript_score=298.799;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711162.1,ENST00000711162.1;transcript_id=HG00140_ch_T0000273;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_G0000050;transcript_name=HG00140_ch_T0000273;gene_name=CD99;ID=HG00140_ch_T0000273;Name=CD99
HG00140_chrY	CAT	exon	2370592	2370727	.	+	.	source_transcript=ENST00000711162.1;source_transcript_name=CD99-227;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711162.1;transcript_score=298.799;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711162.1,ENST00000711162.1;transcript_id=HG00140_ch_T0000273;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000273;transcript_name=HG00140_ch_T0000273;gene_name=CD99;ID=exon:HG00140_ch_T0000273:0;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2370728	2393738	.	+	.	source_transcript=ENST00000711162.1;source_transcript_name=CD99-227;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711162.1;transcript_score=298.799;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711162.1,ENST00000711162.1;transcript_id=HG00140_ch_T0000273;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000273;transcript_name=HG00140_ch_T0000273;gene_name=CD99;ID=intron:HG00140_ch_T0000273:0;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2393739	2393771	.	+	.	source_transcript=ENST00000711162.1;source_transcript_name=CD99-227;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711162.1;transcript_score=298.799;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711162.1,ENST00000711162.1;transcript_id=HG00140_ch_T0000273;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000273;transcript_name=HG00140_ch_T0000273;gene_name=CD99;ID=exon:HG00140_ch_T0000273:1;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2393772	2396923	.	+	.	source_transcript=ENST00000711162.1;source_transcript_name=CD99-227;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711162.1;transcript_score=298.799;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711162.1,ENST00000711162.1;transcript_id=HG00140_ch_T0000273;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000273;transcript_name=HG00140_ch_T0000273;gene_name=CD99;ID=intron:HG00140_ch_T0000273:1;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2396924	2397334	.	+	.	source_transcript=ENST00000711162.1;source_transcript_name=CD99-227;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711162.1;transcript_score=298.799;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711162.1,ENST00000711162.1;transcript_id=HG00140_ch_T0000273;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000273;transcript_name=HG00140_ch_T0000273;gene_name=CD99;ID=exon:HG00140_ch_T0000273:2;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2370595	2420635	100	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00140_ch_T0000274;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_G0000050;transcript_name=HG00140_ch_T0000274;gene_name=CD99;ID=HG00140_ch_T0000274;Name=CD99
HG00140_chrY	CAT	exon	2370595	2370727	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00140_ch_T0000274;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000274;transcript_name=HG00140_ch_T0000274;gene_name=CD99;ID=exon:HG00140_ch_T0000274:0;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2370661	2370727	.	+	0	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00140_ch_T0000274;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000274;transcript_name=HG00140_ch_T0000274;gene_name=CD99;ID=CDS:HG00140_ch_T0000274:0;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	2370661	2370663	.	+	0	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00140_ch_T0000274;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000274;transcript_name=HG00140_ch_T0000274;gene_name=CD99;ID=start_codon:HG00140_ch_T0000274;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2370728	2393738	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00140_ch_T0000274;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000274;transcript_name=HG00140_ch_T0000274;gene_name=CD99;ID=intron:HG00140_ch_T0000274:0;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2393739	2393771	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00140_ch_T0000274;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000274;transcript_name=HG00140_ch_T0000274;gene_name=CD99;ID=exon:HG00140_ch_T0000274:1;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2393739	2393771	.	+	2	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00140_ch_T0000274;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000274;transcript_name=HG00140_ch_T0000274;gene_name=CD99;ID=CDS:HG00140_ch_T0000274:1;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2393772	2396923	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00140_ch_T0000274;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000274;transcript_name=HG00140_ch_T0000274;gene_name=CD99;ID=intron:HG00140_ch_T0000274:1;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2396924	2396971	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00140_ch_T0000274;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000274;transcript_name=HG00140_ch_T0000274;gene_name=CD99;ID=exon:HG00140_ch_T0000274:2;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2396924	2396971	.	+	2	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00140_ch_T0000274;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000274;transcript_name=HG00140_ch_T0000274;gene_name=CD99;ID=CDS:HG00140_ch_T0000274:2;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2396972	2398977	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00140_ch_T0000274;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000274;transcript_name=HG00140_ch_T0000274;gene_name=CD99;ID=intron:HG00140_ch_T0000274:2;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2398978	2399022	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00140_ch_T0000274;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000274;transcript_name=HG00140_ch_T0000274;gene_name=CD99;ID=exon:HG00140_ch_T0000274:3;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2398978	2399022	.	+	2	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00140_ch_T0000274;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000274;transcript_name=HG00140_ch_T0000274;gene_name=CD99;ID=CDS:HG00140_ch_T0000274:3;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2399023	2399672	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00140_ch_T0000274;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000274;transcript_name=HG00140_ch_T0000274;gene_name=CD99;ID=intron:HG00140_ch_T0000274:3;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2399673	2399741	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00140_ch_T0000274;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000274;transcript_name=HG00140_ch_T0000274;gene_name=CD99;ID=exon:HG00140_ch_T0000274:4;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2399673	2399741	.	+	2	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00140_ch_T0000274;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000274;transcript_name=HG00140_ch_T0000274;gene_name=CD99;ID=CDS:HG00140_ch_T0000274:4;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2399742	2401943	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00140_ch_T0000274;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000274;transcript_name=HG00140_ch_T0000274;gene_name=CD99;ID=intron:HG00140_ch_T0000274:4;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2401944	2401991	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00140_ch_T0000274;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000274;transcript_name=HG00140_ch_T0000274;gene_name=CD99;ID=exon:HG00140_ch_T0000274:5;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2401944	2401991	.	+	2	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00140_ch_T0000274;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000274;transcript_name=HG00140_ch_T0000274;gene_name=CD99;ID=CDS:HG00140_ch_T0000274:5;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2401992	2402630	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00140_ch_T0000274;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000274;transcript_name=HG00140_ch_T0000274;gene_name=CD99;ID=intron:HG00140_ch_T0000274:5;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2402631	2402681	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00140_ch_T0000274;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000274;transcript_name=HG00140_ch_T0000274;gene_name=CD99;ID=exon:HG00140_ch_T0000274:6;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2402631	2402681	.	+	2	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00140_ch_T0000274;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000274;transcript_name=HG00140_ch_T0000274;gene_name=CD99;ID=CDS:HG00140_ch_T0000274:6;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2402682	2405576	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00140_ch_T0000274;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000274;transcript_name=HG00140_ch_T0000274;gene_name=CD99;ID=intron:HG00140_ch_T0000274:6;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2405577	2405690	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00140_ch_T0000274;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000274;transcript_name=HG00140_ch_T0000274;gene_name=CD99;ID=exon:HG00140_ch_T0000274:7;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2405577	2405690	.	+	2	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00140_ch_T0000274;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000274;transcript_name=HG00140_ch_T0000274;gene_name=CD99;ID=CDS:HG00140_ch_T0000274:7;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2405691	2417525	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00140_ch_T0000274;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000274;transcript_name=HG00140_ch_T0000274;gene_name=CD99;ID=intron:HG00140_ch_T0000274:7;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2417526	2417582	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00140_ch_T0000274;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000274;transcript_name=HG00140_ch_T0000274;gene_name=CD99;ID=exon:HG00140_ch_T0000274:8;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2417526	2417582	.	+	2	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00140_ch_T0000274;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000274;transcript_name=HG00140_ch_T0000274;gene_name=CD99;ID=CDS:HG00140_ch_T0000274:8;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2417583	2420104	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00140_ch_T0000274;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000274;transcript_name=HG00140_ch_T0000274;gene_name=CD99;ID=intron:HG00140_ch_T0000274:8;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2420105	2420635	.	+	.	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00140_ch_T0000274;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000274;transcript_name=HG00140_ch_T0000274;gene_name=CD99;ID=exon:HG00140_ch_T0000274:9;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2420105	2420130	.	+	2	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00140_ch_T0000274;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000274;transcript_name=HG00140_ch_T0000274;gene_name=CD99;ID=CDS:HG00140_ch_T0000274:9;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	2420128	2420130	.	+	0	source_transcript=ENST00000711160.1;source_transcript_name=CD99-225;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711160.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711160.1,ENST00000711160.1;transcript_id=HG00140_ch_T0000274;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000274;transcript_name=HG00140_ch_T0000274;gene_name=CD99;ID=stop_codon:HG00140_ch_T0000274;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2370595	2402751	1000	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=299.799;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=HG00140_ch_T0000275;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_G0000050;transcript_name=HG00140_ch_T0000275;gene_name=CD99;ID=HG00140_ch_T0000275;Name=CD99
HG00140_chrY	CAT	exon	2370595	2370727	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=299.799;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=HG00140_ch_T0000275;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000275;transcript_name=HG00140_ch_T0000275;gene_name=CD99;ID=exon:HG00140_ch_T0000275:0;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2370728	2393738	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=299.799;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=HG00140_ch_T0000275;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000275;transcript_name=HG00140_ch_T0000275;gene_name=CD99;ID=intron:HG00140_ch_T0000275:0;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2393739	2393771	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=299.799;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=HG00140_ch_T0000275;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000275;transcript_name=HG00140_ch_T0000275;gene_name=CD99;ID=exon:HG00140_ch_T0000275:1;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2393772	2396923	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=299.799;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=HG00140_ch_T0000275;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000275;transcript_name=HG00140_ch_T0000275;gene_name=CD99;ID=intron:HG00140_ch_T0000275:1;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2396924	2396971	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=299.799;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=HG00140_ch_T0000275;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000275;transcript_name=HG00140_ch_T0000275;gene_name=CD99;ID=exon:HG00140_ch_T0000275:2;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2396972	2398977	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=299.799;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=HG00140_ch_T0000275;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000275;transcript_name=HG00140_ch_T0000275;gene_name=CD99;ID=intron:HG00140_ch_T0000275:2;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2398978	2399022	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=299.799;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=HG00140_ch_T0000275;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000275;transcript_name=HG00140_ch_T0000275;gene_name=CD99;ID=exon:HG00140_ch_T0000275:3;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2399023	2399672	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=299.799;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=HG00140_ch_T0000275;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000275;transcript_name=HG00140_ch_T0000275;gene_name=CD99;ID=intron:HG00140_ch_T0000275:3;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2399673	2399741	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=299.799;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=HG00140_ch_T0000275;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000275;transcript_name=HG00140_ch_T0000275;gene_name=CD99;ID=exon:HG00140_ch_T0000275:4;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2399742	2401943	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=299.799;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=HG00140_ch_T0000275;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000275;transcript_name=HG00140_ch_T0000275;gene_name=CD99;ID=intron:HG00140_ch_T0000275:4;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2401944	2401991	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=299.799;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=HG00140_ch_T0000275;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000275;transcript_name=HG00140_ch_T0000275;gene_name=CD99;ID=exon:HG00140_ch_T0000275:5;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2401992	2402630	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=299.799;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=HG00140_ch_T0000275;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000275;transcript_name=HG00140_ch_T0000275;gene_name=CD99;ID=intron:HG00140_ch_T0000275:5;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2402631	2402751	.	+	.	source_transcript=ENST00000711161.1;source_transcript_name=CD99-226;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711161.1;transcript_score=299.799;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711161.1,ENST00000711161.1;transcript_id=HG00140_ch_T0000275;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000275;transcript_name=HG00140_ch_T0000275;gene_name=CD99;ID=exon:HG00140_ch_T0000275:6;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2370610	2413004	100	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00140_ch_T0000276;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_G0000050;transcript_name=HG00140_ch_T0000276;gene_name=CD99;ID=HG00140_ch_T0000276;Name=CD99
HG00140_chrY	CAT	exon	2370610	2370727	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00140_ch_T0000276;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000276;transcript_name=HG00140_ch_T0000276;gene_name=CD99;ID=exon:HG00140_ch_T0000276:0;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2370661	2370727	.	+	0	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00140_ch_T0000276;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000276;transcript_name=HG00140_ch_T0000276;gene_name=CD99;ID=CDS:HG00140_ch_T0000276:0;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	2370661	2370663	.	+	0	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00140_ch_T0000276;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000276;transcript_name=HG00140_ch_T0000276;gene_name=CD99;ID=start_codon:HG00140_ch_T0000276;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2370728	2393738	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00140_ch_T0000276;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000276;transcript_name=HG00140_ch_T0000276;gene_name=CD99;ID=intron:HG00140_ch_T0000276:0;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2393739	2393771	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00140_ch_T0000276;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000276;transcript_name=HG00140_ch_T0000276;gene_name=CD99;ID=exon:HG00140_ch_T0000276:1;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2393739	2393771	.	+	2	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00140_ch_T0000276;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000276;transcript_name=HG00140_ch_T0000276;gene_name=CD99;ID=CDS:HG00140_ch_T0000276:1;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2393772	2396923	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00140_ch_T0000276;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000276;transcript_name=HG00140_ch_T0000276;gene_name=CD99;ID=intron:HG00140_ch_T0000276:1;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2396924	2396971	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00140_ch_T0000276;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000276;transcript_name=HG00140_ch_T0000276;gene_name=CD99;ID=exon:HG00140_ch_T0000276:2;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2396924	2396971	.	+	2	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00140_ch_T0000276;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000276;transcript_name=HG00140_ch_T0000276;gene_name=CD99;ID=CDS:HG00140_ch_T0000276:2;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2396972	2398977	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00140_ch_T0000276;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000276;transcript_name=HG00140_ch_T0000276;gene_name=CD99;ID=intron:HG00140_ch_T0000276:2;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2398978	2399022	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00140_ch_T0000276;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000276;transcript_name=HG00140_ch_T0000276;gene_name=CD99;ID=exon:HG00140_ch_T0000276:3;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2398978	2399022	.	+	2	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00140_ch_T0000276;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000276;transcript_name=HG00140_ch_T0000276;gene_name=CD99;ID=CDS:HG00140_ch_T0000276:3;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2399023	2399672	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00140_ch_T0000276;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000276;transcript_name=HG00140_ch_T0000276;gene_name=CD99;ID=intron:HG00140_ch_T0000276:3;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2399673	2399741	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00140_ch_T0000276;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000276;transcript_name=HG00140_ch_T0000276;gene_name=CD99;ID=exon:HG00140_ch_T0000276:4;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2399673	2399741	.	+	2	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00140_ch_T0000276;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000276;transcript_name=HG00140_ch_T0000276;gene_name=CD99;ID=CDS:HG00140_ch_T0000276:4;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2399742	2401943	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00140_ch_T0000276;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000276;transcript_name=HG00140_ch_T0000276;gene_name=CD99;ID=intron:HG00140_ch_T0000276:4;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2401944	2401991	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00140_ch_T0000276;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000276;transcript_name=HG00140_ch_T0000276;gene_name=CD99;ID=exon:HG00140_ch_T0000276:5;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2401944	2401991	.	+	2	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00140_ch_T0000276;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000276;transcript_name=HG00140_ch_T0000276;gene_name=CD99;ID=CDS:HG00140_ch_T0000276:5;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2401992	2402630	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00140_ch_T0000276;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000276;transcript_name=HG00140_ch_T0000276;gene_name=CD99;ID=intron:HG00140_ch_T0000276:5;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2402631	2402681	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00140_ch_T0000276;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000276;transcript_name=HG00140_ch_T0000276;gene_name=CD99;ID=exon:HG00140_ch_T0000276:6;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2402631	2402681	.	+	2	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00140_ch_T0000276;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000276;transcript_name=HG00140_ch_T0000276;gene_name=CD99;ID=CDS:HG00140_ch_T0000276:6;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2402682	2405576	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00140_ch_T0000276;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000276;transcript_name=HG00140_ch_T0000276;gene_name=CD99;ID=intron:HG00140_ch_T0000276:6;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2405577	2405690	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00140_ch_T0000276;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000276;transcript_name=HG00140_ch_T0000276;gene_name=CD99;ID=exon:HG00140_ch_T0000276:7;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2405577	2405690	.	+	2	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00140_ch_T0000276;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000276;transcript_name=HG00140_ch_T0000276;gene_name=CD99;ID=CDS:HG00140_ch_T0000276:7;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2405691	2412688	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00140_ch_T0000276;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000276;transcript_name=HG00140_ch_T0000276;gene_name=CD99;ID=intron:HG00140_ch_T0000276:7;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2412689	2413004	.	+	.	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00140_ch_T0000276;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000276;transcript_name=HG00140_ch_T0000276;gene_name=CD99;ID=exon:HG00140_ch_T0000276:8;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2412689	2412696	.	+	2	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00140_ch_T0000276;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000276;transcript_name=HG00140_ch_T0000276;gene_name=CD99;ID=CDS:HG00140_ch_T0000276:8;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	2412694	2412696	.	+	0	source_transcript=ENST00000711159.1;source_transcript_name=CD99-224;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711159.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711159.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711159.1,ENST00000711159.1;transcript_id=HG00140_ch_T0000276;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000276;transcript_name=HG00140_ch_T0000276;gene_name=CD99;ID=stop_codon:HG00140_ch_T0000276;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2370613	2420616	100	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00140_ch_T0000277;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_G0000050;transcript_name=HG00140_ch_T0000277;gene_name=CD99;ID=HG00140_ch_T0000277;Name=CD99
HG00140_chrY	CAT	exon	2370613	2370727	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00140_ch_T0000277;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000277;transcript_name=HG00140_ch_T0000277;gene_name=CD99;ID=exon:HG00140_ch_T0000277:0;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2370661	2370727	.	+	0	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00140_ch_T0000277;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000277;transcript_name=HG00140_ch_T0000277;gene_name=CD99;ID=CDS:HG00140_ch_T0000277:0;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	2370661	2370663	.	+	0	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00140_ch_T0000277;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000277;transcript_name=HG00140_ch_T0000277;gene_name=CD99;ID=start_codon:HG00140_ch_T0000277;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2370728	2393738	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00140_ch_T0000277;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000277;transcript_name=HG00140_ch_T0000277;gene_name=CD99;ID=intron:HG00140_ch_T0000277:0;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2393739	2393771	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00140_ch_T0000277;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000277;transcript_name=HG00140_ch_T0000277;gene_name=CD99;ID=exon:HG00140_ch_T0000277:1;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2393739	2393771	.	+	2	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00140_ch_T0000277;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000277;transcript_name=HG00140_ch_T0000277;gene_name=CD99;ID=CDS:HG00140_ch_T0000277:1;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2393772	2396923	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00140_ch_T0000277;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000277;transcript_name=HG00140_ch_T0000277;gene_name=CD99;ID=intron:HG00140_ch_T0000277:1;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2396924	2396971	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00140_ch_T0000277;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000277;transcript_name=HG00140_ch_T0000277;gene_name=CD99;ID=exon:HG00140_ch_T0000277:2;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2396924	2396971	.	+	2	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00140_ch_T0000277;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000277;transcript_name=HG00140_ch_T0000277;gene_name=CD99;ID=CDS:HG00140_ch_T0000277:2;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2396972	2398977	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00140_ch_T0000277;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000277;transcript_name=HG00140_ch_T0000277;gene_name=CD99;ID=intron:HG00140_ch_T0000277:2;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2398978	2399022	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00140_ch_T0000277;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000277;transcript_name=HG00140_ch_T0000277;gene_name=CD99;ID=exon:HG00140_ch_T0000277:3;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2398978	2399022	.	+	2	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00140_ch_T0000277;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000277;transcript_name=HG00140_ch_T0000277;gene_name=CD99;ID=CDS:HG00140_ch_T0000277:3;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2399023	2399672	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00140_ch_T0000277;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000277;transcript_name=HG00140_ch_T0000277;gene_name=CD99;ID=intron:HG00140_ch_T0000277:3;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2399673	2399741	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00140_ch_T0000277;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000277;transcript_name=HG00140_ch_T0000277;gene_name=CD99;ID=exon:HG00140_ch_T0000277:4;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2399673	2399741	.	+	2	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00140_ch_T0000277;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000277;transcript_name=HG00140_ch_T0000277;gene_name=CD99;ID=CDS:HG00140_ch_T0000277:4;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2399742	2401943	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00140_ch_T0000277;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000277;transcript_name=HG00140_ch_T0000277;gene_name=CD99;ID=intron:HG00140_ch_T0000277:4;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2401944	2401991	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00140_ch_T0000277;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000277;transcript_name=HG00140_ch_T0000277;gene_name=CD99;ID=exon:HG00140_ch_T0000277:5;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2401944	2401991	.	+	2	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00140_ch_T0000277;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000277;transcript_name=HG00140_ch_T0000277;gene_name=CD99;ID=CDS:HG00140_ch_T0000277:5;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2401992	2402630	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00140_ch_T0000277;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000277;transcript_name=HG00140_ch_T0000277;gene_name=CD99;ID=intron:HG00140_ch_T0000277:5;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2402631	2402681	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00140_ch_T0000277;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000277;transcript_name=HG00140_ch_T0000277;gene_name=CD99;ID=exon:HG00140_ch_T0000277:6;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2402631	2402681	.	+	2	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00140_ch_T0000277;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000277;transcript_name=HG00140_ch_T0000277;gene_name=CD99;ID=CDS:HG00140_ch_T0000277:6;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2402682	2405576	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00140_ch_T0000277;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000277;transcript_name=HG00140_ch_T0000277;gene_name=CD99;ID=intron:HG00140_ch_T0000277:6;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2405577	2405690	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00140_ch_T0000277;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000277;transcript_name=HG00140_ch_T0000277;gene_name=CD99;ID=exon:HG00140_ch_T0000277:7;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2405577	2405690	.	+	2	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00140_ch_T0000277;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000277;transcript_name=HG00140_ch_T0000277;gene_name=CD99;ID=CDS:HG00140_ch_T0000277:7;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2405691	2417528	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00140_ch_T0000277;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000277;transcript_name=HG00140_ch_T0000277;gene_name=CD99;ID=intron:HG00140_ch_T0000277:7;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2417529	2417582	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00140_ch_T0000277;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000277;transcript_name=HG00140_ch_T0000277;gene_name=CD99;ID=exon:HG00140_ch_T0000277:8;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2417529	2417582	.	+	2	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00140_ch_T0000277;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000277;transcript_name=HG00140_ch_T0000277;gene_name=CD99;ID=CDS:HG00140_ch_T0000277:8;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2417583	2420104	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00140_ch_T0000277;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000277;transcript_name=HG00140_ch_T0000277;gene_name=CD99;ID=intron:HG00140_ch_T0000277:8;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2420105	2420616	.	+	.	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00140_ch_T0000277;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000277;transcript_name=HG00140_ch_T0000277;gene_name=CD99;ID=exon:HG00140_ch_T0000277:9;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2420105	2420130	.	+	2	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00140_ch_T0000277;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000277;transcript_name=HG00140_ch_T0000277;gene_name=CD99;ID=CDS:HG00140_ch_T0000277:9;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	2420128	2420130	.	+	0	source_transcript=ENST00000711158.1;source_transcript_name=CD99-223;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711158.1,ENST00000711158.1;transcript_id=HG00140_ch_T0000277;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000277;transcript_name=HG00140_ch_T0000277;gene_name=CD99;ID=stop_codon:HG00140_ch_T0000277;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2370626	2394915	1000	+	.	source_transcript=ENST00000711157.1;source_transcript_name=CD99-222;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711157.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711157.1;transcript_score=299.922;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711157.1,ENST00000711157.1;transcript_id=HG00140_ch_T0000278;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_G0000050;transcript_name=HG00140_ch_T0000278;gene_name=CD99;ID=HG00140_ch_T0000278;Name=CD99
HG00140_chrY	CAT	exon	2370626	2370727	.	+	.	source_transcript=ENST00000711157.1;source_transcript_name=CD99-222;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711157.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711157.1;transcript_score=299.922;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711157.1,ENST00000711157.1;transcript_id=HG00140_ch_T0000278;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000278;transcript_name=HG00140_ch_T0000278;gene_name=CD99;ID=exon:HG00140_ch_T0000278:0;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2370728	2393738	.	+	.	source_transcript=ENST00000711157.1;source_transcript_name=CD99-222;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711157.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711157.1;transcript_score=299.922;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711157.1,ENST00000711157.1;transcript_id=HG00140_ch_T0000278;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000278;transcript_name=HG00140_ch_T0000278;gene_name=CD99;ID=intron:HG00140_ch_T0000278:0;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2393739	2394915	.	+	.	source_transcript=ENST00000711157.1;source_transcript_name=CD99-222;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711157.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711157.1;transcript_score=299.922;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711157.1,ENST00000711157.1;transcript_id=HG00140_ch_T0000278;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000278;transcript_name=HG00140_ch_T0000278;gene_name=CD99;ID=exon:HG00140_ch_T0000278:1;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2370661	2371543	100	+	.	source_transcript=ENST00000711156.1;source_transcript_name=CD99-221;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711156.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711156.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711156.1,ENST00000711156.1;transcript_id=HG00140_ch_T0000279;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_G0000050;transcript_name=HG00140_ch_T0000279;gene_name=CD99;ID=HG00140_ch_T0000279;Name=CD99
HG00140_chrY	CAT	exon	2370661	2370727	.	+	.	source_transcript=ENST00000711156.1;source_transcript_name=CD99-221;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711156.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711156.1,ENST00000711156.1;transcript_id=HG00140_ch_T0000279;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000279;transcript_name=HG00140_ch_T0000279;gene_name=CD99;ID=exon:HG00140_ch_T0000279:0;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2370661	2370727	.	+	0	source_transcript=ENST00000711156.1;source_transcript_name=CD99-221;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711156.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711156.1,ENST00000711156.1;transcript_id=HG00140_ch_T0000279;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000279;transcript_name=HG00140_ch_T0000279;gene_name=CD99;ID=CDS:HG00140_ch_T0000279:0;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	2370661	2370663	.	+	0	source_transcript=ENST00000711156.1;source_transcript_name=CD99-221;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711156.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711156.1,ENST00000711156.1;transcript_id=HG00140_ch_T0000279;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000279;transcript_name=HG00140_ch_T0000279;gene_name=CD99;ID=start_codon:HG00140_ch_T0000279;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2370728	2371087	.	+	.	source_transcript=ENST00000711156.1;source_transcript_name=CD99-221;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711156.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711156.1,ENST00000711156.1;transcript_id=HG00140_ch_T0000279;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000279;transcript_name=HG00140_ch_T0000279;gene_name=CD99;ID=intron:HG00140_ch_T0000279:0;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2371088	2371543	.	+	.	source_transcript=ENST00000711156.1;source_transcript_name=CD99-221;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711156.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711156.1,ENST00000711156.1;transcript_id=HG00140_ch_T0000279;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000279;transcript_name=HG00140_ch_T0000279;gene_name=CD99;ID=exon:HG00140_ch_T0000279:1;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2371088	2371251	.	+	2	source_transcript=ENST00000711156.1;source_transcript_name=CD99-221;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711156.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711156.1,ENST00000711156.1;transcript_id=HG00140_ch_T0000279;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000279;transcript_name=HG00140_ch_T0000279;gene_name=CD99;ID=CDS:HG00140_ch_T0000279:1;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	2371249	2371251	.	+	0	source_transcript=ENST00000711156.1;source_transcript_name=CD99-221;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711156.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711156.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711156.1,ENST00000711156.1;transcript_id=HG00140_ch_T0000279;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000279;transcript_name=HG00140_ch_T0000279;gene_name=CD99;ID=stop_codon:HG00140_ch_T0000279;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2370661	2420130	1000	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00140_ch_T0000280;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_G0000050;transcript_name=HG00140_ch_T0000280;gene_name=CD99;ID=HG00140_ch_T0000280;Name=CD99
HG00140_chrY	CAT	exon	2370661	2370727	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00140_ch_T0000280;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000280;transcript_name=HG00140_ch_T0000280;gene_name=CD99;ID=exon:HG00140_ch_T0000280:0;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2370661	2370727	.	+	0	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00140_ch_T0000280;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000280;transcript_name=HG00140_ch_T0000280;gene_name=CD99;ID=CDS:HG00140_ch_T0000280:0;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	2370661	2370663	.	+	0	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00140_ch_T0000280;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000280;transcript_name=HG00140_ch_T0000280;gene_name=CD99;ID=start_codon:HG00140_ch_T0000280;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2370728	2393738	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00140_ch_T0000280;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000280;transcript_name=HG00140_ch_T0000280;gene_name=CD99;ID=intron:HG00140_ch_T0000280:0;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2393739	2393771	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00140_ch_T0000280;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000280;transcript_name=HG00140_ch_T0000280;gene_name=CD99;ID=exon:HG00140_ch_T0000280:1;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2393739	2393771	.	+	2	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00140_ch_T0000280;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000280;transcript_name=HG00140_ch_T0000280;gene_name=CD99;ID=CDS:HG00140_ch_T0000280:1;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2393772	2396923	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00140_ch_T0000280;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000280;transcript_name=HG00140_ch_T0000280;gene_name=CD99;ID=intron:HG00140_ch_T0000280:1;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2396924	2396971	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00140_ch_T0000280;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000280;transcript_name=HG00140_ch_T0000280;gene_name=CD99;ID=exon:HG00140_ch_T0000280:2;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2396924	2396971	.	+	2	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00140_ch_T0000280;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000280;transcript_name=HG00140_ch_T0000280;gene_name=CD99;ID=CDS:HG00140_ch_T0000280:2;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2396972	2398977	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00140_ch_T0000280;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000280;transcript_name=HG00140_ch_T0000280;gene_name=CD99;ID=intron:HG00140_ch_T0000280:2;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2398978	2399022	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00140_ch_T0000280;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000280;transcript_name=HG00140_ch_T0000280;gene_name=CD99;ID=exon:HG00140_ch_T0000280:3;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2398978	2399022	.	+	2	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00140_ch_T0000280;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000280;transcript_name=HG00140_ch_T0000280;gene_name=CD99;ID=CDS:HG00140_ch_T0000280:3;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2399023	2399672	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00140_ch_T0000280;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000280;transcript_name=HG00140_ch_T0000280;gene_name=CD99;ID=intron:HG00140_ch_T0000280:3;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2399673	2399741	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00140_ch_T0000280;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000280;transcript_name=HG00140_ch_T0000280;gene_name=CD99;ID=exon:HG00140_ch_T0000280:4;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2399673	2399741	.	+	2	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00140_ch_T0000280;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000280;transcript_name=HG00140_ch_T0000280;gene_name=CD99;ID=CDS:HG00140_ch_T0000280:4;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2399742	2401943	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00140_ch_T0000280;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000280;transcript_name=HG00140_ch_T0000280;gene_name=CD99;ID=intron:HG00140_ch_T0000280:4;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2401944	2401991	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00140_ch_T0000280;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000280;transcript_name=HG00140_ch_T0000280;gene_name=CD99;ID=exon:HG00140_ch_T0000280:5;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2401944	2401991	.	+	2	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00140_ch_T0000280;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000280;transcript_name=HG00140_ch_T0000280;gene_name=CD99;ID=CDS:HG00140_ch_T0000280:5;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2401992	2402630	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00140_ch_T0000280;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000280;transcript_name=HG00140_ch_T0000280;gene_name=CD99;ID=intron:HG00140_ch_T0000280:5;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2402631	2402681	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00140_ch_T0000280;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000280;transcript_name=HG00140_ch_T0000280;gene_name=CD99;ID=exon:HG00140_ch_T0000280:6;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2402631	2402681	.	+	2	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00140_ch_T0000280;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000280;transcript_name=HG00140_ch_T0000280;gene_name=CD99;ID=CDS:HG00140_ch_T0000280:6;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2402682	2405576	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00140_ch_T0000280;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000280;transcript_name=HG00140_ch_T0000280;gene_name=CD99;ID=intron:HG00140_ch_T0000280:6;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2405577	2405690	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00140_ch_T0000280;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000280;transcript_name=HG00140_ch_T0000280;gene_name=CD99;ID=exon:HG00140_ch_T0000280:7;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2405577	2405690	.	+	2	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00140_ch_T0000280;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000280;transcript_name=HG00140_ch_T0000280;gene_name=CD99;ID=CDS:HG00140_ch_T0000280:7;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2405691	2412688	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00140_ch_T0000280;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000280;transcript_name=HG00140_ch_T0000280;gene_name=CD99;ID=intron:HG00140_ch_T0000280:7;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2412689	2412706	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00140_ch_T0000280;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000280;transcript_name=HG00140_ch_T0000280;gene_name=CD99;ID=exon:HG00140_ch_T0000280:8;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2412689	2412696	.	+	2	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00140_ch_T0000280;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000280;transcript_name=HG00140_ch_T0000280;gene_name=CD99;ID=CDS:HG00140_ch_T0000280:8;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	2412694	2412696	.	+	0	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00140_ch_T0000280;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000280;transcript_name=HG00140_ch_T0000280;gene_name=CD99;ID=stop_codon:HG00140_ch_T0000280;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2412707	2417528	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00140_ch_T0000280;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000280;transcript_name=HG00140_ch_T0000280;gene_name=CD99;ID=intron:HG00140_ch_T0000280:8;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2417529	2417582	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00140_ch_T0000280;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000280;transcript_name=HG00140_ch_T0000280;gene_name=CD99;ID=exon:HG00140_ch_T0000280:9;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2417583	2420104	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00140_ch_T0000280;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000280;transcript_name=HG00140_ch_T0000280;gene_name=CD99;ID=intron:HG00140_ch_T0000280:9;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2420105	2420130	.	+	.	source_transcript=ENST00000711155.1;source_transcript_name=CD99-220;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711155.1;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711155.1,ENST00000711155.1;transcript_id=HG00140_ch_T0000280;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000280;transcript_name=HG00140_ch_T0000280;gene_name=CD99;ID=exon:HG00140_ch_T0000280:10;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2370800	2405690	1000	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=299.834;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=HG00140_ch_T0000281;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_G0000050;transcript_name=HG00140_ch_T0000281;gene_name=CD99;ID=HG00140_ch_T0000281;Name=CD99
HG00140_chrY	CAT	exon	2370800	2370995	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=HG00140_ch_T0000281;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000281;transcript_name=HG00140_ch_T0000281;gene_name=CD99;ID=exon:HG00140_ch_T0000281:0;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2370996	2393738	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=HG00140_ch_T0000281;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000281;transcript_name=HG00140_ch_T0000281;gene_name=CD99;ID=intron:HG00140_ch_T0000281:0;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2393739	2393771	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=HG00140_ch_T0000281;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000281;transcript_name=HG00140_ch_T0000281;gene_name=CD99;ID=exon:HG00140_ch_T0000281:1;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2393772	2396923	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=HG00140_ch_T0000281;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000281;transcript_name=HG00140_ch_T0000281;gene_name=CD99;ID=intron:HG00140_ch_T0000281:1;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2396924	2396971	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=HG00140_ch_T0000281;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000281;transcript_name=HG00140_ch_T0000281;gene_name=CD99;ID=exon:HG00140_ch_T0000281:2;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2396972	2398977	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=HG00140_ch_T0000281;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000281;transcript_name=HG00140_ch_T0000281;gene_name=CD99;ID=intron:HG00140_ch_T0000281:2;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2398978	2399022	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=HG00140_ch_T0000281;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000281;transcript_name=HG00140_ch_T0000281;gene_name=CD99;ID=exon:HG00140_ch_T0000281:3;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2399023	2399672	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=HG00140_ch_T0000281;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000281;transcript_name=HG00140_ch_T0000281;gene_name=CD99;ID=intron:HG00140_ch_T0000281:3;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2399673	2399741	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=HG00140_ch_T0000281;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000281;transcript_name=HG00140_ch_T0000281;gene_name=CD99;ID=exon:HG00140_ch_T0000281:4;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2399742	2401943	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=HG00140_ch_T0000281;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000281;transcript_name=HG00140_ch_T0000281;gene_name=CD99;ID=intron:HG00140_ch_T0000281:4;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2401944	2401991	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=HG00140_ch_T0000281;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000281;transcript_name=HG00140_ch_T0000281;gene_name=CD99;ID=exon:HG00140_ch_T0000281:5;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2401992	2402630	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=HG00140_ch_T0000281;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000281;transcript_name=HG00140_ch_T0000281;gene_name=CD99;ID=intron:HG00140_ch_T0000281:5;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2402631	2402681	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=HG00140_ch_T0000281;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000281;transcript_name=HG00140_ch_T0000281;gene_name=CD99;ID=exon:HG00140_ch_T0000281:6;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2402682	2405576	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=HG00140_ch_T0000281;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000281;transcript_name=HG00140_ch_T0000281;gene_name=CD99;ID=intron:HG00140_ch_T0000281:6;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2405577	2405690	.	+	.	source_transcript=ENST00000711154.1;source_transcript_name=CD99-219;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711154.1;transcript_score=299.834;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711154.1,ENST00000711154.1;transcript_id=HG00140_ch_T0000281;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000281;transcript_name=HG00140_ch_T0000281;gene_name=CD99;ID=exon:HG00140_ch_T0000281:7;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2396693	2405680	1000	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=HG00140_ch_T0000282;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_G0000050;transcript_name=HG00140_ch_T0000282;gene_name=CD99;ID=HG00140_ch_T0000282;Name=CD99
HG00140_chrY	CAT	exon	2396693	2396793	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=HG00140_ch_T0000282;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000282;transcript_name=HG00140_ch_T0000282;gene_name=CD99;ID=exon:HG00140_ch_T0000282:0;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2396794	2396923	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=HG00140_ch_T0000282;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000282;transcript_name=HG00140_ch_T0000282;gene_name=CD99;ID=intron:HG00140_ch_T0000282:0;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2396924	2396971	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=HG00140_ch_T0000282;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000282;transcript_name=HG00140_ch_T0000282;gene_name=CD99;ID=exon:HG00140_ch_T0000282:1;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2396972	2398977	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=HG00140_ch_T0000282;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000282;transcript_name=HG00140_ch_T0000282;gene_name=CD99;ID=intron:HG00140_ch_T0000282:1;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2398978	2399022	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=HG00140_ch_T0000282;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000282;transcript_name=HG00140_ch_T0000282;gene_name=CD99;ID=exon:HG00140_ch_T0000282:2;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2399023	2399672	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=HG00140_ch_T0000282;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000282;transcript_name=HG00140_ch_T0000282;gene_name=CD99;ID=intron:HG00140_ch_T0000282:2;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2399673	2399741	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=HG00140_ch_T0000282;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000282;transcript_name=HG00140_ch_T0000282;gene_name=CD99;ID=exon:HG00140_ch_T0000282:3;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2399742	2401943	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=HG00140_ch_T0000282;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000282;transcript_name=HG00140_ch_T0000282;gene_name=CD99;ID=intron:HG00140_ch_T0000282:3;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2401944	2401991	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=HG00140_ch_T0000282;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000282;transcript_name=HG00140_ch_T0000282;gene_name=CD99;ID=exon:HG00140_ch_T0000282:4;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2401992	2402630	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=HG00140_ch_T0000282;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000282;transcript_name=HG00140_ch_T0000282;gene_name=CD99;ID=intron:HG00140_ch_T0000282:4;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2402631	2402681	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=HG00140_ch_T0000282;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000282;transcript_name=HG00140_ch_T0000282;gene_name=CD99;ID=exon:HG00140_ch_T0000282:5;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2402682	2405576	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=HG00140_ch_T0000282;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000282;transcript_name=HG00140_ch_T0000282;gene_name=CD99;ID=intron:HG00140_ch_T0000282:5;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2405577	2405680	.	+	.	source_transcript=ENST00000711153.1;source_transcript_name=CD99-218;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711153.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711153.1;transcript_score=299.78499999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711153.1,ENST00000711153.1;transcript_id=HG00140_ch_T0000282;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000282;transcript_name=HG00140_ch_T0000282;gene_name=CD99;ID=exon:HG00140_ch_T0000282:6;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2398384	2405585	1000	+	.	source_transcript=ENST00000711152.1;source_transcript_name=CD99-217;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711152.1;transcript_score=299.877;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711152.1,ENST00000711152.1;transcript_id=HG00140_ch_T0000283;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_G0000050;transcript_name=HG00140_ch_T0000283;gene_name=CD99;ID=HG00140_ch_T0000283;Name=CD99
HG00140_chrY	CAT	exon	2398384	2399022	.	+	.	source_transcript=ENST00000711152.1;source_transcript_name=CD99-217;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711152.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711152.1,ENST00000711152.1;transcript_id=HG00140_ch_T0000283;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000283;transcript_name=HG00140_ch_T0000283;gene_name=CD99;ID=exon:HG00140_ch_T0000283:0;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2399023	2399672	.	+	.	source_transcript=ENST00000711152.1;source_transcript_name=CD99-217;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711152.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711152.1,ENST00000711152.1;transcript_id=HG00140_ch_T0000283;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000283;transcript_name=HG00140_ch_T0000283;gene_name=CD99;ID=intron:HG00140_ch_T0000283:0;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2399673	2399741	.	+	.	source_transcript=ENST00000711152.1;source_transcript_name=CD99-217;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711152.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711152.1,ENST00000711152.1;transcript_id=HG00140_ch_T0000283;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000283;transcript_name=HG00140_ch_T0000283;gene_name=CD99;ID=exon:HG00140_ch_T0000283:1;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2399742	2401943	.	+	.	source_transcript=ENST00000711152.1;source_transcript_name=CD99-217;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711152.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711152.1,ENST00000711152.1;transcript_id=HG00140_ch_T0000283;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000283;transcript_name=HG00140_ch_T0000283;gene_name=CD99;ID=intron:HG00140_ch_T0000283:1;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2401944	2401991	.	+	.	source_transcript=ENST00000711152.1;source_transcript_name=CD99-217;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711152.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711152.1,ENST00000711152.1;transcript_id=HG00140_ch_T0000283;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000283;transcript_name=HG00140_ch_T0000283;gene_name=CD99;ID=exon:HG00140_ch_T0000283:2;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2401992	2402630	.	+	.	source_transcript=ENST00000711152.1;source_transcript_name=CD99-217;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711152.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711152.1,ENST00000711152.1;transcript_id=HG00140_ch_T0000283;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000283;transcript_name=HG00140_ch_T0000283;gene_name=CD99;ID=intron:HG00140_ch_T0000283:2;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2402631	2402681	.	+	.	source_transcript=ENST00000711152.1;source_transcript_name=CD99-217;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711152.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711152.1,ENST00000711152.1;transcript_id=HG00140_ch_T0000283;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000283;transcript_name=HG00140_ch_T0000283;gene_name=CD99;ID=exon:HG00140_ch_T0000283:3;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2402682	2405576	.	+	.	source_transcript=ENST00000711152.1;source_transcript_name=CD99-217;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711152.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711152.1,ENST00000711152.1;transcript_id=HG00140_ch_T0000283;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000283;transcript_name=HG00140_ch_T0000283;gene_name=CD99;ID=intron:HG00140_ch_T0000283:3;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2405577	2405585	.	+	.	source_transcript=ENST00000711152.1;source_transcript_name=CD99-217;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711152.1;transcript_score=299.877;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711152.1,ENST00000711152.1;transcript_id=HG00140_ch_T0000283;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000283;transcript_name=HG00140_ch_T0000283;gene_name=CD99;ID=exon:HG00140_ch_T0000283:4;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2405658	2420451	1000	+	.	source_transcript=ENST00000711151.1;source_transcript_name=CD99-216;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711151.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711151.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711151.1,ENST00000711151.1;transcript_id=HG00140_ch_T0000284;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_G0000050;transcript_name=HG00140_ch_T0000284;gene_name=CD99;ID=HG00140_ch_T0000284;Name=CD99
HG00140_chrY	CAT	exon	2405658	2405690	.	+	.	source_transcript=ENST00000711151.1;source_transcript_name=CD99-216;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711151.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711151.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711151.1,ENST00000711151.1;transcript_id=HG00140_ch_T0000284;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000284;transcript_name=HG00140_ch_T0000284;gene_name=CD99;ID=exon:HG00140_ch_T0000284:0;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2405658	2405690	.	+	2	source_transcript=ENST00000711151.1;source_transcript_name=CD99-216;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711151.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711151.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711151.1,ENST00000711151.1;transcript_id=HG00140_ch_T0000284;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000284;transcript_name=HG00140_ch_T0000284;gene_name=CD99;ID=CDS:HG00140_ch_T0000284:0;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2405691	2417206	.	+	.	source_transcript=ENST00000711151.1;source_transcript_name=CD99-216;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711151.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711151.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711151.1,ENST00000711151.1;transcript_id=HG00140_ch_T0000284;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000284;transcript_name=HG00140_ch_T0000284;gene_name=CD99;ID=intron:HG00140_ch_T0000284:0;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2417207	2417582	.	+	.	source_transcript=ENST00000711151.1;source_transcript_name=CD99-216;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711151.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711151.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711151.1,ENST00000711151.1;transcript_id=HG00140_ch_T0000284;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000284;transcript_name=HG00140_ch_T0000284;gene_name=CD99;ID=exon:HG00140_ch_T0000284:1;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2417207	2417241	.	+	2	source_transcript=ENST00000711151.1;source_transcript_name=CD99-216;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711151.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711151.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711151.1,ENST00000711151.1;transcript_id=HG00140_ch_T0000284;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000284;transcript_name=HG00140_ch_T0000284;gene_name=CD99;ID=CDS:HG00140_ch_T0000284:1;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	2417239	2417241	.	+	0	source_transcript=ENST00000711151.1;source_transcript_name=CD99-216;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711151.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711151.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711151.1,ENST00000711151.1;transcript_id=HG00140_ch_T0000284;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000284;transcript_name=HG00140_ch_T0000284;gene_name=CD99;ID=stop_codon:HG00140_ch_T0000284;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2417583	2420104	.	+	.	source_transcript=ENST00000711151.1;source_transcript_name=CD99-216;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711151.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711151.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711151.1,ENST00000711151.1;transcript_id=HG00140_ch_T0000284;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000284;transcript_name=HG00140_ch_T0000284;gene_name=CD99;ID=intron:HG00140_ch_T0000284:1;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2420105	2420451	.	+	.	source_transcript=ENST00000711151.1;source_transcript_name=CD99-216;source_gene=ENSG00000292348.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292348.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711151.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711151.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=ENST00000711151.1,ENST00000711151.1;transcript_id=HG00140_ch_T0000284;gene_id=HG00140_ch_G0000050;Parent=HG00140_ch_T0000284;transcript_name=HG00140_ch_T0000284;gene_name=CD99;ID=exon:HG00140_ch_T0000284:2;Name=CD99;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	2431415	2534022	.	+	.	source_gene_common_name=XGY2;source_gene=ENSG00000290840.2;gene_id=HG00140_ch_G0000051;gene_biotype=lncRNA;gene_name=XGY2;gene_sources=liftoff;ID=HG00140_ch_G0000051;Name=XGY2
HG00140_chrY	CAT	transcript	2431415	2470301	1000	+	.	source_transcript=ENST00000680285.1;source_transcript_name=XGY2-204;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680285.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000285;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_G0000051;transcript_name=HG00140_ch_T0000285;gene_name=XGY2;ID=HG00140_ch_T0000285;Name=XGY2
HG00140_chrY	CAT	exon	2431415	2431667	.	+	.	source_transcript=ENST00000680285.1;source_transcript_name=XGY2-204;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680285.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000285;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000285;transcript_name=HG00140_ch_T0000285;gene_name=XGY2;ID=exon:HG00140_ch_T0000285:0;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2431668	2449888	.	+	.	source_transcript=ENST00000680285.1;source_transcript_name=XGY2-204;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680285.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000285;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000285;transcript_name=HG00140_ch_T0000285;gene_name=XGY2;ID=intron:HG00140_ch_T0000285:0;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2449889	2449930	.	+	.	source_transcript=ENST00000680285.1;source_transcript_name=XGY2-204;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680285.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000285;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000285;transcript_name=HG00140_ch_T0000285;gene_name=XGY2;ID=exon:HG00140_ch_T0000285:1;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2449931	2454108	.	+	.	source_transcript=ENST00000680285.1;source_transcript_name=XGY2-204;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680285.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000285;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000285;transcript_name=HG00140_ch_T0000285;gene_name=XGY2;ID=intron:HG00140_ch_T0000285:1;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2454109	2454132	.	+	.	source_transcript=ENST00000680285.1;source_transcript_name=XGY2-204;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680285.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000285;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000285;transcript_name=HG00140_ch_T0000285;gene_name=XGY2;ID=exon:HG00140_ch_T0000285:2;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2454133	2469128	.	+	.	source_transcript=ENST00000680285.1;source_transcript_name=XGY2-204;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680285.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000285;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000285;transcript_name=HG00140_ch_T0000285;gene_name=XGY2;ID=intron:HG00140_ch_T0000285:2;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2469129	2470301	.	+	.	source_transcript=ENST00000680285.1;source_transcript_name=XGY2-204;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680285.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000285;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000285;transcript_name=HG00140_ch_T0000285;gene_name=XGY2;ID=exon:HG00140_ch_T0000285:3;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2431628	2454389	1000	+	.	source_transcript=ENST00000680009.1;source_transcript_name=XGY2-203;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680009.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680009.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000286;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_G0000051;transcript_name=HG00140_ch_T0000286;gene_name=XGY2;ID=HG00140_ch_T0000286;Name=XGY2
HG00140_chrY	CAT	exon	2431628	2431667	.	+	.	source_transcript=ENST00000680009.1;source_transcript_name=XGY2-203;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680009.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680009.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000286;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000286;transcript_name=HG00140_ch_T0000286;gene_name=XGY2;ID=exon:HG00140_ch_T0000286:0;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2431668	2449888	.	+	.	source_transcript=ENST00000680009.1;source_transcript_name=XGY2-203;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680009.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680009.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000286;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000286;transcript_name=HG00140_ch_T0000286;gene_name=XGY2;ID=intron:HG00140_ch_T0000286:0;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2449889	2449930	.	+	.	source_transcript=ENST00000680009.1;source_transcript_name=XGY2-203;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680009.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680009.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000286;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000286;transcript_name=HG00140_ch_T0000286;gene_name=XGY2;ID=exon:HG00140_ch_T0000286:1;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2449931	2454108	.	+	.	source_transcript=ENST00000680009.1;source_transcript_name=XGY2-203;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680009.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680009.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000286;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000286;transcript_name=HG00140_ch_T0000286;gene_name=XGY2;ID=intron:HG00140_ch_T0000286:1;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2454109	2454389	.	+	.	source_transcript=ENST00000680009.1;source_transcript_name=XGY2-203;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680009.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680009.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000286;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000286;transcript_name=HG00140_ch_T0000286;gene_name=XGY2;ID=exon:HG00140_ch_T0000286:2;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2431628	2534022	1000	+	.	source_transcript=ENST00000681940.1;source_transcript_name=XGY2-207;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681940.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681940.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000287;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_G0000051;transcript_name=HG00140_ch_T0000287;gene_name=XGY2;ID=HG00140_ch_T0000287;Name=XGY2
HG00140_chrY	CAT	exon	2431628	2431667	.	+	.	source_transcript=ENST00000681940.1;source_transcript_name=XGY2-207;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681940.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681940.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000287;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000287;transcript_name=HG00140_ch_T0000287;gene_name=XGY2;ID=exon:HG00140_ch_T0000287:0;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2431668	2449888	.	+	.	source_transcript=ENST00000681940.1;source_transcript_name=XGY2-207;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681940.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681940.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000287;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000287;transcript_name=HG00140_ch_T0000287;gene_name=XGY2;ID=intron:HG00140_ch_T0000287:0;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2449889	2449930	.	+	.	source_transcript=ENST00000681940.1;source_transcript_name=XGY2-207;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681940.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681940.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000287;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000287;transcript_name=HG00140_ch_T0000287;gene_name=XGY2;ID=exon:HG00140_ch_T0000287:1;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2449931	2454108	.	+	.	source_transcript=ENST00000681940.1;source_transcript_name=XGY2-207;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681940.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681940.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000287;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000287;transcript_name=HG00140_ch_T0000287;gene_name=XGY2;ID=intron:HG00140_ch_T0000287:1;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2454109	2454132	.	+	.	source_transcript=ENST00000681940.1;source_transcript_name=XGY2-207;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681940.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681940.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000287;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000287;transcript_name=HG00140_ch_T0000287;gene_name=XGY2;ID=exon:HG00140_ch_T0000287:2;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2454133	2525025	.	+	.	source_transcript=ENST00000681940.1;source_transcript_name=XGY2-207;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681940.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681940.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000287;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000287;transcript_name=HG00140_ch_T0000287;gene_name=XGY2;ID=intron:HG00140_ch_T0000287:2;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2525026	2525123	.	+	.	source_transcript=ENST00000681940.1;source_transcript_name=XGY2-207;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681940.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681940.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000287;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000287;transcript_name=HG00140_ch_T0000287;gene_name=XGY2;ID=exon:HG00140_ch_T0000287:3;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2525124	2533980	.	+	.	source_transcript=ENST00000681940.1;source_transcript_name=XGY2-207;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681940.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681940.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000287;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000287;transcript_name=HG00140_ch_T0000287;gene_name=XGY2;ID=intron:HG00140_ch_T0000287:3;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2533981	2534022	.	+	.	source_transcript=ENST00000681940.1;source_transcript_name=XGY2-207;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681940.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681940.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000287;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000287;transcript_name=HG00140_ch_T0000287;gene_name=XGY2;ID=exon:HG00140_ch_T0000287:4;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2431628	2525069	1000	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000288;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_G0000051;transcript_name=HG00140_ch_T0000288;gene_name=XGY2;ID=HG00140_ch_T0000288;Name=XGY2
HG00140_chrY	CAT	exon	2431628	2431667	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000288;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000288;transcript_name=HG00140_ch_T0000288;gene_name=XGY2;ID=exon:HG00140_ch_T0000288:0;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2431668	2449888	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000288;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000288;transcript_name=HG00140_ch_T0000288;gene_name=XGY2;ID=intron:HG00140_ch_T0000288:0;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2449889	2449930	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000288;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000288;transcript_name=HG00140_ch_T0000288;gene_name=XGY2;ID=exon:HG00140_ch_T0000288:1;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2449931	2454108	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000288;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000288;transcript_name=HG00140_ch_T0000288;gene_name=XGY2;ID=intron:HG00140_ch_T0000288:1;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2454109	2454132	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000288;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000288;transcript_name=HG00140_ch_T0000288;gene_name=XGY2;ID=exon:HG00140_ch_T0000288:2;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2454133	2520407	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000288;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000288;transcript_name=HG00140_ch_T0000288;gene_name=XGY2;ID=intron:HG00140_ch_T0000288:2;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2520408	2520463	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000288;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000288;transcript_name=HG00140_ch_T0000288;gene_name=XGY2;ID=exon:HG00140_ch_T0000288:3;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2520464	2520865	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000288;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000288;transcript_name=HG00140_ch_T0000288;gene_name=XGY2;ID=intron:HG00140_ch_T0000288:3;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2520866	2521007	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000288;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000288;transcript_name=HG00140_ch_T0000288;gene_name=XGY2;ID=exon:HG00140_ch_T0000288:4;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2521008	2521544	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000288;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000288;transcript_name=HG00140_ch_T0000288;gene_name=XGY2;ID=intron:HG00140_ch_T0000288:4;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2521545	2521622	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000288;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000288;transcript_name=HG00140_ch_T0000288;gene_name=XGY2;ID=exon:HG00140_ch_T0000288:5;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2521623	2523456	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000288;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000288;transcript_name=HG00140_ch_T0000288;gene_name=XGY2;ID=intron:HG00140_ch_T0000288:5;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2523457	2523637	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000288;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000288;transcript_name=HG00140_ch_T0000288;gene_name=XGY2;ID=exon:HG00140_ch_T0000288:6;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2523638	2525025	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000288;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000288;transcript_name=HG00140_ch_T0000288;gene_name=XGY2;ID=intron:HG00140_ch_T0000288:6;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2525026	2525069	.	+	.	source_transcript=ENST00000681787.1;source_transcript_name=XGY2-206;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000681787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000681787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000288;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000288;transcript_name=HG00140_ch_T0000288;gene_name=XGY2;ID=exon:HG00140_ch_T0000288:7;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2431628	2525069	1000	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000289;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_G0000051;transcript_name=HG00140_ch_T0000289;gene_name=XGY2;ID=HG00140_ch_T0000289;Name=XGY2
HG00140_chrY	CAT	exon	2431628	2431667	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000289;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000289;transcript_name=HG00140_ch_T0000289;gene_name=XGY2;ID=exon:HG00140_ch_T0000289:0;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2431668	2449888	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000289;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000289;transcript_name=HG00140_ch_T0000289;gene_name=XGY2;ID=intron:HG00140_ch_T0000289:0;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2449889	2449930	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000289;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000289;transcript_name=HG00140_ch_T0000289;gene_name=XGY2;ID=exon:HG00140_ch_T0000289:1;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2449931	2454108	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000289;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000289;transcript_name=HG00140_ch_T0000289;gene_name=XGY2;ID=intron:HG00140_ch_T0000289:1;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2454109	2454132	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000289;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000289;transcript_name=HG00140_ch_T0000289;gene_name=XGY2;ID=exon:HG00140_ch_T0000289:2;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2454133	2520865	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000289;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000289;transcript_name=HG00140_ch_T0000289;gene_name=XGY2;ID=intron:HG00140_ch_T0000289:2;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2520866	2521007	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000289;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000289;transcript_name=HG00140_ch_T0000289;gene_name=XGY2;ID=exon:HG00140_ch_T0000289:3;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2521008	2521544	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000289;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000289;transcript_name=HG00140_ch_T0000289;gene_name=XGY2;ID=intron:HG00140_ch_T0000289:3;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2521545	2521622	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000289;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000289;transcript_name=HG00140_ch_T0000289;gene_name=XGY2;ID=exon:HG00140_ch_T0000289:4;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2521623	2523456	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000289;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000289;transcript_name=HG00140_ch_T0000289;gene_name=XGY2;ID=intron:HG00140_ch_T0000289:4;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2523457	2523637	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000289;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000289;transcript_name=HG00140_ch_T0000289;gene_name=XGY2;ID=exon:HG00140_ch_T0000289:5;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2523638	2525025	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000289;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000289;transcript_name=HG00140_ch_T0000289;gene_name=XGY2;ID=intron:HG00140_ch_T0000289:5;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2525026	2525069	.	+	.	source_transcript=ENST00000679518.1;source_transcript_name=XGY2-201;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000289;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000289;transcript_name=HG00140_ch_T0000289;gene_name=XGY2;ID=exon:HG00140_ch_T0000289:6;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2431628	2467014	1000	+	.	source_transcript=ENST00000680845.1;source_transcript_name=XGY2-205;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680845.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000290;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_G0000051;transcript_name=HG00140_ch_T0000290;gene_name=XGY2;ID=HG00140_ch_T0000290;Name=XGY2
HG00140_chrY	CAT	exon	2431628	2431667	.	+	.	source_transcript=ENST00000680845.1;source_transcript_name=XGY2-205;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000290;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000290;transcript_name=HG00140_ch_T0000290;gene_name=XGY2;ID=exon:HG00140_ch_T0000290:0;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2431668	2449888	.	+	.	source_transcript=ENST00000680845.1;source_transcript_name=XGY2-205;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000290;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000290;transcript_name=HG00140_ch_T0000290;gene_name=XGY2;ID=intron:HG00140_ch_T0000290:0;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2449889	2449930	.	+	.	source_transcript=ENST00000680845.1;source_transcript_name=XGY2-205;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000290;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000290;transcript_name=HG00140_ch_T0000290;gene_name=XGY2;ID=exon:HG00140_ch_T0000290:1;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2449931	2454108	.	+	.	source_transcript=ENST00000680845.1;source_transcript_name=XGY2-205;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000290;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000290;transcript_name=HG00140_ch_T0000290;gene_name=XGY2;ID=intron:HG00140_ch_T0000290:1;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2454109	2454132	.	+	.	source_transcript=ENST00000680845.1;source_transcript_name=XGY2-205;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000290;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000290;transcript_name=HG00140_ch_T0000290;gene_name=XGY2;ID=exon:HG00140_ch_T0000290:2;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2454133	2466374	.	+	.	source_transcript=ENST00000680845.1;source_transcript_name=XGY2-205;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000290;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000290;transcript_name=HG00140_ch_T0000290;gene_name=XGY2;ID=intron:HG00140_ch_T0000290:2;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2466375	2466433	.	+	.	source_transcript=ENST00000680845.1;source_transcript_name=XGY2-205;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000290;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000290;transcript_name=HG00140_ch_T0000290;gene_name=XGY2;ID=exon:HG00140_ch_T0000290:3;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2466434	2466859	.	+	.	source_transcript=ENST00000680845.1;source_transcript_name=XGY2-205;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000290;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000290;transcript_name=HG00140_ch_T0000290;gene_name=XGY2;ID=intron:HG00140_ch_T0000290:3;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2466860	2467014	.	+	.	source_transcript=ENST00000680845.1;source_transcript_name=XGY2-205;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000680845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000680845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000290;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000290;transcript_name=HG00140_ch_T0000290;gene_name=XGY2;ID=exon:HG00140_ch_T0000290:4;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2431628	2466950	1000	+	.	source_transcript=ENST00000679825.1;source_transcript_name=XGY2-202;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679825.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000291;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_G0000051;transcript_name=HG00140_ch_T0000291;gene_name=XGY2;ID=HG00140_ch_T0000291;Name=XGY2
HG00140_chrY	CAT	exon	2431628	2431667	.	+	.	source_transcript=ENST00000679825.1;source_transcript_name=XGY2-202;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679825.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000291;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000291;transcript_name=HG00140_ch_T0000291;gene_name=XGY2;ID=exon:HG00140_ch_T0000291:0;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2431668	2449888	.	+	.	source_transcript=ENST00000679825.1;source_transcript_name=XGY2-202;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679825.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000291;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000291;transcript_name=HG00140_ch_T0000291;gene_name=XGY2;ID=intron:HG00140_ch_T0000291:0;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2449889	2449930	.	+	.	source_transcript=ENST00000679825.1;source_transcript_name=XGY2-202;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679825.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000291;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000291;transcript_name=HG00140_ch_T0000291;gene_name=XGY2;ID=exon:HG00140_ch_T0000291:1;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2449931	2454108	.	+	.	source_transcript=ENST00000679825.1;source_transcript_name=XGY2-202;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679825.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000291;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000291;transcript_name=HG00140_ch_T0000291;gene_name=XGY2;ID=intron:HG00140_ch_T0000291:1;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2454109	2454132	.	+	.	source_transcript=ENST00000679825.1;source_transcript_name=XGY2-202;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679825.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000291;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000291;transcript_name=HG00140_ch_T0000291;gene_name=XGY2;ID=exon:HG00140_ch_T0000291:2;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2454133	2466374	.	+	.	source_transcript=ENST00000679825.1;source_transcript_name=XGY2-202;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679825.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000291;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000291;transcript_name=HG00140_ch_T0000291;gene_name=XGY2;ID=intron:HG00140_ch_T0000291:2;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2466375	2466950	.	+	.	source_transcript=ENST00000679825.1;source_transcript_name=XGY2-202;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000679825.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000679825.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000291;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000291;transcript_name=HG00140_ch_T0000291;gene_name=XGY2;ID=exon:HG00140_ch_T0000291:3;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2466375	2470142	1000	+	.	source_transcript=ENST00000819779.1;source_transcript_name=XGY2-208;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000819779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000819779.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000295;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_G0000051;transcript_name=HG00140_ch_T0000295;gene_name=XGY2;ID=HG00140_ch_T0000295;Name=XGY2
HG00140_chrY	CAT	exon	2466375	2466433	.	+	.	source_transcript=ENST00000819779.1;source_transcript_name=XGY2-208;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000819779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000819779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000295;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000295;transcript_name=HG00140_ch_T0000295;gene_name=XGY2;ID=exon:HG00140_ch_T0000295:0;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2466434	2469128	.	+	.	source_transcript=ENST00000819779.1;source_transcript_name=XGY2-208;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000819779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000819779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000295;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000295;transcript_name=HG00140_ch_T0000295;gene_name=XGY2;ID=intron:HG00140_ch_T0000295:0;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2469129	2470142	.	+	.	source_transcript=ENST00000819779.1;source_transcript_name=XGY2-208;source_gene=ENSG00000290840.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290840.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000819779.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000819779.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;transcript_id=HG00140_ch_T0000295;gene_id=HG00140_ch_G0000051;Parent=HG00140_ch_T0000295;transcript_name=HG00140_ch_T0000295;gene_name=XGY2;ID=exon:HG00140_ch_T0000295:1;Name=XGY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	2431628	2454132	.	+	.	source_gene_common_name=ENSG00000288686;source_gene=ENSG00000288686.1;gene_id=HG00140_ch_G0000052;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000288686;gene_sources=liftoff;ID=HG00140_ch_G0000052;Name=ENSG00000288686
HG00140_chrY	CAT	transcript	2431628	2454132	1000	+	.	source_transcript=ENST00000683447.1;source_transcript_name=ENST00000683447;source_gene=ENSG00000288686.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000288686.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000683447.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000683447.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288686;transcript_id=HG00140_ch_T0000292;gene_id=HG00140_ch_G0000052;Parent=HG00140_ch_G0000052;transcript_name=HG00140_ch_T0000292;gene_name=ENSG00000288686;ID=HG00140_ch_T0000292;Name=ENSG00000288686
HG00140_chrY	CAT	exon	2431628	2431667	.	+	.	source_transcript=ENST00000683447.1;source_transcript_name=ENST00000683447;source_gene=ENSG00000288686.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000288686.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000683447.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000683447.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288686;transcript_id=HG00140_ch_T0000292;gene_id=HG00140_ch_G0000052;Parent=HG00140_ch_T0000292;transcript_name=HG00140_ch_T0000292;gene_name=ENSG00000288686;ID=exon:HG00140_ch_T0000292:0;Name=ENSG00000288686;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2431668	2449888	.	+	.	source_transcript=ENST00000683447.1;source_transcript_name=ENST00000683447;source_gene=ENSG00000288686.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000288686.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000683447.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000683447.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288686;transcript_id=HG00140_ch_T0000292;gene_id=HG00140_ch_G0000052;Parent=HG00140_ch_T0000292;transcript_name=HG00140_ch_T0000292;gene_name=ENSG00000288686;ID=intron:HG00140_ch_T0000292:0;Name=ENSG00000288686;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2449889	2449930	.	+	.	source_transcript=ENST00000683447.1;source_transcript_name=ENST00000683447;source_gene=ENSG00000288686.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000288686.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000683447.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000683447.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288686;transcript_id=HG00140_ch_T0000292;gene_id=HG00140_ch_G0000052;Parent=HG00140_ch_T0000292;transcript_name=HG00140_ch_T0000292;gene_name=ENSG00000288686;ID=exon:HG00140_ch_T0000292:1;Name=ENSG00000288686;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2449931	2454108	.	+	.	source_transcript=ENST00000683447.1;source_transcript_name=ENST00000683447;source_gene=ENSG00000288686.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000288686.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000683447.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000683447.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288686;transcript_id=HG00140_ch_T0000292;gene_id=HG00140_ch_G0000052;Parent=HG00140_ch_T0000292;transcript_name=HG00140_ch_T0000292;gene_name=ENSG00000288686;ID=intron:HG00140_ch_T0000292:1;Name=ENSG00000288686;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2454109	2454132	.	+	.	source_transcript=ENST00000683447.1;source_transcript_name=ENST00000683447;source_gene=ENSG00000288686.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000288686.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000683447.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000683447.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288686;transcript_id=HG00140_ch_T0000292;gene_id=HG00140_ch_G0000052;Parent=HG00140_ch_T0000292;transcript_name=HG00140_ch_T0000292;gene_name=ENSG00000288686;ID=exon:HG00140_ch_T0000292:2;Name=ENSG00000288686;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	2464129	2464233	.	+	.	source_gene_common_name=RNU6-1334P;source_gene=ENSG00000251841.1;alternative_source_transcripts=ENST00000516032.1,ENST00000516032.1;gene_id=HG00140_ch_G0000053;gene_biotype=snRNA;gene_name=RNU6-1334P;gene_sources=liftoff;ID=HG00140_ch_G0000053;Name=RNU6-1334P
HG00140_chrY	CAT	transcript	2464129	2464233	1000	+	.	source_transcript=ENST00000516032.1;source_transcript_name=RNU6-1334P-201;source_gene=ENSG00000251841.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000251841.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516032.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-1334P;alternative_source_transcripts=ENST00000516032.1,ENST00000516032.1;transcript_id=HG00140_ch_T0000293;gene_id=HG00140_ch_G0000053;Parent=HG00140_ch_G0000053;transcript_name=HG00140_ch_T0000293;gene_name=RNU6-1334P;ID=HG00140_ch_T0000293;Name=RNU6-1334P
HG00140_chrY	CAT	exon	2464129	2464233	.	+	.	source_transcript=ENST00000516032.1;source_transcript_name=RNU6-1334P-201;source_gene=ENSG00000251841.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000251841.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516032.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-1334P;alternative_source_transcripts=ENST00000516032.1,ENST00000516032.1;transcript_id=HG00140_ch_T0000293;gene_id=HG00140_ch_G0000053;Parent=HG00140_ch_T0000293;transcript_name=HG00140_ch_T0000293;gene_name=RNU6-1334P;ID=exon:HG00140_ch_T0000293:0;Name=RNU6-1334P;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	2466235	2467062	.	-	.	source_gene_common_name=SRY;source_gene=ENSG00000184895.8;alternative_source_transcripts=ENST00000383070.2,ENST00000383070.2;gene_id=HG00140_ch_G0000054;gene_biotype=protein_coding;gene_name=SRY;gene_sources=liftoff;ID=HG00140_ch_G0000054;Name=SRY
HG00140_chrY	CAT	transcript	2466235	2467062	100	-	.	source_transcript=ENST00000383070.2;source_transcript_name=SRY-201;source_gene=ENSG00000184895.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000184895.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383070.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000383070.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=ENST00000383070.2,ENST00000383070.2;transcript_id=HG00140_ch_T0000294;gene_id=HG00140_ch_G0000054;Parent=HG00140_ch_G0000054;transcript_name=HG00140_ch_T0000294;gene_name=SRY;ID=HG00140_ch_T0000294;Name=SRY
HG00140_chrY	CAT	exon	2466235	2467062	.	-	.	source_transcript=ENST00000383070.2;source_transcript_name=SRY-201;source_gene=ENSG00000184895.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000184895.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383070.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000383070.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=ENST00000383070.2,ENST00000383070.2;transcript_id=HG00140_ch_T0000294;gene_id=HG00140_ch_G0000054;Parent=HG00140_ch_T0000294;transcript_name=HG00140_ch_T0000294;gene_name=SRY;ID=exon:HG00140_ch_T0000294:0;Name=SRY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2466369	2466983	.	-	0	source_transcript=ENST00000383070.2;source_transcript_name=SRY-201;source_gene=ENSG00000184895.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000184895.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383070.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000383070.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=ENST00000383070.2,ENST00000383070.2;transcript_id=HG00140_ch_T0000294;gene_id=HG00140_ch_G0000054;Parent=HG00140_ch_T0000294;transcript_name=HG00140_ch_T0000294;gene_name=SRY;ID=CDS:HG00140_ch_T0000294:0;Name=SRY;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	2466369	2466371	.	-	0	source_transcript=ENST00000383070.2;source_transcript_name=SRY-201;source_gene=ENSG00000184895.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000184895.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383070.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000383070.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=ENST00000383070.2,ENST00000383070.2;transcript_id=HG00140_ch_T0000294;gene_id=HG00140_ch_G0000054;Parent=HG00140_ch_T0000294;transcript_name=HG00140_ch_T0000294;gene_name=SRY;ID=stop_codon:HG00140_ch_T0000294;Name=SRY;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	2466981	2466983	.	-	0	source_transcript=ENST00000383070.2;source_transcript_name=SRY-201;source_gene=ENSG00000184895.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000184895.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383070.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000383070.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=ENST00000383070.2,ENST00000383070.2;transcript_id=HG00140_ch_T0000294;gene_id=HG00140_ch_G0000054;Parent=HG00140_ch_T0000294;transcript_name=HG00140_ch_T0000294;gene_name=SRY;ID=start_codon:HG00140_ch_T0000294;Name=SRY;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	2469207	2469708	.	+	.	source_gene_common_name=RNASEH2CP1;source_gene=ENSG00000237659.1;gene_id=HG00140_ch_G0000055;gene_biotype=transcribed_processed_pseudogene;gene_name=RNASEH2CP1;gene_sources=liftoff;ID=HG00140_ch_G0000055;Name=RNASEH2CP1
HG00140_chrY	CAT	transcript	2469207	2469708	1000	+	.	source_transcript=ENST00000454281.1;source_transcript_name=RNASEH2CP1-201;source_gene=ENSG00000237659.1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000237659.1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000454281.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454281.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNASEH2CP1;transcript_id=HG00140_ch_T0000296;gene_id=HG00140_ch_G0000055;Parent=HG00140_ch_G0000055;transcript_name=HG00140_ch_T0000296;gene_name=RNASEH2CP1;ID=HG00140_ch_T0000296;Name=RNASEH2CP1
HG00140_chrY	CAT	exon	2469207	2469708	.	+	.	source_transcript=ENST00000454281.1;source_transcript_name=RNASEH2CP1-201;source_gene=ENSG00000237659.1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000237659.1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000454281.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454281.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNASEH2CP1;transcript_id=HG00140_ch_T0000296;gene_id=HG00140_ch_G0000055;Parent=HG00140_ch_T0000296;transcript_name=HG00140_ch_T0000296;gene_name=RNASEH2CP1;ID=exon:HG00140_ch_T0000296:0;Name=RNASEH2CP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	2493711	2504855	.	+	.	source_gene_common_name=ENSG00000300312;source_gene=ENSG00000300312.1;alternative_source_transcripts=ENST00000770736.1,ENST00000770736.1;gene_id=HG00140_ch_G0000056;gene_biotype=lncRNA;gene_name=ENSG00000300312;gene_sources=liftoff;ID=HG00140_ch_G0000056;Name=ENSG00000300312
HG00140_chrY	CAT	transcript	2493711	2504855	1000	+	.	source_transcript=ENST00000770736.1;source_transcript_name=ENST00000770736;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770736.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770736.1,ENST00000770736.1;transcript_id=HG00140_ch_T0000297;gene_id=HG00140_ch_G0000056;Parent=HG00140_ch_G0000056;transcript_name=HG00140_ch_T0000297;gene_name=ENSG00000300312;ID=HG00140_ch_T0000297;Name=ENSG00000300312
HG00140_chrY	CAT	exon	2493711	2493746	.	+	.	source_transcript=ENST00000770736.1;source_transcript_name=ENST00000770736;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770736.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770736.1,ENST00000770736.1;transcript_id=HG00140_ch_T0000297;gene_id=HG00140_ch_G0000056;Parent=HG00140_ch_T0000297;transcript_name=HG00140_ch_T0000297;gene_name=ENSG00000300312;ID=exon:HG00140_ch_T0000297:0;Name=ENSG00000300312;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2493747	2503859	.	+	.	source_transcript=ENST00000770736.1;source_transcript_name=ENST00000770736;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770736.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770736.1,ENST00000770736.1;transcript_id=HG00140_ch_T0000297;gene_id=HG00140_ch_G0000056;Parent=HG00140_ch_T0000297;transcript_name=HG00140_ch_T0000297;gene_name=ENSG00000300312;ID=intron:HG00140_ch_T0000297:0;Name=ENSG00000300312;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2503860	2504082	.	+	.	source_transcript=ENST00000770736.1;source_transcript_name=ENST00000770736;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770736.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770736.1,ENST00000770736.1;transcript_id=HG00140_ch_T0000297;gene_id=HG00140_ch_G0000056;Parent=HG00140_ch_T0000297;transcript_name=HG00140_ch_T0000297;gene_name=ENSG00000300312;ID=exon:HG00140_ch_T0000297:1;Name=ENSG00000300312;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2504083	2504562	.	+	.	source_transcript=ENST00000770736.1;source_transcript_name=ENST00000770736;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770736.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770736.1,ENST00000770736.1;transcript_id=HG00140_ch_T0000297;gene_id=HG00140_ch_G0000056;Parent=HG00140_ch_T0000297;transcript_name=HG00140_ch_T0000297;gene_name=ENSG00000300312;ID=intron:HG00140_ch_T0000297:1;Name=ENSG00000300312;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2504563	2504855	.	+	.	source_transcript=ENST00000770736.1;source_transcript_name=ENST00000770736;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770736.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770736.1,ENST00000770736.1;transcript_id=HG00140_ch_T0000297;gene_id=HG00140_ch_G0000056;Parent=HG00140_ch_T0000297;transcript_name=HG00140_ch_T0000297;gene_name=ENSG00000300312;ID=exon:HG00140_ch_T0000297:2;Name=ENSG00000300312;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2493711	2503525	1000	+	.	source_transcript=ENST00000770737.1;source_transcript_name=ENST00000770737;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770737.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770737.1,ENST00000770737.1;transcript_id=HG00140_ch_T0000298;gene_id=HG00140_ch_G0000056;Parent=HG00140_ch_G0000056;transcript_name=HG00140_ch_T0000298;gene_name=ENSG00000300312;ID=HG00140_ch_T0000298;Name=ENSG00000300312
HG00140_chrY	CAT	exon	2493711	2493746	.	+	.	source_transcript=ENST00000770737.1;source_transcript_name=ENST00000770737;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770737.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770737.1,ENST00000770737.1;transcript_id=HG00140_ch_T0000298;gene_id=HG00140_ch_G0000056;Parent=HG00140_ch_T0000298;transcript_name=HG00140_ch_T0000298;gene_name=ENSG00000300312;ID=exon:HG00140_ch_T0000298:0;Name=ENSG00000300312;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2493747	2502819	.	+	.	source_transcript=ENST00000770737.1;source_transcript_name=ENST00000770737;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770737.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770737.1,ENST00000770737.1;transcript_id=HG00140_ch_T0000298;gene_id=HG00140_ch_G0000056;Parent=HG00140_ch_T0000298;transcript_name=HG00140_ch_T0000298;gene_name=ENSG00000300312;ID=intron:HG00140_ch_T0000298:0;Name=ENSG00000300312;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2502820	2503525	.	+	.	source_transcript=ENST00000770737.1;source_transcript_name=ENST00000770737;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770737.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770737.1,ENST00000770737.1;transcript_id=HG00140_ch_T0000298;gene_id=HG00140_ch_G0000056;Parent=HG00140_ch_T0000298;transcript_name=HG00140_ch_T0000298;gene_name=ENSG00000300312;ID=exon:HG00140_ch_T0000298:1;Name=ENSG00000300312;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2503955	2504843	1000	+	.	source_transcript=ENST00000770738.1;source_transcript_name=ENST00000770738;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770738.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770738.1,ENST00000770738.1;transcript_id=HG00140_ch_T0000299;gene_id=HG00140_ch_G0000056;Parent=HG00140_ch_G0000056;transcript_name=HG00140_ch_T0000299;gene_name=ENSG00000300312;ID=HG00140_ch_T0000299;Name=ENSG00000300312
HG00140_chrY	CAT	exon	2503955	2504082	.	+	.	source_transcript=ENST00000770738.1;source_transcript_name=ENST00000770738;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770738.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770738.1,ENST00000770738.1;transcript_id=HG00140_ch_T0000299;gene_id=HG00140_ch_G0000056;Parent=HG00140_ch_T0000299;transcript_name=HG00140_ch_T0000299;gene_name=ENSG00000300312;ID=exon:HG00140_ch_T0000299:0;Name=ENSG00000300312;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2504083	2504562	.	+	.	source_transcript=ENST00000770738.1;source_transcript_name=ENST00000770738;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770738.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770738.1,ENST00000770738.1;transcript_id=HG00140_ch_T0000299;gene_id=HG00140_ch_G0000056;Parent=HG00140_ch_T0000299;transcript_name=HG00140_ch_T0000299;gene_name=ENSG00000300312;ID=intron:HG00140_ch_T0000299:0;Name=ENSG00000300312;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2504563	2504843	.	+	.	source_transcript=ENST00000770738.1;source_transcript_name=ENST00000770738;source_gene=ENSG00000300312.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300312.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770738.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300312;alternative_source_transcripts=ENST00000770738.1,ENST00000770738.1;transcript_id=HG00140_ch_T0000299;gene_id=HG00140_ch_G0000056;Parent=HG00140_ch_T0000299;transcript_name=HG00140_ch_T0000299;gene_name=ENSG00000300312;ID=exon:HG00140_ch_T0000299:1;Name=ENSG00000300312;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	2507359	2507595	.	+	.	source_gene_common_name=TOMM22P2;source_gene=ENSG00000232195.1;alternative_source_transcripts=ENST00000430735.1,ENST00000430735.1;gene_id=HG00140_ch_G0000057;gene_biotype=processed_pseudogene;gene_name=TOMM22P2;gene_sources=liftoff;ID=HG00140_ch_G0000057;Name=TOMM22P2
HG00140_chrY	CAT	transcript	2507359	2507595	1000	+	.	source_transcript=ENST00000430735.1;source_transcript_name=TOMM22P2-201;source_gene=ENSG00000232195.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232195.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000430735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430735.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TOMM22P2;alternative_source_transcripts=ENST00000430735.1,ENST00000430735.1;transcript_id=HG00140_ch_T0000300;gene_id=HG00140_ch_G0000057;Parent=HG00140_ch_G0000057;transcript_name=HG00140_ch_T0000300;gene_name=TOMM22P2;ID=HG00140_ch_T0000300;Name=TOMM22P2
HG00140_chrY	CAT	exon	2507359	2507595	.	+	.	source_transcript=ENST00000430735.1;source_transcript_name=TOMM22P2-201;source_gene=ENSG00000232195.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232195.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000430735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430735.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TOMM22P2;alternative_source_transcripts=ENST00000430735.1,ENST00000430735.1;transcript_id=HG00140_ch_T0000300;gene_id=HG00140_ch_G0000057;Parent=HG00140_ch_T0000300;transcript_name=HG00140_ch_T0000300;gene_name=TOMM22P2;ID=exon:HG00140_ch_T0000300:0;Name=TOMM22P2;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	2507569	2520231	.	-	.	source_gene_common_name=ENSG00000286130;source_gene=ENSG00000286130.1;alternative_source_transcripts=ENST00000651710.1,ENST00000651710.1;gene_id=HG00140_ch_G0000058;gene_biotype=lncRNA;gene_name=ENSG00000286130;gene_sources=liftoff;ID=HG00140_ch_G0000058;Name=ENSG00000286130
HG00140_chrY	CAT	transcript	2507569	2520231	1000	-	.	source_transcript=ENST00000651710.1;source_transcript_name=ENST00000651710;source_gene=ENSG00000286130.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286130.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651710.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286130;alternative_source_transcripts=ENST00000651710.1,ENST00000651710.1;transcript_id=HG00140_ch_T0000301;gene_id=HG00140_ch_G0000058;Parent=HG00140_ch_G0000058;transcript_name=HG00140_ch_T0000301;gene_name=ENSG00000286130;ID=HG00140_ch_T0000301;Name=ENSG00000286130
HG00140_chrY	CAT	exon	2507569	2508112	.	-	.	source_transcript=ENST00000651710.1;source_transcript_name=ENST00000651710;source_gene=ENSG00000286130.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286130.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651710.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286130;alternative_source_transcripts=ENST00000651710.1,ENST00000651710.1;transcript_id=HG00140_ch_T0000301;gene_id=HG00140_ch_G0000058;Parent=HG00140_ch_T0000301;transcript_name=HG00140_ch_T0000301;gene_name=ENSG00000286130;ID=exon:HG00140_ch_T0000301:0;Name=ENSG00000286130;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2508113	2508902	.	-	.	source_transcript=ENST00000651710.1;source_transcript_name=ENST00000651710;source_gene=ENSG00000286130.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286130.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651710.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286130;alternative_source_transcripts=ENST00000651710.1,ENST00000651710.1;transcript_id=HG00140_ch_T0000301;gene_id=HG00140_ch_G0000058;Parent=HG00140_ch_T0000301;transcript_name=HG00140_ch_T0000301;gene_name=ENSG00000286130;ID=intron:HG00140_ch_T0000301:0;Name=ENSG00000286130;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2508903	2509128	.	-	.	source_transcript=ENST00000651710.1;source_transcript_name=ENST00000651710;source_gene=ENSG00000286130.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286130.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651710.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286130;alternative_source_transcripts=ENST00000651710.1,ENST00000651710.1;transcript_id=HG00140_ch_T0000301;gene_id=HG00140_ch_G0000058;Parent=HG00140_ch_T0000301;transcript_name=HG00140_ch_T0000301;gene_name=ENSG00000286130;ID=exon:HG00140_ch_T0000301:1;Name=ENSG00000286130;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2509129	2519850	.	-	.	source_transcript=ENST00000651710.1;source_transcript_name=ENST00000651710;source_gene=ENSG00000286130.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286130.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651710.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286130;alternative_source_transcripts=ENST00000651710.1,ENST00000651710.1;transcript_id=HG00140_ch_T0000301;gene_id=HG00140_ch_G0000058;Parent=HG00140_ch_T0000301;transcript_name=HG00140_ch_T0000301;gene_name=ENSG00000286130;ID=intron:HG00140_ch_T0000301:1;Name=ENSG00000286130;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2519851	2520231	.	-	.	source_transcript=ENST00000651710.1;source_transcript_name=ENST00000651710;source_gene=ENSG00000286130.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286130.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651710.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286130;alternative_source_transcripts=ENST00000651710.1,ENST00000651710.1;transcript_id=HG00140_ch_T0000301;gene_id=HG00140_ch_G0000058;Parent=HG00140_ch_T0000301;transcript_name=HG00140_ch_T0000301;gene_name=ENSG00000286130;ID=exon:HG00140_ch_T0000301:2;Name=ENSG00000286130;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	2520982	2611734	.	+	.	source_gene_common_name=RPS4Y1;source_gene=ENSG00000129824.16;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;gene_id=HG00140_ch_G0000059;gene_biotype=protein_coding;gene_name=RPS4Y1;gene_sources=liftoff;ID=HG00140_ch_G0000059;Name=RPS4Y1
HG00140_chrY	CAT	transcript	2520982	2546649	100	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG00140_ch_T0000302;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_G0000059;transcript_name=HG00140_ch_T0000302;gene_name=RPS4Y1;ID=HG00140_ch_T0000302;Name=RPS4Y1
HG00140_chrY	CAT	exon	2520982	2521007	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG00140_ch_T0000302;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000302;transcript_name=HG00140_ch_T0000302;gene_name=RPS4Y1;ID=exon:HG00140_ch_T0000302:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2521005	2521007	.	+	0	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG00140_ch_T0000302;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000302;transcript_name=HG00140_ch_T0000302;gene_name=RPS4Y1;ID=CDS:HG00140_ch_T0000302:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	2521005	2521007	.	+	0	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG00140_ch_T0000302;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000302;transcript_name=HG00140_ch_T0000302;gene_name=RPS4Y1;ID=start_codon:HG00140_ch_T0000302;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2521008	2521544	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG00140_ch_T0000302;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000302;transcript_name=HG00140_ch_T0000302;gene_name=RPS4Y1;ID=intron:HG00140_ch_T0000302:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2521545	2521622	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG00140_ch_T0000302;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000302;transcript_name=HG00140_ch_T0000302;gene_name=RPS4Y1;ID=exon:HG00140_ch_T0000302:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2521545	2521622	.	+	0	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG00140_ch_T0000302;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000302;transcript_name=HG00140_ch_T0000302;gene_name=RPS4Y1;ID=CDS:HG00140_ch_T0000302:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2521623	2523456	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG00140_ch_T0000302;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000302;transcript_name=HG00140_ch_T0000302;gene_name=RPS4Y1;ID=intron:HG00140_ch_T0000302:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2523457	2523637	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG00140_ch_T0000302;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000302;transcript_name=HG00140_ch_T0000302;gene_name=RPS4Y1;ID=exon:HG00140_ch_T0000302:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2523457	2523637	.	+	0	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG00140_ch_T0000302;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000302;transcript_name=HG00140_ch_T0000302;gene_name=RPS4Y1;ID=CDS:HG00140_ch_T0000302:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2523638	2525025	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG00140_ch_T0000302;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000302;transcript_name=HG00140_ch_T0000302;gene_name=RPS4Y1;ID=intron:HG00140_ch_T0000302:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2525026	2525123	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG00140_ch_T0000302;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000302;transcript_name=HG00140_ch_T0000302;gene_name=RPS4Y1;ID=exon:HG00140_ch_T0000302:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2525026	2525123	.	+	2	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG00140_ch_T0000302;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000302;transcript_name=HG00140_ch_T0000302;gene_name=RPS4Y1;ID=CDS:HG00140_ch_T0000302:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2525124	2533980	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG00140_ch_T0000302;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000302;transcript_name=HG00140_ch_T0000302;gene_name=RPS4Y1;ID=intron:HG00140_ch_T0000302:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2533981	2534152	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG00140_ch_T0000302;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000302;transcript_name=HG00140_ch_T0000302;gene_name=RPS4Y1;ID=exon:HG00140_ch_T0000302:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2533981	2534152	.	+	0	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG00140_ch_T0000302;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000302;transcript_name=HG00140_ch_T0000302;gene_name=RPS4Y1;ID=CDS:HG00140_ch_T0000302:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2534153	2544468	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG00140_ch_T0000302;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000302;transcript_name=HG00140_ch_T0000302;gene_name=RPS4Y1;ID=intron:HG00140_ch_T0000302:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2544469	2544626	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG00140_ch_T0000302;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000302;transcript_name=HG00140_ch_T0000302;gene_name=RPS4Y1;ID=exon:HG00140_ch_T0000302:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2544469	2544626	.	+	2	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG00140_ch_T0000302;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000302;transcript_name=HG00140_ch_T0000302;gene_name=RPS4Y1;ID=CDS:HG00140_ch_T0000302:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2544627	2546173	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG00140_ch_T0000302;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000302;transcript_name=HG00140_ch_T0000302;gene_name=RPS4Y1;ID=intron:HG00140_ch_T0000302:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2546174	2546649	.	+	.	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG00140_ch_T0000302;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000302;transcript_name=HG00140_ch_T0000302;gene_name=RPS4Y1;ID=exon:HG00140_ch_T0000302:6;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2546174	2546275	.	+	0	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG00140_ch_T0000302;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000302;transcript_name=HG00140_ch_T0000302;gene_name=RPS4Y1;ID=CDS:HG00140_ch_T0000302:6;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	2546273	2546275	.	+	0	source_transcript=ENST00000250784.13;source_transcript_name=RPS4Y1-201;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250784.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000250784.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000250784.13,ENST00000250784.13;transcript_id=HG00140_ch_T0000302;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000302;transcript_name=HG00140_ch_T0000302;gene_name=RPS4Y1;ID=stop_codon:HG00140_ch_T0000302;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2521300	2546243	100	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG00140_ch_T0000303;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_G0000059;transcript_name=HG00140_ch_T0000303;gene_name=RPS4Y1;ID=HG00140_ch_T0000303;Name=RPS4Y1
HG00140_chrY	CAT	exon	2521300	2521353	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG00140_ch_T0000303;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000303;transcript_name=HG00140_ch_T0000303;gene_name=RPS4Y1;ID=exon:HG00140_ch_T0000303:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2521324	2521353	.	+	0	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG00140_ch_T0000303;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000303;transcript_name=HG00140_ch_T0000303;gene_name=RPS4Y1;ID=CDS:HG00140_ch_T0000303:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	2521324	2521326	.	+	0	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG00140_ch_T0000303;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000303;transcript_name=HG00140_ch_T0000303;gene_name=RPS4Y1;ID=start_codon:HG00140_ch_T0000303;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2521354	2521544	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG00140_ch_T0000303;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000303;transcript_name=HG00140_ch_T0000303;gene_name=RPS4Y1;ID=intron:HG00140_ch_T0000303:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2521545	2521622	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG00140_ch_T0000303;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000303;transcript_name=HG00140_ch_T0000303;gene_name=RPS4Y1;ID=exon:HG00140_ch_T0000303:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2521545	2521622	.	+	0	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG00140_ch_T0000303;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000303;transcript_name=HG00140_ch_T0000303;gene_name=RPS4Y1;ID=CDS:HG00140_ch_T0000303:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2521623	2523456	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG00140_ch_T0000303;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000303;transcript_name=HG00140_ch_T0000303;gene_name=RPS4Y1;ID=intron:HG00140_ch_T0000303:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2523457	2523637	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG00140_ch_T0000303;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000303;transcript_name=HG00140_ch_T0000303;gene_name=RPS4Y1;ID=exon:HG00140_ch_T0000303:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2523457	2523637	.	+	0	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG00140_ch_T0000303;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000303;transcript_name=HG00140_ch_T0000303;gene_name=RPS4Y1;ID=CDS:HG00140_ch_T0000303:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2523638	2525025	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG00140_ch_T0000303;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000303;transcript_name=HG00140_ch_T0000303;gene_name=RPS4Y1;ID=intron:HG00140_ch_T0000303:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2525026	2525123	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG00140_ch_T0000303;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000303;transcript_name=HG00140_ch_T0000303;gene_name=RPS4Y1;ID=exon:HG00140_ch_T0000303:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2525026	2525123	.	+	2	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG00140_ch_T0000303;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000303;transcript_name=HG00140_ch_T0000303;gene_name=RPS4Y1;ID=CDS:HG00140_ch_T0000303:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2525124	2533980	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG00140_ch_T0000303;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000303;transcript_name=HG00140_ch_T0000303;gene_name=RPS4Y1;ID=intron:HG00140_ch_T0000303:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2533981	2534152	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG00140_ch_T0000303;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000303;transcript_name=HG00140_ch_T0000303;gene_name=RPS4Y1;ID=exon:HG00140_ch_T0000303:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2533981	2534152	.	+	0	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG00140_ch_T0000303;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000303;transcript_name=HG00140_ch_T0000303;gene_name=RPS4Y1;ID=CDS:HG00140_ch_T0000303:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2534153	2544468	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG00140_ch_T0000303;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000303;transcript_name=HG00140_ch_T0000303;gene_name=RPS4Y1;ID=intron:HG00140_ch_T0000303:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2544469	2544626	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG00140_ch_T0000303;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000303;transcript_name=HG00140_ch_T0000303;gene_name=RPS4Y1;ID=exon:HG00140_ch_T0000303:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2544469	2544626	.	+	2	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG00140_ch_T0000303;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000303;transcript_name=HG00140_ch_T0000303;gene_name=RPS4Y1;ID=CDS:HG00140_ch_T0000303:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2544627	2546173	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG00140_ch_T0000303;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000303;transcript_name=HG00140_ch_T0000303;gene_name=RPS4Y1;ID=intron:HG00140_ch_T0000303:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2546174	2546243	.	+	.	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG00140_ch_T0000303;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000303;transcript_name=HG00140_ch_T0000303;gene_name=RPS4Y1;ID=exon:HG00140_ch_T0000303:6;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2546174	2546243	.	+	0	source_transcript=ENST00000430575.1;source_transcript_name=RPS4Y1-202;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000430575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430575.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000430575.1,ENST00000430575.1;transcript_id=HG00140_ch_T0000303;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000303;transcript_name=HG00140_ch_T0000303;gene_name=RPS4Y1;ID=CDS:HG00140_ch_T0000303:6;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2533477	2546337	1000	+	.	source_transcript=ENST00000477725.1;source_transcript_name=RPS4Y1-203;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477725.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000477725.1,ENST00000477725.1;transcript_id=HG00140_ch_T0000304;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_G0000059;transcript_name=HG00140_ch_T0000304;gene_name=RPS4Y1;ID=HG00140_ch_T0000304;Name=RPS4Y1
HG00140_chrY	CAT	exon	2533477	2534152	.	+	.	source_transcript=ENST00000477725.1;source_transcript_name=RPS4Y1-203;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477725.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000477725.1,ENST00000477725.1;transcript_id=HG00140_ch_T0000304;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000304;transcript_name=HG00140_ch_T0000304;gene_name=RPS4Y1;ID=exon:HG00140_ch_T0000304:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2534153	2544468	.	+	.	source_transcript=ENST00000477725.1;source_transcript_name=RPS4Y1-203;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477725.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000477725.1,ENST00000477725.1;transcript_id=HG00140_ch_T0000304;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000304;transcript_name=HG00140_ch_T0000304;gene_name=RPS4Y1;ID=intron:HG00140_ch_T0000304:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2544469	2544626	.	+	.	source_transcript=ENST00000477725.1;source_transcript_name=RPS4Y1-203;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477725.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000477725.1,ENST00000477725.1;transcript_id=HG00140_ch_T0000304;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000304;transcript_name=HG00140_ch_T0000304;gene_name=RPS4Y1;ID=exon:HG00140_ch_T0000304:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2544627	2546173	.	+	.	source_transcript=ENST00000477725.1;source_transcript_name=RPS4Y1-203;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477725.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000477725.1,ENST00000477725.1;transcript_id=HG00140_ch_T0000304;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000304;transcript_name=HG00140_ch_T0000304;gene_name=RPS4Y1;ID=intron:HG00140_ch_T0000304:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2546174	2546337	.	+	.	source_transcript=ENST00000477725.1;source_transcript_name=RPS4Y1-203;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477725.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000477725.1,ENST00000477725.1;transcript_id=HG00140_ch_T0000304;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000304;transcript_name=HG00140_ch_T0000304;gene_name=RPS4Y1;ID=exon:HG00140_ch_T0000304:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2534111	2611734	1000	+	.	source_transcript=ENST00000515575.1;source_transcript_name=RPS4Y1-204;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000515575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515575.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000515575.1,ENST00000515575.1;transcript_id=HG00140_ch_T0000305;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_G0000059;transcript_name=HG00140_ch_T0000305;gene_name=RPS4Y1;ID=HG00140_ch_T0000305;Name=RPS4Y1
HG00140_chrY	CAT	exon	2534111	2534152	.	+	.	source_transcript=ENST00000515575.1;source_transcript_name=RPS4Y1-204;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000515575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515575.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000515575.1,ENST00000515575.1;transcript_id=HG00140_ch_T0000305;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000305;transcript_name=HG00140_ch_T0000305;gene_name=RPS4Y1;ID=exon:HG00140_ch_T0000305:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2534153	2608598	.	+	.	source_transcript=ENST00000515575.1;source_transcript_name=RPS4Y1-204;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000515575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515575.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000515575.1,ENST00000515575.1;transcript_id=HG00140_ch_T0000305;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000305;transcript_name=HG00140_ch_T0000305;gene_name=RPS4Y1;ID=intron:HG00140_ch_T0000305:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2608599	2608720	.	+	.	source_transcript=ENST00000515575.1;source_transcript_name=RPS4Y1-204;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000515575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515575.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000515575.1,ENST00000515575.1;transcript_id=HG00140_ch_T0000305;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000305;transcript_name=HG00140_ch_T0000305;gene_name=RPS4Y1;ID=exon:HG00140_ch_T0000305:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2608721	2611444	.	+	.	source_transcript=ENST00000515575.1;source_transcript_name=RPS4Y1-204;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000515575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515575.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000515575.1,ENST00000515575.1;transcript_id=HG00140_ch_T0000305;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000305;transcript_name=HG00140_ch_T0000305;gene_name=RPS4Y1;ID=intron:HG00140_ch_T0000305:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2611445	2611734	.	+	.	source_transcript=ENST00000515575.1;source_transcript_name=RPS4Y1-204;source_gene=ENSG00000129824.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129824.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000515575.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515575.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=ENST00000515575.1,ENST00000515575.1;transcript_id=HG00140_ch_T0000305;gene_id=HG00140_ch_G0000059;Parent=HG00140_ch_T0000305;transcript_name=HG00140_ch_T0000305;gene_name=RPS4Y1;ID=exon:HG00140_ch_T0000305:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	2561065	2563034	.	-	.	source_gene_common_name=HSFY3P;source_gene=ENSG00000227289.3;gene_id=HG00140_ch_G0000060;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=HSFY3P;gene_sources=liftoff;ID=HG00140_ch_G0000060;Name=HSFY3P
HG00140_chrY	CAT	transcript	2561065	2563034	1000	-	.	source_transcript=ENST00000444242.1;source_transcript_name=HSFY3P-201;source_gene=ENSG00000227289.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227289.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444242.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY3P;transcript_id=HG00140_ch_T0000306;gene_id=HG00140_ch_G0000060;Parent=HG00140_ch_G0000060;transcript_name=HG00140_ch_T0000306;gene_name=HSFY3P;ID=HG00140_ch_T0000306;Name=HSFY3P
HG00140_chrY	CAT	exon	2561065	2561743	.	-	.	source_transcript=ENST00000444242.1;source_transcript_name=HSFY3P-201;source_gene=ENSG00000227289.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227289.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY3P;transcript_id=HG00140_ch_T0000306;gene_id=HG00140_ch_G0000060;Parent=HG00140_ch_T0000306;transcript_name=HG00140_ch_T0000306;gene_name=HSFY3P;ID=exon:HG00140_ch_T0000306:0;Name=HSFY3P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2561744	2562522	.	-	.	source_transcript=ENST00000444242.1;source_transcript_name=HSFY3P-201;source_gene=ENSG00000227289.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227289.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY3P;transcript_id=HG00140_ch_T0000306;gene_id=HG00140_ch_G0000060;Parent=HG00140_ch_T0000306;transcript_name=HG00140_ch_T0000306;gene_name=HSFY3P;ID=intron:HG00140_ch_T0000306:0;Name=HSFY3P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2562523	2563034	.	-	.	source_transcript=ENST00000444242.1;source_transcript_name=HSFY3P-201;source_gene=ENSG00000227289.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227289.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY3P;transcript_id=HG00140_ch_T0000306;gene_id=HG00140_ch_G0000060;Parent=HG00140_ch_T0000306;transcript_name=HG00140_ch_T0000306;gene_name=HSFY3P;ID=exon:HG00140_ch_T0000306:1;Name=HSFY3P;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	2562492	2569933	.	-	.	source_gene_common_name=ENSG00000290841;source_gene=ENSG00000290841.1;gene_id=HG00140_ch_G0000061;gene_biotype=lncRNA;gene_name=ENSG00000290841;gene_sources=liftoff;ID=HG00140_ch_G0000061;Name=ENSG00000290841
HG00140_chrY	CAT	transcript	2562492	2569933	1000	-	.	source_transcript=ENST00000652562.1;source_transcript_name=ENST00000652562;source_gene=ENSG00000290841.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290841.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652562.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290841;transcript_id=HG00140_ch_T0000307;gene_id=HG00140_ch_G0000061;Parent=HG00140_ch_G0000061;transcript_name=HG00140_ch_T0000307;gene_name=ENSG00000290841;ID=HG00140_ch_T0000307;Name=ENSG00000290841
HG00140_chrY	CAT	exon	2562492	2562789	.	-	.	source_transcript=ENST00000652562.1;source_transcript_name=ENST00000652562;source_gene=ENSG00000290841.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290841.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652562.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290841;transcript_id=HG00140_ch_T0000307;gene_id=HG00140_ch_G0000061;Parent=HG00140_ch_T0000307;transcript_name=HG00140_ch_T0000307;gene_name=ENSG00000290841;ID=exon:HG00140_ch_T0000307:0;Name=ENSG00000290841;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2562790	2566524	.	-	.	source_transcript=ENST00000652562.1;source_transcript_name=ENST00000652562;source_gene=ENSG00000290841.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290841.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652562.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290841;transcript_id=HG00140_ch_T0000307;gene_id=HG00140_ch_G0000061;Parent=HG00140_ch_T0000307;transcript_name=HG00140_ch_T0000307;gene_name=ENSG00000290841;ID=intron:HG00140_ch_T0000307:0;Name=ENSG00000290841;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2566525	2566625	.	-	.	source_transcript=ENST00000652562.1;source_transcript_name=ENST00000652562;source_gene=ENSG00000290841.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290841.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652562.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290841;transcript_id=HG00140_ch_T0000307;gene_id=HG00140_ch_G0000061;Parent=HG00140_ch_T0000307;transcript_name=HG00140_ch_T0000307;gene_name=ENSG00000290841;ID=exon:HG00140_ch_T0000307:1;Name=ENSG00000290841;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2566626	2567826	.	-	.	source_transcript=ENST00000652562.1;source_transcript_name=ENST00000652562;source_gene=ENSG00000290841.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290841.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652562.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290841;transcript_id=HG00140_ch_T0000307;gene_id=HG00140_ch_G0000061;Parent=HG00140_ch_T0000307;transcript_name=HG00140_ch_T0000307;gene_name=ENSG00000290841;ID=intron:HG00140_ch_T0000307:1;Name=ENSG00000290841;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2567827	2567944	.	-	.	source_transcript=ENST00000652562.1;source_transcript_name=ENST00000652562;source_gene=ENSG00000290841.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290841.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652562.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290841;transcript_id=HG00140_ch_T0000307;gene_id=HG00140_ch_G0000061;Parent=HG00140_ch_T0000307;transcript_name=HG00140_ch_T0000307;gene_name=ENSG00000290841;ID=exon:HG00140_ch_T0000307:2;Name=ENSG00000290841;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2567945	2569803	.	-	.	source_transcript=ENST00000652562.1;source_transcript_name=ENST00000652562;source_gene=ENSG00000290841.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290841.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652562.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290841;transcript_id=HG00140_ch_T0000307;gene_id=HG00140_ch_G0000061;Parent=HG00140_ch_T0000307;transcript_name=HG00140_ch_T0000307;gene_name=ENSG00000290841;ID=intron:HG00140_ch_T0000307:2;Name=ENSG00000290841;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2569804	2569933	.	-	.	source_transcript=ENST00000652562.1;source_transcript_name=ENST00000652562;source_gene=ENSG00000290841.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290841.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652562.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290841;transcript_id=HG00140_ch_T0000307;gene_id=HG00140_ch_G0000061;Parent=HG00140_ch_T0000307;transcript_name=HG00140_ch_T0000307;gene_name=ENSG00000290841;ID=exon:HG00140_ch_T0000307:3;Name=ENSG00000290841;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	2608736	2610854	.	-	.	source_gene_common_name=NAP1L1P2;source_gene=ENSG00000229163.2;alternative_source_transcripts=ENST00000414182.2,ENST00000414182.2;gene_id=HG00140_ch_G0000062;gene_biotype=processed_pseudogene;gene_name=NAP1L1P2;gene_sources=liftoff;ID=HG00140_ch_G0000062;Name=NAP1L1P2
HG00140_chrY	CAT	transcript	2608736	2610854	1000	-	.	source_transcript=ENST00000414182.2;source_transcript_name=NAP1L1P2-201;source_gene=ENSG00000229163.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229163.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000414182.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000414182.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NAP1L1P2;alternative_source_transcripts=ENST00000414182.2,ENST00000414182.2;transcript_id=HG00140_ch_T0000308;gene_id=HG00140_ch_G0000062;Parent=HG00140_ch_G0000062;transcript_name=HG00140_ch_T0000308;gene_name=NAP1L1P2;ID=HG00140_ch_T0000308;Name=NAP1L1P2
HG00140_chrY	CAT	exon	2608736	2608777	.	-	.	source_transcript=ENST00000414182.2;source_transcript_name=NAP1L1P2-201;source_gene=ENSG00000229163.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229163.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000414182.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000414182.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NAP1L1P2;alternative_source_transcripts=ENST00000414182.2,ENST00000414182.2;transcript_id=HG00140_ch_T0000308;gene_id=HG00140_ch_G0000062;Parent=HG00140_ch_T0000308;transcript_name=HG00140_ch_T0000308;gene_name=NAP1L1P2;ID=exon:HG00140_ch_T0000308:0;Name=NAP1L1P2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2608778	2609104	.	-	.	source_transcript=ENST00000414182.2;source_transcript_name=NAP1L1P2-201;source_gene=ENSG00000229163.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229163.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000414182.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000414182.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NAP1L1P2;alternative_source_transcripts=ENST00000414182.2,ENST00000414182.2;transcript_id=HG00140_ch_T0000308;gene_id=HG00140_ch_G0000062;Parent=HG00140_ch_T0000308;transcript_name=HG00140_ch_T0000308;gene_name=NAP1L1P2;ID=intron:HG00140_ch_T0000308:0;Name=NAP1L1P2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2609105	2610101	.	-	.	source_transcript=ENST00000414182.2;source_transcript_name=NAP1L1P2-201;source_gene=ENSG00000229163.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229163.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000414182.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000414182.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NAP1L1P2;alternative_source_transcripts=ENST00000414182.2,ENST00000414182.2;transcript_id=HG00140_ch_T0000308;gene_id=HG00140_ch_G0000062;Parent=HG00140_ch_T0000308;transcript_name=HG00140_ch_T0000308;gene_name=NAP1L1P2;ID=exon:HG00140_ch_T0000308:1;Name=NAP1L1P2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2610102	2610804	.	-	.	source_transcript=ENST00000414182.2;source_transcript_name=NAP1L1P2-201;source_gene=ENSG00000229163.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229163.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000414182.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000414182.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NAP1L1P2;alternative_source_transcripts=ENST00000414182.2,ENST00000414182.2;transcript_id=HG00140_ch_T0000308;gene_id=HG00140_ch_G0000062;Parent=HG00140_ch_T0000308;transcript_name=HG00140_ch_T0000308;gene_name=NAP1L1P2;ID=intron:HG00140_ch_T0000308:1;Name=NAP1L1P2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2610805	2610854	.	-	.	source_transcript=ENST00000414182.2;source_transcript_name=NAP1L1P2-201;source_gene=ENSG00000229163.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229163.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000414182.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000414182.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NAP1L1P2;alternative_source_transcripts=ENST00000414182.2,ENST00000414182.2;transcript_id=HG00140_ch_T0000308;gene_id=HG00140_ch_G0000062;Parent=HG00140_ch_T0000308;transcript_name=HG00140_ch_T0000308;gene_name=NAP1L1P2;ID=exon:HG00140_ch_T0000308:2;Name=NAP1L1P2;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	2614140	2614505	.	-	.	source_gene_common_name=ENSG00000278847;source_gene=ENSG00000278847.1;alternative_source_transcripts=ENST00000611750.1,ENST00000611750.1;gene_id=HG00140_ch_G0000063;gene_biotype=lncRNA;gene_name=ENSG00000278847;gene_sources=liftoff;ID=HG00140_ch_G0000063;Name=ENSG00000278847
HG00140_chrY	CAT	transcript	2614140	2614505	1000	-	.	source_transcript=ENST00000611750.1;source_transcript_name=ENST00000611750;source_gene=ENSG00000278847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000278847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000611750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000611750.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278847;alternative_source_transcripts=ENST00000611750.1,ENST00000611750.1;transcript_id=HG00140_ch_T0000309;gene_id=HG00140_ch_G0000063;Parent=HG00140_ch_G0000063;transcript_name=HG00140_ch_T0000309;gene_name=ENSG00000278847;ID=HG00140_ch_T0000309;Name=ENSG00000278847
HG00140_chrY	CAT	exon	2614140	2614505	.	-	.	source_transcript=ENST00000611750.1;source_transcript_name=ENST00000611750;source_gene=ENSG00000278847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000278847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000611750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000611750.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278847;alternative_source_transcripts=ENST00000611750.1,ENST00000611750.1;transcript_id=HG00140_ch_T0000309;gene_id=HG00140_ch_G0000063;Parent=HG00140_ch_T0000309;transcript_name=HG00140_ch_T0000309;gene_name=ENSG00000278847;ID=exon:HG00140_ch_T0000309:0;Name=ENSG00000278847;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	2615015	2662233	.	+	.	source_gene_common_name=ZFY;source_gene=ENSG00000067646.12;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;gene_id=HG00140_ch_G0000064;gene_biotype=protein_coding;gene_name=ZFY;gene_sources=liftoff;ID=HG00140_ch_G0000064;Name=ZFY
HG00140_chrY	CAT	transcript	2615015	2662233	100	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG00140_ch_T0000310;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_G0000064;transcript_name=HG00140_ch_T0000310;gene_name=ZFY;ID=HG00140_ch_T0000310;Name=ZFY
HG00140_chrY	CAT	exon	2615015	2615180	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG00140_ch_T0000310;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000310;transcript_name=HG00140_ch_T0000310;gene_name=ZFY;ID=exon:HG00140_ch_T0000310:0;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2615181	2633635	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG00140_ch_T0000310;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000310;transcript_name=HG00140_ch_T0000310;gene_name=ZFY;ID=intron:HG00140_ch_T0000310:0;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2633636	2633724	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG00140_ch_T0000310;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000310;transcript_name=HG00140_ch_T0000310;gene_name=ZFY;ID=exon:HG00140_ch_T0000310:1;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2633664	2633724	.	+	0	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG00140_ch_T0000310;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000310;transcript_name=HG00140_ch_T0000310;gene_name=ZFY;ID=CDS:HG00140_ch_T0000310:0;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	2633664	2633666	.	+	0	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG00140_ch_T0000310;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000310;transcript_name=HG00140_ch_T0000310;gene_name=ZFY;ID=start_codon:HG00140_ch_T0000310;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2633725	2640800	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG00140_ch_T0000310;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000310;transcript_name=HG00140_ch_T0000310;gene_name=ZFY;ID=intron:HG00140_ch_T0000310:1;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2640801	2641373	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG00140_ch_T0000310;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000310;transcript_name=HG00140_ch_T0000310;gene_name=ZFY;ID=exon:HG00140_ch_T0000310:2;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2640801	2641373	.	+	2	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG00140_ch_T0000310;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000310;transcript_name=HG00140_ch_T0000310;gene_name=ZFY;ID=CDS:HG00140_ch_T0000310:1;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2641374	2654821	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG00140_ch_T0000310;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000310;transcript_name=HG00140_ch_T0000310;gene_name=ZFY;ID=intron:HG00140_ch_T0000310:2;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2654822	2654971	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG00140_ch_T0000310;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000310;transcript_name=HG00140_ch_T0000310;gene_name=ZFY;ID=exon:HG00140_ch_T0000310:3;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2654822	2654971	.	+	2	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG00140_ch_T0000310;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000310;transcript_name=HG00140_ch_T0000310;gene_name=ZFY;ID=CDS:HG00140_ch_T0000310:2;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2654972	2655237	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG00140_ch_T0000310;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000310;transcript_name=HG00140_ch_T0000310;gene_name=ZFY;ID=intron:HG00140_ch_T0000310:3;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2655238	2655381	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG00140_ch_T0000310;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000310;transcript_name=HG00140_ch_T0000310;gene_name=ZFY;ID=exon:HG00140_ch_T0000310:4;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2655238	2655381	.	+	2	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG00140_ch_T0000310;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000310;transcript_name=HG00140_ch_T0000310;gene_name=ZFY;ID=CDS:HG00140_ch_T0000310:3;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2655382	2656396	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG00140_ch_T0000310;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000310;transcript_name=HG00140_ch_T0000310;gene_name=ZFY;ID=intron:HG00140_ch_T0000310:4;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2656397	2656549	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG00140_ch_T0000310;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000310;transcript_name=HG00140_ch_T0000310;gene_name=ZFY;ID=exon:HG00140_ch_T0000310:5;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2656397	2656549	.	+	2	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG00140_ch_T0000310;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000310;transcript_name=HG00140_ch_T0000310;gene_name=ZFY;ID=CDS:HG00140_ch_T0000310:4;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2656550	2657666	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG00140_ch_T0000310;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000310;transcript_name=HG00140_ch_T0000310;gene_name=ZFY;ID=intron:HG00140_ch_T0000310:5;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2657667	2657807	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG00140_ch_T0000310;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000310;transcript_name=HG00140_ch_T0000310;gene_name=ZFY;ID=exon:HG00140_ch_T0000310:6;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2657667	2657807	.	+	2	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG00140_ch_T0000310;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000310;transcript_name=HG00140_ch_T0000310;gene_name=ZFY;ID=CDS:HG00140_ch_T0000310:5;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2657808	2658536	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG00140_ch_T0000310;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000310;transcript_name=HG00140_ch_T0000310;gene_name=ZFY;ID=intron:HG00140_ch_T0000310:6;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2658537	2662233	.	+	.	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG00140_ch_T0000310;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000310;transcript_name=HG00140_ch_T0000310;gene_name=ZFY;ID=exon:HG00140_ch_T0000310:7;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2658537	2659720	.	+	2	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG00140_ch_T0000310;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000310;transcript_name=HG00140_ch_T0000310;gene_name=ZFY;ID=CDS:HG00140_ch_T0000310:6;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	2659718	2659720	.	+	0	source_transcript=ENST00000383052.5;source_transcript_name=ZFY-202;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383052.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000383052.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000383052.5,ENST00000383052.5;transcript_id=HG00140_ch_T0000310;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000310;transcript_name=HG00140_ch_T0000310;gene_name=ZFY;ID=stop_codon:HG00140_ch_T0000310;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2615115	2662233	100	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG00140_ch_T0000311;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_G0000064;transcript_name=HG00140_ch_T0000311;gene_name=ZFY;ID=HG00140_ch_T0000311;Name=ZFY
HG00140_chrY	CAT	exon	2615115	2615503	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG00140_ch_T0000311;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000311;transcript_name=HG00140_ch_T0000311;gene_name=ZFY;ID=exon:HG00140_ch_T0000311:0;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2615504	2633635	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG00140_ch_T0000311;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000311;transcript_name=HG00140_ch_T0000311;gene_name=ZFY;ID=intron:HG00140_ch_T0000311:0;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2633636	2633724	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG00140_ch_T0000311;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000311;transcript_name=HG00140_ch_T0000311;gene_name=ZFY;ID=exon:HG00140_ch_T0000311:1;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2633664	2633724	.	+	0	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG00140_ch_T0000311;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000311;transcript_name=HG00140_ch_T0000311;gene_name=ZFY;ID=CDS:HG00140_ch_T0000311:0;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	2633664	2633666	.	+	0	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG00140_ch_T0000311;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000311;transcript_name=HG00140_ch_T0000311;gene_name=ZFY;ID=start_codon:HG00140_ch_T0000311;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2633725	2640800	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG00140_ch_T0000311;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000311;transcript_name=HG00140_ch_T0000311;gene_name=ZFY;ID=intron:HG00140_ch_T0000311:1;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2640801	2641373	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG00140_ch_T0000311;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000311;transcript_name=HG00140_ch_T0000311;gene_name=ZFY;ID=exon:HG00140_ch_T0000311:2;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2640801	2641373	.	+	2	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG00140_ch_T0000311;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000311;transcript_name=HG00140_ch_T0000311;gene_name=ZFY;ID=CDS:HG00140_ch_T0000311:1;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2641374	2654821	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG00140_ch_T0000311;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000311;transcript_name=HG00140_ch_T0000311;gene_name=ZFY;ID=intron:HG00140_ch_T0000311:2;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2654822	2654971	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG00140_ch_T0000311;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000311;transcript_name=HG00140_ch_T0000311;gene_name=ZFY;ID=exon:HG00140_ch_T0000311:3;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2654822	2654971	.	+	2	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG00140_ch_T0000311;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000311;transcript_name=HG00140_ch_T0000311;gene_name=ZFY;ID=CDS:HG00140_ch_T0000311:2;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2654972	2655237	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG00140_ch_T0000311;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000311;transcript_name=HG00140_ch_T0000311;gene_name=ZFY;ID=intron:HG00140_ch_T0000311:3;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2655238	2655381	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG00140_ch_T0000311;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000311;transcript_name=HG00140_ch_T0000311;gene_name=ZFY;ID=exon:HG00140_ch_T0000311:4;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2655238	2655381	.	+	2	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG00140_ch_T0000311;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000311;transcript_name=HG00140_ch_T0000311;gene_name=ZFY;ID=CDS:HG00140_ch_T0000311:3;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2655382	2656396	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG00140_ch_T0000311;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000311;transcript_name=HG00140_ch_T0000311;gene_name=ZFY;ID=intron:HG00140_ch_T0000311:4;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2656397	2656549	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG00140_ch_T0000311;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000311;transcript_name=HG00140_ch_T0000311;gene_name=ZFY;ID=exon:HG00140_ch_T0000311:5;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2656397	2656549	.	+	2	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG00140_ch_T0000311;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000311;transcript_name=HG00140_ch_T0000311;gene_name=ZFY;ID=CDS:HG00140_ch_T0000311:4;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2656550	2657666	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG00140_ch_T0000311;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000311;transcript_name=HG00140_ch_T0000311;gene_name=ZFY;ID=intron:HG00140_ch_T0000311:5;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2657667	2657807	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG00140_ch_T0000311;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000311;transcript_name=HG00140_ch_T0000311;gene_name=ZFY;ID=exon:HG00140_ch_T0000311:6;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2657667	2657807	.	+	2	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG00140_ch_T0000311;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000311;transcript_name=HG00140_ch_T0000311;gene_name=ZFY;ID=CDS:HG00140_ch_T0000311:5;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2657808	2658536	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG00140_ch_T0000311;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000311;transcript_name=HG00140_ch_T0000311;gene_name=ZFY;ID=intron:HG00140_ch_T0000311:6;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2658537	2662233	.	+	.	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG00140_ch_T0000311;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000311;transcript_name=HG00140_ch_T0000311;gene_name=ZFY;ID=exon:HG00140_ch_T0000311:7;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2658537	2659720	.	+	2	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG00140_ch_T0000311;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000311;transcript_name=HG00140_ch_T0000311;gene_name=ZFY;ID=CDS:HG00140_ch_T0000311:6;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	2659718	2659720	.	+	0	source_transcript=ENST00000155093.8;source_transcript_name=ZFY-201;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000155093.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000155093.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000155093.8,ENST00000155093.8;transcript_id=HG00140_ch_T0000311;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000311;transcript_name=HG00140_ch_T0000311;gene_name=ZFY;ID=stop_codon:HG00140_ch_T0000311;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2615123	2660074	100	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG00140_ch_T0000312;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_G0000064;transcript_name=HG00140_ch_T0000312;gene_name=ZFY;ID=HG00140_ch_T0000312;Name=ZFY
HG00140_chrY	CAT	exon	2615123	2615180	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG00140_ch_T0000312;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000312;transcript_name=HG00140_ch_T0000312;gene_name=ZFY;ID=exon:HG00140_ch_T0000312:0;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2615181	2633635	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG00140_ch_T0000312;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000312;transcript_name=HG00140_ch_T0000312;gene_name=ZFY;ID=intron:HG00140_ch_T0000312:0;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2633636	2633724	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG00140_ch_T0000312;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000312;transcript_name=HG00140_ch_T0000312;gene_name=ZFY;ID=exon:HG00140_ch_T0000312:1;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2633664	2633724	.	+	0	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG00140_ch_T0000312;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000312;transcript_name=HG00140_ch_T0000312;gene_name=ZFY;ID=CDS:HG00140_ch_T0000312:0;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	2633664	2633666	.	+	0	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG00140_ch_T0000312;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000312;transcript_name=HG00140_ch_T0000312;gene_name=ZFY;ID=start_codon:HG00140_ch_T0000312;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2633725	2654821	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG00140_ch_T0000312;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000312;transcript_name=HG00140_ch_T0000312;gene_name=ZFY;ID=intron:HG00140_ch_T0000312:1;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2654822	2654971	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG00140_ch_T0000312;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000312;transcript_name=HG00140_ch_T0000312;gene_name=ZFY;ID=exon:HG00140_ch_T0000312:2;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2654822	2654971	.	+	2	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG00140_ch_T0000312;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000312;transcript_name=HG00140_ch_T0000312;gene_name=ZFY;ID=CDS:HG00140_ch_T0000312:1;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2654972	2655237	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG00140_ch_T0000312;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000312;transcript_name=HG00140_ch_T0000312;gene_name=ZFY;ID=intron:HG00140_ch_T0000312:2;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2655238	2655381	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG00140_ch_T0000312;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000312;transcript_name=HG00140_ch_T0000312;gene_name=ZFY;ID=exon:HG00140_ch_T0000312:3;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2655238	2655381	.	+	2	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG00140_ch_T0000312;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000312;transcript_name=HG00140_ch_T0000312;gene_name=ZFY;ID=CDS:HG00140_ch_T0000312:2;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2655382	2656396	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG00140_ch_T0000312;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000312;transcript_name=HG00140_ch_T0000312;gene_name=ZFY;ID=intron:HG00140_ch_T0000312:3;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2656397	2656549	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG00140_ch_T0000312;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000312;transcript_name=HG00140_ch_T0000312;gene_name=ZFY;ID=exon:HG00140_ch_T0000312:4;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2656397	2656549	.	+	2	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG00140_ch_T0000312;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000312;transcript_name=HG00140_ch_T0000312;gene_name=ZFY;ID=CDS:HG00140_ch_T0000312:3;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2656550	2657666	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG00140_ch_T0000312;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000312;transcript_name=HG00140_ch_T0000312;gene_name=ZFY;ID=intron:HG00140_ch_T0000312:4;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2657667	2657807	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG00140_ch_T0000312;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000312;transcript_name=HG00140_ch_T0000312;gene_name=ZFY;ID=exon:HG00140_ch_T0000312:5;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2657667	2657807	.	+	2	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG00140_ch_T0000312;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000312;transcript_name=HG00140_ch_T0000312;gene_name=ZFY;ID=CDS:HG00140_ch_T0000312:4;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2657808	2658536	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG00140_ch_T0000312;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000312;transcript_name=HG00140_ch_T0000312;gene_name=ZFY;ID=intron:HG00140_ch_T0000312:5;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2658537	2660074	.	+	.	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG00140_ch_T0000312;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000312;transcript_name=HG00140_ch_T0000312;gene_name=ZFY;ID=exon:HG00140_ch_T0000312:6;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2658537	2659720	.	+	2	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG00140_ch_T0000312;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000312;transcript_name=HG00140_ch_T0000312;gene_name=ZFY;ID=CDS:HG00140_ch_T0000312:5;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	2659718	2659720	.	+	0	source_transcript=ENST00000625061.3;source_transcript_name=ZFY-207;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000625061.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000625061.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000625061.3,ENST00000625061.3;transcript_id=HG00140_ch_T0000312;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000312;transcript_name=HG00140_ch_T0000312;gene_name=ZFY;ID=stop_codon:HG00140_ch_T0000312;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2615234	2657780	1000	+	.	source_transcript=ENST00000469869.1;source_transcript_name=ZFY-205;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469869.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469869.1;transcript_score=299.853;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000469869.1,ENST00000469869.1;transcript_id=HG00140_ch_T0000313;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_G0000064;transcript_name=HG00140_ch_T0000313;gene_name=ZFY;ID=HG00140_ch_T0000313;Name=ZFY
HG00140_chrY	CAT	exon	2615234	2615503	.	+	.	source_transcript=ENST00000469869.1;source_transcript_name=ZFY-205;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469869.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469869.1;transcript_score=299.853;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000469869.1,ENST00000469869.1;transcript_id=HG00140_ch_T0000313;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000313;transcript_name=HG00140_ch_T0000313;gene_name=ZFY;ID=exon:HG00140_ch_T0000313:0;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2615504	2654821	.	+	.	source_transcript=ENST00000469869.1;source_transcript_name=ZFY-205;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469869.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469869.1;transcript_score=299.853;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000469869.1,ENST00000469869.1;transcript_id=HG00140_ch_T0000313;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000313;transcript_name=HG00140_ch_T0000313;gene_name=ZFY;ID=intron:HG00140_ch_T0000313:0;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2654822	2654971	.	+	.	source_transcript=ENST00000469869.1;source_transcript_name=ZFY-205;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469869.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469869.1;transcript_score=299.853;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000469869.1,ENST00000469869.1;transcript_id=HG00140_ch_T0000313;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000313;transcript_name=HG00140_ch_T0000313;gene_name=ZFY;ID=exon:HG00140_ch_T0000313:1;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2654972	2655237	.	+	.	source_transcript=ENST00000469869.1;source_transcript_name=ZFY-205;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469869.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469869.1;transcript_score=299.853;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000469869.1,ENST00000469869.1;transcript_id=HG00140_ch_T0000313;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000313;transcript_name=HG00140_ch_T0000313;gene_name=ZFY;ID=intron:HG00140_ch_T0000313:1;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2655238	2655381	.	+	.	source_transcript=ENST00000469869.1;source_transcript_name=ZFY-205;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469869.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469869.1;transcript_score=299.853;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000469869.1,ENST00000469869.1;transcript_id=HG00140_ch_T0000313;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000313;transcript_name=HG00140_ch_T0000313;gene_name=ZFY;ID=exon:HG00140_ch_T0000313:2;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2655382	2657666	.	+	.	source_transcript=ENST00000469869.1;source_transcript_name=ZFY-205;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469869.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469869.1;transcript_score=299.853;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000469869.1,ENST00000469869.1;transcript_id=HG00140_ch_T0000313;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000313;transcript_name=HG00140_ch_T0000313;gene_name=ZFY;ID=intron:HG00140_ch_T0000313:2;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2657667	2657780	.	+	.	source_transcript=ENST00000469869.1;source_transcript_name=ZFY-205;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469869.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469869.1;transcript_score=299.853;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000469869.1,ENST00000469869.1;transcript_id=HG00140_ch_T0000313;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000313;transcript_name=HG00140_ch_T0000313;gene_name=ZFY;ID=exon:HG00140_ch_T0000313:3;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2615239	2641013	100	+	.	source_transcript=ENST00000443793.1;source_transcript_name=ZFY-203;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000443793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443793.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000443793.1,ENST00000443793.1;transcript_id=HG00140_ch_T0000314;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_G0000064;transcript_name=HG00140_ch_T0000314;gene_name=ZFY;ID=HG00140_ch_T0000314;Name=ZFY
HG00140_chrY	CAT	exon	2615239	2615503	.	+	.	source_transcript=ENST00000443793.1;source_transcript_name=ZFY-203;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000443793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443793.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000443793.1,ENST00000443793.1;transcript_id=HG00140_ch_T0000314;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000314;transcript_name=HG00140_ch_T0000314;gene_name=ZFY;ID=exon:HG00140_ch_T0000314:0;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2615504	2633635	.	+	.	source_transcript=ENST00000443793.1;source_transcript_name=ZFY-203;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000443793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443793.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000443793.1,ENST00000443793.1;transcript_id=HG00140_ch_T0000314;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000314;transcript_name=HG00140_ch_T0000314;gene_name=ZFY;ID=intron:HG00140_ch_T0000314:0;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2633636	2633724	.	+	.	source_transcript=ENST00000443793.1;source_transcript_name=ZFY-203;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000443793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443793.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000443793.1,ENST00000443793.1;transcript_id=HG00140_ch_T0000314;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000314;transcript_name=HG00140_ch_T0000314;gene_name=ZFY;ID=exon:HG00140_ch_T0000314:1;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2633664	2633724	.	+	0	source_transcript=ENST00000443793.1;source_transcript_name=ZFY-203;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000443793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443793.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000443793.1,ENST00000443793.1;transcript_id=HG00140_ch_T0000314;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000314;transcript_name=HG00140_ch_T0000314;gene_name=ZFY;ID=CDS:HG00140_ch_T0000314:0;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	2633664	2633666	.	+	0	source_transcript=ENST00000443793.1;source_transcript_name=ZFY-203;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000443793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443793.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000443793.1,ENST00000443793.1;transcript_id=HG00140_ch_T0000314;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000314;transcript_name=HG00140_ch_T0000314;gene_name=ZFY;ID=start_codon:HG00140_ch_T0000314;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2633725	2640800	.	+	.	source_transcript=ENST00000443793.1;source_transcript_name=ZFY-203;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000443793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443793.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000443793.1,ENST00000443793.1;transcript_id=HG00140_ch_T0000314;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000314;transcript_name=HG00140_ch_T0000314;gene_name=ZFY;ID=intron:HG00140_ch_T0000314:1;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2640801	2641013	.	+	.	source_transcript=ENST00000443793.1;source_transcript_name=ZFY-203;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000443793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443793.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000443793.1,ENST00000443793.1;transcript_id=HG00140_ch_T0000314;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000314;transcript_name=HG00140_ch_T0000314;gene_name=ZFY;ID=exon:HG00140_ch_T0000314:2;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2640801	2641013	.	+	2	source_transcript=ENST00000443793.1;source_transcript_name=ZFY-203;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000443793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443793.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000443793.1,ENST00000443793.1;transcript_id=HG00140_ch_T0000314;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000314;transcript_name=HG00140_ch_T0000314;gene_name=ZFY;ID=CDS:HG00140_ch_T0000314:1;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2615385	2660873	100	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG00140_ch_T0000315;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_G0000064;transcript_name=HG00140_ch_T0000315;gene_name=ZFY;ID=HG00140_ch_T0000315;Name=ZFY
HG00140_chrY	CAT	exon	2615385	2615503	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG00140_ch_T0000315;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000315;transcript_name=HG00140_ch_T0000315;gene_name=ZFY;ID=exon:HG00140_ch_T0000315:0;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2615504	2640800	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG00140_ch_T0000315;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000315;transcript_name=HG00140_ch_T0000315;gene_name=ZFY;ID=intron:HG00140_ch_T0000315:0;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2640801	2641373	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG00140_ch_T0000315;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000315;transcript_name=HG00140_ch_T0000315;gene_name=ZFY;ID=exon:HG00140_ch_T0000315:1;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2640818	2641373	.	+	0	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG00140_ch_T0000315;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000315;transcript_name=HG00140_ch_T0000315;gene_name=ZFY;ID=CDS:HG00140_ch_T0000315:0;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	2640818	2640820	.	+	0	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG00140_ch_T0000315;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000315;transcript_name=HG00140_ch_T0000315;gene_name=ZFY;ID=start_codon:HG00140_ch_T0000315;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2641374	2654821	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG00140_ch_T0000315;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000315;transcript_name=HG00140_ch_T0000315;gene_name=ZFY;ID=intron:HG00140_ch_T0000315:1;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2654822	2654971	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG00140_ch_T0000315;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000315;transcript_name=HG00140_ch_T0000315;gene_name=ZFY;ID=exon:HG00140_ch_T0000315:2;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2654822	2654971	.	+	2	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG00140_ch_T0000315;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000315;transcript_name=HG00140_ch_T0000315;gene_name=ZFY;ID=CDS:HG00140_ch_T0000315:1;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2654972	2655237	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG00140_ch_T0000315;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000315;transcript_name=HG00140_ch_T0000315;gene_name=ZFY;ID=intron:HG00140_ch_T0000315:2;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2655238	2655381	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG00140_ch_T0000315;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000315;transcript_name=HG00140_ch_T0000315;gene_name=ZFY;ID=exon:HG00140_ch_T0000315:3;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2655238	2655381	.	+	2	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG00140_ch_T0000315;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000315;transcript_name=HG00140_ch_T0000315;gene_name=ZFY;ID=CDS:HG00140_ch_T0000315:2;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2655382	2657666	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG00140_ch_T0000315;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000315;transcript_name=HG00140_ch_T0000315;gene_name=ZFY;ID=intron:HG00140_ch_T0000315:3;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2657667	2657807	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG00140_ch_T0000315;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000315;transcript_name=HG00140_ch_T0000315;gene_name=ZFY;ID=exon:HG00140_ch_T0000315:4;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2657667	2657807	.	+	2	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG00140_ch_T0000315;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000315;transcript_name=HG00140_ch_T0000315;gene_name=ZFY;ID=CDS:HG00140_ch_T0000315:3;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2657808	2658536	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG00140_ch_T0000315;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000315;transcript_name=HG00140_ch_T0000315;gene_name=ZFY;ID=intron:HG00140_ch_T0000315:4;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2658537	2660873	.	+	.	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG00140_ch_T0000315;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000315;transcript_name=HG00140_ch_T0000315;gene_name=ZFY;ID=exon:HG00140_ch_T0000315:5;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	2658537	2659720	.	+	2	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG00140_ch_T0000315;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000315;transcript_name=HG00140_ch_T0000315;gene_name=ZFY;ID=CDS:HG00140_ch_T0000315:4;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	2659718	2659720	.	+	0	source_transcript=ENST00000449237.4;source_transcript_name=ZFY-204;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449237.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000449237.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000449237.4,ENST00000449237.4;transcript_id=HG00140_ch_T0000315;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000315;transcript_name=HG00140_ch_T0000315;gene_name=ZFY;ID=stop_codon:HG00140_ch_T0000315;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2657546	2659077	1000	+	.	source_transcript=ENST00000478783.1;source_transcript_name=ZFY-206;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000478783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000478783.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000478783.1,ENST00000478783.1;transcript_id=HG00140_ch_T0000317;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_G0000064;transcript_name=HG00140_ch_T0000317;gene_name=ZFY;ID=HG00140_ch_T0000317;Name=ZFY
HG00140_chrY	CAT	exon	2657546	2657807	.	+	.	source_transcript=ENST00000478783.1;source_transcript_name=ZFY-206;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000478783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000478783.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000478783.1,ENST00000478783.1;transcript_id=HG00140_ch_T0000317;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000317;transcript_name=HG00140_ch_T0000317;gene_name=ZFY;ID=exon:HG00140_ch_T0000317:0;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2657808	2658536	.	+	.	source_transcript=ENST00000478783.1;source_transcript_name=ZFY-206;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000478783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000478783.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000478783.1,ENST00000478783.1;transcript_id=HG00140_ch_T0000317;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000317;transcript_name=HG00140_ch_T0000317;gene_name=ZFY;ID=intron:HG00140_ch_T0000317:0;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2658537	2659077	.	+	.	source_transcript=ENST00000478783.1;source_transcript_name=ZFY-206;source_gene=ENSG00000067646.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067646.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000478783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000478783.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=ENST00000478783.1,ENST00000478783.1;transcript_id=HG00140_ch_T0000317;gene_id=HG00140_ch_G0000064;Parent=HG00140_ch_T0000317;transcript_name=HG00140_ch_T0000317;gene_name=ZFY;ID=exon:HG00140_ch_T0000317:1;Name=ZFY;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	2646556	2682299	.	-	.	source_gene_common_name=ZFY-AS1;source_gene=ENSG00000233070.2;alternative_source_transcripts=ENST00000417305.2,ENST00000417305.2;gene_id=HG00140_ch_G0000065;gene_biotype=lncRNA;gene_name=ZFY-AS1;gene_sources=liftoff;ID=HG00140_ch_G0000065;Name=ZFY-AS1
HG00140_chrY	CAT	transcript	2646556	2682546	1000	-	.	source_transcript=ENST00000417305.2;source_transcript_name=ZFY-AS1-201;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417305.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417305.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000417305.2,ENST00000417305.2;transcript_id=HG00140_ch_T0000316;gene_id=HG00140_ch_G0000065;Parent=HG00140_ch_G0000065;transcript_name=HG00140_ch_T0000316;gene_name=ZFY-AS1;ID=HG00140_ch_T0000316;Name=ZFY-AS1
HG00140_chrY	CAT	exon	2646556	2646666	.	-	.	source_transcript=ENST00000417305.2;source_transcript_name=ZFY-AS1-201;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417305.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417305.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000417305.2,ENST00000417305.2;transcript_id=HG00140_ch_T0000316;gene_id=HG00140_ch_G0000065;Parent=HG00140_ch_T0000316;transcript_name=HG00140_ch_T0000316;gene_name=ZFY-AS1;ID=exon:HG00140_ch_T0000316:0;Name=ZFY-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2646667	2661564	.	-	.	source_transcript=ENST00000417305.2;source_transcript_name=ZFY-AS1-201;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417305.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417305.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000417305.2,ENST00000417305.2;transcript_id=HG00140_ch_T0000316;gene_id=HG00140_ch_G0000065;Parent=HG00140_ch_T0000316;transcript_name=HG00140_ch_T0000316;gene_name=ZFY-AS1;ID=intron:HG00140_ch_T0000316:0;Name=ZFY-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2661565	2661654	.	-	.	source_transcript=ENST00000417305.2;source_transcript_name=ZFY-AS1-201;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417305.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417305.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000417305.2,ENST00000417305.2;transcript_id=HG00140_ch_T0000316;gene_id=HG00140_ch_G0000065;Parent=HG00140_ch_T0000316;transcript_name=HG00140_ch_T0000316;gene_name=ZFY-AS1;ID=exon:HG00140_ch_T0000316:1;Name=ZFY-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2661655	2682040	.	-	.	source_transcript=ENST00000417305.2;source_transcript_name=ZFY-AS1-201;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417305.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417305.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000417305.2,ENST00000417305.2;transcript_id=HG00140_ch_T0000316;gene_id=HG00140_ch_G0000065;Parent=HG00140_ch_T0000316;transcript_name=HG00140_ch_T0000316;gene_name=ZFY-AS1;ID=intron:HG00140_ch_T0000316:1;Name=ZFY-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2682041	2682546	.	-	.	source_transcript=ENST00000417305.2;source_transcript_name=ZFY-AS1-201;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417305.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417305.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000417305.2,ENST00000417305.2;transcript_id=HG00140_ch_T0000316;gene_id=HG00140_ch_G0000065;Parent=HG00140_ch_T0000316;transcript_name=HG00140_ch_T0000316;gene_name=ZFY-AS1;ID=exon:HG00140_ch_T0000316:2;Name=ZFY-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2681354	2682529	1000	-	.	source_transcript=ENST00000758822.1;source_transcript_name=ZFY-AS1-203;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000758822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000758822.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000758822.1,ENST00000758822.1;transcript_id=HG00140_ch_T0000319;gene_id=HG00140_ch_G0000065;Parent=HG00140_ch_G0000065;transcript_name=HG00140_ch_T0000319;gene_name=ZFY-AS1;ID=HG00140_ch_T0000319;Name=ZFY-AS1
HG00140_chrY	CAT	exon	2681354	2681651	.	-	.	source_transcript=ENST00000758822.1;source_transcript_name=ZFY-AS1-203;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000758822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000758822.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000758822.1,ENST00000758822.1;transcript_id=HG00140_ch_T0000319;gene_id=HG00140_ch_G0000065;Parent=HG00140_ch_T0000319;transcript_name=HG00140_ch_T0000319;gene_name=ZFY-AS1;ID=exon:HG00140_ch_T0000319:0;Name=ZFY-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2681652	2682040	.	-	.	source_transcript=ENST00000758822.1;source_transcript_name=ZFY-AS1-203;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000758822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000758822.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000758822.1,ENST00000758822.1;transcript_id=HG00140_ch_T0000319;gene_id=HG00140_ch_G0000065;Parent=HG00140_ch_T0000319;transcript_name=HG00140_ch_T0000319;gene_name=ZFY-AS1;ID=intron:HG00140_ch_T0000319:0;Name=ZFY-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2682041	2682529	.	-	.	source_transcript=ENST00000758822.1;source_transcript_name=ZFY-AS1-203;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000758822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000758822.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000758822.1,ENST00000758822.1;transcript_id=HG00140_ch_T0000319;gene_id=HG00140_ch_G0000065;Parent=HG00140_ch_T0000319;transcript_name=HG00140_ch_T0000319;gene_name=ZFY-AS1;ID=exon:HG00140_ch_T0000319:1;Name=ZFY-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2681356	2682299	1000	-	.	source_transcript=ENST00000431145.1;source_transcript_name=ZFY-AS1-202;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000431145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431145.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000431145.1,ENST00000431145.1;transcript_id=HG00140_ch_T0000320;gene_id=HG00140_ch_G0000065;Parent=HG00140_ch_G0000065;transcript_name=HG00140_ch_T0000320;gene_name=ZFY-AS1;ID=HG00140_ch_T0000320;Name=ZFY-AS1
HG00140_chrY	CAT	exon	2681356	2681651	.	-	.	source_transcript=ENST00000431145.1;source_transcript_name=ZFY-AS1-202;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000431145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431145.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000431145.1,ENST00000431145.1;transcript_id=HG00140_ch_T0000320;gene_id=HG00140_ch_G0000065;Parent=HG00140_ch_T0000320;transcript_name=HG00140_ch_T0000320;gene_name=ZFY-AS1;ID=exon:HG00140_ch_T0000320:0;Name=ZFY-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2681652	2682040	.	-	.	source_transcript=ENST00000431145.1;source_transcript_name=ZFY-AS1-202;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000431145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431145.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000431145.1,ENST00000431145.1;transcript_id=HG00140_ch_T0000320;gene_id=HG00140_ch_G0000065;Parent=HG00140_ch_T0000320;transcript_name=HG00140_ch_T0000320;gene_name=ZFY-AS1;ID=intron:HG00140_ch_T0000320:0;Name=ZFY-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2682041	2682129	.	-	.	source_transcript=ENST00000431145.1;source_transcript_name=ZFY-AS1-202;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000431145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431145.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000431145.1,ENST00000431145.1;transcript_id=HG00140_ch_T0000320;gene_id=HG00140_ch_G0000065;Parent=HG00140_ch_T0000320;transcript_name=HG00140_ch_T0000320;gene_name=ZFY-AS1;ID=exon:HG00140_ch_T0000320:1;Name=ZFY-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2682130	2682265	.	-	.	source_transcript=ENST00000431145.1;source_transcript_name=ZFY-AS1-202;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000431145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431145.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000431145.1,ENST00000431145.1;transcript_id=HG00140_ch_T0000320;gene_id=HG00140_ch_G0000065;Parent=HG00140_ch_T0000320;transcript_name=HG00140_ch_T0000320;gene_name=ZFY-AS1;ID=intron:HG00140_ch_T0000320:1;Name=ZFY-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2682266	2682299	.	-	.	source_transcript=ENST00000431145.1;source_transcript_name=ZFY-AS1-202;source_gene=ENSG00000233070.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233070.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000431145.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431145.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=ENST00000431145.1,ENST00000431145.1;transcript_id=HG00140_ch_T0000320;gene_id=HG00140_ch_G0000065;Parent=HG00140_ch_T0000320;transcript_name=HG00140_ch_T0000320;gene_name=ZFY-AS1;ID=exon:HG00140_ch_T0000320:2;Name=ZFY-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	2674795	2675001	.	-	.	source_gene_common_name=EEF1A1P41;source_gene=ENSG00000223600.1;alternative_source_transcripts=ENST00000414667.1,ENST00000414667.1;gene_id=HG00140_ch_G0000066;gene_biotype=processed_pseudogene;gene_name=EEF1A1P41;gene_sources=liftoff;ID=HG00140_ch_G0000066;Name=EEF1A1P41
HG00140_chrY	CAT	transcript	2674795	2675001	1000	-	.	source_transcript=ENST00000414667.1;source_transcript_name=EEF1A1P41-201;source_gene=ENSG00000223600.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000223600.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000414667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414667.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EEF1A1P41;alternative_source_transcripts=ENST00000414667.1,ENST00000414667.1;transcript_id=HG00140_ch_T0000318;gene_id=HG00140_ch_G0000066;Parent=HG00140_ch_G0000066;transcript_name=HG00140_ch_T0000318;gene_name=EEF1A1P41;ID=HG00140_ch_T0000318;Name=EEF1A1P41
HG00140_chrY	CAT	exon	2674795	2675001	.	-	.	source_transcript=ENST00000414667.1;source_transcript_name=EEF1A1P41-201;source_gene=ENSG00000223600.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000223600.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000414667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414667.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EEF1A1P41;alternative_source_transcripts=ENST00000414667.1,ENST00000414667.1;transcript_id=HG00140_ch_T0000318;gene_id=HG00140_ch_G0000066;Parent=HG00140_ch_T0000318;transcript_name=HG00140_ch_T0000318;gene_name=EEF1A1P41;ID=exon:HG00140_ch_T0000318:0;Name=EEF1A1P41;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	2682615	2880240	.	+	.	source_gene_common_name=LINC00278;source_gene=ENSG00000231535.9;alternative_source_transcripts=ENST00000654222.1,ENST00000654222.1;gene_id=HG00140_ch_G0000067;gene_biotype=lncRNA;gene_name=LINC00278;gene_sources=liftoff;ID=HG00140_ch_G0000067;Name=LINC00278
HG00140_chrY	CAT	transcript	2682615	2683754	1000	+	.	source_transcript=ENST00000654222.1;source_transcript_name=LINC00278-206;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000654222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000654222.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000654222.1,ENST00000654222.1;transcript_id=HG00140_ch_T0000321;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_G0000067;transcript_name=HG00140_ch_T0000321;gene_name=LINC00278;ID=HG00140_ch_T0000321;Name=LINC00278
HG00140_chrY	CAT	exon	2682615	2683754	.	+	.	source_transcript=ENST00000654222.1;source_transcript_name=LINC00278-206;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000654222.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000654222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000654222.1,ENST00000654222.1;transcript_id=HG00140_ch_T0000321;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000321;transcript_name=HG00140_ch_T0000321;gene_name=LINC00278;ID=exon:HG00140_ch_T0000321:0;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2682615	2800350	1000	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=HG00140_ch_T0000322;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_G0000067;transcript_name=HG00140_ch_T0000322;gene_name=LINC00278;ID=HG00140_ch_T0000322;Name=LINC00278
HG00140_chrY	CAT	exon	2682615	2682945	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=HG00140_ch_T0000322;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000322;transcript_name=HG00140_ch_T0000322;gene_name=LINC00278;ID=exon:HG00140_ch_T0000322:0;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2682946	2738381	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=HG00140_ch_T0000322;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000322;transcript_name=HG00140_ch_T0000322;gene_name=LINC00278;ID=intron:HG00140_ch_T0000322:0;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2738382	2738509	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=HG00140_ch_T0000322;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000322;transcript_name=HG00140_ch_T0000322;gene_name=LINC00278;ID=exon:HG00140_ch_T0000322:1;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2738510	2759016	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=HG00140_ch_T0000322;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000322;transcript_name=HG00140_ch_T0000322;gene_name=LINC00278;ID=intron:HG00140_ch_T0000322:1;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2759017	2759074	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=HG00140_ch_T0000322;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000322;transcript_name=HG00140_ch_T0000322;gene_name=LINC00278;ID=exon:HG00140_ch_T0000322:2;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2759075	2776730	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=HG00140_ch_T0000322;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000322;transcript_name=HG00140_ch_T0000322;gene_name=LINC00278;ID=intron:HG00140_ch_T0000322:2;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2776731	2776789	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=HG00140_ch_T0000322;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000322;transcript_name=HG00140_ch_T0000322;gene_name=LINC00278;ID=exon:HG00140_ch_T0000322:3;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2776790	2791017	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=HG00140_ch_T0000322;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000322;transcript_name=HG00140_ch_T0000322;gene_name=LINC00278;ID=intron:HG00140_ch_T0000322:3;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2791018	2791083	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=HG00140_ch_T0000322;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000322;transcript_name=HG00140_ch_T0000322;gene_name=LINC00278;ID=exon:HG00140_ch_T0000322:4;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2791084	2800166	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=HG00140_ch_T0000322;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000322;transcript_name=HG00140_ch_T0000322;gene_name=LINC00278;ID=intron:HG00140_ch_T0000322:4;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2800167	2800350	.	+	.	source_transcript=ENST00000655607.2;source_transcript_name=LINC00278-207;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000655607.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000655607.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000655607.2,ENST00000655607.2;transcript_id=HG00140_ch_T0000322;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000322;transcript_name=HG00140_ch_T0000322;gene_name=LINC00278;ID=exon:HG00140_ch_T0000322:5;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2682615	2880240	1000	+	.	source_transcript=ENST00000665487.1;source_transcript_name=LINC00278-208;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000665487.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000665487.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000665487.1,ENST00000665487.1;transcript_id=HG00140_ch_T0000323;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_G0000067;transcript_name=HG00140_ch_T0000323;gene_name=LINC00278;ID=HG00140_ch_T0000323;Name=LINC00278
HG00140_chrY	CAT	exon	2682615	2682945	.	+	.	source_transcript=ENST00000665487.1;source_transcript_name=LINC00278-208;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000665487.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000665487.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000665487.1,ENST00000665487.1;transcript_id=HG00140_ch_T0000323;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000323;transcript_name=HG00140_ch_T0000323;gene_name=LINC00278;ID=exon:HG00140_ch_T0000323:0;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2682946	2879230	.	+	.	source_transcript=ENST00000665487.1;source_transcript_name=LINC00278-208;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000665487.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000665487.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000665487.1,ENST00000665487.1;transcript_id=HG00140_ch_T0000323;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000323;transcript_name=HG00140_ch_T0000323;gene_name=LINC00278;ID=intron:HG00140_ch_T0000323:0;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2879231	2880240	.	+	.	source_transcript=ENST00000665487.1;source_transcript_name=LINC00278-208;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000665487.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000665487.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000665487.1,ENST00000665487.1;transcript_id=HG00140_ch_T0000323;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000323;transcript_name=HG00140_ch_T0000323;gene_name=LINC00278;ID=exon:HG00140_ch_T0000323:1;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2682622	2777554	1000	+	.	source_transcript=ENST00000444263.6;source_transcript_name=LINC00278-202;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444263.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000444263.6;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000444263.6,ENST00000444263.6;transcript_id=HG00140_ch_T0000324;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_G0000067;transcript_name=HG00140_ch_T0000324;gene_name=LINC00278;ID=HG00140_ch_T0000324;Name=LINC00278
HG00140_chrY	CAT	exon	2682622	2682945	.	+	.	source_transcript=ENST00000444263.6;source_transcript_name=LINC00278-202;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444263.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000444263.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000444263.6,ENST00000444263.6;transcript_id=HG00140_ch_T0000324;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000324;transcript_name=HG00140_ch_T0000324;gene_name=LINC00278;ID=exon:HG00140_ch_T0000324:0;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2682946	2759016	.	+	.	source_transcript=ENST00000444263.6;source_transcript_name=LINC00278-202;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444263.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000444263.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000444263.6,ENST00000444263.6;transcript_id=HG00140_ch_T0000324;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000324;transcript_name=HG00140_ch_T0000324;gene_name=LINC00278;ID=intron:HG00140_ch_T0000324:0;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2759017	2759074	.	+	.	source_transcript=ENST00000444263.6;source_transcript_name=LINC00278-202;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444263.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000444263.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000444263.6,ENST00000444263.6;transcript_id=HG00140_ch_T0000324;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000324;transcript_name=HG00140_ch_T0000324;gene_name=LINC00278;ID=exon:HG00140_ch_T0000324:1;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2759075	2776727	.	+	.	source_transcript=ENST00000444263.6;source_transcript_name=LINC00278-202;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444263.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000444263.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000444263.6,ENST00000444263.6;transcript_id=HG00140_ch_T0000324;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000324;transcript_name=HG00140_ch_T0000324;gene_name=LINC00278;ID=intron:HG00140_ch_T0000324:1;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2776728	2777554	.	+	.	source_transcript=ENST00000444263.6;source_transcript_name=LINC00278-202;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444263.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000444263.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000444263.6,ENST00000444263.6;transcript_id=HG00140_ch_T0000324;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000324;transcript_name=HG00140_ch_T0000324;gene_name=LINC00278;ID=exon:HG00140_ch_T0000324:2;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2682622	2880240	1000	+	.	source_transcript=ENST00000651090.1;source_transcript_name=LINC00278-203;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651090.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000651090.1,ENST00000651090.1;transcript_id=HG00140_ch_T0000325;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_G0000067;transcript_name=HG00140_ch_T0000325;gene_name=LINC00278;ID=HG00140_ch_T0000325;Name=LINC00278
HG00140_chrY	CAT	exon	2682622	2682945	.	+	.	source_transcript=ENST00000651090.1;source_transcript_name=LINC00278-203;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651090.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000651090.1,ENST00000651090.1;transcript_id=HG00140_ch_T0000325;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000325;transcript_name=HG00140_ch_T0000325;gene_name=LINC00278;ID=exon:HG00140_ch_T0000325:0;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2682946	2738381	.	+	.	source_transcript=ENST00000651090.1;source_transcript_name=LINC00278-203;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651090.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000651090.1,ENST00000651090.1;transcript_id=HG00140_ch_T0000325;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000325;transcript_name=HG00140_ch_T0000325;gene_name=LINC00278;ID=intron:HG00140_ch_T0000325:0;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2738382	2738509	.	+	.	source_transcript=ENST00000651090.1;source_transcript_name=LINC00278-203;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651090.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000651090.1,ENST00000651090.1;transcript_id=HG00140_ch_T0000325;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000325;transcript_name=HG00140_ch_T0000325;gene_name=LINC00278;ID=exon:HG00140_ch_T0000325:1;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2738510	2759016	.	+	.	source_transcript=ENST00000651090.1;source_transcript_name=LINC00278-203;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651090.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000651090.1,ENST00000651090.1;transcript_id=HG00140_ch_T0000325;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000325;transcript_name=HG00140_ch_T0000325;gene_name=LINC00278;ID=intron:HG00140_ch_T0000325:1;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2759017	2759074	.	+	.	source_transcript=ENST00000651090.1;source_transcript_name=LINC00278-203;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651090.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000651090.1,ENST00000651090.1;transcript_id=HG00140_ch_T0000325;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000325;transcript_name=HG00140_ch_T0000325;gene_name=LINC00278;ID=exon:HG00140_ch_T0000325:2;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2759075	2776727	.	+	.	source_transcript=ENST00000651090.1;source_transcript_name=LINC00278-203;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651090.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000651090.1,ENST00000651090.1;transcript_id=HG00140_ch_T0000325;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000325;transcript_name=HG00140_ch_T0000325;gene_name=LINC00278;ID=intron:HG00140_ch_T0000325:2;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2776728	2776789	.	+	.	source_transcript=ENST00000651090.1;source_transcript_name=LINC00278-203;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651090.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000651090.1,ENST00000651090.1;transcript_id=HG00140_ch_T0000325;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000325;transcript_name=HG00140_ch_T0000325;gene_name=LINC00278;ID=exon:HG00140_ch_T0000325:3;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2776790	2879230	.	+	.	source_transcript=ENST00000651090.1;source_transcript_name=LINC00278-203;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651090.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000651090.1,ENST00000651090.1;transcript_id=HG00140_ch_T0000325;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000325;transcript_name=HG00140_ch_T0000325;gene_name=LINC00278;ID=intron:HG00140_ch_T0000325:3;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2879231	2880240	.	+	.	source_transcript=ENST00000651090.1;source_transcript_name=LINC00278-203;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651090.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000651090.1,ENST00000651090.1;transcript_id=HG00140_ch_T0000325;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000325;transcript_name=HG00140_ch_T0000325;gene_name=LINC00278;ID=exon:HG00140_ch_T0000325:4;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2682622	2800436	1000	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=HG00140_ch_T0000326;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_G0000067;transcript_name=HG00140_ch_T0000326;gene_name=LINC00278;ID=HG00140_ch_T0000326;Name=LINC00278
HG00140_chrY	CAT	exon	2682622	2682945	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=HG00140_ch_T0000326;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000326;transcript_name=HG00140_ch_T0000326;gene_name=LINC00278;ID=exon:HG00140_ch_T0000326:0;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2682946	2759016	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=HG00140_ch_T0000326;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000326;transcript_name=HG00140_ch_T0000326;gene_name=LINC00278;ID=intron:HG00140_ch_T0000326:0;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2759017	2759074	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=HG00140_ch_T0000326;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000326;transcript_name=HG00140_ch_T0000326;gene_name=LINC00278;ID=exon:HG00140_ch_T0000326:1;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2759075	2776727	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=HG00140_ch_T0000326;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000326;transcript_name=HG00140_ch_T0000326;gene_name=LINC00278;ID=intron:HG00140_ch_T0000326:1;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2776728	2776789	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=HG00140_ch_T0000326;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000326;transcript_name=HG00140_ch_T0000326;gene_name=LINC00278;ID=exon:HG00140_ch_T0000326:2;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2776790	2781817	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=HG00140_ch_T0000326;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000326;transcript_name=HG00140_ch_T0000326;gene_name=LINC00278;ID=intron:HG00140_ch_T0000326:2;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2781818	2781927	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=HG00140_ch_T0000326;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000326;transcript_name=HG00140_ch_T0000326;gene_name=LINC00278;ID=exon:HG00140_ch_T0000326:3;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2781928	2791017	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=HG00140_ch_T0000326;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000326;transcript_name=HG00140_ch_T0000326;gene_name=LINC00278;ID=intron:HG00140_ch_T0000326:3;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2791018	2791083	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=HG00140_ch_T0000326;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000326;transcript_name=HG00140_ch_T0000326;gene_name=LINC00278;ID=exon:HG00140_ch_T0000326:4;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2791084	2800166	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=HG00140_ch_T0000326;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000326;transcript_name=HG00140_ch_T0000326;gene_name=LINC00278;ID=intron:HG00140_ch_T0000326:4;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2800167	2800436	.	+	.	source_transcript=ENST00000652068.1;source_transcript_name=LINC00278-204;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652068.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652068.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000652068.1,ENST00000652068.1;transcript_id=HG00140_ch_T0000326;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000326;transcript_name=HG00140_ch_T0000326;gene_name=LINC00278;ID=exon:HG00140_ch_T0000326:5;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2682622	2739969	1000	+	.	source_transcript=ENST00000685199.2;source_transcript_name=LINC00278-209;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000685199.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000685199.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000685199.2,ENST00000685199.2;transcript_id=HG00140_ch_T0000327;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_G0000067;transcript_name=HG00140_ch_T0000327;gene_name=LINC00278;ID=HG00140_ch_T0000327;Name=LINC00278
HG00140_chrY	CAT	exon	2682622	2682945	.	+	.	source_transcript=ENST00000685199.2;source_transcript_name=LINC00278-209;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000685199.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000685199.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000685199.2,ENST00000685199.2;transcript_id=HG00140_ch_T0000327;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000327;transcript_name=HG00140_ch_T0000327;gene_name=LINC00278;ID=exon:HG00140_ch_T0000327:0;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2682946	2738381	.	+	.	source_transcript=ENST00000685199.2;source_transcript_name=LINC00278-209;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000685199.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000685199.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000685199.2,ENST00000685199.2;transcript_id=HG00140_ch_T0000327;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000327;transcript_name=HG00140_ch_T0000327;gene_name=LINC00278;ID=intron:HG00140_ch_T0000327:0;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2738382	2739969	.	+	.	source_transcript=ENST00000685199.2;source_transcript_name=LINC00278-209;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000685199.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000685199.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000685199.2,ENST00000685199.2;transcript_id=HG00140_ch_T0000327;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000327;transcript_name=HG00140_ch_T0000327;gene_name=LINC00278;ID=exon:HG00140_ch_T0000327:1;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2682627	2793592	1000	+	.	source_transcript=ENST00000803192.1;source_transcript_name=LINC00278-213;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803192.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803192.1,ENST00000803192.1;transcript_id=HG00140_ch_T0000328;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_G0000067;transcript_name=HG00140_ch_T0000328;gene_name=LINC00278;ID=HG00140_ch_T0000328;Name=LINC00278
HG00140_chrY	CAT	exon	2682627	2682945	.	+	.	source_transcript=ENST00000803192.1;source_transcript_name=LINC00278-213;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803192.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803192.1,ENST00000803192.1;transcript_id=HG00140_ch_T0000328;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000328;transcript_name=HG00140_ch_T0000328;gene_name=LINC00278;ID=exon:HG00140_ch_T0000328:0;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2682946	2738381	.	+	.	source_transcript=ENST00000803192.1;source_transcript_name=LINC00278-213;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803192.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803192.1,ENST00000803192.1;transcript_id=HG00140_ch_T0000328;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000328;transcript_name=HG00140_ch_T0000328;gene_name=LINC00278;ID=intron:HG00140_ch_T0000328:0;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2738382	2738509	.	+	.	source_transcript=ENST00000803192.1;source_transcript_name=LINC00278-213;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803192.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803192.1,ENST00000803192.1;transcript_id=HG00140_ch_T0000328;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000328;transcript_name=HG00140_ch_T0000328;gene_name=LINC00278;ID=exon:HG00140_ch_T0000328:1;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2738510	2776730	.	+	.	source_transcript=ENST00000803192.1;source_transcript_name=LINC00278-213;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803192.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803192.1,ENST00000803192.1;transcript_id=HG00140_ch_T0000328;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000328;transcript_name=HG00140_ch_T0000328;gene_name=LINC00278;ID=intron:HG00140_ch_T0000328:1;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2776731	2776789	.	+	.	source_transcript=ENST00000803192.1;source_transcript_name=LINC00278-213;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803192.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803192.1,ENST00000803192.1;transcript_id=HG00140_ch_T0000328;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000328;transcript_name=HG00140_ch_T0000328;gene_name=LINC00278;ID=exon:HG00140_ch_T0000328:2;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2776790	2791017	.	+	.	source_transcript=ENST00000803192.1;source_transcript_name=LINC00278-213;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803192.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803192.1,ENST00000803192.1;transcript_id=HG00140_ch_T0000328;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000328;transcript_name=HG00140_ch_T0000328;gene_name=LINC00278;ID=intron:HG00140_ch_T0000328:2;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2791018	2791083	.	+	.	source_transcript=ENST00000803192.1;source_transcript_name=LINC00278-213;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803192.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803192.1,ENST00000803192.1;transcript_id=HG00140_ch_T0000328;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000328;transcript_name=HG00140_ch_T0000328;gene_name=LINC00278;ID=exon:HG00140_ch_T0000328:3;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2791084	2793404	.	+	.	source_transcript=ENST00000803192.1;source_transcript_name=LINC00278-213;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803192.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803192.1,ENST00000803192.1;transcript_id=HG00140_ch_T0000328;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000328;transcript_name=HG00140_ch_T0000328;gene_name=LINC00278;ID=intron:HG00140_ch_T0000328:3;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2793405	2793592	.	+	.	source_transcript=ENST00000803192.1;source_transcript_name=LINC00278-213;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803192.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803192.1,ENST00000803192.1;transcript_id=HG00140_ch_T0000328;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000328;transcript_name=HG00140_ch_T0000328;gene_name=LINC00278;ID=exon:HG00140_ch_T0000328:4;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2682629	2800350	1000	+	.	source_transcript=ENST00000691894.1;source_transcript_name=LINC00278-210;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000691894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691894.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000691894.1,ENST00000691894.1;transcript_id=HG00140_ch_T0000329;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_G0000067;transcript_name=HG00140_ch_T0000329;gene_name=LINC00278;ID=HG00140_ch_T0000329;Name=LINC00278
HG00140_chrY	CAT	exon	2682629	2682945	.	+	.	source_transcript=ENST00000691894.1;source_transcript_name=LINC00278-210;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000691894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000691894.1,ENST00000691894.1;transcript_id=HG00140_ch_T0000329;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000329;transcript_name=HG00140_ch_T0000329;gene_name=LINC00278;ID=exon:HG00140_ch_T0000329:0;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2682946	2738381	.	+	.	source_transcript=ENST00000691894.1;source_transcript_name=LINC00278-210;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000691894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000691894.1,ENST00000691894.1;transcript_id=HG00140_ch_T0000329;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000329;transcript_name=HG00140_ch_T0000329;gene_name=LINC00278;ID=intron:HG00140_ch_T0000329:0;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2738382	2738509	.	+	.	source_transcript=ENST00000691894.1;source_transcript_name=LINC00278-210;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000691894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000691894.1,ENST00000691894.1;transcript_id=HG00140_ch_T0000329;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000329;transcript_name=HG00140_ch_T0000329;gene_name=LINC00278;ID=exon:HG00140_ch_T0000329:1;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2738510	2759016	.	+	.	source_transcript=ENST00000691894.1;source_transcript_name=LINC00278-210;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000691894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000691894.1,ENST00000691894.1;transcript_id=HG00140_ch_T0000329;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000329;transcript_name=HG00140_ch_T0000329;gene_name=LINC00278;ID=intron:HG00140_ch_T0000329:1;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2759017	2759074	.	+	.	source_transcript=ENST00000691894.1;source_transcript_name=LINC00278-210;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000691894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000691894.1,ENST00000691894.1;transcript_id=HG00140_ch_T0000329;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000329;transcript_name=HG00140_ch_T0000329;gene_name=LINC00278;ID=exon:HG00140_ch_T0000329:2;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2759075	2776727	.	+	.	source_transcript=ENST00000691894.1;source_transcript_name=LINC00278-210;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000691894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000691894.1,ENST00000691894.1;transcript_id=HG00140_ch_T0000329;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000329;transcript_name=HG00140_ch_T0000329;gene_name=LINC00278;ID=intron:HG00140_ch_T0000329:2;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2776728	2776789	.	+	.	source_transcript=ENST00000691894.1;source_transcript_name=LINC00278-210;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000691894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000691894.1,ENST00000691894.1;transcript_id=HG00140_ch_T0000329;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000329;transcript_name=HG00140_ch_T0000329;gene_name=LINC00278;ID=exon:HG00140_ch_T0000329:3;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2776790	2800166	.	+	.	source_transcript=ENST00000691894.1;source_transcript_name=LINC00278-210;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000691894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000691894.1,ENST00000691894.1;transcript_id=HG00140_ch_T0000329;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000329;transcript_name=HG00140_ch_T0000329;gene_name=LINC00278;ID=intron:HG00140_ch_T0000329:3;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2800167	2800350	.	+	.	source_transcript=ENST00000691894.1;source_transcript_name=LINC00278-210;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000691894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691894.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000691894.1,ENST00000691894.1;transcript_id=HG00140_ch_T0000329;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000329;transcript_name=HG00140_ch_T0000329;gene_name=LINC00278;ID=exon:HG00140_ch_T0000329:4;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2682629	2840587	1000	+	.	source_transcript=ENST00000803190.1;source_transcript_name=LINC00278-211;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803190.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803190.1,ENST00000803190.1;transcript_id=HG00140_ch_T0000330;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_G0000067;transcript_name=HG00140_ch_T0000330;gene_name=LINC00278;ID=HG00140_ch_T0000330;Name=LINC00278
HG00140_chrY	CAT	exon	2682629	2682945	.	+	.	source_transcript=ENST00000803190.1;source_transcript_name=LINC00278-211;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803190.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803190.1,ENST00000803190.1;transcript_id=HG00140_ch_T0000330;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000330;transcript_name=HG00140_ch_T0000330;gene_name=LINC00278;ID=exon:HG00140_ch_T0000330:0;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2682946	2694630	.	+	.	source_transcript=ENST00000803190.1;source_transcript_name=LINC00278-211;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803190.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803190.1,ENST00000803190.1;transcript_id=HG00140_ch_T0000330;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000330;transcript_name=HG00140_ch_T0000330;gene_name=LINC00278;ID=intron:HG00140_ch_T0000330:0;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2694631	2694813	.	+	.	source_transcript=ENST00000803190.1;source_transcript_name=LINC00278-211;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803190.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803190.1,ENST00000803190.1;transcript_id=HG00140_ch_T0000330;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000330;transcript_name=HG00140_ch_T0000330;gene_name=LINC00278;ID=exon:HG00140_ch_T0000330:1;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2694814	2738381	.	+	.	source_transcript=ENST00000803190.1;source_transcript_name=LINC00278-211;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803190.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803190.1,ENST00000803190.1;transcript_id=HG00140_ch_T0000330;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000330;transcript_name=HG00140_ch_T0000330;gene_name=LINC00278;ID=intron:HG00140_ch_T0000330:1;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2738382	2738509	.	+	.	source_transcript=ENST00000803190.1;source_transcript_name=LINC00278-211;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803190.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803190.1,ENST00000803190.1;transcript_id=HG00140_ch_T0000330;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000330;transcript_name=HG00140_ch_T0000330;gene_name=LINC00278;ID=exon:HG00140_ch_T0000330:2;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2738510	2776730	.	+	.	source_transcript=ENST00000803190.1;source_transcript_name=LINC00278-211;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803190.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803190.1,ENST00000803190.1;transcript_id=HG00140_ch_T0000330;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000330;transcript_name=HG00140_ch_T0000330;gene_name=LINC00278;ID=intron:HG00140_ch_T0000330:2;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2776731	2776789	.	+	.	source_transcript=ENST00000803190.1;source_transcript_name=LINC00278-211;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803190.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803190.1,ENST00000803190.1;transcript_id=HG00140_ch_T0000330;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000330;transcript_name=HG00140_ch_T0000330;gene_name=LINC00278;ID=exon:HG00140_ch_T0000330:3;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2776790	2840407	.	+	.	source_transcript=ENST00000803190.1;source_transcript_name=LINC00278-211;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803190.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803190.1,ENST00000803190.1;transcript_id=HG00140_ch_T0000330;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000330;transcript_name=HG00140_ch_T0000330;gene_name=LINC00278;ID=intron:HG00140_ch_T0000330:3;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2840408	2840587	.	+	.	source_transcript=ENST00000803190.1;source_transcript_name=LINC00278-211;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803190.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803190.1,ENST00000803190.1;transcript_id=HG00140_ch_T0000330;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000330;transcript_name=HG00140_ch_T0000330;gene_name=LINC00278;ID=exon:HG00140_ch_T0000330:4;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2682629	2777307	1000	+	.	source_transcript=ENST00000803197.1;source_transcript_name=LINC00278-218;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803197.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803197.1,ENST00000803197.1;transcript_id=HG00140_ch_T0000331;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_G0000067;transcript_name=HG00140_ch_T0000331;gene_name=LINC00278;ID=HG00140_ch_T0000331;Name=LINC00278
HG00140_chrY	CAT	exon	2682629	2682945	.	+	.	source_transcript=ENST00000803197.1;source_transcript_name=LINC00278-218;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803197.1,ENST00000803197.1;transcript_id=HG00140_ch_T0000331;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000331;transcript_name=HG00140_ch_T0000331;gene_name=LINC00278;ID=exon:HG00140_ch_T0000331:0;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2682946	2738381	.	+	.	source_transcript=ENST00000803197.1;source_transcript_name=LINC00278-218;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803197.1,ENST00000803197.1;transcript_id=HG00140_ch_T0000331;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000331;transcript_name=HG00140_ch_T0000331;gene_name=LINC00278;ID=intron:HG00140_ch_T0000331:0;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2738382	2738509	.	+	.	source_transcript=ENST00000803197.1;source_transcript_name=LINC00278-218;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803197.1,ENST00000803197.1;transcript_id=HG00140_ch_T0000331;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000331;transcript_name=HG00140_ch_T0000331;gene_name=LINC00278;ID=exon:HG00140_ch_T0000331:1;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2738510	2759016	.	+	.	source_transcript=ENST00000803197.1;source_transcript_name=LINC00278-218;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803197.1,ENST00000803197.1;transcript_id=HG00140_ch_T0000331;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000331;transcript_name=HG00140_ch_T0000331;gene_name=LINC00278;ID=intron:HG00140_ch_T0000331:1;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2759017	2759074	.	+	.	source_transcript=ENST00000803197.1;source_transcript_name=LINC00278-218;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803197.1,ENST00000803197.1;transcript_id=HG00140_ch_T0000331;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000331;transcript_name=HG00140_ch_T0000331;gene_name=LINC00278;ID=exon:HG00140_ch_T0000331:2;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2759075	2776727	.	+	.	source_transcript=ENST00000803197.1;source_transcript_name=LINC00278-218;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803197.1,ENST00000803197.1;transcript_id=HG00140_ch_T0000331;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000331;transcript_name=HG00140_ch_T0000331;gene_name=LINC00278;ID=intron:HG00140_ch_T0000331:2;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2776728	2777307	.	+	.	source_transcript=ENST00000803197.1;source_transcript_name=LINC00278-218;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803197.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803197.1,ENST00000803197.1;transcript_id=HG00140_ch_T0000331;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000331;transcript_name=HG00140_ch_T0000331;gene_name=LINC00278;ID=exon:HG00140_ch_T0000331:3;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2682634	2782005	1000	+	.	source_transcript=ENST00000425031.2;source_transcript_name=LINC00278-201;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000425031.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000425031.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000425031.2,ENST00000425031.2;transcript_id=HG00140_ch_T0000332;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_G0000067;transcript_name=HG00140_ch_T0000332;gene_name=LINC00278;ID=HG00140_ch_T0000332;Name=LINC00278
HG00140_chrY	CAT	exon	2682634	2682945	.	+	.	source_transcript=ENST00000425031.2;source_transcript_name=LINC00278-201;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000425031.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000425031.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000425031.2,ENST00000425031.2;transcript_id=HG00140_ch_T0000332;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000332;transcript_name=HG00140_ch_T0000332;gene_name=LINC00278;ID=exon:HG00140_ch_T0000332:0;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2682946	2759016	.	+	.	source_transcript=ENST00000425031.2;source_transcript_name=LINC00278-201;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000425031.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000425031.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000425031.2,ENST00000425031.2;transcript_id=HG00140_ch_T0000332;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000332;transcript_name=HG00140_ch_T0000332;gene_name=LINC00278;ID=intron:HG00140_ch_T0000332:0;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2759017	2759074	.	+	.	source_transcript=ENST00000425031.2;source_transcript_name=LINC00278-201;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000425031.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000425031.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000425031.2,ENST00000425031.2;transcript_id=HG00140_ch_T0000332;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000332;transcript_name=HG00140_ch_T0000332;gene_name=LINC00278;ID=exon:HG00140_ch_T0000332:1;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2759075	2776727	.	+	.	source_transcript=ENST00000425031.2;source_transcript_name=LINC00278-201;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000425031.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000425031.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000425031.2,ENST00000425031.2;transcript_id=HG00140_ch_T0000332;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000332;transcript_name=HG00140_ch_T0000332;gene_name=LINC00278;ID=intron:HG00140_ch_T0000332:1;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2776728	2776789	.	+	.	source_transcript=ENST00000425031.2;source_transcript_name=LINC00278-201;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000425031.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000425031.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000425031.2,ENST00000425031.2;transcript_id=HG00140_ch_T0000332;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000332;transcript_name=HG00140_ch_T0000332;gene_name=LINC00278;ID=exon:HG00140_ch_T0000332:2;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2776790	2781817	.	+	.	source_transcript=ENST00000425031.2;source_transcript_name=LINC00278-201;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000425031.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000425031.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000425031.2,ENST00000425031.2;transcript_id=HG00140_ch_T0000332;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000332;transcript_name=HG00140_ch_T0000332;gene_name=LINC00278;ID=intron:HG00140_ch_T0000332:2;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2781818	2782005	.	+	.	source_transcript=ENST00000425031.2;source_transcript_name=LINC00278-201;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000425031.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000425031.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000425031.2,ENST00000425031.2;transcript_id=HG00140_ch_T0000332;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000332;transcript_name=HG00140_ch_T0000332;gene_name=LINC00278;ID=exon:HG00140_ch_T0000332:3;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2682634	2777319	1000	+	.	source_transcript=ENST00000803196.1;source_transcript_name=LINC00278-217;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803196.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803196.1,ENST00000803196.1;transcript_id=HG00140_ch_T0000333;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_G0000067;transcript_name=HG00140_ch_T0000333;gene_name=LINC00278;ID=HG00140_ch_T0000333;Name=LINC00278
HG00140_chrY	CAT	exon	2682634	2682945	.	+	.	source_transcript=ENST00000803196.1;source_transcript_name=LINC00278-217;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803196.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803196.1,ENST00000803196.1;transcript_id=HG00140_ch_T0000333;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000333;transcript_name=HG00140_ch_T0000333;gene_name=LINC00278;ID=exon:HG00140_ch_T0000333:0;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2682946	2776727	.	+	.	source_transcript=ENST00000803196.1;source_transcript_name=LINC00278-217;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803196.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803196.1,ENST00000803196.1;transcript_id=HG00140_ch_T0000333;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000333;transcript_name=HG00140_ch_T0000333;gene_name=LINC00278;ID=intron:HG00140_ch_T0000333:0;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2776728	2777319	.	+	.	source_transcript=ENST00000803196.1;source_transcript_name=LINC00278-217;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803196.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803196.1,ENST00000803196.1;transcript_id=HG00140_ch_T0000333;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000333;transcript_name=HG00140_ch_T0000333;gene_name=LINC00278;ID=exon:HG00140_ch_T0000333:1;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2682640	2800433	1000	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=HG00140_ch_T0000334;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_G0000067;transcript_name=HG00140_ch_T0000334;gene_name=LINC00278;ID=HG00140_ch_T0000334;Name=LINC00278
HG00140_chrY	CAT	exon	2682640	2682945	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=HG00140_ch_T0000334;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000334;transcript_name=HG00140_ch_T0000334;gene_name=LINC00278;ID=exon:HG00140_ch_T0000334:0;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2682946	2738381	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=HG00140_ch_T0000334;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000334;transcript_name=HG00140_ch_T0000334;gene_name=LINC00278;ID=intron:HG00140_ch_T0000334:0;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2738382	2738509	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=HG00140_ch_T0000334;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000334;transcript_name=HG00140_ch_T0000334;gene_name=LINC00278;ID=exon:HG00140_ch_T0000334:1;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2738510	2776727	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=HG00140_ch_T0000334;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000334;transcript_name=HG00140_ch_T0000334;gene_name=LINC00278;ID=intron:HG00140_ch_T0000334:1;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2776728	2776789	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=HG00140_ch_T0000334;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000334;transcript_name=HG00140_ch_T0000334;gene_name=LINC00278;ID=exon:HG00140_ch_T0000334:2;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2776790	2781817	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=HG00140_ch_T0000334;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000334;transcript_name=HG00140_ch_T0000334;gene_name=LINC00278;ID=intron:HG00140_ch_T0000334:2;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2781818	2781927	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=HG00140_ch_T0000334;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000334;transcript_name=HG00140_ch_T0000334;gene_name=LINC00278;ID=exon:HG00140_ch_T0000334:3;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2781928	2791017	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=HG00140_ch_T0000334;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000334;transcript_name=HG00140_ch_T0000334;gene_name=LINC00278;ID=intron:HG00140_ch_T0000334:3;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2791018	2791083	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=HG00140_ch_T0000334;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000334;transcript_name=HG00140_ch_T0000334;gene_name=LINC00278;ID=exon:HG00140_ch_T0000334:4;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2791084	2800166	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=HG00140_ch_T0000334;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000334;transcript_name=HG00140_ch_T0000334;gene_name=LINC00278;ID=intron:HG00140_ch_T0000334:4;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2800167	2800433	.	+	.	source_transcript=ENST00000803191.1;source_transcript_name=LINC00278-212;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803191.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803191.1,ENST00000803191.1;transcript_id=HG00140_ch_T0000334;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000334;transcript_name=HG00140_ch_T0000334;gene_name=LINC00278;ID=exon:HG00140_ch_T0000334:5;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2682640	2793592	1000	+	.	source_transcript=ENST00000803193.1;source_transcript_name=LINC00278-214;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803193.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803193.1,ENST00000803193.1;transcript_id=HG00140_ch_T0000335;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_G0000067;transcript_name=HG00140_ch_T0000335;gene_name=LINC00278;ID=HG00140_ch_T0000335;Name=LINC00278
HG00140_chrY	CAT	exon	2682640	2682945	.	+	.	source_transcript=ENST00000803193.1;source_transcript_name=LINC00278-214;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803193.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803193.1,ENST00000803193.1;transcript_id=HG00140_ch_T0000335;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000335;transcript_name=HG00140_ch_T0000335;gene_name=LINC00278;ID=exon:HG00140_ch_T0000335:0;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2682946	2738381	.	+	.	source_transcript=ENST00000803193.1;source_transcript_name=LINC00278-214;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803193.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803193.1,ENST00000803193.1;transcript_id=HG00140_ch_T0000335;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000335;transcript_name=HG00140_ch_T0000335;gene_name=LINC00278;ID=intron:HG00140_ch_T0000335:0;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2738382	2738509	.	+	.	source_transcript=ENST00000803193.1;source_transcript_name=LINC00278-214;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803193.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803193.1,ENST00000803193.1;transcript_id=HG00140_ch_T0000335;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000335;transcript_name=HG00140_ch_T0000335;gene_name=LINC00278;ID=exon:HG00140_ch_T0000335:1;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2738510	2791017	.	+	.	source_transcript=ENST00000803193.1;source_transcript_name=LINC00278-214;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803193.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803193.1,ENST00000803193.1;transcript_id=HG00140_ch_T0000335;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000335;transcript_name=HG00140_ch_T0000335;gene_name=LINC00278;ID=intron:HG00140_ch_T0000335:1;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2791018	2791083	.	+	.	source_transcript=ENST00000803193.1;source_transcript_name=LINC00278-214;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803193.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803193.1,ENST00000803193.1;transcript_id=HG00140_ch_T0000335;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000335;transcript_name=HG00140_ch_T0000335;gene_name=LINC00278;ID=exon:HG00140_ch_T0000335:2;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2791084	2793404	.	+	.	source_transcript=ENST00000803193.1;source_transcript_name=LINC00278-214;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803193.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803193.1,ENST00000803193.1;transcript_id=HG00140_ch_T0000335;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000335;transcript_name=HG00140_ch_T0000335;gene_name=LINC00278;ID=intron:HG00140_ch_T0000335:2;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2793405	2793592	.	+	.	source_transcript=ENST00000803193.1;source_transcript_name=LINC00278-214;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803193.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803193.1,ENST00000803193.1;transcript_id=HG00140_ch_T0000335;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000335;transcript_name=HG00140_ch_T0000335;gene_name=LINC00278;ID=exon:HG00140_ch_T0000335:3;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2682640	2793592	1000	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=HG00140_ch_T0000336;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_G0000067;transcript_name=HG00140_ch_T0000336;gene_name=LINC00278;ID=HG00140_ch_T0000336;Name=LINC00278
HG00140_chrY	CAT	exon	2682640	2682945	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=HG00140_ch_T0000336;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000336;transcript_name=HG00140_ch_T0000336;gene_name=LINC00278;ID=exon:HG00140_ch_T0000336:0;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2682946	2738381	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=HG00140_ch_T0000336;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000336;transcript_name=HG00140_ch_T0000336;gene_name=LINC00278;ID=intron:HG00140_ch_T0000336:0;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2738382	2738509	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=HG00140_ch_T0000336;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000336;transcript_name=HG00140_ch_T0000336;gene_name=LINC00278;ID=exon:HG00140_ch_T0000336:1;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2738510	2759016	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=HG00140_ch_T0000336;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000336;transcript_name=HG00140_ch_T0000336;gene_name=LINC00278;ID=intron:HG00140_ch_T0000336:1;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2759017	2759074	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=HG00140_ch_T0000336;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000336;transcript_name=HG00140_ch_T0000336;gene_name=LINC00278;ID=exon:HG00140_ch_T0000336:2;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2759075	2776727	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=HG00140_ch_T0000336;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000336;transcript_name=HG00140_ch_T0000336;gene_name=LINC00278;ID=intron:HG00140_ch_T0000336:2;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2776728	2776789	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=HG00140_ch_T0000336;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000336;transcript_name=HG00140_ch_T0000336;gene_name=LINC00278;ID=exon:HG00140_ch_T0000336:3;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2776790	2791017	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=HG00140_ch_T0000336;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000336;transcript_name=HG00140_ch_T0000336;gene_name=LINC00278;ID=intron:HG00140_ch_T0000336:3;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2791018	2791083	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=HG00140_ch_T0000336;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000336;transcript_name=HG00140_ch_T0000336;gene_name=LINC00278;ID=exon:HG00140_ch_T0000336:4;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2791084	2793404	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=HG00140_ch_T0000336;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000336;transcript_name=HG00140_ch_T0000336;gene_name=LINC00278;ID=intron:HG00140_ch_T0000336:4;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2793405	2793592	.	+	.	source_transcript=ENST00000803194.1;source_transcript_name=LINC00278-215;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803194.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803194.1,ENST00000803194.1;transcript_id=HG00140_ch_T0000336;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000336;transcript_name=HG00140_ch_T0000336;gene_name=LINC00278;ID=exon:HG00140_ch_T0000336:5;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2682729	2790050	1000	+	.	source_transcript=ENST00000653660.1;source_transcript_name=LINC00278-205;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653660.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000653660.1,ENST00000653660.1;transcript_id=HG00140_ch_T0000337;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_G0000067;transcript_name=HG00140_ch_T0000337;gene_name=LINC00278;ID=HG00140_ch_T0000337;Name=LINC00278
HG00140_chrY	CAT	exon	2682729	2682945	.	+	.	source_transcript=ENST00000653660.1;source_transcript_name=LINC00278-205;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000653660.1,ENST00000653660.1;transcript_id=HG00140_ch_T0000337;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000337;transcript_name=HG00140_ch_T0000337;gene_name=LINC00278;ID=exon:HG00140_ch_T0000337:0;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2682946	2738381	.	+	.	source_transcript=ENST00000653660.1;source_transcript_name=LINC00278-205;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000653660.1,ENST00000653660.1;transcript_id=HG00140_ch_T0000337;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000337;transcript_name=HG00140_ch_T0000337;gene_name=LINC00278;ID=intron:HG00140_ch_T0000337:0;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2738382	2738509	.	+	.	source_transcript=ENST00000653660.1;source_transcript_name=LINC00278-205;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000653660.1,ENST00000653660.1;transcript_id=HG00140_ch_T0000337;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000337;transcript_name=HG00140_ch_T0000337;gene_name=LINC00278;ID=exon:HG00140_ch_T0000337:1;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2738510	2776727	.	+	.	source_transcript=ENST00000653660.1;source_transcript_name=LINC00278-205;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000653660.1,ENST00000653660.1;transcript_id=HG00140_ch_T0000337;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000337;transcript_name=HG00140_ch_T0000337;gene_name=LINC00278;ID=intron:HG00140_ch_T0000337:1;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2776728	2776789	.	+	.	source_transcript=ENST00000653660.1;source_transcript_name=LINC00278-205;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000653660.1,ENST00000653660.1;transcript_id=HG00140_ch_T0000337;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000337;transcript_name=HG00140_ch_T0000337;gene_name=LINC00278;ID=exon:HG00140_ch_T0000337:2;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2776790	2781817	.	+	.	source_transcript=ENST00000653660.1;source_transcript_name=LINC00278-205;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000653660.1,ENST00000653660.1;transcript_id=HG00140_ch_T0000337;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000337;transcript_name=HG00140_ch_T0000337;gene_name=LINC00278;ID=intron:HG00140_ch_T0000337:2;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2781818	2781927	.	+	.	source_transcript=ENST00000653660.1;source_transcript_name=LINC00278-205;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000653660.1,ENST00000653660.1;transcript_id=HG00140_ch_T0000337;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000337;transcript_name=HG00140_ch_T0000337;gene_name=LINC00278;ID=exon:HG00140_ch_T0000337:3;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2781928	2789552	.	+	.	source_transcript=ENST00000653660.1;source_transcript_name=LINC00278-205;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000653660.1,ENST00000653660.1;transcript_id=HG00140_ch_T0000337;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000337;transcript_name=HG00140_ch_T0000337;gene_name=LINC00278;ID=intron:HG00140_ch_T0000337:3;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2789553	2790050	.	+	.	source_transcript=ENST00000653660.1;source_transcript_name=LINC00278-205;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653660.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000653660.1,ENST00000653660.1;transcript_id=HG00140_ch_T0000337;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000337;transcript_name=HG00140_ch_T0000337;gene_name=LINC00278;ID=exon:HG00140_ch_T0000337:4;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	2682737	2790856	1000	+	.	source_transcript=ENST00000803195.1;source_transcript_name=LINC00278-216;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803195.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803195.1,ENST00000803195.1;transcript_id=HG00140_ch_T0000338;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_G0000067;transcript_name=HG00140_ch_T0000338;gene_name=LINC00278;ID=HG00140_ch_T0000338;Name=LINC00278
HG00140_chrY	CAT	exon	2682737	2682945	.	+	.	source_transcript=ENST00000803195.1;source_transcript_name=LINC00278-216;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803195.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803195.1,ENST00000803195.1;transcript_id=HG00140_ch_T0000338;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000338;transcript_name=HG00140_ch_T0000338;gene_name=LINC00278;ID=exon:HG00140_ch_T0000338:0;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2682946	2759016	.	+	.	source_transcript=ENST00000803195.1;source_transcript_name=LINC00278-216;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803195.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803195.1,ENST00000803195.1;transcript_id=HG00140_ch_T0000338;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000338;transcript_name=HG00140_ch_T0000338;gene_name=LINC00278;ID=intron:HG00140_ch_T0000338:0;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2759017	2759074	.	+	.	source_transcript=ENST00000803195.1;source_transcript_name=LINC00278-216;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803195.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803195.1,ENST00000803195.1;transcript_id=HG00140_ch_T0000338;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000338;transcript_name=HG00140_ch_T0000338;gene_name=LINC00278;ID=exon:HG00140_ch_T0000338:1;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2759075	2776727	.	+	.	source_transcript=ENST00000803195.1;source_transcript_name=LINC00278-216;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803195.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803195.1,ENST00000803195.1;transcript_id=HG00140_ch_T0000338;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000338;transcript_name=HG00140_ch_T0000338;gene_name=LINC00278;ID=intron:HG00140_ch_T0000338:1;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2776728	2776789	.	+	.	source_transcript=ENST00000803195.1;source_transcript_name=LINC00278-216;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803195.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803195.1,ENST00000803195.1;transcript_id=HG00140_ch_T0000338;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000338;transcript_name=HG00140_ch_T0000338;gene_name=LINC00278;ID=exon:HG00140_ch_T0000338:2;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	2776790	2789552	.	+	.	source_transcript=ENST00000803195.1;source_transcript_name=LINC00278-216;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803195.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803195.1,ENST00000803195.1;transcript_id=HG00140_ch_T0000338;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000338;transcript_name=HG00140_ch_T0000338;gene_name=LINC00278;ID=intron:HG00140_ch_T0000338:2;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	2789553	2790856	.	+	.	source_transcript=ENST00000803195.1;source_transcript_name=LINC00278-216;source_gene=ENSG00000231535.9;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231535.9;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000803195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000803195.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=ENST00000803195.1,ENST00000803195.1;transcript_id=HG00140_ch_T0000338;gene_id=HG00140_ch_G0000067;Parent=HG00140_ch_T0000338;transcript_name=HG00140_ch_T0000338;gene_name=LINC00278;ID=exon:HG00140_ch_T0000338:3;Name=LINC00278;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	2973538	2974556	.	+	.	source_gene_common_name=AGPAT5P1;source_gene=ENSG00000234652.1;alternative_source_transcripts=ENST00000455855.1,ENST00000455855.1;gene_id=HG00140_ch_G0000068;gene_biotype=processed_pseudogene;gene_name=AGPAT5P1;gene_sources=liftoff;ID=HG00140_ch_G0000068;Name=AGPAT5P1
HG00140_chrY	CAT	transcript	2973538	2974556	1000	+	.	source_transcript=ENST00000455855.1;source_transcript_name=AGPAT5P1-201;source_gene=ENSG00000234652.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234652.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000455855.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455855.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AGPAT5P1;alternative_source_transcripts=ENST00000455855.1,ENST00000455855.1;transcript_id=HG00140_ch_T0000339;gene_id=HG00140_ch_G0000068;Parent=HG00140_ch_G0000068;transcript_name=HG00140_ch_T0000339;gene_name=AGPAT5P1;ID=HG00140_ch_T0000339;Name=AGPAT5P1
HG00140_chrY	CAT	exon	2973538	2974556	.	+	.	source_transcript=ENST00000455855.1;source_transcript_name=AGPAT5P1-201;source_gene=ENSG00000234652.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234652.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000455855.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455855.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AGPAT5P1;alternative_source_transcripts=ENST00000455855.1,ENST00000455855.1;transcript_id=HG00140_ch_T0000339;gene_id=HG00140_ch_G0000068;Parent=HG00140_ch_T0000339;transcript_name=HG00140_ch_T0000339;gene_name=AGPAT5P1;ID=exon:HG00140_ch_T0000339:0;Name=AGPAT5P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	3229411	3229569	.	-	.	source_gene_common_name=PRRC2CP1;source_gene=ENSG00000216777.1;alternative_source_transcripts=ENST00000404428.1,ENST00000404428.1;gene_id=HG00140_ch_G0000069;gene_biotype=processed_pseudogene;gene_name=PRRC2CP1;gene_sources=liftoff;ID=HG00140_ch_G0000069;Name=PRRC2CP1
HG00140_chrY	CAT	transcript	3229411	3229569	1000	-	.	source_transcript=ENST00000404428.1;source_transcript_name=PRRC2CP1-201;source_gene=ENSG00000216777.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000216777.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000404428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000404428.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRRC2CP1;alternative_source_transcripts=ENST00000404428.1,ENST00000404428.1;transcript_id=HG00140_ch_T0000340;gene_id=HG00140_ch_G0000069;Parent=HG00140_ch_G0000069;transcript_name=HG00140_ch_T0000340;gene_name=PRRC2CP1;ID=HG00140_ch_T0000340;Name=PRRC2CP1
HG00140_chrY	CAT	exon	3229411	3229569	.	-	.	source_transcript=ENST00000404428.1;source_transcript_name=PRRC2CP1-201;source_gene=ENSG00000216777.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000216777.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000404428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000404428.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRRC2CP1;alternative_source_transcripts=ENST00000404428.1,ENST00000404428.1;transcript_id=HG00140_ch_T0000340;gene_id=HG00140_ch_G0000069;Parent=HG00140_ch_T0000340;transcript_name=HG00140_ch_T0000340;gene_name=PRRC2CP1;ID=exon:HG00140_ch_T0000340:0;Name=PRRC2CP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	3258818	3259792	.	+	.	source_gene_common_name=TGIF2LY;source_gene=ENSG00000176679.9;alternative_source_transcripts=ENST00000321217.5,ENST00000321217.5;gene_id=HG00140_ch_G0000070;gene_biotype=protein_coding;gene_name=TGIF2LY;gene_sources=liftoff;ID=HG00140_ch_G0000070;Name=TGIF2LY
HG00140_chrY	CAT	transcript	3258818	3259792	100	+	.	source_transcript=ENST00000321217.5;source_transcript_name=TGIF2LY-201;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000321217.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000321217.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000321217.5,ENST00000321217.5;transcript_id=HG00140_ch_T0000341;gene_id=HG00140_ch_G0000070;Parent=HG00140_ch_G0000070;transcript_name=HG00140_ch_T0000341;gene_name=TGIF2LY;ID=HG00140_ch_T0000341;Name=TGIF2LY
HG00140_chrY	CAT	exon	3258818	3258878	.	+	.	source_transcript=ENST00000321217.5;source_transcript_name=TGIF2LY-201;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000321217.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000321217.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000321217.5,ENST00000321217.5;transcript_id=HG00140_ch_T0000341;gene_id=HG00140_ch_G0000070;Parent=HG00140_ch_T0000341;transcript_name=HG00140_ch_T0000341;gene_name=TGIF2LY;ID=exon:HG00140_ch_T0000341:0;Name=TGIF2LY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	3258879	3258974	.	+	.	source_transcript=ENST00000321217.5;source_transcript_name=TGIF2LY-201;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000321217.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000321217.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000321217.5,ENST00000321217.5;transcript_id=HG00140_ch_T0000341;gene_id=HG00140_ch_G0000070;Parent=HG00140_ch_T0000341;transcript_name=HG00140_ch_T0000341;gene_name=TGIF2LY;ID=intron:HG00140_ch_T0000341:0;Name=TGIF2LY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	3258975	3259792	.	+	.	source_transcript=ENST00000321217.5;source_transcript_name=TGIF2LY-201;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000321217.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000321217.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000321217.5,ENST00000321217.5;transcript_id=HG00140_ch_T0000341;gene_id=HG00140_ch_G0000070;Parent=HG00140_ch_T0000341;transcript_name=HG00140_ch_T0000341;gene_name=TGIF2LY;ID=exon:HG00140_ch_T0000341:1;Name=TGIF2LY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	3258996	3259553	.	+	0	source_transcript=ENST00000321217.5;source_transcript_name=TGIF2LY-201;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000321217.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000321217.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000321217.5,ENST00000321217.5;transcript_id=HG00140_ch_T0000341;gene_id=HG00140_ch_G0000070;Parent=HG00140_ch_T0000341;transcript_name=HG00140_ch_T0000341;gene_name=TGIF2LY;ID=CDS:HG00140_ch_T0000341:0;Name=TGIF2LY;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	3258996	3258998	.	+	0	source_transcript=ENST00000321217.5;source_transcript_name=TGIF2LY-201;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000321217.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000321217.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000321217.5,ENST00000321217.5;transcript_id=HG00140_ch_T0000341;gene_id=HG00140_ch_G0000070;Parent=HG00140_ch_T0000341;transcript_name=HG00140_ch_T0000341;gene_name=TGIF2LY;ID=start_codon:HG00140_ch_T0000341;Name=TGIF2LY;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	3259551	3259553	.	+	0	source_transcript=ENST00000321217.5;source_transcript_name=TGIF2LY-201;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000321217.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000321217.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000321217.5,ENST00000321217.5;transcript_id=HG00140_ch_T0000341;gene_id=HG00140_ch_G0000070;Parent=HG00140_ch_T0000341;transcript_name=HG00140_ch_T0000341;gene_name=TGIF2LY;ID=stop_codon:HG00140_ch_T0000341;Name=TGIF2LY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	3258866	3259792	100	+	.	source_transcript=ENST00000559055.2;source_transcript_name=TGIF2LY-202;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000559055.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000559055.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000559055.2,ENST00000559055.2;transcript_id=HG00140_ch_T0000342;gene_id=HG00140_ch_G0000070;Parent=HG00140_ch_G0000070;transcript_name=HG00140_ch_T0000342;gene_name=TGIF2LY;ID=HG00140_ch_T0000342;Name=TGIF2LY
HG00140_chrY	CAT	exon	3258866	3259792	.	+	.	source_transcript=ENST00000559055.2;source_transcript_name=TGIF2LY-202;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000559055.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000559055.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000559055.2,ENST00000559055.2;transcript_id=HG00140_ch_T0000342;gene_id=HG00140_ch_G0000070;Parent=HG00140_ch_T0000342;transcript_name=HG00140_ch_T0000342;gene_name=TGIF2LY;ID=exon:HG00140_ch_T0000342:0;Name=TGIF2LY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	3258996	3259553	.	+	0	source_transcript=ENST00000559055.2;source_transcript_name=TGIF2LY-202;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000559055.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000559055.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000559055.2,ENST00000559055.2;transcript_id=HG00140_ch_T0000342;gene_id=HG00140_ch_G0000070;Parent=HG00140_ch_T0000342;transcript_name=HG00140_ch_T0000342;gene_name=TGIF2LY;ID=CDS:HG00140_ch_T0000342:0;Name=TGIF2LY;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	3258996	3258998	.	+	0	source_transcript=ENST00000559055.2;source_transcript_name=TGIF2LY-202;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000559055.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000559055.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000559055.2,ENST00000559055.2;transcript_id=HG00140_ch_T0000342;gene_id=HG00140_ch_G0000070;Parent=HG00140_ch_T0000342;transcript_name=HG00140_ch_T0000342;gene_name=TGIF2LY;ID=start_codon:HG00140_ch_T0000342;Name=TGIF2LY;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	3259551	3259553	.	+	0	source_transcript=ENST00000559055.2;source_transcript_name=TGIF2LY-202;source_gene=ENSG00000176679.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000176679.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000559055.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000559055.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=ENST00000559055.2,ENST00000559055.2;transcript_id=HG00140_ch_T0000342;gene_id=HG00140_ch_G0000070;Parent=HG00140_ch_T0000342;transcript_name=HG00140_ch_T0000342;gene_name=TGIF2LY;ID=stop_codon:HG00140_ch_T0000342;Name=TGIF2LY;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	3362564	3363627	.	+	.	source_gene_common_name=USP12PY;source_gene=ENSG00000232927.1;alternative_source_transcripts=ENST00000427677.1,ENST00000427677.1;gene_id=HG00140_ch_G0000071;gene_biotype=processed_pseudogene;gene_name=USP12PY;gene_sources=liftoff;ID=HG00140_ch_G0000071;Name=USP12PY
HG00140_chrY	CAT	transcript	3362564	3363627	1000	+	.	source_transcript=ENST00000427677.1;source_transcript_name=USP12PY-201;source_gene=ENSG00000232927.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232927.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000427677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427677.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP12PY;alternative_source_transcripts=ENST00000427677.1,ENST00000427677.1;transcript_id=HG00140_ch_T0000343;gene_id=HG00140_ch_G0000071;Parent=HG00140_ch_G0000071;transcript_name=HG00140_ch_T0000343;gene_name=USP12PY;ID=HG00140_ch_T0000343;Name=USP12PY
HG00140_chrY	CAT	exon	3362564	3363627	.	+	.	source_transcript=ENST00000427677.1;source_transcript_name=USP12PY-201;source_gene=ENSG00000232927.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232927.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000427677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427677.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP12PY;alternative_source_transcripts=ENST00000427677.1,ENST00000427677.1;transcript_id=HG00140_ch_T0000343;gene_id=HG00140_ch_G0000071;Parent=HG00140_ch_T0000343;transcript_name=HG00140_ch_T0000343;gene_name=USP12PY;ID=exon:HG00140_ch_T0000343:0;Name=USP12PY;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	3455965	3544700	.	+	.	source_gene_common_name=ENSG00000286050;source_gene=ENSG00000286050.2;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;gene_id=HG00140_ch_G0000072;gene_biotype=lncRNA;gene_name=ENSG00000286050;gene_sources=liftoff;ID=HG00140_ch_G0000072;Name=ENSG00000286050
HG00140_chrY	CAT	transcript	3455965	3514315	1000	+	.	source_transcript=ENST00000805713.1;source_transcript_name=ENST00000805713;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805713.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;transcript_id=HG00140_ch_T0000344;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_G0000072;transcript_name=HG00140_ch_T0000344;gene_name=ENSG00000286050;ID=HG00140_ch_T0000344;Name=ENSG00000286050
HG00140_chrY	CAT	exon	3455965	3456109	.	+	.	source_transcript=ENST00000805713.1;source_transcript_name=ENST00000805713;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;transcript_id=HG00140_ch_T0000344;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_T0000344;transcript_name=HG00140_ch_T0000344;gene_name=ENSG00000286050;ID=exon:HG00140_ch_T0000344:0;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	3456110	3483626	.	+	.	source_transcript=ENST00000805713.1;source_transcript_name=ENST00000805713;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;transcript_id=HG00140_ch_T0000344;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_T0000344;transcript_name=HG00140_ch_T0000344;gene_name=ENSG00000286050;ID=intron:HG00140_ch_T0000344:0;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	3483627	3483750	.	+	.	source_transcript=ENST00000805713.1;source_transcript_name=ENST00000805713;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;transcript_id=HG00140_ch_T0000344;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_T0000344;transcript_name=HG00140_ch_T0000344;gene_name=ENSG00000286050;ID=exon:HG00140_ch_T0000344:1;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	3483751	3484182	.	+	.	source_transcript=ENST00000805713.1;source_transcript_name=ENST00000805713;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;transcript_id=HG00140_ch_T0000344;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_T0000344;transcript_name=HG00140_ch_T0000344;gene_name=ENSG00000286050;ID=intron:HG00140_ch_T0000344:1;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	3484183	3484294	.	+	.	source_transcript=ENST00000805713.1;source_transcript_name=ENST00000805713;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;transcript_id=HG00140_ch_T0000344;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_T0000344;transcript_name=HG00140_ch_T0000344;gene_name=ENSG00000286050;ID=exon:HG00140_ch_T0000344:2;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	3484295	3512209	.	+	.	source_transcript=ENST00000805713.1;source_transcript_name=ENST00000805713;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;transcript_id=HG00140_ch_T0000344;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_T0000344;transcript_name=HG00140_ch_T0000344;gene_name=ENSG00000286050;ID=intron:HG00140_ch_T0000344:2;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	3512210	3512264	.	+	.	source_transcript=ENST00000805713.1;source_transcript_name=ENST00000805713;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;transcript_id=HG00140_ch_T0000344;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_T0000344;transcript_name=HG00140_ch_T0000344;gene_name=ENSG00000286050;ID=exon:HG00140_ch_T0000344:3;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	3512265	3514160	.	+	.	source_transcript=ENST00000805713.1;source_transcript_name=ENST00000805713;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;transcript_id=HG00140_ch_T0000344;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_T0000344;transcript_name=HG00140_ch_T0000344;gene_name=ENSG00000286050;ID=intron:HG00140_ch_T0000344:3;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	3514161	3514315	.	+	.	source_transcript=ENST00000805713.1;source_transcript_name=ENST00000805713;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805713.1,ENST00000805713.1;transcript_id=HG00140_ch_T0000344;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_T0000344;transcript_name=HG00140_ch_T0000344;gene_name=ENSG00000286050;ID=exon:HG00140_ch_T0000344:4;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	3466046	3544700	1000	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=HG00140_ch_T0000346;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_G0000072;transcript_name=HG00140_ch_T0000346;gene_name=ENSG00000286050;ID=HG00140_ch_T0000346;Name=ENSG00000286050
HG00140_chrY	CAT	exon	3466046	3466154	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=HG00140_ch_T0000346;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_T0000346;transcript_name=HG00140_ch_T0000346;gene_name=ENSG00000286050;ID=exon:HG00140_ch_T0000346:0;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	3466155	3483626	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=HG00140_ch_T0000346;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_T0000346;transcript_name=HG00140_ch_T0000346;gene_name=ENSG00000286050;ID=intron:HG00140_ch_T0000346:0;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	3483627	3483750	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=HG00140_ch_T0000346;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_T0000346;transcript_name=HG00140_ch_T0000346;gene_name=ENSG00000286050;ID=exon:HG00140_ch_T0000346:1;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	3483751	3484182	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=HG00140_ch_T0000346;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_T0000346;transcript_name=HG00140_ch_T0000346;gene_name=ENSG00000286050;ID=intron:HG00140_ch_T0000346:1;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	3484183	3484294	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=HG00140_ch_T0000346;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_T0000346;transcript_name=HG00140_ch_T0000346;gene_name=ENSG00000286050;ID=exon:HG00140_ch_T0000346:2;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	3484295	3543380	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=HG00140_ch_T0000346;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_T0000346;transcript_name=HG00140_ch_T0000346;gene_name=ENSG00000286050;ID=intron:HG00140_ch_T0000346:2;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	3543381	3543501	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=HG00140_ch_T0000346;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_T0000346;transcript_name=HG00140_ch_T0000346;gene_name=ENSG00000286050;ID=exon:HG00140_ch_T0000346:3;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	3543502	3543639	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=HG00140_ch_T0000346;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_T0000346;transcript_name=HG00140_ch_T0000346;gene_name=ENSG00000286050;ID=intron:HG00140_ch_T0000346:3;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	3543640	3543733	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=HG00140_ch_T0000346;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_T0000346;transcript_name=HG00140_ch_T0000346;gene_name=ENSG00000286050;ID=exon:HG00140_ch_T0000346:4;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	3543734	3544199	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=HG00140_ch_T0000346;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_T0000346;transcript_name=HG00140_ch_T0000346;gene_name=ENSG00000286050;ID=intron:HG00140_ch_T0000346:4;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	3544200	3544700	.	+	.	source_transcript=ENST00000650970.2;source_transcript_name=ENST00000650970;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650970.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000650970.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000650970.2,ENST00000650970.2;transcript_id=HG00140_ch_T0000346;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_T0000346;transcript_name=HG00140_ch_T0000346;gene_name=ENSG00000286050;ID=exon:HG00140_ch_T0000346:5;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	3466047	3516570	1000	+	.	source_transcript=ENST00000805714.1;source_transcript_name=ENST00000805714;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805714.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805714.1,ENST00000805714.1;transcript_id=HG00140_ch_T0000347;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_G0000072;transcript_name=HG00140_ch_T0000347;gene_name=ENSG00000286050;ID=HG00140_ch_T0000347;Name=ENSG00000286050
HG00140_chrY	CAT	exon	3466047	3466154	.	+	.	source_transcript=ENST00000805714.1;source_transcript_name=ENST00000805714;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805714.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805714.1,ENST00000805714.1;transcript_id=HG00140_ch_T0000347;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_T0000347;transcript_name=HG00140_ch_T0000347;gene_name=ENSG00000286050;ID=exon:HG00140_ch_T0000347:0;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	3466155	3483626	.	+	.	source_transcript=ENST00000805714.1;source_transcript_name=ENST00000805714;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805714.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805714.1,ENST00000805714.1;transcript_id=HG00140_ch_T0000347;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_T0000347;transcript_name=HG00140_ch_T0000347;gene_name=ENSG00000286050;ID=intron:HG00140_ch_T0000347:0;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	3483627	3483750	.	+	.	source_transcript=ENST00000805714.1;source_transcript_name=ENST00000805714;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805714.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805714.1,ENST00000805714.1;transcript_id=HG00140_ch_T0000347;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_T0000347;transcript_name=HG00140_ch_T0000347;gene_name=ENSG00000286050;ID=exon:HG00140_ch_T0000347:1;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	3483751	3484182	.	+	.	source_transcript=ENST00000805714.1;source_transcript_name=ENST00000805714;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805714.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805714.1,ENST00000805714.1;transcript_id=HG00140_ch_T0000347;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_T0000347;transcript_name=HG00140_ch_T0000347;gene_name=ENSG00000286050;ID=intron:HG00140_ch_T0000347:1;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	3484183	3484294	.	+	.	source_transcript=ENST00000805714.1;source_transcript_name=ENST00000805714;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805714.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805714.1,ENST00000805714.1;transcript_id=HG00140_ch_T0000347;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_T0000347;transcript_name=HG00140_ch_T0000347;gene_name=ENSG00000286050;ID=exon:HG00140_ch_T0000347:2;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	3484295	3515266	.	+	.	source_transcript=ENST00000805714.1;source_transcript_name=ENST00000805714;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805714.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805714.1,ENST00000805714.1;transcript_id=HG00140_ch_T0000347;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_T0000347;transcript_name=HG00140_ch_T0000347;gene_name=ENSG00000286050;ID=intron:HG00140_ch_T0000347:2;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	3515267	3515336	.	+	.	source_transcript=ENST00000805714.1;source_transcript_name=ENST00000805714;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805714.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805714.1,ENST00000805714.1;transcript_id=HG00140_ch_T0000347;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_T0000347;transcript_name=HG00140_ch_T0000347;gene_name=ENSG00000286050;ID=exon:HG00140_ch_T0000347:3;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	3515337	3515796	.	+	.	source_transcript=ENST00000805714.1;source_transcript_name=ENST00000805714;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805714.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805714.1,ENST00000805714.1;transcript_id=HG00140_ch_T0000347;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_T0000347;transcript_name=HG00140_ch_T0000347;gene_name=ENSG00000286050;ID=intron:HG00140_ch_T0000347:3;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	3515797	3516570	.	+	.	source_transcript=ENST00000805714.1;source_transcript_name=ENST00000805714;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805714.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805714.1,ENST00000805714.1;transcript_id=HG00140_ch_T0000347;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_T0000347;transcript_name=HG00140_ch_T0000347;gene_name=ENSG00000286050;ID=exon:HG00140_ch_T0000347:4;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	3466109	3516568	1000	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=HG00140_ch_T0000348;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_G0000072;transcript_name=HG00140_ch_T0000348;gene_name=ENSG00000286050;ID=HG00140_ch_T0000348;Name=ENSG00000286050
HG00140_chrY	CAT	exon	3466109	3466154	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=HG00140_ch_T0000348;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_T0000348;transcript_name=HG00140_ch_T0000348;gene_name=ENSG00000286050;ID=exon:HG00140_ch_T0000348:0;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	3466155	3480448	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=HG00140_ch_T0000348;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_T0000348;transcript_name=HG00140_ch_T0000348;gene_name=ENSG00000286050;ID=intron:HG00140_ch_T0000348:0;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	3480449	3480544	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=HG00140_ch_T0000348;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_T0000348;transcript_name=HG00140_ch_T0000348;gene_name=ENSG00000286050;ID=exon:HG00140_ch_T0000348:1;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	3480545	3483626	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=HG00140_ch_T0000348;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_T0000348;transcript_name=HG00140_ch_T0000348;gene_name=ENSG00000286050;ID=intron:HG00140_ch_T0000348:1;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	3483627	3483750	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=HG00140_ch_T0000348;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_T0000348;transcript_name=HG00140_ch_T0000348;gene_name=ENSG00000286050;ID=exon:HG00140_ch_T0000348:2;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	3483751	3484182	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=HG00140_ch_T0000348;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_T0000348;transcript_name=HG00140_ch_T0000348;gene_name=ENSG00000286050;ID=intron:HG00140_ch_T0000348:2;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	3484183	3484294	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=HG00140_ch_T0000348;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_T0000348;transcript_name=HG00140_ch_T0000348;gene_name=ENSG00000286050;ID=exon:HG00140_ch_T0000348:3;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	3484295	3515266	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=HG00140_ch_T0000348;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_T0000348;transcript_name=HG00140_ch_T0000348;gene_name=ENSG00000286050;ID=intron:HG00140_ch_T0000348:3;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	3515267	3515336	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=HG00140_ch_T0000348;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_T0000348;transcript_name=HG00140_ch_T0000348;gene_name=ENSG00000286050;ID=exon:HG00140_ch_T0000348:4;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	3515337	3515796	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=HG00140_ch_T0000348;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_T0000348;transcript_name=HG00140_ch_T0000348;gene_name=ENSG00000286050;ID=intron:HG00140_ch_T0000348:4;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	3515797	3516568	.	+	.	source_transcript=ENST00000805715.1;source_transcript_name=ENST00000805715;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805715.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805715.1,ENST00000805715.1;transcript_id=HG00140_ch_T0000348;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_T0000348;transcript_name=HG00140_ch_T0000348;gene_name=ENSG00000286050;ID=exon:HG00140_ch_T0000348:5;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	3480487	3514315	1000	+	.	source_transcript=ENST00000805716.1;source_transcript_name=ENST00000805716;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805716.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805716.1,ENST00000805716.1;transcript_id=HG00140_ch_T0000349;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_G0000072;transcript_name=HG00140_ch_T0000349;gene_name=ENSG00000286050;ID=HG00140_ch_T0000349;Name=ENSG00000286050
HG00140_chrY	CAT	exon	3480487	3480544	.	+	.	source_transcript=ENST00000805716.1;source_transcript_name=ENST00000805716;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805716.1,ENST00000805716.1;transcript_id=HG00140_ch_T0000349;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_T0000349;transcript_name=HG00140_ch_T0000349;gene_name=ENSG00000286050;ID=exon:HG00140_ch_T0000349:0;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	3480545	3483626	.	+	.	source_transcript=ENST00000805716.1;source_transcript_name=ENST00000805716;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805716.1,ENST00000805716.1;transcript_id=HG00140_ch_T0000349;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_T0000349;transcript_name=HG00140_ch_T0000349;gene_name=ENSG00000286050;ID=intron:HG00140_ch_T0000349:0;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	3483627	3483750	.	+	.	source_transcript=ENST00000805716.1;source_transcript_name=ENST00000805716;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805716.1,ENST00000805716.1;transcript_id=HG00140_ch_T0000349;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_T0000349;transcript_name=HG00140_ch_T0000349;gene_name=ENSG00000286050;ID=exon:HG00140_ch_T0000349:1;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	3483751	3484182	.	+	.	source_transcript=ENST00000805716.1;source_transcript_name=ENST00000805716;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805716.1,ENST00000805716.1;transcript_id=HG00140_ch_T0000349;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_T0000349;transcript_name=HG00140_ch_T0000349;gene_name=ENSG00000286050;ID=intron:HG00140_ch_T0000349:1;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	3484183	3484294	.	+	.	source_transcript=ENST00000805716.1;source_transcript_name=ENST00000805716;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805716.1,ENST00000805716.1;transcript_id=HG00140_ch_T0000349;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_T0000349;transcript_name=HG00140_ch_T0000349;gene_name=ENSG00000286050;ID=exon:HG00140_ch_T0000349:2;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	3484295	3512209	.	+	.	source_transcript=ENST00000805716.1;source_transcript_name=ENST00000805716;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805716.1,ENST00000805716.1;transcript_id=HG00140_ch_T0000349;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_T0000349;transcript_name=HG00140_ch_T0000349;gene_name=ENSG00000286050;ID=intron:HG00140_ch_T0000349:2;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	3512210	3512264	.	+	.	source_transcript=ENST00000805716.1;source_transcript_name=ENST00000805716;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805716.1,ENST00000805716.1;transcript_id=HG00140_ch_T0000349;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_T0000349;transcript_name=HG00140_ch_T0000349;gene_name=ENSG00000286050;ID=exon:HG00140_ch_T0000349:3;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	3512265	3514160	.	+	.	source_transcript=ENST00000805716.1;source_transcript_name=ENST00000805716;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805716.1,ENST00000805716.1;transcript_id=HG00140_ch_T0000349;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_T0000349;transcript_name=HG00140_ch_T0000349;gene_name=ENSG00000286050;ID=intron:HG00140_ch_T0000349:3;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	3514161	3514315	.	+	.	source_transcript=ENST00000805716.1;source_transcript_name=ENST00000805716;source_gene=ENSG00000286050.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286050.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805716.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286050;alternative_source_transcripts=ENST00000805716.1,ENST00000805716.1;transcript_id=HG00140_ch_T0000349;gene_id=HG00140_ch_G0000072;Parent=HG00140_ch_T0000349;transcript_name=HG00140_ch_T0000349;gene_name=ENSG00000286050;ID=exon:HG00140_ch_T0000349:4;Name=ENSG00000286050;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	3457761	3459310	.	-	.	source_gene_common_name=RNF19BPY;source_gene=ENSG00000225653.1;alternative_source_transcripts=ENST00000458209.1,ENST00000458209.1;gene_id=HG00140_ch_G0000073;gene_biotype=processed_pseudogene;gene_name=RNF19BPY;gene_sources=liftoff;ID=HG00140_ch_G0000073;Name=RNF19BPY
HG00140_chrY	CAT	transcript	3457761	3459310	1000	-	.	source_transcript=ENST00000458209.1;source_transcript_name=RNF19BPY-201;source_gene=ENSG00000225653.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225653.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000458209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458209.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNF19BPY;alternative_source_transcripts=ENST00000458209.1,ENST00000458209.1;transcript_id=HG00140_ch_T0000345;gene_id=HG00140_ch_G0000073;Parent=HG00140_ch_G0000073;transcript_name=HG00140_ch_T0000345;gene_name=RNF19BPY;ID=HG00140_ch_T0000345;Name=RNF19BPY
HG00140_chrY	CAT	exon	3457761	3459310	.	-	.	source_transcript=ENST00000458209.1;source_transcript_name=RNF19BPY-201;source_gene=ENSG00000225653.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225653.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000458209.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458209.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNF19BPY;alternative_source_transcripts=ENST00000458209.1,ENST00000458209.1;transcript_id=HG00140_ch_T0000345;gene_id=HG00140_ch_G0000073;Parent=HG00140_ch_T0000345;transcript_name=HG00140_ch_T0000345;gene_name=RNF19BPY;ID=exon:HG00140_ch_T0000345:0;Name=RNF19BPY;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	3531027	3532672	.	-	.	source_gene_common_name=ENSG00000218410;source_gene=ENSG00000218410.1;alternative_source_transcripts=ENST00000405035.1,ENST00000405035.1;gene_id=HG00140_ch_G0000074;gene_biotype=processed_pseudogene;gene_name=ENSG00000218410;gene_sources=liftoff;ID=HG00140_ch_G0000074;Name=ENSG00000218410
HG00140_chrY	CAT	transcript	3531027	3532672	1000	-	.	source_transcript=ENST00000405035.1;source_transcript_name=ENST00000405035;source_gene=ENSG00000218410.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000218410.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000405035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000405035.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000218410;alternative_source_transcripts=ENST00000405035.1,ENST00000405035.1;transcript_id=HG00140_ch_T0000350;gene_id=HG00140_ch_G0000074;Parent=HG00140_ch_G0000074;transcript_name=HG00140_ch_T0000350;gene_name=ENSG00000218410;ID=HG00140_ch_T0000350;Name=ENSG00000218410
HG00140_chrY	CAT	exon	3531027	3532672	.	-	.	source_transcript=ENST00000405035.1;source_transcript_name=ENST00000405035;source_gene=ENSG00000218410.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000218410.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000405035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000405035.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000218410;alternative_source_transcripts=ENST00000405035.1,ENST00000405035.1;transcript_id=HG00140_ch_T0000350;gene_id=HG00140_ch_G0000074;Parent=HG00140_ch_T0000350;transcript_name=HG00140_ch_T0000350;gene_name=ENSG00000218410;ID=exon:HG00140_ch_T0000350:0;Name=ENSG00000218410;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	3546109	3546525	.	-	.	source_gene_common_name=UBE2V1P3;source_gene=ENSG00000229518.1;alternative_source_transcripts=ENST00000439651.1,ENST00000439651.1;gene_id=HG00140_ch_G0000075;gene_biotype=processed_pseudogene;gene_name=UBE2V1P3;gene_sources=liftoff;ID=HG00140_ch_G0000075;Name=UBE2V1P3
HG00140_chrY	CAT	transcript	3546109	3546525	1000	-	.	source_transcript=ENST00000439651.1;source_transcript_name=UBE2V1P3-201;source_gene=ENSG00000229518.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229518.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000439651.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439651.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UBE2V1P3;alternative_source_transcripts=ENST00000439651.1,ENST00000439651.1;transcript_id=HG00140_ch_T0000351;gene_id=HG00140_ch_G0000075;Parent=HG00140_ch_G0000075;transcript_name=HG00140_ch_T0000351;gene_name=UBE2V1P3;ID=HG00140_ch_T0000351;Name=UBE2V1P3
HG00140_chrY	CAT	exon	3546109	3546525	.	-	.	source_transcript=ENST00000439651.1;source_transcript_name=UBE2V1P3-201;source_gene=ENSG00000229518.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229518.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000439651.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439651.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UBE2V1P3;alternative_source_transcripts=ENST00000439651.1,ENST00000439651.1;transcript_id=HG00140_ch_T0000351;gene_id=HG00140_ch_G0000075;Parent=HG00140_ch_T0000351;transcript_name=HG00140_ch_T0000351;gene_name=UBE2V1P3;ID=exon:HG00140_ch_T0000351:0;Name=UBE2V1P3;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	3718408	3782688	.	+	.	source_gene_common_name=ENSG00000229308;source_gene=ENSG00000229308.2;alternative_source_transcripts=ENST00000753206.1,ENST00000753206.1;gene_id=HG00140_ch_G0000076;gene_biotype=lncRNA;gene_name=ENSG00000229308;gene_sources=liftoff;ID=HG00140_ch_G0000076;Name=ENSG00000229308
HG00140_chrY	CAT	transcript	3718408	3782688	1000	+	.	source_transcript=ENST00000753206.1;source_transcript_name=ENST00000753206;source_gene=ENSG00000229308.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229308.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000753206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000753206.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229308;alternative_source_transcripts=ENST00000753206.1,ENST00000753206.1;transcript_id=HG00140_ch_T0000352;gene_id=HG00140_ch_G0000076;Parent=HG00140_ch_G0000076;transcript_name=HG00140_ch_T0000352;gene_name=ENSG00000229308;ID=HG00140_ch_T0000352;Name=ENSG00000229308
HG00140_chrY	CAT	exon	3718408	3718472	.	+	.	source_transcript=ENST00000753206.1;source_transcript_name=ENST00000753206;source_gene=ENSG00000229308.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229308.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000753206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000753206.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229308;alternative_source_transcripts=ENST00000753206.1,ENST00000753206.1;transcript_id=HG00140_ch_T0000352;gene_id=HG00140_ch_G0000076;Parent=HG00140_ch_T0000352;transcript_name=HG00140_ch_T0000352;gene_name=ENSG00000229308;ID=exon:HG00140_ch_T0000352:0;Name=ENSG00000229308;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	3718473	3782054	.	+	.	source_transcript=ENST00000753206.1;source_transcript_name=ENST00000753206;source_gene=ENSG00000229308.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229308.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000753206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000753206.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229308;alternative_source_transcripts=ENST00000753206.1,ENST00000753206.1;transcript_id=HG00140_ch_T0000352;gene_id=HG00140_ch_G0000076;Parent=HG00140_ch_T0000352;transcript_name=HG00140_ch_T0000352;gene_name=ENSG00000229308;ID=intron:HG00140_ch_T0000352:0;Name=ENSG00000229308;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	3782055	3782688	.	+	.	source_transcript=ENST00000753206.1;source_transcript_name=ENST00000753206;source_gene=ENSG00000229308.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229308.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000753206.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000753206.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229308;alternative_source_transcripts=ENST00000753206.1,ENST00000753206.1;transcript_id=HG00140_ch_T0000352;gene_id=HG00140_ch_G0000076;Parent=HG00140_ch_T0000352;transcript_name=HG00140_ch_T0000352;gene_name=ENSG00000229308;ID=exon:HG00140_ch_T0000352:1;Name=ENSG00000229308;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	3718525	3782688	1000	+	.	source_transcript=ENST00000426699.2;source_transcript_name=ENST00000426699;source_gene=ENSG00000229308.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229308.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426699.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426699.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229308;alternative_source_transcripts=ENST00000426699.2,ENST00000426699.2;transcript_id=HG00140_ch_T0000353;gene_id=HG00140_ch_G0000076;Parent=HG00140_ch_G0000076;transcript_name=HG00140_ch_T0000353;gene_name=ENSG00000229308;ID=HG00140_ch_T0000353;Name=ENSG00000229308
HG00140_chrY	CAT	exon	3718525	3718793	.	+	.	source_transcript=ENST00000426699.2;source_transcript_name=ENST00000426699;source_gene=ENSG00000229308.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229308.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426699.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426699.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229308;alternative_source_transcripts=ENST00000426699.2,ENST00000426699.2;transcript_id=HG00140_ch_T0000353;gene_id=HG00140_ch_G0000076;Parent=HG00140_ch_T0000353;transcript_name=HG00140_ch_T0000353;gene_name=ENSG00000229308;ID=exon:HG00140_ch_T0000353:0;Name=ENSG00000229308;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	3718794	3782054	.	+	.	source_transcript=ENST00000426699.2;source_transcript_name=ENST00000426699;source_gene=ENSG00000229308.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229308.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426699.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426699.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229308;alternative_source_transcripts=ENST00000426699.2,ENST00000426699.2;transcript_id=HG00140_ch_T0000353;gene_id=HG00140_ch_G0000076;Parent=HG00140_ch_T0000353;transcript_name=HG00140_ch_T0000353;gene_name=ENSG00000229308;ID=intron:HG00140_ch_T0000353:0;Name=ENSG00000229308;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	3782055	3782688	.	+	.	source_transcript=ENST00000426699.2;source_transcript_name=ENST00000426699;source_gene=ENSG00000229308.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229308.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426699.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426699.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229308;alternative_source_transcripts=ENST00000426699.2,ENST00000426699.2;transcript_id=HG00140_ch_T0000353;gene_id=HG00140_ch_G0000076;Parent=HG00140_ch_T0000353;transcript_name=HG00140_ch_T0000353;gene_name=ENSG00000229308;ID=exon:HG00140_ch_T0000353:1;Name=ENSG00000229308;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	3857052	3857157	.	-	.	source_gene_common_name=RNU6-303P;source_gene=ENSG00000252900.1;alternative_source_transcripts=ENST00000517091.1,ENST00000517091.1;gene_id=HG00140_ch_G0000077;gene_biotype=snRNA;gene_name=RNU6-303P;gene_sources=liftoff;ID=HG00140_ch_G0000077;Name=RNU6-303P
HG00140_chrY	CAT	transcript	3857052	3857157	1000	-	.	source_transcript=ENST00000517091.1;source_transcript_name=RNU6-303P-201;source_gene=ENSG00000252900.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252900.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000517091.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000517091.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-303P;alternative_source_transcripts=ENST00000517091.1,ENST00000517091.1;transcript_id=HG00140_ch_T0000354;gene_id=HG00140_ch_G0000077;Parent=HG00140_ch_G0000077;transcript_name=HG00140_ch_T0000354;gene_name=RNU6-303P;ID=HG00140_ch_T0000354;Name=RNU6-303P
HG00140_chrY	CAT	exon	3857052	3857157	.	-	.	source_transcript=ENST00000517091.1;source_transcript_name=RNU6-303P-201;source_gene=ENSG00000252900.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252900.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000517091.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000517091.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-303P;alternative_source_transcripts=ENST00000517091.1,ENST00000517091.1;transcript_id=HG00140_ch_T0000354;gene_id=HG00140_ch_G0000077;Parent=HG00140_ch_T0000354;transcript_name=HG00140_ch_T0000354;gene_name=RNU6-303P;ID=exon:HG00140_ch_T0000354:0;Name=RNU6-303P;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	4483924	4485087	.	-	.	source_gene_common_name=SERBP1P2;source_gene=ENSG00000225878.1;alternative_source_transcripts=ENST00000436888.1,ENST00000436888.1;gene_id=HG00140_ch_G0000078;gene_biotype=processed_pseudogene;gene_name=SERBP1P2;gene_sources=liftoff;ID=HG00140_ch_G0000078;Name=SERBP1P2
HG00140_chrY	CAT	transcript	4483924	4485087	1000	-	.	source_transcript=ENST00000436888.1;source_transcript_name=SERBP1P2-201;source_gene=ENSG00000225878.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225878.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436888.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SERBP1P2;alternative_source_transcripts=ENST00000436888.1,ENST00000436888.1;transcript_id=HG00140_ch_T0000355;gene_id=HG00140_ch_G0000078;Parent=HG00140_ch_G0000078;transcript_name=HG00140_ch_T0000355;gene_name=SERBP1P2;ID=HG00140_ch_T0000355;Name=SERBP1P2
HG00140_chrY	CAT	exon	4483924	4485087	.	-	.	source_transcript=ENST00000436888.1;source_transcript_name=SERBP1P2-201;source_gene=ENSG00000225878.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225878.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436888.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SERBP1P2;alternative_source_transcripts=ENST00000436888.1,ENST00000436888.1;transcript_id=HG00140_ch_T0000355;gene_id=HG00140_ch_G0000078;Parent=HG00140_ch_T0000355;transcript_name=HG00140_ch_T0000355;gene_name=SERBP1P2;ID=exon:HG00140_ch_T0000355:0;Name=SERBP1P2;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	4675593	4682441	.	-	.	source_gene_common_name=ENSG00000277930;source_gene=ENSG00000277930.2;alternative_source_transcripts=ENST00000618284.2,ENST00000618284.2;gene_id=HG00140_ch_G0000079;gene_biotype=lncRNA;gene_name=ENSG00000277930;gene_sources=liftoff;ID=HG00140_ch_G0000079;Name=ENSG00000277930
HG00140_chrY	CAT	transcript	4675593	4681873	1000	-	.	source_transcript=ENST00000618284.2;source_transcript_name=ENST00000618284;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000618284.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618284.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000618284.2,ENST00000618284.2;transcript_id=HG00140_ch_T0000356;gene_id=HG00140_ch_G0000079;Parent=HG00140_ch_G0000079;transcript_name=HG00140_ch_T0000356;gene_name=ENSG00000277930;ID=HG00140_ch_T0000356;Name=ENSG00000277930
HG00140_chrY	CAT	exon	4675593	4676447	.	-	.	source_transcript=ENST00000618284.2;source_transcript_name=ENST00000618284;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000618284.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618284.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000618284.2,ENST00000618284.2;transcript_id=HG00140_ch_T0000356;gene_id=HG00140_ch_G0000079;Parent=HG00140_ch_T0000356;transcript_name=HG00140_ch_T0000356;gene_name=ENSG00000277930;ID=exon:HG00140_ch_T0000356:0;Name=ENSG00000277930;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	4676448	4679727	.	-	.	source_transcript=ENST00000618284.2;source_transcript_name=ENST00000618284;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000618284.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618284.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000618284.2,ENST00000618284.2;transcript_id=HG00140_ch_T0000356;gene_id=HG00140_ch_G0000079;Parent=HG00140_ch_T0000356;transcript_name=HG00140_ch_T0000356;gene_name=ENSG00000277930;ID=intron:HG00140_ch_T0000356:0;Name=ENSG00000277930;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	4679728	4679901	.	-	.	source_transcript=ENST00000618284.2;source_transcript_name=ENST00000618284;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000618284.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618284.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000618284.2,ENST00000618284.2;transcript_id=HG00140_ch_T0000356;gene_id=HG00140_ch_G0000079;Parent=HG00140_ch_T0000356;transcript_name=HG00140_ch_T0000356;gene_name=ENSG00000277930;ID=exon:HG00140_ch_T0000356:1;Name=ENSG00000277930;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	4679902	4681609	.	-	.	source_transcript=ENST00000618284.2;source_transcript_name=ENST00000618284;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000618284.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618284.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000618284.2,ENST00000618284.2;transcript_id=HG00140_ch_T0000356;gene_id=HG00140_ch_G0000079;Parent=HG00140_ch_T0000356;transcript_name=HG00140_ch_T0000356;gene_name=ENSG00000277930;ID=intron:HG00140_ch_T0000356:1;Name=ENSG00000277930;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	4681610	4681873	.	-	.	source_transcript=ENST00000618284.2;source_transcript_name=ENST00000618284;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000618284.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618284.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000618284.2,ENST00000618284.2;transcript_id=HG00140_ch_T0000356;gene_id=HG00140_ch_G0000079;Parent=HG00140_ch_T0000356;transcript_name=HG00140_ch_T0000356;gene_name=ENSG00000277930;ID=exon:HG00140_ch_T0000356:2;Name=ENSG00000277930;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	4675593	4682441	1000	-	.	source_transcript=ENST00000794104.1;source_transcript_name=ENST00000794104;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794104.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794104.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000794104.1,ENST00000794104.1;transcript_id=HG00140_ch_T0000357;gene_id=HG00140_ch_G0000079;Parent=HG00140_ch_G0000079;transcript_name=HG00140_ch_T0000357;gene_name=ENSG00000277930;ID=HG00140_ch_T0000357;Name=ENSG00000277930
HG00140_chrY	CAT	exon	4675593	4676447	.	-	.	source_transcript=ENST00000794104.1;source_transcript_name=ENST00000794104;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794104.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794104.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000794104.1,ENST00000794104.1;transcript_id=HG00140_ch_T0000357;gene_id=HG00140_ch_G0000079;Parent=HG00140_ch_T0000357;transcript_name=HG00140_ch_T0000357;gene_name=ENSG00000277930;ID=exon:HG00140_ch_T0000357:0;Name=ENSG00000277930;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	4676448	4679727	.	-	.	source_transcript=ENST00000794104.1;source_transcript_name=ENST00000794104;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794104.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794104.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000794104.1,ENST00000794104.1;transcript_id=HG00140_ch_T0000357;gene_id=HG00140_ch_G0000079;Parent=HG00140_ch_T0000357;transcript_name=HG00140_ch_T0000357;gene_name=ENSG00000277930;ID=intron:HG00140_ch_T0000357:0;Name=ENSG00000277930;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	4679728	4679901	.	-	.	source_transcript=ENST00000794104.1;source_transcript_name=ENST00000794104;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794104.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794104.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000794104.1,ENST00000794104.1;transcript_id=HG00140_ch_T0000357;gene_id=HG00140_ch_G0000079;Parent=HG00140_ch_T0000357;transcript_name=HG00140_ch_T0000357;gene_name=ENSG00000277930;ID=exon:HG00140_ch_T0000357:1;Name=ENSG00000277930;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	4679902	4682244	.	-	.	source_transcript=ENST00000794104.1;source_transcript_name=ENST00000794104;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794104.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794104.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000794104.1,ENST00000794104.1;transcript_id=HG00140_ch_T0000357;gene_id=HG00140_ch_G0000079;Parent=HG00140_ch_T0000357;transcript_name=HG00140_ch_T0000357;gene_name=ENSG00000277930;ID=intron:HG00140_ch_T0000357:1;Name=ENSG00000277930;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	4682245	4682441	.	-	.	source_transcript=ENST00000794104.1;source_transcript_name=ENST00000794104;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794104.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794104.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000794104.1,ENST00000794104.1;transcript_id=HG00140_ch_T0000357;gene_id=HG00140_ch_G0000079;Parent=HG00140_ch_T0000357;transcript_name=HG00140_ch_T0000357;gene_name=ENSG00000277930;ID=exon:HG00140_ch_T0000357:2;Name=ENSG00000277930;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	4676079	4679940	1000	-	.	source_transcript=ENST00000622595.1;source_transcript_name=ENST00000622595;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000622595.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000622595.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000622595.1,ENST00000622595.1;transcript_id=HG00140_ch_T0000358;gene_id=HG00140_ch_G0000079;Parent=HG00140_ch_G0000079;transcript_name=HG00140_ch_T0000358;gene_name=ENSG00000277930;ID=HG00140_ch_T0000358;Name=ENSG00000277930
HG00140_chrY	CAT	exon	4676079	4676447	.	-	.	source_transcript=ENST00000622595.1;source_transcript_name=ENST00000622595;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000622595.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000622595.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000622595.1,ENST00000622595.1;transcript_id=HG00140_ch_T0000358;gene_id=HG00140_ch_G0000079;Parent=HG00140_ch_T0000358;transcript_name=HG00140_ch_T0000358;gene_name=ENSG00000277930;ID=exon:HG00140_ch_T0000358:0;Name=ENSG00000277930;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	4676448	4679727	.	-	.	source_transcript=ENST00000622595.1;source_transcript_name=ENST00000622595;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000622595.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000622595.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000622595.1,ENST00000622595.1;transcript_id=HG00140_ch_T0000358;gene_id=HG00140_ch_G0000079;Parent=HG00140_ch_T0000358;transcript_name=HG00140_ch_T0000358;gene_name=ENSG00000277930;ID=intron:HG00140_ch_T0000358:0;Name=ENSG00000277930;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	4679728	4679940	.	-	.	source_transcript=ENST00000622595.1;source_transcript_name=ENST00000622595;source_gene=ENSG00000277930.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000277930.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000622595.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000622595.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277930;alternative_source_transcripts=ENST00000622595.1,ENST00000622595.1;transcript_id=HG00140_ch_T0000358;gene_id=HG00140_ch_G0000079;Parent=HG00140_ch_T0000358;transcript_name=HG00140_ch_T0000358;gene_name=ENSG00000277930;ID=exon:HG00140_ch_T0000358:1;Name=ENSG00000277930;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	4682449	5424940	.	+	.	source_gene_common_name=PCDH11Y;source_gene=ENSG00000099715.15;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;gene_id=HG00140_ch_G0000080;gene_biotype=protein_coding;gene_name=PCDH11Y;gene_sources=liftoff;ID=HG00140_ch_G0000080;Name=PCDH11Y
HG00140_chrY	CAT	transcript	4682449	4787687	100	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG00140_ch_T0000359;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_G0000080;transcript_name=HG00140_ch_T0000359;gene_name=PCDH11Y;ID=HG00140_ch_T0000359;Name=PCDH11Y
HG00140_chrY	CAT	exon	4682449	4682828	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG00140_ch_T0000359;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000359;transcript_name=HG00140_ch_T0000359;gene_name=PCDH11Y;ID=exon:HG00140_ch_T0000359:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	4682829	4714139	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG00140_ch_T0000359;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000359;transcript_name=HG00140_ch_T0000359;gene_name=PCDH11Y;ID=intron:HG00140_ch_T0000359:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	4714140	4714245	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG00140_ch_T0000359;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000359;transcript_name=HG00140_ch_T0000359;gene_name=PCDH11Y;ID=exon:HG00140_ch_T0000359:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	4714246	4714903	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG00140_ch_T0000359;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000359;transcript_name=HG00140_ch_T0000359;gene_name=PCDH11Y;ID=intron:HG00140_ch_T0000359:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	4714904	4714962	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG00140_ch_T0000359;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000359;transcript_name=HG00140_ch_T0000359;gene_name=PCDH11Y;ID=exon:HG00140_ch_T0000359:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	4714931	4714962	.	+	0	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG00140_ch_T0000359;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000359;transcript_name=HG00140_ch_T0000359;gene_name=PCDH11Y;ID=CDS:HG00140_ch_T0000359:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	4714931	4714933	.	+	0	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG00140_ch_T0000359;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000359;transcript_name=HG00140_ch_T0000359;gene_name=PCDH11Y;ID=start_codon:HG00140_ch_T0000359;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	4714963	4739122	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG00140_ch_T0000359;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000359;transcript_name=HG00140_ch_T0000359;gene_name=PCDH11Y;ID=intron:HG00140_ch_T0000359:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	4739123	4739693	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG00140_ch_T0000359;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000359;transcript_name=HG00140_ch_T0000359;gene_name=PCDH11Y;ID=exon:HG00140_ch_T0000359:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	4739123	4739693	.	+	1	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG00140_ch_T0000359;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000359;transcript_name=HG00140_ch_T0000359;gene_name=PCDH11Y;ID=CDS:HG00140_ch_T0000359:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	4739694	4780457	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG00140_ch_T0000359;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000359;transcript_name=HG00140_ch_T0000359;gene_name=PCDH11Y;ID=intron:HG00140_ch_T0000359:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	4780458	4782950	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG00140_ch_T0000359;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000359;transcript_name=HG00140_ch_T0000359;gene_name=PCDH11Y;ID=exon:HG00140_ch_T0000359:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	4780458	4782950	.	+	0	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG00140_ch_T0000359;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000359;transcript_name=HG00140_ch_T0000359;gene_name=PCDH11Y;ID=CDS:HG00140_ch_T0000359:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	4782951	4786586	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG00140_ch_T0000359;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000359;transcript_name=HG00140_ch_T0000359;gene_name=PCDH11Y;ID=intron:HG00140_ch_T0000359:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	4786587	4787687	.	+	.	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG00140_ch_T0000359;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000359;transcript_name=HG00140_ch_T0000359;gene_name=PCDH11Y;ID=exon:HG00140_ch_T0000359:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	4786587	4786604	.	+	0	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG00140_ch_T0000359;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000359;transcript_name=HG00140_ch_T0000359;gene_name=PCDH11Y;ID=CDS:HG00140_ch_T0000359:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	4786602	4786604	.	+	0	source_transcript=ENST00000333703.8;source_transcript_name=PCDH11Y-202;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000333703.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000333703.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000333703.8,ENST00000333703.8;transcript_id=HG00140_ch_T0000359;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000359;transcript_name=HG00140_ch_T0000359;gene_name=PCDH11Y;ID=stop_codon:HG00140_ch_T0000359;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	4682519	4787702	100	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG00140_ch_T0000360;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_G0000080;transcript_name=HG00140_ch_T0000360;gene_name=PCDH11Y;ID=HG00140_ch_T0000360;Name=PCDH11Y
HG00140_chrY	CAT	exon	4682519	4682828	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG00140_ch_T0000360;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000360;transcript_name=HG00140_ch_T0000360;gene_name=PCDH11Y;ID=exon:HG00140_ch_T0000360:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	4682829	4713132	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG00140_ch_T0000360;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000360;transcript_name=HG00140_ch_T0000360;gene_name=PCDH11Y;ID=intron:HG00140_ch_T0000360:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	4713133	4713301	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG00140_ch_T0000360;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000360;transcript_name=HG00140_ch_T0000360;gene_name=PCDH11Y;ID=exon:HG00140_ch_T0000360:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	4713302	4714139	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG00140_ch_T0000360;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000360;transcript_name=HG00140_ch_T0000360;gene_name=PCDH11Y;ID=intron:HG00140_ch_T0000360:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	4714140	4714245	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG00140_ch_T0000360;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000360;transcript_name=HG00140_ch_T0000360;gene_name=PCDH11Y;ID=exon:HG00140_ch_T0000360:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	4714246	4714903	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG00140_ch_T0000360;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000360;transcript_name=HG00140_ch_T0000360;gene_name=PCDH11Y;ID=intron:HG00140_ch_T0000360:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	4714904	4714962	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG00140_ch_T0000360;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000360;transcript_name=HG00140_ch_T0000360;gene_name=PCDH11Y;ID=exon:HG00140_ch_T0000360:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	4714931	4714962	.	+	0	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG00140_ch_T0000360;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000360;transcript_name=HG00140_ch_T0000360;gene_name=PCDH11Y;ID=CDS:HG00140_ch_T0000360:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	4714931	4714933	.	+	0	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG00140_ch_T0000360;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000360;transcript_name=HG00140_ch_T0000360;gene_name=PCDH11Y;ID=start_codon:HG00140_ch_T0000360;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	4714963	4739122	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG00140_ch_T0000360;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000360;transcript_name=HG00140_ch_T0000360;gene_name=PCDH11Y;ID=intron:HG00140_ch_T0000360:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	4739123	4739693	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG00140_ch_T0000360;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000360;transcript_name=HG00140_ch_T0000360;gene_name=PCDH11Y;ID=exon:HG00140_ch_T0000360:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	4739123	4739693	.	+	1	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG00140_ch_T0000360;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000360;transcript_name=HG00140_ch_T0000360;gene_name=PCDH11Y;ID=CDS:HG00140_ch_T0000360:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	4739694	4780457	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG00140_ch_T0000360;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000360;transcript_name=HG00140_ch_T0000360;gene_name=PCDH11Y;ID=intron:HG00140_ch_T0000360:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	4780458	4782950	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG00140_ch_T0000360;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000360;transcript_name=HG00140_ch_T0000360;gene_name=PCDH11Y;ID=exon:HG00140_ch_T0000360:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	4780458	4782950	.	+	0	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG00140_ch_T0000360;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000360;transcript_name=HG00140_ch_T0000360;gene_name=PCDH11Y;ID=CDS:HG00140_ch_T0000360:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	4782951	4786586	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG00140_ch_T0000360;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000360;transcript_name=HG00140_ch_T0000360;gene_name=PCDH11Y;ID=intron:HG00140_ch_T0000360:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	4786587	4787702	.	+	.	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG00140_ch_T0000360;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000360;transcript_name=HG00140_ch_T0000360;gene_name=PCDH11Y;ID=exon:HG00140_ch_T0000360:6;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	4786587	4786604	.	+	0	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG00140_ch_T0000360;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000360;transcript_name=HG00140_ch_T0000360;gene_name=PCDH11Y;ID=CDS:HG00140_ch_T0000360:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	4786602	4786604	.	+	0	source_transcript=ENST00000622698.4;source_transcript_name=PCDH11Y-207;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000622698.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000622698.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000622698.4,ENST00000622698.4;transcript_id=HG00140_ch_T0000360;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000360;transcript_name=HG00140_ch_T0000360;gene_name=PCDH11Y;ID=stop_codon:HG00140_ch_T0000360;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	4682519	5424940	100	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG00140_ch_T0000361;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_G0000080;transcript_name=HG00140_ch_T0000361;gene_name=PCDH11Y;ID=HG00140_ch_T0000361;Name=PCDH11Y
HG00140_chrY	CAT	exon	4682519	4682828	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG00140_ch_T0000361;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000361;transcript_name=HG00140_ch_T0000361;gene_name=PCDH11Y;ID=exon:HG00140_ch_T0000361:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	4682829	4739122	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG00140_ch_T0000361;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000361;transcript_name=HG00140_ch_T0000361;gene_name=PCDH11Y;ID=intron:HG00140_ch_T0000361:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	4739123	4739693	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG00140_ch_T0000361;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000361;transcript_name=HG00140_ch_T0000361;gene_name=PCDH11Y;ID=exon:HG00140_ch_T0000361:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	4739334	4739693	.	+	0	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG00140_ch_T0000361;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000361;transcript_name=HG00140_ch_T0000361;gene_name=PCDH11Y;ID=CDS:HG00140_ch_T0000361:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	4739334	4739336	.	+	0	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG00140_ch_T0000361;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000361;transcript_name=HG00140_ch_T0000361;gene_name=PCDH11Y;ID=start_codon:HG00140_ch_T0000361;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	4739694	4780457	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG00140_ch_T0000361;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000361;transcript_name=HG00140_ch_T0000361;gene_name=PCDH11Y;ID=intron:HG00140_ch_T0000361:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	4780458	4782950	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG00140_ch_T0000361;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000361;transcript_name=HG00140_ch_T0000361;gene_name=PCDH11Y;ID=exon:HG00140_ch_T0000361:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	4780458	4782950	.	+	0	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG00140_ch_T0000361;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000361;transcript_name=HG00140_ch_T0000361;gene_name=PCDH11Y;ID=CDS:HG00140_ch_T0000361:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	4782951	5183327	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG00140_ch_T0000361;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000361;transcript_name=HG00140_ch_T0000361;gene_name=PCDH11Y;ID=intron:HG00140_ch_T0000361:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5183328	5183526	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG00140_ch_T0000361;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000361;transcript_name=HG00140_ch_T0000361;gene_name=PCDH11Y;ID=exon:HG00140_ch_T0000361:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	5183328	5183526	.	+	0	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG00140_ch_T0000361;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000361;transcript_name=HG00140_ch_T0000361;gene_name=PCDH11Y;ID=CDS:HG00140_ch_T0000361:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5183527	5264483	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG00140_ch_T0000361;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000361;transcript_name=HG00140_ch_T0000361;gene_name=PCDH11Y;ID=intron:HG00140_ch_T0000361:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5264484	5264507	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG00140_ch_T0000361;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000361;transcript_name=HG00140_ch_T0000361;gene_name=PCDH11Y;ID=exon:HG00140_ch_T0000361:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	5264484	5264507	.	+	2	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG00140_ch_T0000361;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000361;transcript_name=HG00140_ch_T0000361;gene_name=PCDH11Y;ID=CDS:HG00140_ch_T0000361:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5264508	5419987	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG00140_ch_T0000361;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000361;transcript_name=HG00140_ch_T0000361;gene_name=PCDH11Y;ID=intron:HG00140_ch_T0000361:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5419988	5424940	.	+	.	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG00140_ch_T0000361;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000361;transcript_name=HG00140_ch_T0000361;gene_name=PCDH11Y;ID=exon:HG00140_ch_T0000361:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	5419988	5420658	.	+	2	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG00140_ch_T0000361;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000361;transcript_name=HG00140_ch_T0000361;gene_name=PCDH11Y;ID=CDS:HG00140_ch_T0000361:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	5420656	5420658	.	+	0	source_transcript=ENST00000698851.1;source_transcript_name=PCDH11Y-208;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698851.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698851.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698851.1,ENST00000698851.1;transcript_id=HG00140_ch_T0000361;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000361;transcript_name=HG00140_ch_T0000361;gene_name=PCDH11Y;ID=stop_codon:HG00140_ch_T0000361;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	4682519	4782508	100	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG00140_ch_T0000362;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_G0000080;transcript_name=HG00140_ch_T0000362;gene_name=PCDH11Y;ID=HG00140_ch_T0000362;Name=PCDH11Y
HG00140_chrY	CAT	exon	4682519	4682828	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG00140_ch_T0000362;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000362;transcript_name=HG00140_ch_T0000362;gene_name=PCDH11Y;ID=exon:HG00140_ch_T0000362:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	4682829	4713132	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG00140_ch_T0000362;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000362;transcript_name=HG00140_ch_T0000362;gene_name=PCDH11Y;ID=intron:HG00140_ch_T0000362:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	4713133	4713301	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG00140_ch_T0000362;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000362;transcript_name=HG00140_ch_T0000362;gene_name=PCDH11Y;ID=exon:HG00140_ch_T0000362:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	4713302	4713448	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG00140_ch_T0000362;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000362;transcript_name=HG00140_ch_T0000362;gene_name=PCDH11Y;ID=intron:HG00140_ch_T0000362:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	4713449	4713580	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG00140_ch_T0000362;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000362;transcript_name=HG00140_ch_T0000362;gene_name=PCDH11Y;ID=exon:HG00140_ch_T0000362:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	4713581	4714139	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG00140_ch_T0000362;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000362;transcript_name=HG00140_ch_T0000362;gene_name=PCDH11Y;ID=intron:HG00140_ch_T0000362:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	4714140	4714245	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG00140_ch_T0000362;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000362;transcript_name=HG00140_ch_T0000362;gene_name=PCDH11Y;ID=exon:HG00140_ch_T0000362:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	4714246	4714903	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG00140_ch_T0000362;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000362;transcript_name=HG00140_ch_T0000362;gene_name=PCDH11Y;ID=intron:HG00140_ch_T0000362:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	4714904	4714962	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG00140_ch_T0000362;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000362;transcript_name=HG00140_ch_T0000362;gene_name=PCDH11Y;ID=exon:HG00140_ch_T0000362:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	4714931	4714962	.	+	0	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG00140_ch_T0000362;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000362;transcript_name=HG00140_ch_T0000362;gene_name=PCDH11Y;ID=CDS:HG00140_ch_T0000362:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	4714931	4714933	.	+	0	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG00140_ch_T0000362;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000362;transcript_name=HG00140_ch_T0000362;gene_name=PCDH11Y;ID=start_codon:HG00140_ch_T0000362;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	4714963	4739122	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG00140_ch_T0000362;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000362;transcript_name=HG00140_ch_T0000362;gene_name=PCDH11Y;ID=intron:HG00140_ch_T0000362:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	4739123	4739693	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG00140_ch_T0000362;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000362;transcript_name=HG00140_ch_T0000362;gene_name=PCDH11Y;ID=exon:HG00140_ch_T0000362:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	4739123	4739693	.	+	1	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG00140_ch_T0000362;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000362;transcript_name=HG00140_ch_T0000362;gene_name=PCDH11Y;ID=CDS:HG00140_ch_T0000362:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	4739694	4780457	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG00140_ch_T0000362;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000362;transcript_name=HG00140_ch_T0000362;gene_name=PCDH11Y;ID=intron:HG00140_ch_T0000362:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	4780458	4782508	.	+	.	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG00140_ch_T0000362;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000362;transcript_name=HG00140_ch_T0000362;gene_name=PCDH11Y;ID=exon:HG00140_ch_T0000362:6;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	4780458	4782508	.	+	0	source_transcript=ENST00000698927.1;source_transcript_name=PCDH11Y-209;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000698927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000698927.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000698927.1,ENST00000698927.1;transcript_id=HG00140_ch_T0000362;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000362;transcript_name=HG00140_ch_T0000362;gene_name=PCDH11Y;ID=CDS:HG00140_ch_T0000362:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	4682613	4714181	1000	+	.	source_transcript=ENST00000620615.4;source_transcript_name=PCDH11Y-205;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000620615.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000620615.4;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000620615.4,ENST00000620615.4;transcript_id=HG00140_ch_T0000363;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_G0000080;transcript_name=HG00140_ch_T0000363;gene_name=PCDH11Y;ID=HG00140_ch_T0000363;Name=PCDH11Y
HG00140_chrY	CAT	exon	4682613	4682828	.	+	.	source_transcript=ENST00000620615.4;source_transcript_name=PCDH11Y-205;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000620615.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000620615.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000620615.4,ENST00000620615.4;transcript_id=HG00140_ch_T0000363;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000363;transcript_name=HG00140_ch_T0000363;gene_name=PCDH11Y;ID=exon:HG00140_ch_T0000363:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	4682829	4684910	.	+	.	source_transcript=ENST00000620615.4;source_transcript_name=PCDH11Y-205;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000620615.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000620615.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000620615.4,ENST00000620615.4;transcript_id=HG00140_ch_T0000363;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000363;transcript_name=HG00140_ch_T0000363;gene_name=PCDH11Y;ID=intron:HG00140_ch_T0000363:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	4684911	4684981	.	+	.	source_transcript=ENST00000620615.4;source_transcript_name=PCDH11Y-205;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000620615.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000620615.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000620615.4,ENST00000620615.4;transcript_id=HG00140_ch_T0000363;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000363;transcript_name=HG00140_ch_T0000363;gene_name=PCDH11Y;ID=exon:HG00140_ch_T0000363:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	4684982	4714139	.	+	.	source_transcript=ENST00000620615.4;source_transcript_name=PCDH11Y-205;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000620615.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000620615.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000620615.4,ENST00000620615.4;transcript_id=HG00140_ch_T0000363;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000363;transcript_name=HG00140_ch_T0000363;gene_name=PCDH11Y;ID=intron:HG00140_ch_T0000363:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	4714140	4714181	.	+	.	source_transcript=ENST00000620615.4;source_transcript_name=PCDH11Y-205;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000620615.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000620615.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000620615.4,ENST00000620615.4;transcript_id=HG00140_ch_T0000363;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000363;transcript_name=HG00140_ch_T0000363;gene_name=PCDH11Y;ID=exon:HG00140_ch_T0000363:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	4682623	4739322	100	+	.	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=HG00140_ch_T0000364;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_G0000080;transcript_name=HG00140_ch_T0000364;gene_name=PCDH11Y;ID=HG00140_ch_T0000364;Name=PCDH11Y
HG00140_chrY	CAT	exon	4682623	4682828	.	+	.	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=HG00140_ch_T0000364;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000364;transcript_name=HG00140_ch_T0000364;gene_name=PCDH11Y;ID=exon:HG00140_ch_T0000364:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	4682829	4684910	.	+	.	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=HG00140_ch_T0000364;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000364;transcript_name=HG00140_ch_T0000364;gene_name=PCDH11Y;ID=intron:HG00140_ch_T0000364:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	4684911	4684981	.	+	.	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=HG00140_ch_T0000364;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000364;transcript_name=HG00140_ch_T0000364;gene_name=PCDH11Y;ID=exon:HG00140_ch_T0000364:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	4684982	4714903	.	+	.	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=HG00140_ch_T0000364;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000364;transcript_name=HG00140_ch_T0000364;gene_name=PCDH11Y;ID=intron:HG00140_ch_T0000364:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	4714904	4714962	.	+	.	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=HG00140_ch_T0000364;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000364;transcript_name=HG00140_ch_T0000364;gene_name=PCDH11Y;ID=exon:HG00140_ch_T0000364:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	4714931	4714962	.	+	0	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=HG00140_ch_T0000364;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000364;transcript_name=HG00140_ch_T0000364;gene_name=PCDH11Y;ID=CDS:HG00140_ch_T0000364:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	4714931	4714933	.	+	0	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=HG00140_ch_T0000364;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000364;transcript_name=HG00140_ch_T0000364;gene_name=PCDH11Y;ID=start_codon:HG00140_ch_T0000364;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	4714963	4739122	.	+	.	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=HG00140_ch_T0000364;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000364;transcript_name=HG00140_ch_T0000364;gene_name=PCDH11Y;ID=intron:HG00140_ch_T0000364:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	4739123	4739322	.	+	.	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=HG00140_ch_T0000364;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000364;transcript_name=HG00140_ch_T0000364;gene_name=PCDH11Y;ID=exon:HG00140_ch_T0000364:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	4739123	4739322	.	+	1	source_transcript=ENST00000621505.1;source_transcript_name=PCDH11Y-206;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000621505.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000621505.1,ENST00000621505.1;transcript_id=HG00140_ch_T0000364;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000364;transcript_name=HG00140_ch_T0000364;gene_name=PCDH11Y;ID=CDS:HG00140_ch_T0000364:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	4738322	4783680	100	+	.	source_transcript=ENST00000215473.7;source_transcript_name=PCDH11Y-201;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000215473.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000215473.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000215473.7,ENST00000215473.7;transcript_id=HG00140_ch_T0000366;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_G0000080;transcript_name=HG00140_ch_T0000366;gene_name=PCDH11Y;ID=HG00140_ch_T0000366;Name=PCDH11Y
HG00140_chrY	CAT	exon	4738322	4739693	.	+	.	source_transcript=ENST00000215473.7;source_transcript_name=PCDH11Y-201;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000215473.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000215473.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000215473.7,ENST00000215473.7;transcript_id=HG00140_ch_T0000366;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000366;transcript_name=HG00140_ch_T0000366;gene_name=PCDH11Y;ID=exon:HG00140_ch_T0000366:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	4739058	4739693	.	+	0	source_transcript=ENST00000215473.7;source_transcript_name=PCDH11Y-201;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000215473.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000215473.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000215473.7,ENST00000215473.7;transcript_id=HG00140_ch_T0000366;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000366;transcript_name=HG00140_ch_T0000366;gene_name=PCDH11Y;ID=CDS:HG00140_ch_T0000366:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	4739058	4739060	.	+	0	source_transcript=ENST00000215473.7;source_transcript_name=PCDH11Y-201;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000215473.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000215473.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000215473.7,ENST00000215473.7;transcript_id=HG00140_ch_T0000366;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000366;transcript_name=HG00140_ch_T0000366;gene_name=PCDH11Y;ID=start_codon:HG00140_ch_T0000366;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	4739694	4780457	.	+	.	source_transcript=ENST00000215473.7;source_transcript_name=PCDH11Y-201;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000215473.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000215473.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000215473.7,ENST00000215473.7;transcript_id=HG00140_ch_T0000366;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000366;transcript_name=HG00140_ch_T0000366;gene_name=PCDH11Y;ID=intron:HG00140_ch_T0000366:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	4780458	4783680	.	+	.	source_transcript=ENST00000215473.7;source_transcript_name=PCDH11Y-201;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000215473.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000215473.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000215473.7,ENST00000215473.7;transcript_id=HG00140_ch_T0000366;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000366;transcript_name=HG00140_ch_T0000366;gene_name=PCDH11Y;ID=exon:HG00140_ch_T0000366:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	4780458	4782983	.	+	0	source_transcript=ENST00000215473.7;source_transcript_name=PCDH11Y-201;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000215473.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000215473.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000215473.7,ENST00000215473.7;transcript_id=HG00140_ch_T0000366;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000366;transcript_name=HG00140_ch_T0000366;gene_name=PCDH11Y;ID=CDS:HG00140_ch_T0000366:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	4782981	4782983	.	+	0	source_transcript=ENST00000215473.7;source_transcript_name=PCDH11Y-201;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000215473.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000215473.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000215473.7,ENST00000215473.7;transcript_id=HG00140_ch_T0000366;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000366;transcript_name=HG00140_ch_T0000366;gene_name=PCDH11Y;ID=stop_codon:HG00140_ch_T0000366;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	4738324	4786943	100	+	.	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=HG00140_ch_T0000367;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_G0000080;transcript_name=HG00140_ch_T0000367;gene_name=PCDH11Y;ID=HG00140_ch_T0000367;Name=PCDH11Y
HG00140_chrY	CAT	exon	4738324	4739693	.	+	.	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=HG00140_ch_T0000367;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000367;transcript_name=HG00140_ch_T0000367;gene_name=PCDH11Y;ID=exon:HG00140_ch_T0000367:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	4739058	4739693	.	+	0	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=HG00140_ch_T0000367;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000367;transcript_name=HG00140_ch_T0000367;gene_name=PCDH11Y;ID=CDS:HG00140_ch_T0000367:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	4739058	4739060	.	+	0	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=HG00140_ch_T0000367;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000367;transcript_name=HG00140_ch_T0000367;gene_name=PCDH11Y;ID=start_codon:HG00140_ch_T0000367;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	4739694	4780457	.	+	.	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=HG00140_ch_T0000367;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000367;transcript_name=HG00140_ch_T0000367;gene_name=PCDH11Y;ID=intron:HG00140_ch_T0000367:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	4780458	4782950	.	+	.	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=HG00140_ch_T0000367;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000367;transcript_name=HG00140_ch_T0000367;gene_name=PCDH11Y;ID=exon:HG00140_ch_T0000367:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	4780458	4782950	.	+	0	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=HG00140_ch_T0000367;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000367;transcript_name=HG00140_ch_T0000367;gene_name=PCDH11Y;ID=CDS:HG00140_ch_T0000367:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	4782951	4786586	.	+	.	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=HG00140_ch_T0000367;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000367;transcript_name=HG00140_ch_T0000367;gene_name=PCDH11Y;ID=intron:HG00140_ch_T0000367:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	4786587	4786943	.	+	.	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=HG00140_ch_T0000367;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000367;transcript_name=HG00140_ch_T0000367;gene_name=PCDH11Y;ID=exon:HG00140_ch_T0000367:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	4786587	4786604	.	+	0	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=HG00140_ch_T0000367;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000367;transcript_name=HG00140_ch_T0000367;gene_name=PCDH11Y;ID=CDS:HG00140_ch_T0000367:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	4786602	4786604	.	+	0	source_transcript=ENST00000362095.9;source_transcript_name=PCDH11Y-203;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362095.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000362095.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000362095.9,ENST00000362095.9;transcript_id=HG00140_ch_T0000367;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000367;transcript_name=HG00140_ch_T0000367;gene_name=PCDH11Y;ID=stop_codon:HG00140_ch_T0000367;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	4738324	5424940	100	+	.	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=HG00140_ch_T0000368;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_G0000080;transcript_name=HG00140_ch_T0000368;gene_name=PCDH11Y;ID=HG00140_ch_T0000368;Name=PCDH11Y
HG00140_chrY	CAT	exon	4738324	4739693	.	+	.	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=HG00140_ch_T0000368;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000368;transcript_name=HG00140_ch_T0000368;gene_name=PCDH11Y;ID=exon:HG00140_ch_T0000368:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	4739058	4739693	.	+	0	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=HG00140_ch_T0000368;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000368;transcript_name=HG00140_ch_T0000368;gene_name=PCDH11Y;ID=CDS:HG00140_ch_T0000368:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	4739058	4739060	.	+	0	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=HG00140_ch_T0000368;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000368;transcript_name=HG00140_ch_T0000368;gene_name=PCDH11Y;ID=start_codon:HG00140_ch_T0000368;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	4739694	4780457	.	+	.	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=HG00140_ch_T0000368;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000368;transcript_name=HG00140_ch_T0000368;gene_name=PCDH11Y;ID=intron:HG00140_ch_T0000368:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	4780458	4782950	.	+	.	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=HG00140_ch_T0000368;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000368;transcript_name=HG00140_ch_T0000368;gene_name=PCDH11Y;ID=exon:HG00140_ch_T0000368:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	4780458	4782950	.	+	0	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=HG00140_ch_T0000368;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000368;transcript_name=HG00140_ch_T0000368;gene_name=PCDH11Y;ID=CDS:HG00140_ch_T0000368:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	4782951	5183327	.	+	.	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=HG00140_ch_T0000368;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000368;transcript_name=HG00140_ch_T0000368;gene_name=PCDH11Y;ID=intron:HG00140_ch_T0000368:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5183328	5183526	.	+	.	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=HG00140_ch_T0000368;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000368;transcript_name=HG00140_ch_T0000368;gene_name=PCDH11Y;ID=exon:HG00140_ch_T0000368:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	5183328	5183526	.	+	0	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=HG00140_ch_T0000368;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000368;transcript_name=HG00140_ch_T0000368;gene_name=PCDH11Y;ID=CDS:HG00140_ch_T0000368:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5183527	5264483	.	+	.	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=HG00140_ch_T0000368;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000368;transcript_name=HG00140_ch_T0000368;gene_name=PCDH11Y;ID=intron:HG00140_ch_T0000368:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5264484	5264507	.	+	.	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=HG00140_ch_T0000368;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000368;transcript_name=HG00140_ch_T0000368;gene_name=PCDH11Y;ID=exon:HG00140_ch_T0000368:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	5264484	5264507	.	+	2	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=HG00140_ch_T0000368;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000368;transcript_name=HG00140_ch_T0000368;gene_name=PCDH11Y;ID=CDS:HG00140_ch_T0000368:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5264508	5419987	.	+	.	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=HG00140_ch_T0000368;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000368;transcript_name=HG00140_ch_T0000368;gene_name=PCDH11Y;ID=intron:HG00140_ch_T0000368:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5419988	5424940	.	+	.	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=HG00140_ch_T0000368;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000368;transcript_name=HG00140_ch_T0000368;gene_name=PCDH11Y;ID=exon:HG00140_ch_T0000368:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	5419988	5420658	.	+	2	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=HG00140_ch_T0000368;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000368;transcript_name=HG00140_ch_T0000368;gene_name=PCDH11Y;ID=CDS:HG00140_ch_T0000368:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	5420656	5420658	.	+	0	source_transcript=ENST00000400457.3;source_transcript_name=PCDH11Y-204;source_gene=ENSG00000099715.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099715.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000400457.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400457.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=ENST00000400457.3,ENST00000400457.3;transcript_id=HG00140_ch_T0000368;gene_id=HG00140_ch_G0000080;Parent=HG00140_ch_T0000368;transcript_name=HG00140_ch_T0000368;gene_name=PCDH11Y;ID=stop_codon:HG00140_ch_T0000368;Name=PCDH11Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	4701299	4701489	.	+	.	source_gene_common_name=RNU2-57P;source_gene=ENSG00000252468.1;alternative_source_transcripts=ENST00000516659.1,ENST00000516659.1;gene_id=HG00140_ch_G0000081;gene_biotype=snRNA;gene_name=RNU2-57P;gene_sources=liftoff;ID=HG00140_ch_G0000081;Name=RNU2-57P
HG00140_chrY	CAT	transcript	4701299	4701489	1000	+	.	source_transcript=ENST00000516659.1;source_transcript_name=RNU2-57P-201;source_gene=ENSG00000252468.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252468.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516659.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU2-57P;alternative_source_transcripts=ENST00000516659.1,ENST00000516659.1;transcript_id=HG00140_ch_T0000365;gene_id=HG00140_ch_G0000081;Parent=HG00140_ch_G0000081;transcript_name=HG00140_ch_T0000365;gene_name=RNU2-57P;ID=HG00140_ch_T0000365;Name=RNU2-57P
HG00140_chrY	CAT	exon	4701299	4701489	.	+	.	source_transcript=ENST00000516659.1;source_transcript_name=RNU2-57P-201;source_gene=ENSG00000252468.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252468.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516659.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU2-57P;alternative_source_transcripts=ENST00000516659.1,ENST00000516659.1;transcript_id=HG00140_ch_T0000365;gene_id=HG00140_ch_G0000081;Parent=HG00140_ch_T0000365;transcript_name=HG00140_ch_T0000365;gene_name=RNU2-57P;ID=exon:HG00140_ch_T0000365:0;Name=RNU2-57P;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	4889465	4890319	.	-	.	source_gene_common_name=VDAC1P6;source_gene=ENSG00000231341.1;alternative_source_transcripts=ENST00000430062.1,ENST00000430062.1;gene_id=HG00140_ch_G0000082;gene_biotype=processed_pseudogene;gene_name=VDAC1P6;gene_sources=liftoff;ID=HG00140_ch_G0000082;Name=VDAC1P6
HG00140_chrY	CAT	transcript	4889465	4890319	1000	-	.	source_transcript=ENST00000430062.1;source_transcript_name=VDAC1P6-201;source_gene=ENSG00000231341.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000231341.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000430062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430062.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VDAC1P6;alternative_source_transcripts=ENST00000430062.1,ENST00000430062.1;transcript_id=HG00140_ch_T0000369;gene_id=HG00140_ch_G0000082;Parent=HG00140_ch_G0000082;transcript_name=HG00140_ch_T0000369;gene_name=VDAC1P6;ID=HG00140_ch_T0000369;Name=VDAC1P6
HG00140_chrY	CAT	exon	4889465	4890319	.	-	.	source_transcript=ENST00000430062.1;source_transcript_name=VDAC1P6-201;source_gene=ENSG00000231341.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000231341.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000430062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430062.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VDAC1P6;alternative_source_transcripts=ENST00000430062.1,ENST00000430062.1;transcript_id=HG00140_ch_T0000369;gene_id=HG00140_ch_G0000082;Parent=HG00140_ch_T0000369;transcript_name=HG00140_ch_T0000369;gene_name=VDAC1P6;ID=exon:HG00140_ch_T0000369:0;Name=VDAC1P6;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	5020004	5021223	.	-	.	source_gene_common_name=EIF4A1P2;source_gene=ENSG00000235001.3;alternative_source_transcripts=ENST00000422633.1,ENST00000422633.1;gene_id=HG00140_ch_G0000083;gene_biotype=processed_pseudogene;gene_name=EIF4A1P2;gene_sources=liftoff;ID=HG00140_ch_G0000083;Name=EIF4A1P2
HG00140_chrY	CAT	transcript	5020004	5021223	1000	-	.	source_transcript=ENST00000422633.1;source_transcript_name=EIF4A1P2-201;source_gene=ENSG00000235001.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000235001.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000422633.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422633.1;transcript_score=199.918;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF4A1P2;alternative_source_transcripts=ENST00000422633.1,ENST00000422633.1;transcript_id=HG00140_ch_T0000370;gene_id=HG00140_ch_G0000083;Parent=HG00140_ch_G0000083;transcript_name=HG00140_ch_T0000370;gene_name=EIF4A1P2;ID=HG00140_ch_T0000370;Name=EIF4A1P2
HG00140_chrY	CAT	exon	5020004	5021223	.	-	.	source_transcript=ENST00000422633.1;source_transcript_name=EIF4A1P2-201;source_gene=ENSG00000235001.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000235001.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000422633.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422633.1;transcript_score=199.918;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF4A1P2;alternative_source_transcripts=ENST00000422633.1,ENST00000422633.1;transcript_id=HG00140_ch_T0000370;gene_id=HG00140_ch_G0000083;Parent=HG00140_ch_T0000370;transcript_name=HG00140_ch_T0000370;gene_name=EIF4A1P2;ID=exon:HG00140_ch_T0000370:0;Name=EIF4A1P2;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	5255854	5257140	.	+	.	source_gene_common_name=KRT18P10;source_gene=ENSG00000214207.2;alternative_source_transcripts=ENST00000388836.3,ENST00000388836.3;gene_id=HG00140_ch_G0000084;gene_biotype=processed_pseudogene;gene_name=KRT18P10;gene_sources=liftoff;ID=HG00140_ch_G0000084;Name=KRT18P10
HG00140_chrY	CAT	transcript	5255854	5257140	1000	+	.	source_transcript=ENST00000388836.3;source_transcript_name=KRT18P10-201;source_gene=ENSG00000214207.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000214207.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000388836.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000388836.3;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KRT18P10;alternative_source_transcripts=ENST00000388836.3,ENST00000388836.3;transcript_id=HG00140_ch_T0000371;gene_id=HG00140_ch_G0000084;Parent=HG00140_ch_G0000084;transcript_name=HG00140_ch_T0000371;gene_name=KRT18P10;ID=HG00140_ch_T0000371;Name=KRT18P10
HG00140_chrY	CAT	exon	5255854	5257140	.	+	.	source_transcript=ENST00000388836.3;source_transcript_name=KRT18P10-201;source_gene=ENSG00000214207.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000214207.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000388836.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000388836.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KRT18P10;alternative_source_transcripts=ENST00000388836.3,ENST00000388836.3;transcript_id=HG00140_ch_T0000371;gene_id=HG00140_ch_G0000084;Parent=HG00140_ch_T0000371;transcript_name=HG00140_ch_T0000371;gene_name=KRT18P10;ID=exon:HG00140_ch_T0000371:0;Name=KRT18P10;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	5317199	5317374	.	-	.	source_gene_common_name=SNX3P1Y;source_gene=ENSG00000278585.1;alternative_source_transcripts=ENST00000615757.1,ENST00000615757.1;gene_id=HG00140_ch_G0000085;gene_biotype=processed_pseudogene;gene_name=SNX3P1Y;gene_sources=liftoff;ID=HG00140_ch_G0000085;Name=SNX3P1Y
HG00140_chrY	CAT	transcript	5317199	5317374	1000	-	.	source_transcript=ENST00000615757.1;source_transcript_name=SNX3P1Y-201;source_gene=ENSG00000278585.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000278585.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000615757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615757.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SNX3P1Y;alternative_source_transcripts=ENST00000615757.1,ENST00000615757.1;transcript_id=HG00140_ch_T0000372;gene_id=HG00140_ch_G0000085;Parent=HG00140_ch_G0000085;transcript_name=HG00140_ch_T0000372;gene_name=SNX3P1Y;ID=HG00140_ch_T0000372;Name=SNX3P1Y
HG00140_chrY	CAT	exon	5317199	5317374	.	-	.	source_transcript=ENST00000615757.1;source_transcript_name=SNX3P1Y-201;source_gene=ENSG00000278585.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000278585.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000615757.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615757.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SNX3P1Y;alternative_source_transcripts=ENST00000615757.1,ENST00000615757.1;transcript_id=HG00140_ch_T0000372;gene_id=HG00140_ch_G0000085;Parent=HG00140_ch_T0000372;transcript_name=HG00140_ch_T0000372;gene_name=SNX3P1Y;ID=exon:HG00140_ch_T0000372:0;Name=SNX3P1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	5476022	5476459	.	-	.	source_gene_common_name=RPL26P37;source_gene=ENSG00000235175.1;alternative_source_transcripts=ENST00000411983.1,ENST00000411983.1;gene_id=HG00140_ch_G0000086;gene_biotype=processed_pseudogene;gene_name=RPL26P37;gene_sources=liftoff;ID=HG00140_ch_G0000086;Name=RPL26P37
HG00140_chrY	CAT	transcript	5476022	5476459	1000	-	.	source_transcript=ENST00000411983.1;source_transcript_name=RPL26P37-201;source_gene=ENSG00000235175.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000235175.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000411983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411983.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPL26P37;alternative_source_transcripts=ENST00000411983.1,ENST00000411983.1;transcript_id=HG00140_ch_T0000373;gene_id=HG00140_ch_G0000086;Parent=HG00140_ch_G0000086;transcript_name=HG00140_ch_T0000373;gene_name=RPL26P37;ID=HG00140_ch_T0000373;Name=RPL26P37
HG00140_chrY	CAT	exon	5476022	5476459	.	-	.	source_transcript=ENST00000411983.1;source_transcript_name=RPL26P37-201;source_gene=ENSG00000235175.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000235175.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000411983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411983.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPL26P37;alternative_source_transcripts=ENST00000411983.1,ENST00000411983.1;transcript_id=HG00140_ch_T0000373;gene_id=HG00140_ch_G0000086;Parent=HG00140_ch_T0000373;transcript_name=HG00140_ch_T0000373;gene_name=RPL26P37;ID=exon:HG00140_ch_T0000373:0;Name=RPL26P37;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	5570223	5571459	.	+	.	source_gene_common_name=TUSC2P1;source_gene=ENSG00000285470.1;alternative_source_transcripts=ENST00000645906.1,ENST00000645906.1;gene_id=HG00140_ch_G0000087;gene_biotype=processed_pseudogene;gene_name=TUSC2P1;gene_sources=liftoff;ID=HG00140_ch_G0000087;Name=TUSC2P1
HG00140_chrY	CAT	transcript	5570223	5571459	1000	+	.	source_transcript=ENST00000645906.1;source_transcript_name=TUSC2P1-201;source_gene=ENSG00000285470.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000285470.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000645906.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000645906.1;transcript_score=199.83800000000002;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUSC2P1;alternative_source_transcripts=ENST00000645906.1,ENST00000645906.1;transcript_id=HG00140_ch_T0000374;gene_id=HG00140_ch_G0000087;Parent=HG00140_ch_G0000087;transcript_name=HG00140_ch_T0000374;gene_name=TUSC2P1;ID=HG00140_ch_T0000374;Name=TUSC2P1
HG00140_chrY	CAT	exon	5570223	5571459	.	+	.	source_transcript=ENST00000645906.1;source_transcript_name=TUSC2P1-201;source_gene=ENSG00000285470.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000285470.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000645906.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000645906.1;transcript_score=199.83800000000002;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUSC2P1;alternative_source_transcripts=ENST00000645906.1,ENST00000645906.1;transcript_id=HG00140_ch_T0000374;gene_id=HG00140_ch_G0000087;Parent=HG00140_ch_T0000374;transcript_name=HG00140_ch_T0000374;gene_name=TUSC2P1;ID=exon:HG00140_ch_T0000374:0;Name=TUSC2P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	5841498	5841961	.	+	.	source_gene_common_name=DLGAP5P1;source_gene=ENSG00000237195.1;alternative_source_transcripts=ENST00000430307.1,ENST00000430307.1;gene_id=HG00140_ch_G0000088;gene_biotype=processed_pseudogene;gene_name=DLGAP5P1;gene_sources=liftoff;ID=HG00140_ch_G0000088;Name=DLGAP5P1
HG00140_chrY	CAT	transcript	5841498	5841961	1000	+	.	source_transcript=ENST00000430307.1;source_transcript_name=DLGAP5P1-201;source_gene=ENSG00000237195.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237195.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000430307.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430307.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DLGAP5P1;alternative_source_transcripts=ENST00000430307.1,ENST00000430307.1;transcript_id=HG00140_ch_T0000375;gene_id=HG00140_ch_G0000088;Parent=HG00140_ch_G0000088;transcript_name=HG00140_ch_T0000375;gene_name=DLGAP5P1;ID=HG00140_ch_T0000375;Name=DLGAP5P1
HG00140_chrY	CAT	exon	5841498	5841961	.	+	.	source_transcript=ENST00000430307.1;source_transcript_name=DLGAP5P1-201;source_gene=ENSG00000237195.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237195.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000430307.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430307.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DLGAP5P1;alternative_source_transcripts=ENST00000430307.1,ENST00000430307.1;transcript_id=HG00140_ch_T0000375;gene_id=HG00140_ch_G0000088;Parent=HG00140_ch_T0000375;transcript_name=HG00140_ch_T0000375;gene_name=DLGAP5P1;ID=exon:HG00140_ch_T0000375:0;Name=DLGAP5P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	5923974	5928795	.	-	.	source_gene_common_name=TTTY23;source_gene=ENSG00000239225.2;gene_id=HG00140_ch_G0000089;gene_biotype=lncRNA;gene_name=TTTY23;gene_sources=liftoff;ID=HG00140_ch_G0000089;Name=TTTY23
HG00140_chrY	CAT	transcript	5923974	5928795	1000	-	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG00140_ch_T0000376;gene_id=HG00140_ch_G0000089;Parent=HG00140_ch_G0000089;transcript_name=HG00140_ch_T0000376;gene_name=TTTY23;ID=HG00140_ch_T0000376;Name=TTTY23
HG00140_chrY	CAT	exon	5923974	5924569	.	-	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG00140_ch_T0000376;gene_id=HG00140_ch_G0000089;Parent=HG00140_ch_T0000376;transcript_name=HG00140_ch_T0000376;gene_name=TTTY23;ID=exon:HG00140_ch_T0000376:0;Name=TTTY23;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5924570	5925121	.	-	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG00140_ch_T0000376;gene_id=HG00140_ch_G0000089;Parent=HG00140_ch_T0000376;transcript_name=HG00140_ch_T0000376;gene_name=TTTY23;ID=intron:HG00140_ch_T0000376:0;Name=TTTY23;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5925122	5925229	.	-	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG00140_ch_T0000376;gene_id=HG00140_ch_G0000089;Parent=HG00140_ch_T0000376;transcript_name=HG00140_ch_T0000376;gene_name=TTTY23;ID=exon:HG00140_ch_T0000376:1;Name=TTTY23;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5925230	5925409	.	-	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG00140_ch_T0000376;gene_id=HG00140_ch_G0000089;Parent=HG00140_ch_T0000376;transcript_name=HG00140_ch_T0000376;gene_name=TTTY23;ID=intron:HG00140_ch_T0000376:1;Name=TTTY23;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5925410	5925462	.	-	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG00140_ch_T0000376;gene_id=HG00140_ch_G0000089;Parent=HG00140_ch_T0000376;transcript_name=HG00140_ch_T0000376;gene_name=TTTY23;ID=exon:HG00140_ch_T0000376:2;Name=TTTY23;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5925463	5926002	.	-	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG00140_ch_T0000376;gene_id=HG00140_ch_G0000089;Parent=HG00140_ch_T0000376;transcript_name=HG00140_ch_T0000376;gene_name=TTTY23;ID=intron:HG00140_ch_T0000376:2;Name=TTTY23;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5926003	5926148	.	-	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG00140_ch_T0000376;gene_id=HG00140_ch_G0000089;Parent=HG00140_ch_T0000376;transcript_name=HG00140_ch_T0000376;gene_name=TTTY23;ID=exon:HG00140_ch_T0000376:3;Name=TTTY23;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5926149	5926261	.	-	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG00140_ch_T0000376;gene_id=HG00140_ch_G0000089;Parent=HG00140_ch_T0000376;transcript_name=HG00140_ch_T0000376;gene_name=TTTY23;ID=intron:HG00140_ch_T0000376:3;Name=TTTY23;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5926262	5926351	.	-	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG00140_ch_T0000376;gene_id=HG00140_ch_G0000089;Parent=HG00140_ch_T0000376;transcript_name=HG00140_ch_T0000376;gene_name=TTTY23;ID=exon:HG00140_ch_T0000376:4;Name=TTTY23;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5926352	5926546	.	-	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG00140_ch_T0000376;gene_id=HG00140_ch_G0000089;Parent=HG00140_ch_T0000376;transcript_name=HG00140_ch_T0000376;gene_name=TTTY23;ID=intron:HG00140_ch_T0000376:4;Name=TTTY23;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5926547	5926669	.	-	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG00140_ch_T0000376;gene_id=HG00140_ch_G0000089;Parent=HG00140_ch_T0000376;transcript_name=HG00140_ch_T0000376;gene_name=TTTY23;ID=exon:HG00140_ch_T0000376:5;Name=TTTY23;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5926670	5928613	.	-	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG00140_ch_T0000376;gene_id=HG00140_ch_G0000089;Parent=HG00140_ch_T0000376;transcript_name=HG00140_ch_T0000376;gene_name=TTTY23;ID=intron:HG00140_ch_T0000376:5;Name=TTTY23;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5928614	5928795	.	-	.	source_transcript=ENST00000728297.1;source_transcript_name=TTTY23-202;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728297.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG00140_ch_T0000376;gene_id=HG00140_ch_G0000089;Parent=HG00140_ch_T0000376;transcript_name=HG00140_ch_T0000376;gene_name=TTTY23;ID=exon:HG00140_ch_T0000376:6;Name=TTTY23;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	5924151	5928777	1000	-	.	source_transcript=ENST00000728299.1;source_transcript_name=TTTY23-204;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728299.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG00140_ch_T0000377;gene_id=HG00140_ch_G0000089;Parent=HG00140_ch_G0000089;transcript_name=HG00140_ch_T0000377;gene_name=TTTY23;ID=HG00140_ch_T0000377;Name=TTTY23
HG00140_chrY	CAT	exon	5924151	5924569	.	-	.	source_transcript=ENST00000728299.1;source_transcript_name=TTTY23-204;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728299.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG00140_ch_T0000377;gene_id=HG00140_ch_G0000089;Parent=HG00140_ch_T0000377;transcript_name=HG00140_ch_T0000377;gene_name=TTTY23;ID=exon:HG00140_ch_T0000377:0;Name=TTTY23;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5924570	5925121	.	-	.	source_transcript=ENST00000728299.1;source_transcript_name=TTTY23-204;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728299.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG00140_ch_T0000377;gene_id=HG00140_ch_G0000089;Parent=HG00140_ch_T0000377;transcript_name=HG00140_ch_T0000377;gene_name=TTTY23;ID=intron:HG00140_ch_T0000377:0;Name=TTTY23;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5925122	5925229	.	-	.	source_transcript=ENST00000728299.1;source_transcript_name=TTTY23-204;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728299.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG00140_ch_T0000377;gene_id=HG00140_ch_G0000089;Parent=HG00140_ch_T0000377;transcript_name=HG00140_ch_T0000377;gene_name=TTTY23;ID=exon:HG00140_ch_T0000377:1;Name=TTTY23;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5925230	5926002	.	-	.	source_transcript=ENST00000728299.1;source_transcript_name=TTTY23-204;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728299.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG00140_ch_T0000377;gene_id=HG00140_ch_G0000089;Parent=HG00140_ch_T0000377;transcript_name=HG00140_ch_T0000377;gene_name=TTTY23;ID=intron:HG00140_ch_T0000377:1;Name=TTTY23;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5926003	5926148	.	-	.	source_transcript=ENST00000728299.1;source_transcript_name=TTTY23-204;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728299.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG00140_ch_T0000377;gene_id=HG00140_ch_G0000089;Parent=HG00140_ch_T0000377;transcript_name=HG00140_ch_T0000377;gene_name=TTTY23;ID=exon:HG00140_ch_T0000377:2;Name=TTTY23;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5926149	5926261	.	-	.	source_transcript=ENST00000728299.1;source_transcript_name=TTTY23-204;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728299.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG00140_ch_T0000377;gene_id=HG00140_ch_G0000089;Parent=HG00140_ch_T0000377;transcript_name=HG00140_ch_T0000377;gene_name=TTTY23;ID=intron:HG00140_ch_T0000377:2;Name=TTTY23;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5926262	5926351	.	-	.	source_transcript=ENST00000728299.1;source_transcript_name=TTTY23-204;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728299.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG00140_ch_T0000377;gene_id=HG00140_ch_G0000089;Parent=HG00140_ch_T0000377;transcript_name=HG00140_ch_T0000377;gene_name=TTTY23;ID=exon:HG00140_ch_T0000377:3;Name=TTTY23;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5926352	5928613	.	-	.	source_transcript=ENST00000728299.1;source_transcript_name=TTTY23-204;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728299.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG00140_ch_T0000377;gene_id=HG00140_ch_G0000089;Parent=HG00140_ch_T0000377;transcript_name=HG00140_ch_T0000377;gene_name=TTTY23;ID=intron:HG00140_ch_T0000377:3;Name=TTTY23;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5928614	5928777	.	-	.	source_transcript=ENST00000728299.1;source_transcript_name=TTTY23-204;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728299.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG00140_ch_T0000377;gene_id=HG00140_ch_G0000089;Parent=HG00140_ch_T0000377;transcript_name=HG00140_ch_T0000377;gene_name=TTTY23;ID=exon:HG00140_ch_T0000377:4;Name=TTTY23;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	5924151	5928777	1000	-	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG00140_ch_T0000378;gene_id=HG00140_ch_G0000089;Parent=HG00140_ch_G0000089;transcript_name=HG00140_ch_T0000378;gene_name=TTTY23;ID=HG00140_ch_T0000378;Name=TTTY23
HG00140_chrY	CAT	exon	5924151	5924569	.	-	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG00140_ch_T0000378;gene_id=HG00140_ch_G0000089;Parent=HG00140_ch_T0000378;transcript_name=HG00140_ch_T0000378;gene_name=TTTY23;ID=exon:HG00140_ch_T0000378:0;Name=TTTY23;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5924570	5925121	.	-	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG00140_ch_T0000378;gene_id=HG00140_ch_G0000089;Parent=HG00140_ch_T0000378;transcript_name=HG00140_ch_T0000378;gene_name=TTTY23;ID=intron:HG00140_ch_T0000378:0;Name=TTTY23;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5925122	5925229	.	-	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG00140_ch_T0000378;gene_id=HG00140_ch_G0000089;Parent=HG00140_ch_T0000378;transcript_name=HG00140_ch_T0000378;gene_name=TTTY23;ID=exon:HG00140_ch_T0000378:1;Name=TTTY23;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5925230	5926002	.	-	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG00140_ch_T0000378;gene_id=HG00140_ch_G0000089;Parent=HG00140_ch_T0000378;transcript_name=HG00140_ch_T0000378;gene_name=TTTY23;ID=intron:HG00140_ch_T0000378:1;Name=TTTY23;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5926003	5926148	.	-	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG00140_ch_T0000378;gene_id=HG00140_ch_G0000089;Parent=HG00140_ch_T0000378;transcript_name=HG00140_ch_T0000378;gene_name=TTTY23;ID=exon:HG00140_ch_T0000378:2;Name=TTTY23;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5926149	5926261	.	-	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG00140_ch_T0000378;gene_id=HG00140_ch_G0000089;Parent=HG00140_ch_T0000378;transcript_name=HG00140_ch_T0000378;gene_name=TTTY23;ID=intron:HG00140_ch_T0000378:2;Name=TTTY23;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5926262	5926351	.	-	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG00140_ch_T0000378;gene_id=HG00140_ch_G0000089;Parent=HG00140_ch_T0000378;transcript_name=HG00140_ch_T0000378;gene_name=TTTY23;ID=exon:HG00140_ch_T0000378:3;Name=TTTY23;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5926352	5926546	.	-	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG00140_ch_T0000378;gene_id=HG00140_ch_G0000089;Parent=HG00140_ch_T0000378;transcript_name=HG00140_ch_T0000378;gene_name=TTTY23;ID=intron:HG00140_ch_T0000378:3;Name=TTTY23;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5926547	5926669	.	-	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG00140_ch_T0000378;gene_id=HG00140_ch_G0000089;Parent=HG00140_ch_T0000378;transcript_name=HG00140_ch_T0000378;gene_name=TTTY23;ID=exon:HG00140_ch_T0000378:4;Name=TTTY23;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5926670	5928613	.	-	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG00140_ch_T0000378;gene_id=HG00140_ch_G0000089;Parent=HG00140_ch_T0000378;transcript_name=HG00140_ch_T0000378;gene_name=TTTY23;ID=intron:HG00140_ch_T0000378:4;Name=TTTY23;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5928614	5928777	.	-	.	source_transcript=ENST00000728298.1;source_transcript_name=TTTY23-203;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000728298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000728298.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG00140_ch_T0000378;gene_id=HG00140_ch_G0000089;Parent=HG00140_ch_T0000378;transcript_name=HG00140_ch_T0000378;gene_name=TTTY23;ID=exon:HG00140_ch_T0000378:5;Name=TTTY23;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	5925154	5926318	1000	-	.	source_transcript=ENST00000452889.1;source_transcript_name=TTTY23-201;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452889.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG00140_ch_T0000379;gene_id=HG00140_ch_G0000089;Parent=HG00140_ch_G0000089;transcript_name=HG00140_ch_T0000379;gene_name=TTTY23;ID=HG00140_ch_T0000379;Name=TTTY23
HG00140_chrY	CAT	exon	5925154	5925462	.	-	.	source_transcript=ENST00000452889.1;source_transcript_name=TTTY23-201;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG00140_ch_T0000379;gene_id=HG00140_ch_G0000089;Parent=HG00140_ch_T0000379;transcript_name=HG00140_ch_T0000379;gene_name=TTTY23;ID=exon:HG00140_ch_T0000379:0;Name=TTTY23;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5925463	5926002	.	-	.	source_transcript=ENST00000452889.1;source_transcript_name=TTTY23-201;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG00140_ch_T0000379;gene_id=HG00140_ch_G0000089;Parent=HG00140_ch_T0000379;transcript_name=HG00140_ch_T0000379;gene_name=TTTY23;ID=intron:HG00140_ch_T0000379:0;Name=TTTY23;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5926003	5926148	.	-	.	source_transcript=ENST00000452889.1;source_transcript_name=TTTY23-201;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG00140_ch_T0000379;gene_id=HG00140_ch_G0000089;Parent=HG00140_ch_T0000379;transcript_name=HG00140_ch_T0000379;gene_name=TTTY23;ID=exon:HG00140_ch_T0000379:1;Name=TTTY23;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5926149	5926261	.	-	.	source_transcript=ENST00000452889.1;source_transcript_name=TTTY23-201;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG00140_ch_T0000379;gene_id=HG00140_ch_G0000089;Parent=HG00140_ch_T0000379;transcript_name=HG00140_ch_T0000379;gene_name=TTTY23;ID=intron:HG00140_ch_T0000379:1;Name=TTTY23;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5926262	5926318	.	-	.	source_transcript=ENST00000452889.1;source_transcript_name=TTTY23-201;source_gene=ENSG00000239225.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000239225.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;transcript_id=HG00140_ch_T0000379;gene_id=HG00140_ch_G0000089;Parent=HG00140_ch_T0000379;transcript_name=HG00140_ch_T0000379;gene_name=TTTY23;ID=exon:HG00140_ch_T0000379:2;Name=TTTY23;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	5928977	5931521	.	+	.	source_gene_common_name=TSPY13P;source_gene=ENSG00000187657.6;gene_id=HG00140_ch_G0000090;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY13P;gene_sources=liftoff;ID=HG00140_ch_G0000090;Name=TSPY13P
HG00140_chrY	CAT	transcript	5928977	5931521	1000	+	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=HG00140_ch_T0000380;gene_id=HG00140_ch_G0000090;Parent=HG00140_ch_G0000090;transcript_name=HG00140_ch_T0000380;gene_name=TSPY13P;ID=HG00140_ch_T0000380;Name=TSPY13P
HG00140_chrY	CAT	exon	5928977	5929453	.	+	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=HG00140_ch_T0000380;gene_id=HG00140_ch_G0000090;Parent=HG00140_ch_T0000380;transcript_name=HG00140_ch_T0000380;gene_name=TSPY13P;ID=exon:HG00140_ch_T0000380:0;Name=TSPY13P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5929454	5930059	.	+	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=HG00140_ch_T0000380;gene_id=HG00140_ch_G0000090;Parent=HG00140_ch_T0000380;transcript_name=HG00140_ch_T0000380;gene_name=TSPY13P;ID=intron:HG00140_ch_T0000380:0;Name=TSPY13P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5930060	5930137	.	+	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=HG00140_ch_T0000380;gene_id=HG00140_ch_G0000090;Parent=HG00140_ch_T0000380;transcript_name=HG00140_ch_T0000380;gene_name=TSPY13P;ID=exon:HG00140_ch_T0000380:1;Name=TSPY13P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5930138	5930265	.	+	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=HG00140_ch_T0000380;gene_id=HG00140_ch_G0000090;Parent=HG00140_ch_T0000380;transcript_name=HG00140_ch_T0000380;gene_name=TSPY13P;ID=intron:HG00140_ch_T0000380:1;Name=TSPY13P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5930266	5930376	.	+	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=HG00140_ch_T0000380;gene_id=HG00140_ch_G0000090;Parent=HG00140_ch_T0000380;transcript_name=HG00140_ch_T0000380;gene_name=TSPY13P;ID=exon:HG00140_ch_T0000380:2;Name=TSPY13P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5930377	5930475	.	+	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=HG00140_ch_T0000380;gene_id=HG00140_ch_G0000090;Parent=HG00140_ch_T0000380;transcript_name=HG00140_ch_T0000380;gene_name=TSPY13P;ID=intron:HG00140_ch_T0000380:2;Name=TSPY13P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5930476	5930618	.	+	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=HG00140_ch_T0000380;gene_id=HG00140_ch_G0000090;Parent=HG00140_ch_T0000380;transcript_name=HG00140_ch_T0000380;gene_name=TSPY13P;ID=exon:HG00140_ch_T0000380:3;Name=TSPY13P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5930619	5930727	.	+	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=HG00140_ch_T0000380;gene_id=HG00140_ch_G0000090;Parent=HG00140_ch_T0000380;transcript_name=HG00140_ch_T0000380;gene_name=TSPY13P;ID=intron:HG00140_ch_T0000380:3;Name=TSPY13P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5930728	5930812	.	+	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=HG00140_ch_T0000380;gene_id=HG00140_ch_G0000090;Parent=HG00140_ch_T0000380;transcript_name=HG00140_ch_T0000380;gene_name=TSPY13P;ID=exon:HG00140_ch_T0000380:4;Name=TSPY13P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5930813	5931501	.	+	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=HG00140_ch_T0000380;gene_id=HG00140_ch_G0000090;Parent=HG00140_ch_T0000380;transcript_name=HG00140_ch_T0000380;gene_name=TSPY13P;ID=intron:HG00140_ch_T0000380:4;Name=TSPY13P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5931502	5931521	.	+	.	source_transcript=ENST00000338964.6;source_transcript_name=TSPY13P-201;source_gene=ENSG00000187657.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000187657.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000338964.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000338964.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY13P;transcript_id=HG00140_ch_T0000380;gene_id=HG00140_ch_G0000090;Parent=HG00140_ch_T0000380;transcript_name=HG00140_ch_T0000380;gene_name=TSPY13P;ID=exon:HG00140_ch_T0000380:5;Name=TSPY13P;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	5928979	5938330	.	+	.	source_gene_common_name=ENSG00000309435;source_gene=ENSG00000309435.1;gene_id=HG00140_ch_G0000091;gene_biotype=lncRNA;gene_name=ENSG00000309435;gene_sources=liftoff;ID=HG00140_ch_G0000091;Name=ENSG00000309435
HG00140_chrY	CAT	transcript	5928979	5937607	1000	+	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000381;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_G0000091;transcript_name=HG00140_ch_T0000381;gene_name=ENSG00000309435;ID=HG00140_ch_T0000381;Name=ENSG00000309435
HG00140_chrY	CAT	exon	5928979	5929063	.	+	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000381;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000381;transcript_name=HG00140_ch_T0000381;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000381:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5929064	5929486	.	+	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000381;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000381;transcript_name=HG00140_ch_T0000381;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000381:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5929487	5929729	.	+	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000381;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000381;transcript_name=HG00140_ch_T0000381;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000381:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5929730	5930077	.	+	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000381;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000381;transcript_name=HG00140_ch_T0000381;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000381:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5930078	5930137	.	+	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000381;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000381;transcript_name=HG00140_ch_T0000381;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000381:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5930138	5930265	.	+	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000381;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000381;transcript_name=HG00140_ch_T0000381;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000381:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5930266	5930376	.	+	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000381;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000381;transcript_name=HG00140_ch_T0000381;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000381:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5930377	5930725	.	+	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000381;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000381;transcript_name=HG00140_ch_T0000381;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000381:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5930726	5930848	.	+	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000381;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000381;transcript_name=HG00140_ch_T0000381;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000381:4;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5930849	5931501	.	+	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000381;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000381;transcript_name=HG00140_ch_T0000381;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000381:4;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5931502	5931515	.	+	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000381;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000381;transcript_name=HG00140_ch_T0000381;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000381:5;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5931516	5932937	.	+	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000381;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000381;transcript_name=HG00140_ch_T0000381;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000381:5;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5932938	5933033	.	+	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000381;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000381;transcript_name=HG00140_ch_T0000381;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000381:6;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5933034	5936991	.	+	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000381;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000381;transcript_name=HG00140_ch_T0000381;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000381:6;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5936992	5937607	.	+	.	source_transcript=ENST00000841129.1;source_transcript_name=ENST00000841129;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000381;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000381;transcript_name=HG00140_ch_T0000381;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000381:7;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	5928986	5937607	1000	+	.	source_transcript=ENST00000841130.1;source_transcript_name=ENST00000841130;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841130.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000382;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_G0000091;transcript_name=HG00140_ch_T0000382;gene_name=ENSG00000309435;ID=HG00140_ch_T0000382;Name=ENSG00000309435
HG00140_chrY	CAT	exon	5928986	5929063	.	+	.	source_transcript=ENST00000841130.1;source_transcript_name=ENST00000841130;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000382;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000382;transcript_name=HG00140_ch_T0000382;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000382:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5929064	5929486	.	+	.	source_transcript=ENST00000841130.1;source_transcript_name=ENST00000841130;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000382;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000382;transcript_name=HG00140_ch_T0000382;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000382:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5929487	5929729	.	+	.	source_transcript=ENST00000841130.1;source_transcript_name=ENST00000841130;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000382;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000382;transcript_name=HG00140_ch_T0000382;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000382:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5929730	5930265	.	+	.	source_transcript=ENST00000841130.1;source_transcript_name=ENST00000841130;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000382;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000382;transcript_name=HG00140_ch_T0000382;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000382:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5930266	5930376	.	+	.	source_transcript=ENST00000841130.1;source_transcript_name=ENST00000841130;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000382;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000382;transcript_name=HG00140_ch_T0000382;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000382:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5930377	5936991	.	+	.	source_transcript=ENST00000841130.1;source_transcript_name=ENST00000841130;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000382;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000382;transcript_name=HG00140_ch_T0000382;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000382:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5936992	5937607	.	+	.	source_transcript=ENST00000841130.1;source_transcript_name=ENST00000841130;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000382;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000382;transcript_name=HG00140_ch_T0000382;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000382:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	5928986	5938330	1000	+	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000383;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_G0000091;transcript_name=HG00140_ch_T0000383;gene_name=ENSG00000309435;ID=HG00140_ch_T0000383;Name=ENSG00000309435
HG00140_chrY	CAT	exon	5928986	5929453	.	+	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000383;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000383;transcript_name=HG00140_ch_T0000383;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000383:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5929454	5930059	.	+	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000383;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000383;transcript_name=HG00140_ch_T0000383;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000383:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5930060	5930137	.	+	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000383;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000383;transcript_name=HG00140_ch_T0000383;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000383:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5930138	5930265	.	+	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000383;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000383;transcript_name=HG00140_ch_T0000383;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000383:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5930266	5930376	.	+	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000383;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000383;transcript_name=HG00140_ch_T0000383;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000383:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5930377	5930725	.	+	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000383;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000383;transcript_name=HG00140_ch_T0000383;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000383:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5930726	5930848	.	+	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000383;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000383;transcript_name=HG00140_ch_T0000383;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000383:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5930849	5931501	.	+	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000383;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000383;transcript_name=HG00140_ch_T0000383;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000383:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5931502	5931515	.	+	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000383;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000383;transcript_name=HG00140_ch_T0000383;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000383:4;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5931516	5932937	.	+	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000383;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000383;transcript_name=HG00140_ch_T0000383;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000383:4;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5932938	5933033	.	+	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000383;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000383;transcript_name=HG00140_ch_T0000383;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000383:5;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5933034	5936991	.	+	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000383;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000383;transcript_name=HG00140_ch_T0000383;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000383:5;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5936992	5938330	.	+	.	source_transcript=ENST00000841128.1;source_transcript_name=ENST00000841128;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000383;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000383;transcript_name=HG00140_ch_T0000383;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000383:6;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	5928988	5932054	1000	+	.	source_transcript=ENST00000841137.1;source_transcript_name=ENST00000841137;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841137.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000384;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_G0000091;transcript_name=HG00140_ch_T0000384;gene_name=ENSG00000309435;ID=HG00140_ch_T0000384;Name=ENSG00000309435
HG00140_chrY	CAT	exon	5928988	5929063	.	+	.	source_transcript=ENST00000841137.1;source_transcript_name=ENST00000841137;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841137.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000384;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000384;transcript_name=HG00140_ch_T0000384;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000384:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5929064	5929486	.	+	.	source_transcript=ENST00000841137.1;source_transcript_name=ENST00000841137;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841137.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000384;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000384;transcript_name=HG00140_ch_T0000384;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000384:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5929487	5929729	.	+	.	source_transcript=ENST00000841137.1;source_transcript_name=ENST00000841137;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841137.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000384;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000384;transcript_name=HG00140_ch_T0000384;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000384:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5929730	5930077	.	+	.	source_transcript=ENST00000841137.1;source_transcript_name=ENST00000841137;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841137.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000384;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000384;transcript_name=HG00140_ch_T0000384;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000384:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5930078	5930137	.	+	.	source_transcript=ENST00000841137.1;source_transcript_name=ENST00000841137;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841137.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000384;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000384;transcript_name=HG00140_ch_T0000384;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000384:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5930138	5930265	.	+	.	source_transcript=ENST00000841137.1;source_transcript_name=ENST00000841137;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841137.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000384;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000384;transcript_name=HG00140_ch_T0000384;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000384:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5930266	5930376	.	+	.	source_transcript=ENST00000841137.1;source_transcript_name=ENST00000841137;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841137.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000384;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000384;transcript_name=HG00140_ch_T0000384;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000384:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5930377	5931501	.	+	.	source_transcript=ENST00000841137.1;source_transcript_name=ENST00000841137;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841137.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000384;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000384;transcript_name=HG00140_ch_T0000384;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000384:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5931502	5932054	.	+	.	source_transcript=ENST00000841137.1;source_transcript_name=ENST00000841137;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841137.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000384;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000384;transcript_name=HG00140_ch_T0000384;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000384:4;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	5928994	5937607	1000	+	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000385;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_G0000091;transcript_name=HG00140_ch_T0000385;gene_name=ENSG00000309435;ID=HG00140_ch_T0000385;Name=ENSG00000309435
HG00140_chrY	CAT	exon	5928994	5929063	.	+	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000385;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000385;transcript_name=HG00140_ch_T0000385;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000385:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5929064	5929486	.	+	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000385;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000385;transcript_name=HG00140_ch_T0000385;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000385:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5929487	5929729	.	+	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000385;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000385;transcript_name=HG00140_ch_T0000385;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000385:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5929730	5930077	.	+	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000385;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000385;transcript_name=HG00140_ch_T0000385;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000385:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5930078	5930137	.	+	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000385;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000385;transcript_name=HG00140_ch_T0000385;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000385:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5930138	5930265	.	+	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000385;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000385;transcript_name=HG00140_ch_T0000385;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000385:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5930266	5930376	.	+	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000385;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000385;transcript_name=HG00140_ch_T0000385;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000385:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5930377	5930725	.	+	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000385;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000385;transcript_name=HG00140_ch_T0000385;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000385:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5930726	5930848	.	+	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000385;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000385;transcript_name=HG00140_ch_T0000385;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000385:4;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5930849	5931501	.	+	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000385;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000385;transcript_name=HG00140_ch_T0000385;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000385:4;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5931502	5931515	.	+	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000385;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000385;transcript_name=HG00140_ch_T0000385;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000385:5;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5931516	5932918	.	+	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000385;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000385;transcript_name=HG00140_ch_T0000385;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000385:5;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5932919	5933172	.	+	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000385;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000385;transcript_name=HG00140_ch_T0000385;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000385:6;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5933173	5936991	.	+	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000385;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000385;transcript_name=HG00140_ch_T0000385;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000385:6;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5936992	5937607	.	+	.	source_transcript=ENST00000841132.1;source_transcript_name=ENST00000841132;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000385;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000385;transcript_name=HG00140_ch_T0000385;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000385:7;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	5929003	5932053	1000	+	.	source_transcript=ENST00000841138.1;source_transcript_name=ENST00000841138;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841138.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000386;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_G0000091;transcript_name=HG00140_ch_T0000386;gene_name=ENSG00000309435;ID=HG00140_ch_T0000386;Name=ENSG00000309435
HG00140_chrY	CAT	exon	5929003	5929063	.	+	.	source_transcript=ENST00000841138.1;source_transcript_name=ENST00000841138;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841138.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000386;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000386;transcript_name=HG00140_ch_T0000386;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000386:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5929064	5929486	.	+	.	source_transcript=ENST00000841138.1;source_transcript_name=ENST00000841138;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841138.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000386;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000386;transcript_name=HG00140_ch_T0000386;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000386:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5929487	5929729	.	+	.	source_transcript=ENST00000841138.1;source_transcript_name=ENST00000841138;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841138.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000386;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000386;transcript_name=HG00140_ch_T0000386;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000386:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5929730	5930265	.	+	.	source_transcript=ENST00000841138.1;source_transcript_name=ENST00000841138;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841138.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000386;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000386;transcript_name=HG00140_ch_T0000386;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000386:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5930266	5930376	.	+	.	source_transcript=ENST00000841138.1;source_transcript_name=ENST00000841138;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841138.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000386;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000386;transcript_name=HG00140_ch_T0000386;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000386:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5930377	5931501	.	+	.	source_transcript=ENST00000841138.1;source_transcript_name=ENST00000841138;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841138.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000386;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000386;transcript_name=HG00140_ch_T0000386;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000386:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5931502	5932053	.	+	.	source_transcript=ENST00000841138.1;source_transcript_name=ENST00000841138;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841138.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000386;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000386;transcript_name=HG00140_ch_T0000386;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000386:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	5929005	5937607	1000	+	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000387;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_G0000091;transcript_name=HG00140_ch_T0000387;gene_name=ENSG00000309435;ID=HG00140_ch_T0000387;Name=ENSG00000309435
HG00140_chrY	CAT	exon	5929005	5929063	.	+	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000387;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000387;transcript_name=HG00140_ch_T0000387;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000387:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5929064	5929486	.	+	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000387;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000387;transcript_name=HG00140_ch_T0000387;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000387:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5929487	5929729	.	+	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000387;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000387;transcript_name=HG00140_ch_T0000387;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000387:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5929730	5930265	.	+	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000387;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000387;transcript_name=HG00140_ch_T0000387;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000387:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5930266	5930376	.	+	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000387;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000387;transcript_name=HG00140_ch_T0000387;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000387:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5930377	5930725	.	+	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000387;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000387;transcript_name=HG00140_ch_T0000387;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000387:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5930726	5930848	.	+	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000387;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000387;transcript_name=HG00140_ch_T0000387;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000387:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5930849	5931501	.	+	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000387;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000387;transcript_name=HG00140_ch_T0000387;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000387:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5931502	5931515	.	+	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000387;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000387;transcript_name=HG00140_ch_T0000387;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000387:4;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5931516	5932937	.	+	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000387;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000387;transcript_name=HG00140_ch_T0000387;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000387:4;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5932938	5933033	.	+	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000387;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000387;transcript_name=HG00140_ch_T0000387;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000387:5;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5933034	5936991	.	+	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000387;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000387;transcript_name=HG00140_ch_T0000387;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000387:5;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5936992	5937607	.	+	.	source_transcript=ENST00000841133.1;source_transcript_name=ENST00000841133;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000387;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000387;transcript_name=HG00140_ch_T0000387;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000387:6;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	5929005	5937620	1000	+	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000388;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_G0000091;transcript_name=HG00140_ch_T0000388;gene_name=ENSG00000309435;ID=HG00140_ch_T0000388;Name=ENSG00000309435
HG00140_chrY	CAT	exon	5929005	5929063	.	+	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000388;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000388;transcript_name=HG00140_ch_T0000388;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000388:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5929064	5929486	.	+	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000388;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000388;transcript_name=HG00140_ch_T0000388;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000388:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5929487	5929729	.	+	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000388;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000388;transcript_name=HG00140_ch_T0000388;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000388:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5929730	5930016	.	+	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000388;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000388;transcript_name=HG00140_ch_T0000388;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000388:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5930017	5930137	.	+	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000388;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000388;transcript_name=HG00140_ch_T0000388;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000388:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5930138	5930265	.	+	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000388;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000388;transcript_name=HG00140_ch_T0000388;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000388:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5930266	5930376	.	+	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000388;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000388;transcript_name=HG00140_ch_T0000388;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000388:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5930377	5930725	.	+	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000388;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000388;transcript_name=HG00140_ch_T0000388;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000388:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5930726	5930848	.	+	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000388;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000388;transcript_name=HG00140_ch_T0000388;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000388:4;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5930849	5931501	.	+	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000388;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000388;transcript_name=HG00140_ch_T0000388;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000388:4;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5931502	5931515	.	+	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000388;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000388;transcript_name=HG00140_ch_T0000388;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000388:5;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5931516	5932937	.	+	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000388;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000388;transcript_name=HG00140_ch_T0000388;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000388:5;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5932938	5933033	.	+	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000388;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000388;transcript_name=HG00140_ch_T0000388;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000388:6;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5933034	5936991	.	+	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000388;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000388;transcript_name=HG00140_ch_T0000388;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000388:6;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5936992	5937620	.	+	.	source_transcript=ENST00000841131.1;source_transcript_name=ENST00000841131;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841131.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000388;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000388;transcript_name=HG00140_ch_T0000388;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000388:7;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	5929012	5933489	1000	+	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000389;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_G0000091;transcript_name=HG00140_ch_T0000389;gene_name=ENSG00000309435;ID=HG00140_ch_T0000389;Name=ENSG00000309435
HG00140_chrY	CAT	exon	5929012	5929063	.	+	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000389;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000389;transcript_name=HG00140_ch_T0000389;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000389:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5929064	5929486	.	+	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000389;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000389;transcript_name=HG00140_ch_T0000389;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000389:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5929487	5929729	.	+	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000389;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000389;transcript_name=HG00140_ch_T0000389;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000389:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5929730	5930077	.	+	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000389;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000389;transcript_name=HG00140_ch_T0000389;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000389:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5930078	5930137	.	+	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000389;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000389;transcript_name=HG00140_ch_T0000389;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000389:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5930138	5930265	.	+	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000389;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000389;transcript_name=HG00140_ch_T0000389;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000389:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5930266	5930376	.	+	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000389;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000389;transcript_name=HG00140_ch_T0000389;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000389:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5930377	5930725	.	+	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000389;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000389;transcript_name=HG00140_ch_T0000389;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000389:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5930726	5930848	.	+	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000389;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000389;transcript_name=HG00140_ch_T0000389;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000389:4;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5930849	5931501	.	+	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000389;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000389;transcript_name=HG00140_ch_T0000389;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000389:4;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5931502	5931515	.	+	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000389;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000389;transcript_name=HG00140_ch_T0000389;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000389:5;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5931516	5932937	.	+	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000389;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000389;transcript_name=HG00140_ch_T0000389;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000389:5;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5932938	5933489	.	+	.	source_transcript=ENST00000841136.1;source_transcript_name=ENST00000841136;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000389;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000389;transcript_name=HG00140_ch_T0000389;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000389:6;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	5929026	5937607	1000	+	.	source_transcript=ENST00000841134.1;source_transcript_name=ENST00000841134;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841134.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000390;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_G0000091;transcript_name=HG00140_ch_T0000390;gene_name=ENSG00000309435;ID=HG00140_ch_T0000390;Name=ENSG00000309435
HG00140_chrY	CAT	exon	5929026	5929453	.	+	.	source_transcript=ENST00000841134.1;source_transcript_name=ENST00000841134;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841134.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000390;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000390;transcript_name=HG00140_ch_T0000390;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000390:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5929454	5930059	.	+	.	source_transcript=ENST00000841134.1;source_transcript_name=ENST00000841134;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841134.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000390;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000390;transcript_name=HG00140_ch_T0000390;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000390:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5930060	5930137	.	+	.	source_transcript=ENST00000841134.1;source_transcript_name=ENST00000841134;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841134.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000390;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000390;transcript_name=HG00140_ch_T0000390;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000390:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5930138	5930265	.	+	.	source_transcript=ENST00000841134.1;source_transcript_name=ENST00000841134;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841134.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000390;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000390;transcript_name=HG00140_ch_T0000390;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000390:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5930266	5930376	.	+	.	source_transcript=ENST00000841134.1;source_transcript_name=ENST00000841134;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841134.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000390;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000390;transcript_name=HG00140_ch_T0000390;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000390:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5930377	5936991	.	+	.	source_transcript=ENST00000841134.1;source_transcript_name=ENST00000841134;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841134.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000390;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000390;transcript_name=HG00140_ch_T0000390;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000390:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5936992	5937607	.	+	.	source_transcript=ENST00000841134.1;source_transcript_name=ENST00000841134;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841134.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000390;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000390;transcript_name=HG00140_ch_T0000390;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000390:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	5929607	5937607	1000	+	.	source_transcript=ENST00000841135.1;source_transcript_name=ENST00000841135;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841135.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000391;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_G0000091;transcript_name=HG00140_ch_T0000391;gene_name=ENSG00000309435;ID=HG00140_ch_T0000391;Name=ENSG00000309435
HG00140_chrY	CAT	exon	5929607	5929729	.	+	.	source_transcript=ENST00000841135.1;source_transcript_name=ENST00000841135;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000391;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000391;transcript_name=HG00140_ch_T0000391;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000391:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5929730	5930077	.	+	.	source_transcript=ENST00000841135.1;source_transcript_name=ENST00000841135;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000391;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000391;transcript_name=HG00140_ch_T0000391;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000391:0;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5930078	5930137	.	+	.	source_transcript=ENST00000841135.1;source_transcript_name=ENST00000841135;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000391;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000391;transcript_name=HG00140_ch_T0000391;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000391:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5930138	5930265	.	+	.	source_transcript=ENST00000841135.1;source_transcript_name=ENST00000841135;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000391;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000391;transcript_name=HG00140_ch_T0000391;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000391:1;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5930266	5930376	.	+	.	source_transcript=ENST00000841135.1;source_transcript_name=ENST00000841135;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000391;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000391;transcript_name=HG00140_ch_T0000391;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000391:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5930377	5936991	.	+	.	source_transcript=ENST00000841135.1;source_transcript_name=ENST00000841135;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000391;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000391;transcript_name=HG00140_ch_T0000391;gene_name=ENSG00000309435;ID=intron:HG00140_ch_T0000391:2;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5936992	5937607	.	+	.	source_transcript=ENST00000841135.1;source_transcript_name=ENST00000841135;source_gene=ENSG00000309435.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309435.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000841135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000841135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309435;transcript_id=HG00140_ch_T0000391;gene_id=HG00140_ch_G0000091;Parent=HG00140_ch_T0000391;transcript_name=HG00140_ch_T0000391;gene_name=ENSG00000309435;ID=exon:HG00140_ch_T0000391:3;Name=ENSG00000309435;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	5935971	5936457	.	-	.	source_gene_common_name=ENSG00000275352;source_gene=ENSG00000275352.1;gene_id=HG00140_ch_G0000092;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000275352;gene_sources=liftoff;ID=HG00140_ch_G0000092;Name=ENSG00000275352
HG00140_chrY	CAT	transcript	5935971	5936457	1000	-	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;transcript_id=HG00140_ch_T0000392;gene_id=HG00140_ch_G0000092;Parent=HG00140_ch_G0000092;transcript_name=HG00140_ch_T0000392;gene_name=ENSG00000275352;ID=HG00140_ch_T0000392;Name=ENSG00000275352
HG00140_chrY	CAT	exon	5935971	5936053	.	-	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;transcript_id=HG00140_ch_T0000392;gene_id=HG00140_ch_G0000092;Parent=HG00140_ch_T0000392;transcript_name=HG00140_ch_T0000392;gene_name=ENSG00000275352;ID=exon:HG00140_ch_T0000392:0;Name=ENSG00000275352;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5936054	5936159	.	-	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;transcript_id=HG00140_ch_T0000392;gene_id=HG00140_ch_G0000092;Parent=HG00140_ch_T0000392;transcript_name=HG00140_ch_T0000392;gene_name=ENSG00000275352;ID=intron:HG00140_ch_T0000392:0;Name=ENSG00000275352;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5936160	5936304	.	-	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;transcript_id=HG00140_ch_T0000392;gene_id=HG00140_ch_G0000092;Parent=HG00140_ch_T0000392;transcript_name=HG00140_ch_T0000392;gene_name=ENSG00000275352;ID=exon:HG00140_ch_T0000392:1;Name=ENSG00000275352;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5936305	5936393	.	-	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;transcript_id=HG00140_ch_T0000392;gene_id=HG00140_ch_G0000092;Parent=HG00140_ch_T0000392;transcript_name=HG00140_ch_T0000392;gene_name=ENSG00000275352;ID=intron:HG00140_ch_T0000392:1;Name=ENSG00000275352;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5936394	5936457	.	-	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;transcript_id=HG00140_ch_T0000392;gene_id=HG00140_ch_G0000092;Parent=HG00140_ch_T0000392;transcript_name=HG00140_ch_T0000392;gene_name=ENSG00000275352;ID=exon:HG00140_ch_T0000392:2;Name=ENSG00000275352;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	5966325	5967442	.	-	.	source_gene_common_name=TSPY18P;source_gene=ENSG00000231874.3;gene_id=HG00140_ch_G0000093;gene_biotype=unprocessed_pseudogene;gene_name=TSPY18P;gene_sources=liftoff;ID=HG00140_ch_G0000093;Name=TSPY18P
HG00140_chrY	CAT	transcript	5966325	5967442	1000	-	.	source_transcript=ENST00000441642.1;source_transcript_name=TSPY18P-201;source_gene=ENSG00000231874.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231874.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000441642.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441642.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY18P;transcript_id=HG00140_ch_T0000393;gene_id=HG00140_ch_G0000093;Parent=HG00140_ch_G0000093;transcript_name=HG00140_ch_T0000393;gene_name=TSPY18P;ID=HG00140_ch_T0000393;Name=TSPY18P
HG00140_chrY	CAT	exon	5966325	5966357	.	-	.	source_transcript=ENST00000441642.1;source_transcript_name=TSPY18P-201;source_gene=ENSG00000231874.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231874.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000441642.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441642.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY18P;transcript_id=HG00140_ch_T0000393;gene_id=HG00140_ch_G0000093;Parent=HG00140_ch_T0000393;transcript_name=HG00140_ch_T0000393;gene_name=TSPY18P;ID=exon:HG00140_ch_T0000393:0;Name=TSPY18P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5966358	5966966	.	-	.	source_transcript=ENST00000441642.1;source_transcript_name=TSPY18P-201;source_gene=ENSG00000231874.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231874.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000441642.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441642.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY18P;transcript_id=HG00140_ch_T0000393;gene_id=HG00140_ch_G0000093;Parent=HG00140_ch_T0000393;transcript_name=HG00140_ch_T0000393;gene_name=TSPY18P;ID=intron:HG00140_ch_T0000393:0;Name=TSPY18P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	5966967	5967442	.	-	.	source_transcript=ENST00000441642.1;source_transcript_name=TSPY18P-201;source_gene=ENSG00000231874.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231874.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000441642.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441642.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY18P;transcript_id=HG00140_ch_T0000393;gene_id=HG00140_ch_G0000093;Parent=HG00140_ch_T0000393;transcript_name=HG00140_ch_T0000393;gene_name=TSPY18P;ID=exon:HG00140_ch_T0000393:1;Name=TSPY18P;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	5968404	5968644	.	+	.	source_gene_common_name=ENSG00000274445;source_gene=ENSG00000274445.1;gene_id=HG00140_ch_G0000094;gene_biotype=processed_pseudogene;gene_name=ENSG00000274445;gene_sources=liftoff;ID=HG00140_ch_G0000094;Name=ENSG00000274445
HG00140_chrY	CAT	transcript	5968404	5968644	1000	+	.	source_transcript=ENST00000612764.1;source_transcript_name=ENST00000612764;source_gene=ENSG00000274445.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274445.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000612764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000612764.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274445;transcript_id=HG00140_ch_T0000394;gene_id=HG00140_ch_G0000094;Parent=HG00140_ch_G0000094;transcript_name=HG00140_ch_T0000394;gene_name=ENSG00000274445;ID=HG00140_ch_T0000394;Name=ENSG00000274445
HG00140_chrY	CAT	exon	5968404	5968644	.	+	.	source_transcript=ENST00000612764.1;source_transcript_name=ENST00000612764;source_gene=ENSG00000274445.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274445.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000612764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000612764.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274445;transcript_id=HG00140_ch_T0000394;gene_id=HG00140_ch_G0000094;Parent=HG00140_ch_T0000394;transcript_name=HG00140_ch_T0000394;gene_name=ENSG00000274445;ID=exon:HG00140_ch_T0000394:0;Name=ENSG00000274445;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	5978559	6006029	.	+	.	source_gene_common_name=ENSG00000310196;source_gene=ENSG00000310196.1;alternative_source_transcripts=ENST00000848078.1;gene_id=HG00140_ch_G0000095;gene_biotype=lncRNA;gene_name=ENSG00000310196;gene_sources=liftoff;ID=HG00140_ch_G0000095;Name=ENSG00000310196
HG00140_chrY	CAT	transcript	5978559	6006029	1000	+	.	source_transcript=ENST00000848078.1;source_transcript_name=ENST00000848078;source_gene=ENSG00000310196.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310196.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848078.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310196;alternative_source_transcripts=ENST00000848078.1;transcript_id=HG00140_ch_T0000395;gene_id=HG00140_ch_G0000095;Parent=HG00140_ch_G0000095;transcript_name=HG00140_ch_T0000395;gene_name=ENSG00000310196;ID=HG00140_ch_T0000395;Name=ENSG00000310196
HG00140_chrY	CAT	exon	5978559	5979037	.	+	.	source_transcript=ENST00000848078.1;source_transcript_name=ENST00000848078;source_gene=ENSG00000310196.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310196.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310196;alternative_source_transcripts=ENST00000848078.1;transcript_id=HG00140_ch_T0000395;gene_id=HG00140_ch_G0000095;Parent=HG00140_ch_T0000395;transcript_name=HG00140_ch_T0000395;gene_name=ENSG00000310196;ID=exon:HG00140_ch_T0000395:0;Name=ENSG00000310196;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5979038	6001110	.	+	.	source_transcript=ENST00000848078.1;source_transcript_name=ENST00000848078;source_gene=ENSG00000310196.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310196.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310196;alternative_source_transcripts=ENST00000848078.1;transcript_id=HG00140_ch_T0000395;gene_id=HG00140_ch_G0000095;Parent=HG00140_ch_T0000395;transcript_name=HG00140_ch_T0000395;gene_name=ENSG00000310196;ID=intron:HG00140_ch_T0000395:0;Name=ENSG00000310196;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6001111	6001260	.	+	.	source_transcript=ENST00000848078.1;source_transcript_name=ENST00000848078;source_gene=ENSG00000310196.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310196.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310196;alternative_source_transcripts=ENST00000848078.1;transcript_id=HG00140_ch_T0000395;gene_id=HG00140_ch_G0000095;Parent=HG00140_ch_T0000395;transcript_name=HG00140_ch_T0000395;gene_name=ENSG00000310196;ID=exon:HG00140_ch_T0000395:1;Name=ENSG00000310196;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6001261	6004896	.	+	.	source_transcript=ENST00000848078.1;source_transcript_name=ENST00000848078;source_gene=ENSG00000310196.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310196.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310196;alternative_source_transcripts=ENST00000848078.1;transcript_id=HG00140_ch_T0000395;gene_id=HG00140_ch_G0000095;Parent=HG00140_ch_T0000395;transcript_name=HG00140_ch_T0000395;gene_name=ENSG00000310196;ID=intron:HG00140_ch_T0000395:1;Name=ENSG00000310196;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6004897	6004978	.	+	.	source_transcript=ENST00000848078.1;source_transcript_name=ENST00000848078;source_gene=ENSG00000310196.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310196.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310196;alternative_source_transcripts=ENST00000848078.1;transcript_id=HG00140_ch_T0000395;gene_id=HG00140_ch_G0000095;Parent=HG00140_ch_T0000395;transcript_name=HG00140_ch_T0000395;gene_name=ENSG00000310196;ID=exon:HG00140_ch_T0000395:2;Name=ENSG00000310196;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6004979	6005387	.	+	.	source_transcript=ENST00000848078.1;source_transcript_name=ENST00000848078;source_gene=ENSG00000310196.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310196.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310196;alternative_source_transcripts=ENST00000848078.1;transcript_id=HG00140_ch_T0000395;gene_id=HG00140_ch_G0000095;Parent=HG00140_ch_T0000395;transcript_name=HG00140_ch_T0000395;gene_name=ENSG00000310196;ID=intron:HG00140_ch_T0000395:2;Name=ENSG00000310196;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6005388	6006029	.	+	.	source_transcript=ENST00000848078.1;source_transcript_name=ENST00000848078;source_gene=ENSG00000310196.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310196.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310196;alternative_source_transcripts=ENST00000848078.1;transcript_id=HG00140_ch_T0000395;gene_id=HG00140_ch_G0000095;Parent=HG00140_ch_T0000395;transcript_name=HG00140_ch_T0000395;gene_name=ENSG00000310196;ID=exon:HG00140_ch_T0000395:3;Name=ENSG00000310196;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	5990411	6005689	.	+	.	source_gene_common_name=RBMY2NP;source_gene=ENSG00000229208.1;gene_id=HG00140_ch_G0000096;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY2NP;gene_sources=liftoff;ID=HG00140_ch_G0000096;Name=RBMY2NP
HG00140_chrY	CAT	transcript	5990411	6005689	1000	+	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=HG00140_ch_T0000396;gene_id=HG00140_ch_G0000096;Parent=HG00140_ch_G0000096;transcript_name=HG00140_ch_T0000396;gene_name=RBMY2NP;ID=HG00140_ch_T0000396;Name=RBMY2NP
HG00140_chrY	CAT	exon	5990411	5990588	.	+	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=HG00140_ch_T0000396;gene_id=HG00140_ch_G0000096;Parent=HG00140_ch_T0000396;transcript_name=HG00140_ch_T0000396;gene_name=RBMY2NP;ID=exon:HG00140_ch_T0000396:0;Name=RBMY2NP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	5990589	6001110	.	+	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=HG00140_ch_T0000396;gene_id=HG00140_ch_G0000096;Parent=HG00140_ch_T0000396;transcript_name=HG00140_ch_T0000396;gene_name=RBMY2NP;ID=intron:HG00140_ch_T0000396:0;Name=RBMY2NP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6001111	6001260	.	+	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=HG00140_ch_T0000396;gene_id=HG00140_ch_G0000096;Parent=HG00140_ch_T0000396;transcript_name=HG00140_ch_T0000396;gene_name=RBMY2NP;ID=exon:HG00140_ch_T0000396:1;Name=RBMY2NP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6001261	6003260	.	+	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=HG00140_ch_T0000396;gene_id=HG00140_ch_G0000096;Parent=HG00140_ch_T0000396;transcript_name=HG00140_ch_T0000396;gene_name=RBMY2NP;ID=intron:HG00140_ch_T0000396:1;Name=RBMY2NP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6003261	6003360	.	+	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=HG00140_ch_T0000396;gene_id=HG00140_ch_G0000096;Parent=HG00140_ch_T0000396;transcript_name=HG00140_ch_T0000396;gene_name=RBMY2NP;ID=exon:HG00140_ch_T0000396:2;Name=RBMY2NP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6003361	6004167	.	+	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=HG00140_ch_T0000396;gene_id=HG00140_ch_G0000096;Parent=HG00140_ch_T0000396;transcript_name=HG00140_ch_T0000396;gene_name=RBMY2NP;ID=intron:HG00140_ch_T0000396:2;Name=RBMY2NP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6004168	6004278	.	+	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=HG00140_ch_T0000396;gene_id=HG00140_ch_G0000096;Parent=HG00140_ch_T0000396;transcript_name=HG00140_ch_T0000396;gene_name=RBMY2NP;ID=exon:HG00140_ch_T0000396:3;Name=RBMY2NP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6004279	6004675	.	+	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=HG00140_ch_T0000396;gene_id=HG00140_ch_G0000096;Parent=HG00140_ch_T0000396;transcript_name=HG00140_ch_T0000396;gene_name=RBMY2NP;ID=intron:HG00140_ch_T0000396:3;Name=RBMY2NP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6004676	6004786	.	+	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=HG00140_ch_T0000396;gene_id=HG00140_ch_G0000096;Parent=HG00140_ch_T0000396;transcript_name=HG00140_ch_T0000396;gene_name=RBMY2NP;ID=exon:HG00140_ch_T0000396:4;Name=RBMY2NP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6004787	6004896	.	+	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=HG00140_ch_T0000396;gene_id=HG00140_ch_G0000096;Parent=HG00140_ch_T0000396;transcript_name=HG00140_ch_T0000396;gene_name=RBMY2NP;ID=intron:HG00140_ch_T0000396:4;Name=RBMY2NP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6004897	6004972	.	+	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=HG00140_ch_T0000396;gene_id=HG00140_ch_G0000096;Parent=HG00140_ch_T0000396;transcript_name=HG00140_ch_T0000396;gene_name=RBMY2NP;ID=exon:HG00140_ch_T0000396:5;Name=RBMY2NP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6004973	6005387	.	+	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=HG00140_ch_T0000396;gene_id=HG00140_ch_G0000096;Parent=HG00140_ch_T0000396;transcript_name=HG00140_ch_T0000396;gene_name=RBMY2NP;ID=intron:HG00140_ch_T0000396:5;Name=RBMY2NP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6005388	6005689	.	+	.	source_transcript=ENST00000434454.1;source_transcript_name=RBMY2NP-201;source_gene=ENSG00000229208.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000229208.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434454.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2NP;transcript_id=HG00140_ch_T0000396;gene_id=HG00140_ch_G0000096;Parent=HG00140_ch_T0000396;transcript_name=HG00140_ch_T0000396;gene_name=RBMY2NP;ID=exon:HG00140_ch_T0000396:6;Name=RBMY2NP;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6003212	6052721	.	-	.	source_gene_common_name=TTTY22;source_gene=ENSG00000224075.2;gene_id=HG00140_ch_G0000097;gene_biotype=lncRNA;gene_name=TTTY22;gene_sources=liftoff;ID=HG00140_ch_G0000097;Name=TTTY22
HG00140_chrY	CAT	transcript	6003212	6052721	1000	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00140_ch_T0000397;gene_id=HG00140_ch_G0000097;Parent=HG00140_ch_G0000097;transcript_name=HG00140_ch_T0000397;gene_name=TTTY22;ID=HG00140_ch_T0000397;Name=TTTY22
HG00140_chrY	CAT	exon	6003212	6003350	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00140_ch_T0000397;gene_id=HG00140_ch_G0000097;Parent=HG00140_ch_T0000397;transcript_name=HG00140_ch_T0000397;gene_name=TTTY22;ID=exon:HG00140_ch_T0000397:0;Name=TTTY22;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6003351	6005500	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00140_ch_T0000397;gene_id=HG00140_ch_G0000097;Parent=HG00140_ch_T0000397;transcript_name=HG00140_ch_T0000397;gene_name=TTTY22;ID=intron:HG00140_ch_T0000397:0;Name=TTTY22;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6005501	6005673	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00140_ch_T0000397;gene_id=HG00140_ch_G0000097;Parent=HG00140_ch_T0000397;transcript_name=HG00140_ch_T0000397;gene_name=TTTY22;ID=exon:HG00140_ch_T0000397:1;Name=TTTY22;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6005674	6009944	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00140_ch_T0000397;gene_id=HG00140_ch_G0000097;Parent=HG00140_ch_T0000397;transcript_name=HG00140_ch_T0000397;gene_name=TTTY22;ID=intron:HG00140_ch_T0000397:1;Name=TTTY22;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6009945	6010113	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00140_ch_T0000397;gene_id=HG00140_ch_G0000097;Parent=HG00140_ch_T0000397;transcript_name=HG00140_ch_T0000397;gene_name=TTTY22;ID=exon:HG00140_ch_T0000397:2;Name=TTTY22;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6010114	6023698	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00140_ch_T0000397;gene_id=HG00140_ch_G0000097;Parent=HG00140_ch_T0000397;transcript_name=HG00140_ch_T0000397;gene_name=TTTY22;ID=intron:HG00140_ch_T0000397:2;Name=TTTY22;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6023699	6023813	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00140_ch_T0000397;gene_id=HG00140_ch_G0000097;Parent=HG00140_ch_T0000397;transcript_name=HG00140_ch_T0000397;gene_name=TTTY22;ID=exon:HG00140_ch_T0000397:3;Name=TTTY22;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6023814	6026989	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00140_ch_T0000397;gene_id=HG00140_ch_G0000097;Parent=HG00140_ch_T0000397;transcript_name=HG00140_ch_T0000397;gene_name=TTTY22;ID=intron:HG00140_ch_T0000397:3;Name=TTTY22;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6026990	6027028	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00140_ch_T0000397;gene_id=HG00140_ch_G0000097;Parent=HG00140_ch_T0000397;transcript_name=HG00140_ch_T0000397;gene_name=TTTY22;ID=exon:HG00140_ch_T0000397:4;Name=TTTY22;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6027029	6027713	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00140_ch_T0000397;gene_id=HG00140_ch_G0000097;Parent=HG00140_ch_T0000397;transcript_name=HG00140_ch_T0000397;gene_name=TTTY22;ID=intron:HG00140_ch_T0000397:4;Name=TTTY22;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6027714	6027788	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00140_ch_T0000397;gene_id=HG00140_ch_G0000097;Parent=HG00140_ch_T0000397;transcript_name=HG00140_ch_T0000397;gene_name=TTTY22;ID=exon:HG00140_ch_T0000397:5;Name=TTTY22;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6027789	6032211	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00140_ch_T0000397;gene_id=HG00140_ch_G0000097;Parent=HG00140_ch_T0000397;transcript_name=HG00140_ch_T0000397;gene_name=TTTY22;ID=intron:HG00140_ch_T0000397:5;Name=TTTY22;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6032212	6032323	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00140_ch_T0000397;gene_id=HG00140_ch_G0000097;Parent=HG00140_ch_T0000397;transcript_name=HG00140_ch_T0000397;gene_name=TTTY22;ID=exon:HG00140_ch_T0000397:6;Name=TTTY22;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6032324	6038881	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00140_ch_T0000397;gene_id=HG00140_ch_G0000097;Parent=HG00140_ch_T0000397;transcript_name=HG00140_ch_T0000397;gene_name=TTTY22;ID=intron:HG00140_ch_T0000397:6;Name=TTTY22;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6038882	6039134	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00140_ch_T0000397;gene_id=HG00140_ch_G0000097;Parent=HG00140_ch_T0000397;transcript_name=HG00140_ch_T0000397;gene_name=TTTY22;ID=exon:HG00140_ch_T0000397:7;Name=TTTY22;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6039135	6041675	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00140_ch_T0000397;gene_id=HG00140_ch_G0000097;Parent=HG00140_ch_T0000397;transcript_name=HG00140_ch_T0000397;gene_name=TTTY22;ID=intron:HG00140_ch_T0000397:7;Name=TTTY22;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6041676	6041748	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00140_ch_T0000397;gene_id=HG00140_ch_G0000097;Parent=HG00140_ch_T0000397;transcript_name=HG00140_ch_T0000397;gene_name=TTTY22;ID=exon:HG00140_ch_T0000397:8;Name=TTTY22;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6041749	6042124	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00140_ch_T0000397;gene_id=HG00140_ch_G0000097;Parent=HG00140_ch_T0000397;transcript_name=HG00140_ch_T0000397;gene_name=TTTY22;ID=intron:HG00140_ch_T0000397:8;Name=TTTY22;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6042125	6042205	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00140_ch_T0000397;gene_id=HG00140_ch_G0000097;Parent=HG00140_ch_T0000397;transcript_name=HG00140_ch_T0000397;gene_name=TTTY22;ID=exon:HG00140_ch_T0000397:9;Name=TTTY22;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6042206	6049641	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00140_ch_T0000397;gene_id=HG00140_ch_G0000097;Parent=HG00140_ch_T0000397;transcript_name=HG00140_ch_T0000397;gene_name=TTTY22;ID=intron:HG00140_ch_T0000397:9;Name=TTTY22;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6049642	6049797	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00140_ch_T0000397;gene_id=HG00140_ch_G0000097;Parent=HG00140_ch_T0000397;transcript_name=HG00140_ch_T0000397;gene_name=TTTY22;ID=exon:HG00140_ch_T0000397:10;Name=TTTY22;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6049798	6052515	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00140_ch_T0000397;gene_id=HG00140_ch_G0000097;Parent=HG00140_ch_T0000397;transcript_name=HG00140_ch_T0000397;gene_name=TTTY22;ID=intron:HG00140_ch_T0000397:10;Name=TTTY22;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6052516	6052721	.	-	.	source_transcript=ENST00000650665.1;source_transcript_name=TTTY22-202;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650665.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00140_ch_T0000397;gene_id=HG00140_ch_G0000097;Parent=HG00140_ch_T0000397;transcript_name=HG00140_ch_T0000397;gene_name=TTTY22;ID=exon:HG00140_ch_T0000397:11;Name=TTTY22;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6023854	6035938	1000	-	.	source_transcript=ENST00000445253.1;source_transcript_name=TTTY22-201;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000445253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445253.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00140_ch_T0000399;gene_id=HG00140_ch_G0000097;Parent=HG00140_ch_G0000097;transcript_name=HG00140_ch_T0000399;gene_name=TTTY22;ID=HG00140_ch_T0000399;Name=TTTY22
HG00140_chrY	CAT	exon	6023854	6023899	.	-	.	source_transcript=ENST00000445253.1;source_transcript_name=TTTY22-201;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000445253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00140_ch_T0000399;gene_id=HG00140_ch_G0000097;Parent=HG00140_ch_T0000399;transcript_name=HG00140_ch_T0000399;gene_name=TTTY22;ID=exon:HG00140_ch_T0000399:0;Name=TTTY22;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6023900	6026989	.	-	.	source_transcript=ENST00000445253.1;source_transcript_name=TTTY22-201;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000445253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00140_ch_T0000399;gene_id=HG00140_ch_G0000097;Parent=HG00140_ch_T0000399;transcript_name=HG00140_ch_T0000399;gene_name=TTTY22;ID=intron:HG00140_ch_T0000399:0;Name=TTTY22;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6026990	6027028	.	-	.	source_transcript=ENST00000445253.1;source_transcript_name=TTTY22-201;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000445253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00140_ch_T0000399;gene_id=HG00140_ch_G0000097;Parent=HG00140_ch_T0000399;transcript_name=HG00140_ch_T0000399;gene_name=TTTY22;ID=exon:HG00140_ch_T0000399:1;Name=TTTY22;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6027029	6027713	.	-	.	source_transcript=ENST00000445253.1;source_transcript_name=TTTY22-201;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000445253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00140_ch_T0000399;gene_id=HG00140_ch_G0000097;Parent=HG00140_ch_T0000399;transcript_name=HG00140_ch_T0000399;gene_name=TTTY22;ID=intron:HG00140_ch_T0000399:1;Name=TTTY22;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6027714	6027788	.	-	.	source_transcript=ENST00000445253.1;source_transcript_name=TTTY22-201;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000445253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00140_ch_T0000399;gene_id=HG00140_ch_G0000097;Parent=HG00140_ch_T0000399;transcript_name=HG00140_ch_T0000399;gene_name=TTTY22;ID=exon:HG00140_ch_T0000399:2;Name=TTTY22;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6027789	6032211	.	-	.	source_transcript=ENST00000445253.1;source_transcript_name=TTTY22-201;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000445253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00140_ch_T0000399;gene_id=HG00140_ch_G0000097;Parent=HG00140_ch_T0000399;transcript_name=HG00140_ch_T0000399;gene_name=TTTY22;ID=intron:HG00140_ch_T0000399:2;Name=TTTY22;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6032212	6032323	.	-	.	source_transcript=ENST00000445253.1;source_transcript_name=TTTY22-201;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000445253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00140_ch_T0000399;gene_id=HG00140_ch_G0000097;Parent=HG00140_ch_T0000399;transcript_name=HG00140_ch_T0000399;gene_name=TTTY22;ID=exon:HG00140_ch_T0000399:3;Name=TTTY22;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6032324	6035783	.	-	.	source_transcript=ENST00000445253.1;source_transcript_name=TTTY22-201;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000445253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00140_ch_T0000399;gene_id=HG00140_ch_G0000097;Parent=HG00140_ch_T0000399;transcript_name=HG00140_ch_T0000399;gene_name=TTTY22;ID=intron:HG00140_ch_T0000399:3;Name=TTTY22;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6035784	6035938	.	-	.	source_transcript=ENST00000445253.1;source_transcript_name=TTTY22-201;source_gene=ENSG00000224075.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224075.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000445253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445253.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;transcript_id=HG00140_ch_T0000399;gene_id=HG00140_ch_G0000097;Parent=HG00140_ch_T0000399;transcript_name=HG00140_ch_T0000399;gene_name=TTTY22;ID=exon:HG00140_ch_T0000399:4;Name=TTTY22;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6019594	6023784	.	-	.	source_gene_common_name=ENSG00000228379;source_gene=ENSG00000228379.1;gene_id=HG00140_ch_G0000098;gene_biotype=lncRNA;gene_name=ENSG00000228379;gene_sources=liftoff;ID=HG00140_ch_G0000098;Name=ENSG00000228379
HG00140_chrY	CAT	transcript	6019594	6023784	1000	-	.	source_transcript=ENST00000449963.1;source_transcript_name=ENST00000449963;source_gene=ENSG00000228379.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228379.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449963.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228379;transcript_id=HG00140_ch_T0000398;gene_id=HG00140_ch_G0000098;Parent=HG00140_ch_G0000098;transcript_name=HG00140_ch_T0000398;gene_name=ENSG00000228379;ID=HG00140_ch_T0000398;Name=ENSG00000228379
HG00140_chrY	CAT	exon	6019594	6019812	.	-	.	source_transcript=ENST00000449963.1;source_transcript_name=ENST00000449963;source_gene=ENSG00000228379.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228379.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228379;transcript_id=HG00140_ch_T0000398;gene_id=HG00140_ch_G0000098;Parent=HG00140_ch_T0000398;transcript_name=HG00140_ch_T0000398;gene_name=ENSG00000228379;ID=exon:HG00140_ch_T0000398:0;Name=ENSG00000228379;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6019813	6021054	.	-	.	source_transcript=ENST00000449963.1;source_transcript_name=ENST00000449963;source_gene=ENSG00000228379.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228379.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228379;transcript_id=HG00140_ch_T0000398;gene_id=HG00140_ch_G0000098;Parent=HG00140_ch_T0000398;transcript_name=HG00140_ch_T0000398;gene_name=ENSG00000228379;ID=intron:HG00140_ch_T0000398:0;Name=ENSG00000228379;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6021055	6021197	.	-	.	source_transcript=ENST00000449963.1;source_transcript_name=ENST00000449963;source_gene=ENSG00000228379.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228379.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228379;transcript_id=HG00140_ch_T0000398;gene_id=HG00140_ch_G0000098;Parent=HG00140_ch_T0000398;transcript_name=HG00140_ch_T0000398;gene_name=ENSG00000228379;ID=exon:HG00140_ch_T0000398:1;Name=ENSG00000228379;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6021198	6023698	.	-	.	source_transcript=ENST00000449963.1;source_transcript_name=ENST00000449963;source_gene=ENSG00000228379.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228379.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228379;transcript_id=HG00140_ch_T0000398;gene_id=HG00140_ch_G0000098;Parent=HG00140_ch_T0000398;transcript_name=HG00140_ch_T0000398;gene_name=ENSG00000228379;ID=intron:HG00140_ch_T0000398:1;Name=ENSG00000228379;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6023699	6023784	.	-	.	source_transcript=ENST00000449963.1;source_transcript_name=ENST00000449963;source_gene=ENSG00000228379.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228379.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228379;transcript_id=HG00140_ch_T0000398;gene_id=HG00140_ch_G0000098;Parent=HG00140_ch_T0000398;transcript_name=HG00140_ch_T0000398;gene_name=ENSG00000228379;ID=exon:HG00140_ch_T0000398:2;Name=ENSG00000228379;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6062763	6083937	.	+	.	source_gene_common_name=TTTY1B;source_gene=ENSG00000129816.6;gene_id=HG00140_ch_G0000099;gene_biotype=lncRNA;gene_name=TTTY1B;gene_sources=liftoff;ID=HG00140_ch_G0000099;Name=TTTY1B
HG00140_chrY	CAT	transcript	6062763	6077937	1000	+	.	source_transcript=ENST00000735679.1;source_transcript_name=TTTY1B-203;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735679.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG00140_ch_T0000400;gene_id=HG00140_ch_G0000099;Parent=HG00140_ch_G0000099;transcript_name=HG00140_ch_T0000400;gene_name=TTTY1B;ID=HG00140_ch_T0000400;Name=TTTY1B
HG00140_chrY	CAT	exon	6062763	6063048	.	+	.	source_transcript=ENST00000735679.1;source_transcript_name=TTTY1B-203;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735679.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG00140_ch_T0000400;gene_id=HG00140_ch_G0000099;Parent=HG00140_ch_T0000400;transcript_name=HG00140_ch_T0000400;gene_name=TTTY1B;ID=exon:HG00140_ch_T0000400:0;Name=TTTY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6063049	6066472	.	+	.	source_transcript=ENST00000735679.1;source_transcript_name=TTTY1B-203;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735679.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG00140_ch_T0000400;gene_id=HG00140_ch_G0000099;Parent=HG00140_ch_T0000400;transcript_name=HG00140_ch_T0000400;gene_name=TTTY1B;ID=intron:HG00140_ch_T0000400:0;Name=TTTY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6066473	6066632	.	+	.	source_transcript=ENST00000735679.1;source_transcript_name=TTTY1B-203;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735679.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG00140_ch_T0000400;gene_id=HG00140_ch_G0000099;Parent=HG00140_ch_T0000400;transcript_name=HG00140_ch_T0000400;gene_name=TTTY1B;ID=exon:HG00140_ch_T0000400:1;Name=TTTY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6066633	6073495	.	+	.	source_transcript=ENST00000735679.1;source_transcript_name=TTTY1B-203;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735679.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG00140_ch_T0000400;gene_id=HG00140_ch_G0000099;Parent=HG00140_ch_T0000400;transcript_name=HG00140_ch_T0000400;gene_name=TTTY1B;ID=intron:HG00140_ch_T0000400:1;Name=TTTY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6073496	6073654	.	+	.	source_transcript=ENST00000735679.1;source_transcript_name=TTTY1B-203;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735679.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG00140_ch_T0000400;gene_id=HG00140_ch_G0000099;Parent=HG00140_ch_T0000400;transcript_name=HG00140_ch_T0000400;gene_name=TTTY1B;ID=exon:HG00140_ch_T0000400:2;Name=TTTY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6073655	6077779	.	+	.	source_transcript=ENST00000735679.1;source_transcript_name=TTTY1B-203;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735679.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG00140_ch_T0000400;gene_id=HG00140_ch_G0000099;Parent=HG00140_ch_T0000400;transcript_name=HG00140_ch_T0000400;gene_name=TTTY1B;ID=intron:HG00140_ch_T0000400:2;Name=TTTY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6077780	6077937	.	+	.	source_transcript=ENST00000735679.1;source_transcript_name=TTTY1B-203;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735679.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG00140_ch_T0000400;gene_id=HG00140_ch_G0000099;Parent=HG00140_ch_T0000400;transcript_name=HG00140_ch_T0000400;gene_name=TTTY1B;ID=exon:HG00140_ch_T0000400:3;Name=TTTY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6062791	6083937	1000	+	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG00140_ch_T0000401;gene_id=HG00140_ch_G0000099;Parent=HG00140_ch_G0000099;transcript_name=HG00140_ch_T0000401;gene_name=TTTY1B;ID=HG00140_ch_T0000401;Name=TTTY1B
HG00140_chrY	CAT	exon	6062791	6063048	.	+	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG00140_ch_T0000401;gene_id=HG00140_ch_G0000099;Parent=HG00140_ch_T0000401;transcript_name=HG00140_ch_T0000401;gene_name=TTTY1B;ID=exon:HG00140_ch_T0000401:0;Name=TTTY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6063049	6073495	.	+	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG00140_ch_T0000401;gene_id=HG00140_ch_G0000099;Parent=HG00140_ch_T0000401;transcript_name=HG00140_ch_T0000401;gene_name=TTTY1B;ID=intron:HG00140_ch_T0000401:0;Name=TTTY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6073496	6073654	.	+	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG00140_ch_T0000401;gene_id=HG00140_ch_G0000099;Parent=HG00140_ch_T0000401;transcript_name=HG00140_ch_T0000401;gene_name=TTTY1B;ID=exon:HG00140_ch_T0000401:1;Name=TTTY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6073655	6075225	.	+	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG00140_ch_T0000401;gene_id=HG00140_ch_G0000099;Parent=HG00140_ch_T0000401;transcript_name=HG00140_ch_T0000401;gene_name=TTTY1B;ID=intron:HG00140_ch_T0000401:1;Name=TTTY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6075226	6075312	.	+	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG00140_ch_T0000401;gene_id=HG00140_ch_G0000099;Parent=HG00140_ch_T0000401;transcript_name=HG00140_ch_T0000401;gene_name=TTTY1B;ID=exon:HG00140_ch_T0000401:2;Name=TTTY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6075313	6075960	.	+	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG00140_ch_T0000401;gene_id=HG00140_ch_G0000099;Parent=HG00140_ch_T0000401;transcript_name=HG00140_ch_T0000401;gene_name=TTTY1B;ID=intron:HG00140_ch_T0000401:2;Name=TTTY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6075961	6076098	.	+	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG00140_ch_T0000401;gene_id=HG00140_ch_G0000099;Parent=HG00140_ch_T0000401;transcript_name=HG00140_ch_T0000401;gene_name=TTTY1B;ID=exon:HG00140_ch_T0000401:3;Name=TTTY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6076099	6081205	.	+	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG00140_ch_T0000401;gene_id=HG00140_ch_G0000099;Parent=HG00140_ch_T0000401;transcript_name=HG00140_ch_T0000401;gene_name=TTTY1B;ID=intron:HG00140_ch_T0000401:3;Name=TTTY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6081206	6081349	.	+	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG00140_ch_T0000401;gene_id=HG00140_ch_G0000099;Parent=HG00140_ch_T0000401;transcript_name=HG00140_ch_T0000401;gene_name=TTTY1B;ID=exon:HG00140_ch_T0000401:4;Name=TTTY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6081350	6083679	.	+	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG00140_ch_T0000401;gene_id=HG00140_ch_G0000099;Parent=HG00140_ch_T0000401;transcript_name=HG00140_ch_T0000401;gene_name=TTTY1B;ID=intron:HG00140_ch_T0000401:4;Name=TTTY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6083680	6083937	.	+	.	source_transcript=ENST00000735677.1;source_transcript_name=TTTY1B-202;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735677.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735677.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG00140_ch_T0000401;gene_id=HG00140_ch_G0000099;Parent=HG00140_ch_T0000401;transcript_name=HG00140_ch_T0000401;gene_name=TTTY1B;ID=exon:HG00140_ch_T0000401:5;Name=TTTY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6062791	6077944	1000	+	.	source_transcript=ENST00000735680.1;source_transcript_name=TTTY1B-204;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735680.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG00140_ch_T0000402;gene_id=HG00140_ch_G0000099;Parent=HG00140_ch_G0000099;transcript_name=HG00140_ch_T0000402;gene_name=TTTY1B;ID=HG00140_ch_T0000402;Name=TTTY1B
HG00140_chrY	CAT	exon	6062791	6063048	.	+	.	source_transcript=ENST00000735680.1;source_transcript_name=TTTY1B-204;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG00140_ch_T0000402;gene_id=HG00140_ch_G0000099;Parent=HG00140_ch_T0000402;transcript_name=HG00140_ch_T0000402;gene_name=TTTY1B;ID=exon:HG00140_ch_T0000402:0;Name=TTTY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6063049	6073495	.	+	.	source_transcript=ENST00000735680.1;source_transcript_name=TTTY1B-204;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG00140_ch_T0000402;gene_id=HG00140_ch_G0000099;Parent=HG00140_ch_T0000402;transcript_name=HG00140_ch_T0000402;gene_name=TTTY1B;ID=intron:HG00140_ch_T0000402:0;Name=TTTY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6073496	6073654	.	+	.	source_transcript=ENST00000735680.1;source_transcript_name=TTTY1B-204;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG00140_ch_T0000402;gene_id=HG00140_ch_G0000099;Parent=HG00140_ch_T0000402;transcript_name=HG00140_ch_T0000402;gene_name=TTTY1B;ID=exon:HG00140_ch_T0000402:1;Name=TTTY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6073655	6077779	.	+	.	source_transcript=ENST00000735680.1;source_transcript_name=TTTY1B-204;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG00140_ch_T0000402;gene_id=HG00140_ch_G0000099;Parent=HG00140_ch_T0000402;transcript_name=HG00140_ch_T0000402;gene_name=TTTY1B;ID=intron:HG00140_ch_T0000402:1;Name=TTTY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6077780	6077944	.	+	.	source_transcript=ENST00000735680.1;source_transcript_name=TTTY1B-204;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG00140_ch_T0000402;gene_id=HG00140_ch_G0000099;Parent=HG00140_ch_T0000402;transcript_name=HG00140_ch_T0000402;gene_name=TTTY1B;ID=exon:HG00140_ch_T0000402:2;Name=TTTY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6062804	6083937	1000	+	.	source_transcript=ENST00000250776.5;source_transcript_name=TTTY1B-201;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250776.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250776.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG00140_ch_T0000403;gene_id=HG00140_ch_G0000099;Parent=HG00140_ch_G0000099;transcript_name=HG00140_ch_T0000403;gene_name=TTTY1B;ID=HG00140_ch_T0000403;Name=TTTY1B
HG00140_chrY	CAT	exon	6062804	6063048	.	+	.	source_transcript=ENST00000250776.5;source_transcript_name=TTTY1B-201;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250776.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250776.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG00140_ch_T0000403;gene_id=HG00140_ch_G0000099;Parent=HG00140_ch_T0000403;transcript_name=HG00140_ch_T0000403;gene_name=TTTY1B;ID=exon:HG00140_ch_T0000403:0;Name=TTTY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6063049	6066472	.	+	.	source_transcript=ENST00000250776.5;source_transcript_name=TTTY1B-201;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250776.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250776.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG00140_ch_T0000403;gene_id=HG00140_ch_G0000099;Parent=HG00140_ch_T0000403;transcript_name=HG00140_ch_T0000403;gene_name=TTTY1B;ID=intron:HG00140_ch_T0000403:0;Name=TTTY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6066473	6066632	.	+	.	source_transcript=ENST00000250776.5;source_transcript_name=TTTY1B-201;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250776.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250776.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG00140_ch_T0000403;gene_id=HG00140_ch_G0000099;Parent=HG00140_ch_T0000403;transcript_name=HG00140_ch_T0000403;gene_name=TTTY1B;ID=exon:HG00140_ch_T0000403:1;Name=TTTY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6066633	6073495	.	+	.	source_transcript=ENST00000250776.5;source_transcript_name=TTTY1B-201;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250776.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250776.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG00140_ch_T0000403;gene_id=HG00140_ch_G0000099;Parent=HG00140_ch_T0000403;transcript_name=HG00140_ch_T0000403;gene_name=TTTY1B;ID=intron:HG00140_ch_T0000403:1;Name=TTTY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6073496	6073604	.	+	.	source_transcript=ENST00000250776.5;source_transcript_name=TTTY1B-201;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250776.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250776.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG00140_ch_T0000403;gene_id=HG00140_ch_G0000099;Parent=HG00140_ch_T0000403;transcript_name=HG00140_ch_T0000403;gene_name=TTTY1B;ID=exon:HG00140_ch_T0000403:2;Name=TTTY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6073605	6075960	.	+	.	source_transcript=ENST00000250776.5;source_transcript_name=TTTY1B-201;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250776.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250776.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG00140_ch_T0000403;gene_id=HG00140_ch_G0000099;Parent=HG00140_ch_T0000403;transcript_name=HG00140_ch_T0000403;gene_name=TTTY1B;ID=intron:HG00140_ch_T0000403:2;Name=TTTY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6075961	6076098	.	+	.	source_transcript=ENST00000250776.5;source_transcript_name=TTTY1B-201;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250776.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250776.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG00140_ch_T0000403;gene_id=HG00140_ch_G0000099;Parent=HG00140_ch_T0000403;transcript_name=HG00140_ch_T0000403;gene_name=TTTY1B;ID=exon:HG00140_ch_T0000403:3;Name=TTTY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6076099	6083679	.	+	.	source_transcript=ENST00000250776.5;source_transcript_name=TTTY1B-201;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250776.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250776.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG00140_ch_T0000403;gene_id=HG00140_ch_G0000099;Parent=HG00140_ch_T0000403;transcript_name=HG00140_ch_T0000403;gene_name=TTTY1B;ID=intron:HG00140_ch_T0000403:3;Name=TTTY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6083680	6083937	.	+	.	source_transcript=ENST00000250776.5;source_transcript_name=TTTY1B-201;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250776.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250776.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG00140_ch_T0000403;gene_id=HG00140_ch_G0000099;Parent=HG00140_ch_T0000403;transcript_name=HG00140_ch_T0000403;gene_name=TTTY1B;ID=exon:HG00140_ch_T0000403:4;Name=TTTY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6062809	6069082	1000	+	.	source_transcript=ENST00000735682.1;source_transcript_name=TTTY1B-205;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735682.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG00140_ch_T0000404;gene_id=HG00140_ch_G0000099;Parent=HG00140_ch_G0000099;transcript_name=HG00140_ch_T0000404;gene_name=TTTY1B;ID=HG00140_ch_T0000404;Name=TTTY1B
HG00140_chrY	CAT	exon	6062809	6063048	.	+	.	source_transcript=ENST00000735682.1;source_transcript_name=TTTY1B-205;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735682.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG00140_ch_T0000404;gene_id=HG00140_ch_G0000099;Parent=HG00140_ch_T0000404;transcript_name=HG00140_ch_T0000404;gene_name=TTTY1B;ID=exon:HG00140_ch_T0000404:0;Name=TTTY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6063049	6068834	.	+	.	source_transcript=ENST00000735682.1;source_transcript_name=TTTY1B-205;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735682.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG00140_ch_T0000404;gene_id=HG00140_ch_G0000099;Parent=HG00140_ch_T0000404;transcript_name=HG00140_ch_T0000404;gene_name=TTTY1B;ID=intron:HG00140_ch_T0000404:0;Name=TTTY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6068835	6069082	.	+	.	source_transcript=ENST00000735682.1;source_transcript_name=TTTY1B-205;source_gene=ENSG00000129816.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129816.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735682.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;transcript_id=HG00140_ch_T0000404;gene_id=HG00140_ch_G0000099;Parent=HG00140_ch_T0000404;transcript_name=HG00140_ch_T0000404;gene_name=TTTY1B;ID=exon:HG00140_ch_T0000404:1;Name=TTTY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6078432	6119945	.	-	.	source_gene_common_name=TTTY2;source_gene=ENSG00000212855.6;alternative_source_transcripts=ENST00000757460.1;gene_id=HG00140_ch_G0000100;gene_biotype=lncRNA;gene_name=TTTY2;gene_sources=liftoff;ID=HG00140_ch_G0000100;Name=TTTY2
HG00140_chrY	CAT	transcript	6078432	6118023	1000	-	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1;transcript_id=HG00140_ch_T0000405;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_G0000100;transcript_name=HG00140_ch_T0000405;gene_name=TTTY2;ID=HG00140_ch_T0000405;Name=TTTY2
HG00140_chrY	CAT	exon	6078432	6079296	.	-	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1;transcript_id=HG00140_ch_T0000405;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000405;transcript_name=HG00140_ch_T0000405;gene_name=TTTY2;ID=exon:HG00140_ch_T0000405:0;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6079297	6080519	.	-	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1;transcript_id=HG00140_ch_T0000405;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000405;transcript_name=HG00140_ch_T0000405;gene_name=TTTY2;ID=intron:HG00140_ch_T0000405:0;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6080520	6080717	.	-	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1;transcript_id=HG00140_ch_T0000405;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000405;transcript_name=HG00140_ch_T0000405;gene_name=TTTY2;ID=exon:HG00140_ch_T0000405:1;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6080718	6083746	.	-	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1;transcript_id=HG00140_ch_T0000405;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000405;transcript_name=HG00140_ch_T0000405;gene_name=TTTY2;ID=intron:HG00140_ch_T0000405:1;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6083747	6083903	.	-	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1;transcript_id=HG00140_ch_T0000405;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000405;transcript_name=HG00140_ch_T0000405;gene_name=TTTY2;ID=exon:HG00140_ch_T0000405:2;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6083904	6084516	.	-	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1;transcript_id=HG00140_ch_T0000405;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000405;transcript_name=HG00140_ch_T0000405;gene_name=TTTY2;ID=intron:HG00140_ch_T0000405:2;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6084517	6084744	.	-	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1;transcript_id=HG00140_ch_T0000405;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000405;transcript_name=HG00140_ch_T0000405;gene_name=TTTY2;ID=exon:HG00140_ch_T0000405:3;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6084745	6092138	.	-	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1;transcript_id=HG00140_ch_T0000405;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000405;transcript_name=HG00140_ch_T0000405;gene_name=TTTY2;ID=intron:HG00140_ch_T0000405:3;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6092139	6092225	.	-	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1;transcript_id=HG00140_ch_T0000405;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000405;transcript_name=HG00140_ch_T0000405;gene_name=TTTY2;ID=exon:HG00140_ch_T0000405:4;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6092226	6092576	.	-	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1;transcript_id=HG00140_ch_T0000405;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000405;transcript_name=HG00140_ch_T0000405;gene_name=TTTY2;ID=intron:HG00140_ch_T0000405:4;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6092577	6092681	.	-	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1;transcript_id=HG00140_ch_T0000405;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000405;transcript_name=HG00140_ch_T0000405;gene_name=TTTY2;ID=exon:HG00140_ch_T0000405:5;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6092682	6094701	.	-	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1;transcript_id=HG00140_ch_T0000405;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000405;transcript_name=HG00140_ch_T0000405;gene_name=TTTY2;ID=intron:HG00140_ch_T0000405:5;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6094702	6094779	.	-	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1;transcript_id=HG00140_ch_T0000405;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000405;transcript_name=HG00140_ch_T0000405;gene_name=TTTY2;ID=exon:HG00140_ch_T0000405:6;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6094780	6101305	.	-	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1;transcript_id=HG00140_ch_T0000405;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000405;transcript_name=HG00140_ch_T0000405;gene_name=TTTY2;ID=intron:HG00140_ch_T0000405:6;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6101306	6101516	.	-	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1;transcript_id=HG00140_ch_T0000405;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000405;transcript_name=HG00140_ch_T0000405;gene_name=TTTY2;ID=exon:HG00140_ch_T0000405:7;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6101517	6101690	.	-	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1;transcript_id=HG00140_ch_T0000405;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000405;transcript_name=HG00140_ch_T0000405;gene_name=TTTY2;ID=intron:HG00140_ch_T0000405:7;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6101691	6101778	.	-	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1;transcript_id=HG00140_ch_T0000405;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000405;transcript_name=HG00140_ch_T0000405;gene_name=TTTY2;ID=exon:HG00140_ch_T0000405:8;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6101779	6117822	.	-	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1;transcript_id=HG00140_ch_T0000405;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000405;transcript_name=HG00140_ch_T0000405;gene_name=TTTY2;ID=intron:HG00140_ch_T0000405:8;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6117823	6118023	.	-	.	source_transcript=ENST00000757460.1;source_transcript_name=TTTY2-203;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757460.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757460.1;transcript_id=HG00140_ch_T0000405;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000405;transcript_name=HG00140_ch_T0000405;gene_name=TTTY2;ID=exon:HG00140_ch_T0000405:9;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6078432	6100826	1000	-	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1;transcript_id=HG00140_ch_T0000406;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_G0000100;transcript_name=HG00140_ch_T0000406;gene_name=TTTY2;ID=HG00140_ch_T0000406;Name=TTTY2
HG00140_chrY	CAT	exon	6078432	6079296	.	-	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1;transcript_id=HG00140_ch_T0000406;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000406;transcript_name=HG00140_ch_T0000406;gene_name=TTTY2;ID=exon:HG00140_ch_T0000406:0;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6079297	6080519	.	-	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1;transcript_id=HG00140_ch_T0000406;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000406;transcript_name=HG00140_ch_T0000406;gene_name=TTTY2;ID=intron:HG00140_ch_T0000406:0;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6080520	6080717	.	-	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1;transcript_id=HG00140_ch_T0000406;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000406;transcript_name=HG00140_ch_T0000406;gene_name=TTTY2;ID=exon:HG00140_ch_T0000406:1;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6080718	6083746	.	-	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1;transcript_id=HG00140_ch_T0000406;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000406;transcript_name=HG00140_ch_T0000406;gene_name=TTTY2;ID=intron:HG00140_ch_T0000406:1;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6083747	6083903	.	-	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1;transcript_id=HG00140_ch_T0000406;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000406;transcript_name=HG00140_ch_T0000406;gene_name=TTTY2;ID=exon:HG00140_ch_T0000406:2;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6083904	6084595	.	-	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1;transcript_id=HG00140_ch_T0000406;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000406;transcript_name=HG00140_ch_T0000406;gene_name=TTTY2;ID=intron:HG00140_ch_T0000406:2;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6084596	6084744	.	-	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1;transcript_id=HG00140_ch_T0000406;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000406;transcript_name=HG00140_ch_T0000406;gene_name=TTTY2;ID=exon:HG00140_ch_T0000406:3;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6084745	6092138	.	-	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1;transcript_id=HG00140_ch_T0000406;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000406;transcript_name=HG00140_ch_T0000406;gene_name=TTTY2;ID=intron:HG00140_ch_T0000406:3;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6092139	6092225	.	-	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1;transcript_id=HG00140_ch_T0000406;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000406;transcript_name=HG00140_ch_T0000406;gene_name=TTTY2;ID=exon:HG00140_ch_T0000406:4;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6092226	6092576	.	-	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1;transcript_id=HG00140_ch_T0000406;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000406;transcript_name=HG00140_ch_T0000406;gene_name=TTTY2;ID=intron:HG00140_ch_T0000406:4;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6092577	6092681	.	-	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1;transcript_id=HG00140_ch_T0000406;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000406;transcript_name=HG00140_ch_T0000406;gene_name=TTTY2;ID=exon:HG00140_ch_T0000406:5;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6092682	6094701	.	-	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1;transcript_id=HG00140_ch_T0000406;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000406;transcript_name=HG00140_ch_T0000406;gene_name=TTTY2;ID=intron:HG00140_ch_T0000406:5;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6094702	6094779	.	-	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1;transcript_id=HG00140_ch_T0000406;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000406;transcript_name=HG00140_ch_T0000406;gene_name=TTTY2;ID=exon:HG00140_ch_T0000406:6;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6094780	6100614	.	-	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1;transcript_id=HG00140_ch_T0000406;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000406;transcript_name=HG00140_ch_T0000406;gene_name=TTTY2;ID=intron:HG00140_ch_T0000406:6;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6100615	6100826	.	-	.	source_transcript=ENST00000757463.1;source_transcript_name=TTTY2-206;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757463.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757463.1;transcript_id=HG00140_ch_T0000406;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000406;transcript_name=HG00140_ch_T0000406;gene_name=TTTY2;ID=exon:HG00140_ch_T0000406:7;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6078432	6100825	1000	-	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757465.1;transcript_id=HG00140_ch_T0000407;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_G0000100;transcript_name=HG00140_ch_T0000407;gene_name=TTTY2;ID=HG00140_ch_T0000407;Name=TTTY2
HG00140_chrY	CAT	exon	6078432	6079296	.	-	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757465.1;transcript_id=HG00140_ch_T0000407;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000407;transcript_name=HG00140_ch_T0000407;gene_name=TTTY2;ID=exon:HG00140_ch_T0000407:0;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6079297	6080519	.	-	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757465.1;transcript_id=HG00140_ch_T0000407;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000407;transcript_name=HG00140_ch_T0000407;gene_name=TTTY2;ID=intron:HG00140_ch_T0000407:0;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6080520	6080717	.	-	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757465.1;transcript_id=HG00140_ch_T0000407;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000407;transcript_name=HG00140_ch_T0000407;gene_name=TTTY2;ID=exon:HG00140_ch_T0000407:1;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6080718	6083746	.	-	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757465.1;transcript_id=HG00140_ch_T0000407;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000407;transcript_name=HG00140_ch_T0000407;gene_name=TTTY2;ID=intron:HG00140_ch_T0000407:1;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6083747	6083903	.	-	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757465.1;transcript_id=HG00140_ch_T0000407;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000407;transcript_name=HG00140_ch_T0000407;gene_name=TTTY2;ID=exon:HG00140_ch_T0000407:2;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6083904	6084595	.	-	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757465.1;transcript_id=HG00140_ch_T0000407;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000407;transcript_name=HG00140_ch_T0000407;gene_name=TTTY2;ID=intron:HG00140_ch_T0000407:2;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6084596	6084744	.	-	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757465.1;transcript_id=HG00140_ch_T0000407;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000407;transcript_name=HG00140_ch_T0000407;gene_name=TTTY2;ID=exon:HG00140_ch_T0000407:3;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6084745	6094701	.	-	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757465.1;transcript_id=HG00140_ch_T0000407;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000407;transcript_name=HG00140_ch_T0000407;gene_name=TTTY2;ID=intron:HG00140_ch_T0000407:3;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6094702	6094779	.	-	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757465.1;transcript_id=HG00140_ch_T0000407;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000407;transcript_name=HG00140_ch_T0000407;gene_name=TTTY2;ID=exon:HG00140_ch_T0000407:4;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6094780	6100614	.	-	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757465.1;transcript_id=HG00140_ch_T0000407;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000407;transcript_name=HG00140_ch_T0000407;gene_name=TTTY2;ID=intron:HG00140_ch_T0000407:4;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6100615	6100825	.	-	.	source_transcript=ENST00000757465.1;source_transcript_name=TTTY2-208;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757465.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757465.1;transcript_id=HG00140_ch_T0000407;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000407;transcript_name=HG00140_ch_T0000407;gene_name=TTTY2;ID=exon:HG00140_ch_T0000407:5;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6078432	6086993	1000	-	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000408;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_G0000100;transcript_name=HG00140_ch_T0000408;gene_name=TTTY2;ID=HG00140_ch_T0000408;Name=TTTY2
HG00140_chrY	CAT	exon	6078432	6079296	.	-	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000408;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000408;transcript_name=HG00140_ch_T0000408;gene_name=TTTY2;ID=exon:HG00140_ch_T0000408:0;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6079297	6080519	.	-	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000408;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000408;transcript_name=HG00140_ch_T0000408;gene_name=TTTY2;ID=intron:HG00140_ch_T0000408:0;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6080520	6080717	.	-	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000408;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000408;transcript_name=HG00140_ch_T0000408;gene_name=TTTY2;ID=exon:HG00140_ch_T0000408:1;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6080718	6080837	.	-	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000408;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000408;transcript_name=HG00140_ch_T0000408;gene_name=TTTY2;ID=intron:HG00140_ch_T0000408:1;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6080838	6080916	.	-	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000408;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000408;transcript_name=HG00140_ch_T0000408;gene_name=TTTY2;ID=exon:HG00140_ch_T0000408:2;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6080917	6082549	.	-	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000408;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000408;transcript_name=HG00140_ch_T0000408;gene_name=TTTY2;ID=intron:HG00140_ch_T0000408:2;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6082550	6082767	.	-	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000408;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000408;transcript_name=HG00140_ch_T0000408;gene_name=TTTY2;ID=exon:HG00140_ch_T0000408:3;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6082768	6083746	.	-	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000408;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000408;transcript_name=HG00140_ch_T0000408;gene_name=TTTY2;ID=intron:HG00140_ch_T0000408:3;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6083747	6083903	.	-	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000408;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000408;transcript_name=HG00140_ch_T0000408;gene_name=TTTY2;ID=exon:HG00140_ch_T0000408:4;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6083904	6084595	.	-	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000408;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000408;transcript_name=HG00140_ch_T0000408;gene_name=TTTY2;ID=intron:HG00140_ch_T0000408:4;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6084596	6084744	.	-	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000408;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000408;transcript_name=HG00140_ch_T0000408;gene_name=TTTY2;ID=exon:HG00140_ch_T0000408:5;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6084745	6085036	.	-	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000408;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000408;transcript_name=HG00140_ch_T0000408;gene_name=TTTY2;ID=intron:HG00140_ch_T0000408:5;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6085037	6085123	.	-	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000408;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000408;transcript_name=HG00140_ch_T0000408;gene_name=TTTY2;ID=exon:HG00140_ch_T0000408:6;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6085124	6086856	.	-	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000408;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000408;transcript_name=HG00140_ch_T0000408;gene_name=TTTY2;ID=intron:HG00140_ch_T0000408:6;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6086857	6086993	.	-	.	source_transcript=ENST00000757469.1;source_transcript_name=TTTY2-212;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757469.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000408;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000408;transcript_name=HG00140_ch_T0000408;gene_name=TTTY2;ID=exon:HG00140_ch_T0000408:7;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6078432	6100813	1000	-	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1;transcript_id=HG00140_ch_T0000409;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_G0000100;transcript_name=HG00140_ch_T0000409;gene_name=TTTY2;ID=HG00140_ch_T0000409;Name=TTTY2
HG00140_chrY	CAT	exon	6078432	6079296	.	-	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1;transcript_id=HG00140_ch_T0000409;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000409;transcript_name=HG00140_ch_T0000409;gene_name=TTTY2;ID=exon:HG00140_ch_T0000409:0;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6079297	6080519	.	-	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1;transcript_id=HG00140_ch_T0000409;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000409;transcript_name=HG00140_ch_T0000409;gene_name=TTTY2;ID=intron:HG00140_ch_T0000409:0;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6080520	6080717	.	-	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1;transcript_id=HG00140_ch_T0000409;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000409;transcript_name=HG00140_ch_T0000409;gene_name=TTTY2;ID=exon:HG00140_ch_T0000409:1;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6080718	6080837	.	-	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1;transcript_id=HG00140_ch_T0000409;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000409;transcript_name=HG00140_ch_T0000409;gene_name=TTTY2;ID=intron:HG00140_ch_T0000409:1;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6080838	6080916	.	-	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1;transcript_id=HG00140_ch_T0000409;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000409;transcript_name=HG00140_ch_T0000409;gene_name=TTTY2;ID=exon:HG00140_ch_T0000409:2;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6080917	6083746	.	-	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1;transcript_id=HG00140_ch_T0000409;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000409;transcript_name=HG00140_ch_T0000409;gene_name=TTTY2;ID=intron:HG00140_ch_T0000409:2;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6083747	6083903	.	-	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1;transcript_id=HG00140_ch_T0000409;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000409;transcript_name=HG00140_ch_T0000409;gene_name=TTTY2;ID=exon:HG00140_ch_T0000409:3;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6083904	6084595	.	-	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1;transcript_id=HG00140_ch_T0000409;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000409;transcript_name=HG00140_ch_T0000409;gene_name=TTTY2;ID=intron:HG00140_ch_T0000409:3;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6084596	6084744	.	-	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1;transcript_id=HG00140_ch_T0000409;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000409;transcript_name=HG00140_ch_T0000409;gene_name=TTTY2;ID=exon:HG00140_ch_T0000409:4;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6084745	6092138	.	-	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1;transcript_id=HG00140_ch_T0000409;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000409;transcript_name=HG00140_ch_T0000409;gene_name=TTTY2;ID=intron:HG00140_ch_T0000409:4;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6092139	6092225	.	-	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1;transcript_id=HG00140_ch_T0000409;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000409;transcript_name=HG00140_ch_T0000409;gene_name=TTTY2;ID=exon:HG00140_ch_T0000409:5;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6092226	6094701	.	-	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1;transcript_id=HG00140_ch_T0000409;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000409;transcript_name=HG00140_ch_T0000409;gene_name=TTTY2;ID=intron:HG00140_ch_T0000409:5;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6094702	6094779	.	-	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1;transcript_id=HG00140_ch_T0000409;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000409;transcript_name=HG00140_ch_T0000409;gene_name=TTTY2;ID=exon:HG00140_ch_T0000409:6;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6094780	6100614	.	-	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1;transcript_id=HG00140_ch_T0000409;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000409;transcript_name=HG00140_ch_T0000409;gene_name=TTTY2;ID=intron:HG00140_ch_T0000409:6;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6100615	6100813	.	-	.	source_transcript=ENST00000757466.1;source_transcript_name=TTTY2-209;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757466.1;transcript_id=HG00140_ch_T0000409;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000409;transcript_name=HG00140_ch_T0000409;gene_name=TTTY2;ID=exon:HG00140_ch_T0000409:7;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6078432	6100825	1000	-	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1;transcript_id=HG00140_ch_T0000410;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_G0000100;transcript_name=HG00140_ch_T0000410;gene_name=TTTY2;ID=HG00140_ch_T0000410;Name=TTTY2
HG00140_chrY	CAT	exon	6078432	6079296	.	-	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1;transcript_id=HG00140_ch_T0000410;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000410;transcript_name=HG00140_ch_T0000410;gene_name=TTTY2;ID=exon:HG00140_ch_T0000410:0;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6079297	6080519	.	-	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1;transcript_id=HG00140_ch_T0000410;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000410;transcript_name=HG00140_ch_T0000410;gene_name=TTTY2;ID=intron:HG00140_ch_T0000410:0;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6080520	6080717	.	-	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1;transcript_id=HG00140_ch_T0000410;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000410;transcript_name=HG00140_ch_T0000410;gene_name=TTTY2;ID=exon:HG00140_ch_T0000410:1;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6080718	6080837	.	-	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1;transcript_id=HG00140_ch_T0000410;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000410;transcript_name=HG00140_ch_T0000410;gene_name=TTTY2;ID=intron:HG00140_ch_T0000410:1;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6080838	6080916	.	-	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1;transcript_id=HG00140_ch_T0000410;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000410;transcript_name=HG00140_ch_T0000410;gene_name=TTTY2;ID=exon:HG00140_ch_T0000410:2;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6080917	6082549	.	-	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1;transcript_id=HG00140_ch_T0000410;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000410;transcript_name=HG00140_ch_T0000410;gene_name=TTTY2;ID=intron:HG00140_ch_T0000410:2;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6082550	6082767	.	-	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1;transcript_id=HG00140_ch_T0000410;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000410;transcript_name=HG00140_ch_T0000410;gene_name=TTTY2;ID=exon:HG00140_ch_T0000410:3;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6082768	6083130	.	-	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1;transcript_id=HG00140_ch_T0000410;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000410;transcript_name=HG00140_ch_T0000410;gene_name=TTTY2;ID=intron:HG00140_ch_T0000410:3;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6083131	6083225	.	-	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1;transcript_id=HG00140_ch_T0000410;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000410;transcript_name=HG00140_ch_T0000410;gene_name=TTTY2;ID=exon:HG00140_ch_T0000410:4;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6083226	6083746	.	-	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1;transcript_id=HG00140_ch_T0000410;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000410;transcript_name=HG00140_ch_T0000410;gene_name=TTTY2;ID=intron:HG00140_ch_T0000410:4;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6083747	6083903	.	-	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1;transcript_id=HG00140_ch_T0000410;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000410;transcript_name=HG00140_ch_T0000410;gene_name=TTTY2;ID=exon:HG00140_ch_T0000410:5;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6083904	6084516	.	-	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1;transcript_id=HG00140_ch_T0000410;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000410;transcript_name=HG00140_ch_T0000410;gene_name=TTTY2;ID=intron:HG00140_ch_T0000410:5;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6084517	6084744	.	-	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1;transcript_id=HG00140_ch_T0000410;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000410;transcript_name=HG00140_ch_T0000410;gene_name=TTTY2;ID=exon:HG00140_ch_T0000410:6;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6084745	6094701	.	-	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1;transcript_id=HG00140_ch_T0000410;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000410;transcript_name=HG00140_ch_T0000410;gene_name=TTTY2;ID=intron:HG00140_ch_T0000410:6;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6094702	6094779	.	-	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1;transcript_id=HG00140_ch_T0000410;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000410;transcript_name=HG00140_ch_T0000410;gene_name=TTTY2;ID=exon:HG00140_ch_T0000410:7;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6094780	6100620	.	-	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1;transcript_id=HG00140_ch_T0000410;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000410;transcript_name=HG00140_ch_T0000410;gene_name=TTTY2;ID=intron:HG00140_ch_T0000410:7;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6100621	6100825	.	-	.	source_transcript=ENST00000757464.1;source_transcript_name=TTTY2-207;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757464.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757464.1;transcript_id=HG00140_ch_T0000410;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000410;transcript_name=HG00140_ch_T0000410;gene_name=TTTY2;ID=exon:HG00140_ch_T0000410:8;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6078617	6118039	1000	-	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1;transcript_id=HG00140_ch_T0000411;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_G0000100;transcript_name=HG00140_ch_T0000411;gene_name=TTTY2;ID=HG00140_ch_T0000411;Name=TTTY2
HG00140_chrY	CAT	exon	6078617	6079296	.	-	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1;transcript_id=HG00140_ch_T0000411;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000411;transcript_name=HG00140_ch_T0000411;gene_name=TTTY2;ID=exon:HG00140_ch_T0000411:0;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6079297	6080519	.	-	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1;transcript_id=HG00140_ch_T0000411;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000411;transcript_name=HG00140_ch_T0000411;gene_name=TTTY2;ID=intron:HG00140_ch_T0000411:0;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6080520	6080717	.	-	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1;transcript_id=HG00140_ch_T0000411;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000411;transcript_name=HG00140_ch_T0000411;gene_name=TTTY2;ID=exon:HG00140_ch_T0000411:1;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6080718	6080837	.	-	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1;transcript_id=HG00140_ch_T0000411;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000411;transcript_name=HG00140_ch_T0000411;gene_name=TTTY2;ID=intron:HG00140_ch_T0000411:1;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6080838	6080916	.	-	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1;transcript_id=HG00140_ch_T0000411;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000411;transcript_name=HG00140_ch_T0000411;gene_name=TTTY2;ID=exon:HG00140_ch_T0000411:2;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6080917	6083746	.	-	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1;transcript_id=HG00140_ch_T0000411;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000411;transcript_name=HG00140_ch_T0000411;gene_name=TTTY2;ID=intron:HG00140_ch_T0000411:2;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6083747	6083903	.	-	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1;transcript_id=HG00140_ch_T0000411;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000411;transcript_name=HG00140_ch_T0000411;gene_name=TTTY2;ID=exon:HG00140_ch_T0000411:3;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6083904	6084595	.	-	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1;transcript_id=HG00140_ch_T0000411;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000411;transcript_name=HG00140_ch_T0000411;gene_name=TTTY2;ID=intron:HG00140_ch_T0000411:3;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6084596	6084744	.	-	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1;transcript_id=HG00140_ch_T0000411;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000411;transcript_name=HG00140_ch_T0000411;gene_name=TTTY2;ID=exon:HG00140_ch_T0000411:4;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6084745	6094701	.	-	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1;transcript_id=HG00140_ch_T0000411;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000411;transcript_name=HG00140_ch_T0000411;gene_name=TTTY2;ID=intron:HG00140_ch_T0000411:4;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6094702	6094779	.	-	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1;transcript_id=HG00140_ch_T0000411;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000411;transcript_name=HG00140_ch_T0000411;gene_name=TTTY2;ID=exon:HG00140_ch_T0000411:5;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6094780	6101305	.	-	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1;transcript_id=HG00140_ch_T0000411;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000411;transcript_name=HG00140_ch_T0000411;gene_name=TTTY2;ID=intron:HG00140_ch_T0000411:5;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6101306	6101516	.	-	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1;transcript_id=HG00140_ch_T0000411;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000411;transcript_name=HG00140_ch_T0000411;gene_name=TTTY2;ID=exon:HG00140_ch_T0000411:6;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6101517	6117822	.	-	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1;transcript_id=HG00140_ch_T0000411;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000411;transcript_name=HG00140_ch_T0000411;gene_name=TTTY2;ID=intron:HG00140_ch_T0000411:6;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6117823	6118039	.	-	.	source_transcript=ENST00000757461.1;source_transcript_name=TTTY2-204;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757461.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757461.1;transcript_id=HG00140_ch_T0000411;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000411;transcript_name=HG00140_ch_T0000411;gene_name=TTTY2;ID=exon:HG00140_ch_T0000411:7;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6078617	6096519	1000	-	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000412;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_G0000100;transcript_name=HG00140_ch_T0000412;gene_name=TTTY2;ID=HG00140_ch_T0000412;Name=TTTY2
HG00140_chrY	CAT	exon	6078617	6079296	.	-	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000412;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000412;transcript_name=HG00140_ch_T0000412;gene_name=TTTY2;ID=exon:HG00140_ch_T0000412:0;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6079297	6080519	.	-	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000412;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000412;transcript_name=HG00140_ch_T0000412;gene_name=TTTY2;ID=intron:HG00140_ch_T0000412:0;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6080520	6080717	.	-	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000412;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000412;transcript_name=HG00140_ch_T0000412;gene_name=TTTY2;ID=exon:HG00140_ch_T0000412:1;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6080718	6080837	.	-	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000412;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000412;transcript_name=HG00140_ch_T0000412;gene_name=TTTY2;ID=intron:HG00140_ch_T0000412:1;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6080838	6080916	.	-	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000412;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000412;transcript_name=HG00140_ch_T0000412;gene_name=TTTY2;ID=exon:HG00140_ch_T0000412:2;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6080917	6083746	.	-	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000412;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000412;transcript_name=HG00140_ch_T0000412;gene_name=TTTY2;ID=intron:HG00140_ch_T0000412:2;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6083747	6083903	.	-	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000412;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000412;transcript_name=HG00140_ch_T0000412;gene_name=TTTY2;ID=exon:HG00140_ch_T0000412:3;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6083904	6084595	.	-	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000412;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000412;transcript_name=HG00140_ch_T0000412;gene_name=TTTY2;ID=intron:HG00140_ch_T0000412:3;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6084596	6084744	.	-	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000412;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000412;transcript_name=HG00140_ch_T0000412;gene_name=TTTY2;ID=exon:HG00140_ch_T0000412:4;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6084745	6092138	.	-	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000412;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000412;transcript_name=HG00140_ch_T0000412;gene_name=TTTY2;ID=intron:HG00140_ch_T0000412:4;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6092139	6092225	.	-	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000412;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000412;transcript_name=HG00140_ch_T0000412;gene_name=TTTY2;ID=exon:HG00140_ch_T0000412:5;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6092226	6094701	.	-	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000412;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000412;transcript_name=HG00140_ch_T0000412;gene_name=TTTY2;ID=intron:HG00140_ch_T0000412:5;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6094702	6096519	.	-	.	source_transcript=ENST00000417072.1;source_transcript_name=TTTY2-201;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000412;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000412;transcript_name=HG00140_ch_T0000412;gene_name=TTTY2;ID=exon:HG00140_ch_T0000412:6;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6078620	6115592	1000	-	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1;transcript_id=HG00140_ch_T0000413;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_G0000100;transcript_name=HG00140_ch_T0000413;gene_name=TTTY2;ID=HG00140_ch_T0000413;Name=TTTY2
HG00140_chrY	CAT	exon	6078620	6079296	.	-	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1;transcript_id=HG00140_ch_T0000413;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000413;transcript_name=HG00140_ch_T0000413;gene_name=TTTY2;ID=exon:HG00140_ch_T0000413:0;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6079297	6080519	.	-	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1;transcript_id=HG00140_ch_T0000413;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000413;transcript_name=HG00140_ch_T0000413;gene_name=TTTY2;ID=intron:HG00140_ch_T0000413:0;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6080520	6080717	.	-	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1;transcript_id=HG00140_ch_T0000413;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000413;transcript_name=HG00140_ch_T0000413;gene_name=TTTY2;ID=exon:HG00140_ch_T0000413:1;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6080718	6083746	.	-	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1;transcript_id=HG00140_ch_T0000413;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000413;transcript_name=HG00140_ch_T0000413;gene_name=TTTY2;ID=intron:HG00140_ch_T0000413:1;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6083747	6083903	.	-	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1;transcript_id=HG00140_ch_T0000413;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000413;transcript_name=HG00140_ch_T0000413;gene_name=TTTY2;ID=exon:HG00140_ch_T0000413:2;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6083904	6084595	.	-	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1;transcript_id=HG00140_ch_T0000413;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000413;transcript_name=HG00140_ch_T0000413;gene_name=TTTY2;ID=intron:HG00140_ch_T0000413:2;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6084596	6084744	.	-	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1;transcript_id=HG00140_ch_T0000413;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000413;transcript_name=HG00140_ch_T0000413;gene_name=TTTY2;ID=exon:HG00140_ch_T0000413:3;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6084745	6094701	.	-	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1;transcript_id=HG00140_ch_T0000413;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000413;transcript_name=HG00140_ch_T0000413;gene_name=TTTY2;ID=intron:HG00140_ch_T0000413:3;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6094702	6094779	.	-	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1;transcript_id=HG00140_ch_T0000413;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000413;transcript_name=HG00140_ch_T0000413;gene_name=TTTY2;ID=exon:HG00140_ch_T0000413:4;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6094780	6101305	.	-	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1;transcript_id=HG00140_ch_T0000413;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000413;transcript_name=HG00140_ch_T0000413;gene_name=TTTY2;ID=intron:HG00140_ch_T0000413:4;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6101306	6101516	.	-	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1;transcript_id=HG00140_ch_T0000413;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000413;transcript_name=HG00140_ch_T0000413;gene_name=TTTY2;ID=exon:HG00140_ch_T0000413:5;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6101517	6101690	.	-	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1;transcript_id=HG00140_ch_T0000413;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000413;transcript_name=HG00140_ch_T0000413;gene_name=TTTY2;ID=intron:HG00140_ch_T0000413:5;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6101691	6101778	.	-	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1;transcript_id=HG00140_ch_T0000413;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000413;transcript_name=HG00140_ch_T0000413;gene_name=TTTY2;ID=exon:HG00140_ch_T0000413:6;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6101779	6115407	.	-	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1;transcript_id=HG00140_ch_T0000413;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000413;transcript_name=HG00140_ch_T0000413;gene_name=TTTY2;ID=intron:HG00140_ch_T0000413:6;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6115408	6115592	.	-	.	source_transcript=ENST00000757462.1;source_transcript_name=TTTY2-205;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757462.1;transcript_id=HG00140_ch_T0000413;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000413;transcript_name=HG00140_ch_T0000413;gene_name=TTTY2;ID=exon:HG00140_ch_T0000413:7;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6078621	6100813	1000	-	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757467.1;transcript_id=HG00140_ch_T0000414;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_G0000100;transcript_name=HG00140_ch_T0000414;gene_name=TTTY2;ID=HG00140_ch_T0000414;Name=TTTY2
HG00140_chrY	CAT	exon	6078621	6079296	.	-	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757467.1;transcript_id=HG00140_ch_T0000414;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000414;transcript_name=HG00140_ch_T0000414;gene_name=TTTY2;ID=exon:HG00140_ch_T0000414:0;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6079297	6080519	.	-	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757467.1;transcript_id=HG00140_ch_T0000414;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000414;transcript_name=HG00140_ch_T0000414;gene_name=TTTY2;ID=intron:HG00140_ch_T0000414:0;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6080520	6080717	.	-	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757467.1;transcript_id=HG00140_ch_T0000414;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000414;transcript_name=HG00140_ch_T0000414;gene_name=TTTY2;ID=exon:HG00140_ch_T0000414:1;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6080718	6083746	.	-	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757467.1;transcript_id=HG00140_ch_T0000414;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000414;transcript_name=HG00140_ch_T0000414;gene_name=TTTY2;ID=intron:HG00140_ch_T0000414:1;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6083747	6083903	.	-	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757467.1;transcript_id=HG00140_ch_T0000414;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000414;transcript_name=HG00140_ch_T0000414;gene_name=TTTY2;ID=exon:HG00140_ch_T0000414:2;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6083904	6084516	.	-	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757467.1;transcript_id=HG00140_ch_T0000414;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000414;transcript_name=HG00140_ch_T0000414;gene_name=TTTY2;ID=intron:HG00140_ch_T0000414:2;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6084517	6084744	.	-	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757467.1;transcript_id=HG00140_ch_T0000414;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000414;transcript_name=HG00140_ch_T0000414;gene_name=TTTY2;ID=exon:HG00140_ch_T0000414:3;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6084745	6094701	.	-	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757467.1;transcript_id=HG00140_ch_T0000414;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000414;transcript_name=HG00140_ch_T0000414;gene_name=TTTY2;ID=intron:HG00140_ch_T0000414:3;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6094702	6094779	.	-	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757467.1;transcript_id=HG00140_ch_T0000414;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000414;transcript_name=HG00140_ch_T0000414;gene_name=TTTY2;ID=exon:HG00140_ch_T0000414:4;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6094780	6100614	.	-	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757467.1;transcript_id=HG00140_ch_T0000414;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000414;transcript_name=HG00140_ch_T0000414;gene_name=TTTY2;ID=intron:HG00140_ch_T0000414:4;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6100615	6100813	.	-	.	source_transcript=ENST00000757467.1;source_transcript_name=TTTY2-210;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757467.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757467.1;transcript_id=HG00140_ch_T0000414;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000414;transcript_name=HG00140_ch_T0000414;gene_name=TTTY2;ID=exon:HG00140_ch_T0000414:5;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6078621	6086983	1000	-	.	source_transcript=ENST00000757470.1;source_transcript_name=TTTY2-213;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757470.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757470.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000415;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_G0000100;transcript_name=HG00140_ch_T0000415;gene_name=TTTY2;ID=HG00140_ch_T0000415;Name=TTTY2
HG00140_chrY	CAT	exon	6078621	6079296	.	-	.	source_transcript=ENST00000757470.1;source_transcript_name=TTTY2-213;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757470.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757470.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000415;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000415;transcript_name=HG00140_ch_T0000415;gene_name=TTTY2;ID=exon:HG00140_ch_T0000415:0;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6079297	6080519	.	-	.	source_transcript=ENST00000757470.1;source_transcript_name=TTTY2-213;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757470.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757470.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000415;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000415;transcript_name=HG00140_ch_T0000415;gene_name=TTTY2;ID=intron:HG00140_ch_T0000415:0;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6080520	6080717	.	-	.	source_transcript=ENST00000757470.1;source_transcript_name=TTTY2-213;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757470.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757470.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000415;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000415;transcript_name=HG00140_ch_T0000415;gene_name=TTTY2;ID=exon:HG00140_ch_T0000415:1;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6080718	6083746	.	-	.	source_transcript=ENST00000757470.1;source_transcript_name=TTTY2-213;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757470.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757470.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000415;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000415;transcript_name=HG00140_ch_T0000415;gene_name=TTTY2;ID=intron:HG00140_ch_T0000415:1;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6083747	6083903	.	-	.	source_transcript=ENST00000757470.1;source_transcript_name=TTTY2-213;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757470.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757470.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000415;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000415;transcript_name=HG00140_ch_T0000415;gene_name=TTTY2;ID=exon:HG00140_ch_T0000415:2;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6083904	6084595	.	-	.	source_transcript=ENST00000757470.1;source_transcript_name=TTTY2-213;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757470.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757470.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000415;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000415;transcript_name=HG00140_ch_T0000415;gene_name=TTTY2;ID=intron:HG00140_ch_T0000415:2;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6084596	6084744	.	-	.	source_transcript=ENST00000757470.1;source_transcript_name=TTTY2-213;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757470.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757470.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000415;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000415;transcript_name=HG00140_ch_T0000415;gene_name=TTTY2;ID=exon:HG00140_ch_T0000415:3;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6084745	6086856	.	-	.	source_transcript=ENST00000757470.1;source_transcript_name=TTTY2-213;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757470.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757470.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000415;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000415;transcript_name=HG00140_ch_T0000415;gene_name=TTTY2;ID=intron:HG00140_ch_T0000415:3;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6086857	6086983	.	-	.	source_transcript=ENST00000757470.1;source_transcript_name=TTTY2-213;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757470.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757470.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000415;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000415;transcript_name=HG00140_ch_T0000415;gene_name=TTTY2;ID=exon:HG00140_ch_T0000415:4;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6078784	6119945	1000	-	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1;transcript_id=HG00140_ch_T0000416;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_G0000100;transcript_name=HG00140_ch_T0000416;gene_name=TTTY2;ID=HG00140_ch_T0000416;Name=TTTY2
HG00140_chrY	CAT	exon	6078784	6079296	.	-	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1;transcript_id=HG00140_ch_T0000416;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000416;transcript_name=HG00140_ch_T0000416;gene_name=TTTY2;ID=exon:HG00140_ch_T0000416:0;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6079297	6080519	.	-	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1;transcript_id=HG00140_ch_T0000416;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000416;transcript_name=HG00140_ch_T0000416;gene_name=TTTY2;ID=intron:HG00140_ch_T0000416:0;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6080520	6080717	.	-	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1;transcript_id=HG00140_ch_T0000416;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000416;transcript_name=HG00140_ch_T0000416;gene_name=TTTY2;ID=exon:HG00140_ch_T0000416:1;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6080718	6080837	.	-	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1;transcript_id=HG00140_ch_T0000416;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000416;transcript_name=HG00140_ch_T0000416;gene_name=TTTY2;ID=intron:HG00140_ch_T0000416:1;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6080838	6080916	.	-	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1;transcript_id=HG00140_ch_T0000416;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000416;transcript_name=HG00140_ch_T0000416;gene_name=TTTY2;ID=exon:HG00140_ch_T0000416:2;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6080917	6083746	.	-	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1;transcript_id=HG00140_ch_T0000416;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000416;transcript_name=HG00140_ch_T0000416;gene_name=TTTY2;ID=intron:HG00140_ch_T0000416:2;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6083747	6083903	.	-	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1;transcript_id=HG00140_ch_T0000416;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000416;transcript_name=HG00140_ch_T0000416;gene_name=TTTY2;ID=exon:HG00140_ch_T0000416:3;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6083904	6084595	.	-	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1;transcript_id=HG00140_ch_T0000416;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000416;transcript_name=HG00140_ch_T0000416;gene_name=TTTY2;ID=intron:HG00140_ch_T0000416:3;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6084596	6084744	.	-	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1;transcript_id=HG00140_ch_T0000416;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000416;transcript_name=HG00140_ch_T0000416;gene_name=TTTY2;ID=exon:HG00140_ch_T0000416:4;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6084745	6094701	.	-	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1;transcript_id=HG00140_ch_T0000416;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000416;transcript_name=HG00140_ch_T0000416;gene_name=TTTY2;ID=intron:HG00140_ch_T0000416:4;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6094702	6094779	.	-	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1;transcript_id=HG00140_ch_T0000416;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000416;transcript_name=HG00140_ch_T0000416;gene_name=TTTY2;ID=exon:HG00140_ch_T0000416:5;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6094780	6117822	.	-	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1;transcript_id=HG00140_ch_T0000416;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000416;transcript_name=HG00140_ch_T0000416;gene_name=TTTY2;ID=intron:HG00140_ch_T0000416:5;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6117823	6118729	.	-	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1;transcript_id=HG00140_ch_T0000416;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000416;transcript_name=HG00140_ch_T0000416;gene_name=TTTY2;ID=exon:HG00140_ch_T0000416:6;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6118730	6119759	.	-	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1;transcript_id=HG00140_ch_T0000416;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000416;transcript_name=HG00140_ch_T0000416;gene_name=TTTY2;ID=intron:HG00140_ch_T0000416:6;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6119760	6119945	.	-	.	source_transcript=ENST00000757459.1;source_transcript_name=TTTY2-202;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757459.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757459.1;transcript_id=HG00140_ch_T0000416;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000416;transcript_name=HG00140_ch_T0000416;gene_name=TTTY2;ID=exon:HG00140_ch_T0000416:7;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6079150	6086990	1000	-	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000417;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_G0000100;transcript_name=HG00140_ch_T0000417;gene_name=TTTY2;ID=HG00140_ch_T0000417;Name=TTTY2
HG00140_chrY	CAT	exon	6079150	6079296	.	-	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000417;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000417;transcript_name=HG00140_ch_T0000417;gene_name=TTTY2;ID=exon:HG00140_ch_T0000417:0;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6079297	6080519	.	-	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000417;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000417;transcript_name=HG00140_ch_T0000417;gene_name=TTTY2;ID=intron:HG00140_ch_T0000417:0;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6080520	6080717	.	-	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000417;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000417;transcript_name=HG00140_ch_T0000417;gene_name=TTTY2;ID=exon:HG00140_ch_T0000417:1;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6080718	6080837	.	-	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000417;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000417;transcript_name=HG00140_ch_T0000417;gene_name=TTTY2;ID=intron:HG00140_ch_T0000417:1;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6080838	6080916	.	-	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000417;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000417;transcript_name=HG00140_ch_T0000417;gene_name=TTTY2;ID=exon:HG00140_ch_T0000417:2;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6080917	6083746	.	-	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000417;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000417;transcript_name=HG00140_ch_T0000417;gene_name=TTTY2;ID=intron:HG00140_ch_T0000417:2;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6083747	6083903	.	-	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000417;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000417;transcript_name=HG00140_ch_T0000417;gene_name=TTTY2;ID=exon:HG00140_ch_T0000417:3;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6083904	6084595	.	-	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000417;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000417;transcript_name=HG00140_ch_T0000417;gene_name=TTTY2;ID=intron:HG00140_ch_T0000417:3;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6084596	6084744	.	-	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000417;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000417;transcript_name=HG00140_ch_T0000417;gene_name=TTTY2;ID=exon:HG00140_ch_T0000417:4;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6084745	6085036	.	-	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000417;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000417;transcript_name=HG00140_ch_T0000417;gene_name=TTTY2;ID=intron:HG00140_ch_T0000417:4;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6085037	6085123	.	-	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000417;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000417;transcript_name=HG00140_ch_T0000417;gene_name=TTTY2;ID=exon:HG00140_ch_T0000417:5;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6085124	6086862	.	-	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000417;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000417;transcript_name=HG00140_ch_T0000417;gene_name=TTTY2;ID=intron:HG00140_ch_T0000417:5;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6086863	6086990	.	-	.	source_transcript=ENST00000757471.1;source_transcript_name=TTTY2-214;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757471.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757471.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000417;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000417;transcript_name=HG00140_ch_T0000417;gene_name=TTTY2;ID=exon:HG00140_ch_T0000417:6;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6079152	6100804	1000	-	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1;transcript_id=HG00140_ch_T0000418;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_G0000100;transcript_name=HG00140_ch_T0000418;gene_name=TTTY2;ID=HG00140_ch_T0000418;Name=TTTY2
HG00140_chrY	CAT	exon	6079152	6079296	.	-	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1;transcript_id=HG00140_ch_T0000418;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000418;transcript_name=HG00140_ch_T0000418;gene_name=TTTY2;ID=exon:HG00140_ch_T0000418:0;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6079297	6080519	.	-	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1;transcript_id=HG00140_ch_T0000418;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000418;transcript_name=HG00140_ch_T0000418;gene_name=TTTY2;ID=intron:HG00140_ch_T0000418:0;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6080520	6080717	.	-	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1;transcript_id=HG00140_ch_T0000418;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000418;transcript_name=HG00140_ch_T0000418;gene_name=TTTY2;ID=exon:HG00140_ch_T0000418:1;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6080718	6083746	.	-	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1;transcript_id=HG00140_ch_T0000418;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000418;transcript_name=HG00140_ch_T0000418;gene_name=TTTY2;ID=intron:HG00140_ch_T0000418:1;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6083747	6083903	.	-	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1;transcript_id=HG00140_ch_T0000418;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000418;transcript_name=HG00140_ch_T0000418;gene_name=TTTY2;ID=exon:HG00140_ch_T0000418:2;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6083904	6084516	.	-	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1;transcript_id=HG00140_ch_T0000418;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000418;transcript_name=HG00140_ch_T0000418;gene_name=TTTY2;ID=intron:HG00140_ch_T0000418:2;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6084517	6084744	.	-	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1;transcript_id=HG00140_ch_T0000418;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000418;transcript_name=HG00140_ch_T0000418;gene_name=TTTY2;ID=exon:HG00140_ch_T0000418:3;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6084745	6092138	.	-	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1;transcript_id=HG00140_ch_T0000418;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000418;transcript_name=HG00140_ch_T0000418;gene_name=TTTY2;ID=intron:HG00140_ch_T0000418:3;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6092139	6092225	.	-	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1;transcript_id=HG00140_ch_T0000418;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000418;transcript_name=HG00140_ch_T0000418;gene_name=TTTY2;ID=exon:HG00140_ch_T0000418:4;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6092226	6094701	.	-	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1;transcript_id=HG00140_ch_T0000418;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000418;transcript_name=HG00140_ch_T0000418;gene_name=TTTY2;ID=intron:HG00140_ch_T0000418:4;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6094702	6094779	.	-	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1;transcript_id=HG00140_ch_T0000418;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000418;transcript_name=HG00140_ch_T0000418;gene_name=TTTY2;ID=exon:HG00140_ch_T0000418:5;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6094780	6100614	.	-	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1;transcript_id=HG00140_ch_T0000418;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000418;transcript_name=HG00140_ch_T0000418;gene_name=TTTY2;ID=intron:HG00140_ch_T0000418:5;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6100615	6100804	.	-	.	source_transcript=ENST00000757468.1;source_transcript_name=TTTY2-211;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757468.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=ENST00000757468.1;transcript_id=HG00140_ch_T0000418;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000418;transcript_name=HG00140_ch_T0000418;gene_name=TTTY2;ID=exon:HG00140_ch_T0000418:6;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6083656	6087000	1000	-	.	source_transcript=ENST00000757472.1;source_transcript_name=TTTY2-215;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757472.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757472.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000419;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_G0000100;transcript_name=HG00140_ch_T0000419;gene_name=TTTY2;ID=HG00140_ch_T0000419;Name=TTTY2
HG00140_chrY	CAT	exon	6083656	6083903	.	-	.	source_transcript=ENST00000757472.1;source_transcript_name=TTTY2-215;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757472.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000419;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000419;transcript_name=HG00140_ch_T0000419;gene_name=TTTY2;ID=exon:HG00140_ch_T0000419:0;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6083904	6084595	.	-	.	source_transcript=ENST00000757472.1;source_transcript_name=TTTY2-215;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757472.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000419;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000419;transcript_name=HG00140_ch_T0000419;gene_name=TTTY2;ID=intron:HG00140_ch_T0000419:0;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6084596	6084744	.	-	.	source_transcript=ENST00000757472.1;source_transcript_name=TTTY2-215;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757472.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000419;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000419;transcript_name=HG00140_ch_T0000419;gene_name=TTTY2;ID=exon:HG00140_ch_T0000419:1;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6084745	6085036	.	-	.	source_transcript=ENST00000757472.1;source_transcript_name=TTTY2-215;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757472.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000419;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000419;transcript_name=HG00140_ch_T0000419;gene_name=TTTY2;ID=intron:HG00140_ch_T0000419:1;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6085037	6085123	.	-	.	source_transcript=ENST00000757472.1;source_transcript_name=TTTY2-215;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757472.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000419;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000419;transcript_name=HG00140_ch_T0000419;gene_name=TTTY2;ID=exon:HG00140_ch_T0000419:2;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6085124	6086856	.	-	.	source_transcript=ENST00000757472.1;source_transcript_name=TTTY2-215;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757472.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000419;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000419;transcript_name=HG00140_ch_T0000419;gene_name=TTTY2;ID=intron:HG00140_ch_T0000419:2;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6086857	6087000	.	-	.	source_transcript=ENST00000757472.1;source_transcript_name=TTTY2-215;source_gene=ENSG00000212855.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212855.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757472.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;transcript_id=HG00140_ch_T0000419;gene_id=HG00140_ch_G0000100;Parent=HG00140_ch_T0000419;transcript_name=HG00140_ch_T0000419;gene_name=TTTY2;ID=exon:HG00140_ch_T0000419:3;Name=TTTY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6113241	6130283	.	+	.	source_gene_common_name=TTTY7B;source_gene=ENSG00000147761.10;gene_id=HG00140_ch_G0000101;gene_biotype=lncRNA;gene_name=TTTY7B;gene_sources=liftoff;ID=HG00140_ch_G0000101;Name=TTTY7B
HG00140_chrY	CAT	transcript	6113241	6123065	1000	+	.	source_transcript=ENST00000757619.1;source_transcript_name=TTTY7B-208;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757619.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757619.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000420;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_G0000101;transcript_name=HG00140_ch_T0000420;gene_name=TTTY7B;ID=HG00140_ch_T0000420;Name=TTTY7B
HG00140_chrY	CAT	exon	6113241	6113493	.	+	.	source_transcript=ENST00000757619.1;source_transcript_name=TTTY7B-208;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757619.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757619.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000420;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000420;transcript_name=HG00140_ch_T0000420;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000420:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6113494	6117136	.	+	.	source_transcript=ENST00000757619.1;source_transcript_name=TTTY7B-208;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757619.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757619.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000420;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000420;transcript_name=HG00140_ch_T0000420;gene_name=TTTY7B;ID=intron:HG00140_ch_T0000420:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6117137	6117294	.	+	.	source_transcript=ENST00000757619.1;source_transcript_name=TTTY7B-208;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757619.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757619.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000420;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000420;transcript_name=HG00140_ch_T0000420;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000420:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6117295	6122902	.	+	.	source_transcript=ENST00000757619.1;source_transcript_name=TTTY7B-208;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757619.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757619.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000420;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000420;transcript_name=HG00140_ch_T0000420;gene_name=TTTY7B;ID=intron:HG00140_ch_T0000420:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6122903	6123065	.	+	.	source_transcript=ENST00000757619.1;source_transcript_name=TTTY7B-208;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757619.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757619.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000420;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000420;transcript_name=HG00140_ch_T0000420;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000420:2;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6115693	6123077	1000	+	.	source_transcript=ENST00000757620.1;source_transcript_name=TTTY7B-209;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757620.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757620.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000421;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_G0000101;transcript_name=HG00140_ch_T0000421;gene_name=TTTY7B;ID=HG00140_ch_T0000421;Name=TTTY7B
HG00140_chrY	CAT	exon	6115693	6116012	.	+	.	source_transcript=ENST00000757620.1;source_transcript_name=TTTY7B-209;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757620.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757620.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000421;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000421;transcript_name=HG00140_ch_T0000421;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000421:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6116013	6122902	.	+	.	source_transcript=ENST00000757620.1;source_transcript_name=TTTY7B-209;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757620.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757620.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000421;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000421;transcript_name=HG00140_ch_T0000421;gene_name=TTTY7B;ID=intron:HG00140_ch_T0000421:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6122903	6123077	.	+	.	source_transcript=ENST00000757620.1;source_transcript_name=TTTY7B-209;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757620.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757620.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000421;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000421;transcript_name=HG00140_ch_T0000421;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000421:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6115700	6123078	1000	+	.	source_transcript=ENST00000757621.1;source_transcript_name=TTTY7B-210;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757621.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757621.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000422;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_G0000101;transcript_name=HG00140_ch_T0000422;gene_name=TTTY7B;ID=HG00140_ch_T0000422;Name=TTTY7B
HG00140_chrY	CAT	exon	6115700	6116012	.	+	.	source_transcript=ENST00000757621.1;source_transcript_name=TTTY7B-210;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757621.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757621.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000422;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000422;transcript_name=HG00140_ch_T0000422;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000422:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6116013	6117136	.	+	.	source_transcript=ENST00000757621.1;source_transcript_name=TTTY7B-210;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757621.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757621.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000422;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000422;transcript_name=HG00140_ch_T0000422;gene_name=TTTY7B;ID=intron:HG00140_ch_T0000422:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6117137	6117294	.	+	.	source_transcript=ENST00000757621.1;source_transcript_name=TTTY7B-210;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757621.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757621.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000422;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000422;transcript_name=HG00140_ch_T0000422;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000422:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6117295	6122902	.	+	.	source_transcript=ENST00000757621.1;source_transcript_name=TTTY7B-210;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757621.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757621.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000422;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000422;transcript_name=HG00140_ch_T0000422;gene_name=TTTY7B;ID=intron:HG00140_ch_T0000422:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6122903	6123078	.	+	.	source_transcript=ENST00000757621.1;source_transcript_name=TTTY7B-210;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757621.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757621.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000422;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000422;transcript_name=HG00140_ch_T0000422;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000422:2;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6115713	6123071	1000	+	.	source_transcript=ENST00000430228.2;source_transcript_name=TTTY7B-203;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430228.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430228.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000423;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_G0000101;transcript_name=HG00140_ch_T0000423;gene_name=TTTY7B;ID=HG00140_ch_T0000423;Name=TTTY7B
HG00140_chrY	CAT	exon	6115713	6116012	.	+	.	source_transcript=ENST00000430228.2;source_transcript_name=TTTY7B-203;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430228.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430228.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000423;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000423;transcript_name=HG00140_ch_T0000423;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000423:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6116013	6119349	.	+	.	source_transcript=ENST00000430228.2;source_transcript_name=TTTY7B-203;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430228.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430228.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000423;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000423;transcript_name=HG00140_ch_T0000423;gene_name=TTTY7B;ID=intron:HG00140_ch_T0000423:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6119350	6119483	.	+	.	source_transcript=ENST00000430228.2;source_transcript_name=TTTY7B-203;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430228.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430228.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000423;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000423;transcript_name=HG00140_ch_T0000423;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000423:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6119484	6122902	.	+	.	source_transcript=ENST00000430228.2;source_transcript_name=TTTY7B-203;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430228.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430228.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000423;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000423;transcript_name=HG00140_ch_T0000423;gene_name=TTTY7B;ID=intron:HG00140_ch_T0000423:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6122903	6123071	.	+	.	source_transcript=ENST00000430228.2;source_transcript_name=TTTY7B-203;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430228.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430228.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000423;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000423;transcript_name=HG00140_ch_T0000423;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000423:2;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6115721	6130283	1000	+	.	source_transcript=ENST00000715682.1;source_transcript_name=TTTY7B-205;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715682.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000424;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_G0000101;transcript_name=HG00140_ch_T0000424;gene_name=TTTY7B;ID=HG00140_ch_T0000424;Name=TTTY7B
HG00140_chrY	CAT	exon	6115721	6116012	.	+	.	source_transcript=ENST00000715682.1;source_transcript_name=TTTY7B-205;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715682.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000424;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000424;transcript_name=HG00140_ch_T0000424;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000424:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6116013	6122902	.	+	.	source_transcript=ENST00000715682.1;source_transcript_name=TTTY7B-205;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715682.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000424;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000424;transcript_name=HG00140_ch_T0000424;gene_name=TTTY7B;ID=intron:HG00140_ch_T0000424:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6122903	6122984	.	+	.	source_transcript=ENST00000715682.1;source_transcript_name=TTTY7B-205;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715682.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000424;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000424;transcript_name=HG00140_ch_T0000424;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000424:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6122985	6125291	.	+	.	source_transcript=ENST00000715682.1;source_transcript_name=TTTY7B-205;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715682.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000424;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000424;transcript_name=HG00140_ch_T0000424;gene_name=TTTY7B;ID=intron:HG00140_ch_T0000424:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6125292	6125366	.	+	.	source_transcript=ENST00000715682.1;source_transcript_name=TTTY7B-205;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715682.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000424;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000424;transcript_name=HG00140_ch_T0000424;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000424:2;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6125367	6128448	.	+	.	source_transcript=ENST00000715682.1;source_transcript_name=TTTY7B-205;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715682.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000424;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000424;transcript_name=HG00140_ch_T0000424;gene_name=TTTY7B;ID=intron:HG00140_ch_T0000424:2;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6128449	6128562	.	+	.	source_transcript=ENST00000715682.1;source_transcript_name=TTTY7B-205;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715682.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000424;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000424;transcript_name=HG00140_ch_T0000424;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000424:3;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6128563	6130037	.	+	.	source_transcript=ENST00000715682.1;source_transcript_name=TTTY7B-205;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715682.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000424;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000424;transcript_name=HG00140_ch_T0000424;gene_name=TTTY7B;ID=intron:HG00140_ch_T0000424:3;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6130038	6130283	.	+	.	source_transcript=ENST00000715682.1;source_transcript_name=TTTY7B-205;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715682.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715682.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000424;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000424;transcript_name=HG00140_ch_T0000424;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000424:4;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6115721	6130283	1000	+	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000425;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_G0000101;transcript_name=HG00140_ch_T0000425;gene_name=TTTY7B;ID=HG00140_ch_T0000425;Name=TTTY7B
HG00140_chrY	CAT	exon	6115721	6116012	.	+	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000425;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000425;transcript_name=HG00140_ch_T0000425;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000425:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6116013	6117136	.	+	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000425;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000425;transcript_name=HG00140_ch_T0000425;gene_name=TTTY7B;ID=intron:HG00140_ch_T0000425:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6117137	6117294	.	+	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000425;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000425;transcript_name=HG00140_ch_T0000425;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000425:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6117295	6122902	.	+	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000425;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000425;transcript_name=HG00140_ch_T0000425;gene_name=TTTY7B;ID=intron:HG00140_ch_T0000425:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6122903	6122984	.	+	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000425;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000425;transcript_name=HG00140_ch_T0000425;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000425:2;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6122985	6125291	.	+	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000425;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000425;transcript_name=HG00140_ch_T0000425;gene_name=TTTY7B;ID=intron:HG00140_ch_T0000425:2;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6125292	6125366	.	+	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000425;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000425;transcript_name=HG00140_ch_T0000425;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000425:3;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6125367	6128448	.	+	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000425;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000425;transcript_name=HG00140_ch_T0000425;gene_name=TTTY7B;ID=intron:HG00140_ch_T0000425:3;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6128449	6128562	.	+	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000425;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000425;transcript_name=HG00140_ch_T0000425;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000425:4;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6128563	6130037	.	+	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000425;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000425;transcript_name=HG00140_ch_T0000425;gene_name=TTTY7B;ID=intron:HG00140_ch_T0000425:4;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6130038	6130283	.	+	.	source_transcript=ENST00000757617.1;source_transcript_name=TTTY7B-206;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000425;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000425;transcript_name=HG00140_ch_T0000425;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000425:5;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6115722	6123072	1000	+	.	source_transcript=ENST00000757622.1;source_transcript_name=TTTY7B-211;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757622.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757622.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000426;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_G0000101;transcript_name=HG00140_ch_T0000426;gene_name=TTTY7B;ID=HG00140_ch_T0000426;Name=TTTY7B
HG00140_chrY	CAT	exon	6115722	6116012	.	+	.	source_transcript=ENST00000757622.1;source_transcript_name=TTTY7B-211;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757622.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757622.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000426;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000426;transcript_name=HG00140_ch_T0000426;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000426:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6116013	6117136	.	+	.	source_transcript=ENST00000757622.1;source_transcript_name=TTTY7B-211;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757622.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757622.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000426;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000426;transcript_name=HG00140_ch_T0000426;gene_name=TTTY7B;ID=intron:HG00140_ch_T0000426:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6117137	6117294	.	+	.	source_transcript=ENST00000757622.1;source_transcript_name=TTTY7B-211;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757622.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757622.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000426;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000426;transcript_name=HG00140_ch_T0000426;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000426:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6117295	6119349	.	+	.	source_transcript=ENST00000757622.1;source_transcript_name=TTTY7B-211;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757622.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757622.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000426;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000426;transcript_name=HG00140_ch_T0000426;gene_name=TTTY7B;ID=intron:HG00140_ch_T0000426:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6119350	6119483	.	+	.	source_transcript=ENST00000757622.1;source_transcript_name=TTTY7B-211;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757622.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757622.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000426;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000426;transcript_name=HG00140_ch_T0000426;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000426:2;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6119484	6119879	.	+	.	source_transcript=ENST00000757622.1;source_transcript_name=TTTY7B-211;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757622.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757622.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000426;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000426;transcript_name=HG00140_ch_T0000426;gene_name=TTTY7B;ID=intron:HG00140_ch_T0000426:2;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6119880	6119986	.	+	.	source_transcript=ENST00000757622.1;source_transcript_name=TTTY7B-211;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757622.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757622.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000426;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000426;transcript_name=HG00140_ch_T0000426;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000426:3;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6119987	6122902	.	+	.	source_transcript=ENST00000757622.1;source_transcript_name=TTTY7B-211;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757622.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757622.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000426;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000426;transcript_name=HG00140_ch_T0000426;gene_name=TTTY7B;ID=intron:HG00140_ch_T0000426:3;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6122903	6123072	.	+	.	source_transcript=ENST00000757622.1;source_transcript_name=TTTY7B-211;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757622.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757622.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000426;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000426;transcript_name=HG00140_ch_T0000426;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000426:4;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6115726	6123066	1000	+	.	source_transcript=ENST00000757624.1;source_transcript_name=TTTY7B-213;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757624.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757624.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000427;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_G0000101;transcript_name=HG00140_ch_T0000427;gene_name=TTTY7B;ID=HG00140_ch_T0000427;Name=TTTY7B
HG00140_chrY	CAT	exon	6115726	6116012	.	+	.	source_transcript=ENST00000757624.1;source_transcript_name=TTTY7B-213;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757624.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000427;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000427;transcript_name=HG00140_ch_T0000427;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000427:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6116013	6119879	.	+	.	source_transcript=ENST00000757624.1;source_transcript_name=TTTY7B-213;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757624.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000427;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000427;transcript_name=HG00140_ch_T0000427;gene_name=TTTY7B;ID=intron:HG00140_ch_T0000427:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6119880	6119986	.	+	.	source_transcript=ENST00000757624.1;source_transcript_name=TTTY7B-213;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757624.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000427;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000427;transcript_name=HG00140_ch_T0000427;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000427:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6119987	6122902	.	+	.	source_transcript=ENST00000757624.1;source_transcript_name=TTTY7B-213;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757624.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000427;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000427;transcript_name=HG00140_ch_T0000427;gene_name=TTTY7B;ID=intron:HG00140_ch_T0000427:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6122903	6123066	.	+	.	source_transcript=ENST00000757624.1;source_transcript_name=TTTY7B-213;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757624.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000427;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000427;transcript_name=HG00140_ch_T0000427;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000427:2;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6115726	6123073	1000	+	.	source_transcript=ENST00000757623.1;source_transcript_name=TTTY7B-212;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757623.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757623.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000428;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_G0000101;transcript_name=HG00140_ch_T0000428;gene_name=TTTY7B;ID=HG00140_ch_T0000428;Name=TTTY7B
HG00140_chrY	CAT	exon	6115726	6116012	.	+	.	source_transcript=ENST00000757623.1;source_transcript_name=TTTY7B-212;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757623.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757623.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000428;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000428;transcript_name=HG00140_ch_T0000428;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000428:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6116013	6119349	.	+	.	source_transcript=ENST00000757623.1;source_transcript_name=TTTY7B-212;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757623.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757623.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000428;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000428;transcript_name=HG00140_ch_T0000428;gene_name=TTTY7B;ID=intron:HG00140_ch_T0000428:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6119350	6119483	.	+	.	source_transcript=ENST00000757623.1;source_transcript_name=TTTY7B-212;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757623.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757623.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000428;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000428;transcript_name=HG00140_ch_T0000428;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000428:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6119484	6119879	.	+	.	source_transcript=ENST00000757623.1;source_transcript_name=TTTY7B-212;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757623.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757623.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000428;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000428;transcript_name=HG00140_ch_T0000428;gene_name=TTTY7B;ID=intron:HG00140_ch_T0000428:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6119880	6119986	.	+	.	source_transcript=ENST00000757623.1;source_transcript_name=TTTY7B-212;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757623.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757623.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000428;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000428;transcript_name=HG00140_ch_T0000428;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000428:2;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6119987	6122902	.	+	.	source_transcript=ENST00000757623.1;source_transcript_name=TTTY7B-212;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757623.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757623.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000428;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000428;transcript_name=HG00140_ch_T0000428;gene_name=TTTY7B;ID=intron:HG00140_ch_T0000428:2;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6122903	6123073	.	+	.	source_transcript=ENST00000757623.1;source_transcript_name=TTTY7B-212;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757623.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757623.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000428;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000428;transcript_name=HG00140_ch_T0000428;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000428:3;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6115747	6119520	1000	+	.	source_transcript=ENST00000757628.1;source_transcript_name=TTTY7B-217;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757628.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757628.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000429;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_G0000101;transcript_name=HG00140_ch_T0000429;gene_name=TTTY7B;ID=HG00140_ch_T0000429;Name=TTTY7B
HG00140_chrY	CAT	exon	6115747	6116012	.	+	.	source_transcript=ENST00000757628.1;source_transcript_name=TTTY7B-217;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757628.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757628.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000429;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000429;transcript_name=HG00140_ch_T0000429;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000429:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6116013	6119349	.	+	.	source_transcript=ENST00000757628.1;source_transcript_name=TTTY7B-217;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757628.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757628.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000429;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000429;transcript_name=HG00140_ch_T0000429;gene_name=TTTY7B;ID=intron:HG00140_ch_T0000429:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6119350	6119520	.	+	.	source_transcript=ENST00000757628.1;source_transcript_name=TTTY7B-217;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757628.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757628.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000429;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000429;transcript_name=HG00140_ch_T0000429;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000429:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6115747	6123068	1000	+	.	source_transcript=ENST00000757625.1;source_transcript_name=TTTY7B-214;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757625.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757625.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000430;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_G0000101;transcript_name=HG00140_ch_T0000430;gene_name=TTTY7B;ID=HG00140_ch_T0000430;Name=TTTY7B
HG00140_chrY	CAT	exon	6115747	6116012	.	+	.	source_transcript=ENST00000757625.1;source_transcript_name=TTTY7B-214;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757625.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757625.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000430;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000430;transcript_name=HG00140_ch_T0000430;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000430:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6116013	6117136	.	+	.	source_transcript=ENST00000757625.1;source_transcript_name=TTTY7B-214;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757625.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757625.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000430;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000430;transcript_name=HG00140_ch_T0000430;gene_name=TTTY7B;ID=intron:HG00140_ch_T0000430:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6117137	6117294	.	+	.	source_transcript=ENST00000757625.1;source_transcript_name=TTTY7B-214;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757625.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757625.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000430;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000430;transcript_name=HG00140_ch_T0000430;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000430:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6117295	6119349	.	+	.	source_transcript=ENST00000757625.1;source_transcript_name=TTTY7B-214;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757625.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757625.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000430;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000430;transcript_name=HG00140_ch_T0000430;gene_name=TTTY7B;ID=intron:HG00140_ch_T0000430:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6119350	6119483	.	+	.	source_transcript=ENST00000757625.1;source_transcript_name=TTTY7B-214;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757625.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757625.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000430;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000430;transcript_name=HG00140_ch_T0000430;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000430:2;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6119484	6122902	.	+	.	source_transcript=ENST00000757625.1;source_transcript_name=TTTY7B-214;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757625.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757625.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000430;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000430;transcript_name=HG00140_ch_T0000430;gene_name=TTTY7B;ID=intron:HG00140_ch_T0000430:2;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6122903	6123068	.	+	.	source_transcript=ENST00000757625.1;source_transcript_name=TTTY7B-214;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757625.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757625.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000430;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000430;transcript_name=HG00140_ch_T0000430;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000430:3;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6118128	6123065	1000	+	.	source_transcript=ENST00000757626.1;source_transcript_name=TTTY7B-215;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757626.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757626.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000431;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_G0000101;transcript_name=HG00140_ch_T0000431;gene_name=TTTY7B;ID=HG00140_ch_T0000431;Name=TTTY7B
HG00140_chrY	CAT	exon	6118128	6118429	.	+	.	source_transcript=ENST00000757626.1;source_transcript_name=TTTY7B-215;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757626.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757626.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000431;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000431;transcript_name=HG00140_ch_T0000431;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000431:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6118430	6122902	.	+	.	source_transcript=ENST00000757626.1;source_transcript_name=TTTY7B-215;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757626.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757626.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000431;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000431;transcript_name=HG00140_ch_T0000431;gene_name=TTTY7B;ID=intron:HG00140_ch_T0000431:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6122903	6123065	.	+	.	source_transcript=ENST00000757626.1;source_transcript_name=TTTY7B-215;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757626.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757626.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000431;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000431;transcript_name=HG00140_ch_T0000431;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000431:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6118136	6130279	1000	+	.	source_transcript=ENST00000757618.1;source_transcript_name=TTTY7B-207;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757618.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757618.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000432;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_G0000101;transcript_name=HG00140_ch_T0000432;gene_name=TTTY7B;ID=HG00140_ch_T0000432;Name=TTTY7B
HG00140_chrY	CAT	exon	6118136	6118429	.	+	.	source_transcript=ENST00000757618.1;source_transcript_name=TTTY7B-207;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757618.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757618.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000432;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000432;transcript_name=HG00140_ch_T0000432;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000432:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6118430	6122902	.	+	.	source_transcript=ENST00000757618.1;source_transcript_name=TTTY7B-207;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757618.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757618.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000432;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000432;transcript_name=HG00140_ch_T0000432;gene_name=TTTY7B;ID=intron:HG00140_ch_T0000432:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6122903	6122984	.	+	.	source_transcript=ENST00000757618.1;source_transcript_name=TTTY7B-207;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757618.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757618.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000432;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000432;transcript_name=HG00140_ch_T0000432;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000432:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6122985	6125291	.	+	.	source_transcript=ENST00000757618.1;source_transcript_name=TTTY7B-207;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757618.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757618.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000432;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000432;transcript_name=HG00140_ch_T0000432;gene_name=TTTY7B;ID=intron:HG00140_ch_T0000432:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6125292	6125366	.	+	.	source_transcript=ENST00000757618.1;source_transcript_name=TTTY7B-207;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757618.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757618.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000432;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000432;transcript_name=HG00140_ch_T0000432;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000432:2;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6125367	6128448	.	+	.	source_transcript=ENST00000757618.1;source_transcript_name=TTTY7B-207;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757618.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757618.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000432;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000432;transcript_name=HG00140_ch_T0000432;gene_name=TTTY7B;ID=intron:HG00140_ch_T0000432:2;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6128449	6128562	.	+	.	source_transcript=ENST00000757618.1;source_transcript_name=TTTY7B-207;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757618.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757618.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000432;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000432;transcript_name=HG00140_ch_T0000432;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000432:3;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6128563	6130037	.	+	.	source_transcript=ENST00000757618.1;source_transcript_name=TTTY7B-207;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757618.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757618.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000432;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000432;transcript_name=HG00140_ch_T0000432;gene_name=TTTY7B;ID=intron:HG00140_ch_T0000432:3;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6130038	6130279	.	+	.	source_transcript=ENST00000757618.1;source_transcript_name=TTTY7B-207;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757618.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757618.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000432;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000432;transcript_name=HG00140_ch_T0000432;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000432:4;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6121387	6123065	1000	+	.	source_transcript=ENST00000757629.1;source_transcript_name=TTTY7B-218;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757629.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757629.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000433;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_G0000101;transcript_name=HG00140_ch_T0000433;gene_name=TTTY7B;ID=HG00140_ch_T0000433;Name=TTTY7B
HG00140_chrY	CAT	exon	6121387	6122327	.	+	.	source_transcript=ENST00000757629.1;source_transcript_name=TTTY7B-218;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757629.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757629.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000433;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000433;transcript_name=HG00140_ch_T0000433;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000433:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6122328	6122902	.	+	.	source_transcript=ENST00000757629.1;source_transcript_name=TTTY7B-218;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757629.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757629.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000433;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000433;transcript_name=HG00140_ch_T0000433;gene_name=TTTY7B;ID=intron:HG00140_ch_T0000433:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6122903	6123065	.	+	.	source_transcript=ENST00000757629.1;source_transcript_name=TTTY7B-218;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757629.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757629.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000433;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000433;transcript_name=HG00140_ch_T0000433;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000433:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6121845	6130283	1000	+	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000434;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_G0000101;transcript_name=HG00140_ch_T0000434;gene_name=TTTY7B;ID=HG00140_ch_T0000434;Name=TTTY7B
HG00140_chrY	CAT	exon	6121845	6121881	.	+	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000434;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000434;transcript_name=HG00140_ch_T0000434;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000434:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6121882	6122822	.	+	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000434;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000434;transcript_name=HG00140_ch_T0000434;gene_name=TTTY7B;ID=intron:HG00140_ch_T0000434:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6122823	6122984	.	+	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000434;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000434;transcript_name=HG00140_ch_T0000434;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000434:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6122985	6125291	.	+	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000434;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000434;transcript_name=HG00140_ch_T0000434;gene_name=TTTY7B;ID=intron:HG00140_ch_T0000434:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6125292	6125366	.	+	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000434;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000434;transcript_name=HG00140_ch_T0000434;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000434:2;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6125367	6126054	.	+	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000434;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000434;transcript_name=HG00140_ch_T0000434;gene_name=TTTY7B;ID=intron:HG00140_ch_T0000434:2;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6126055	6126531	.	+	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000434;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000434;transcript_name=HG00140_ch_T0000434;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000434:3;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6126532	6128448	.	+	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000434;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000434;transcript_name=HG00140_ch_T0000434;gene_name=TTTY7B;ID=intron:HG00140_ch_T0000434:3;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6128449	6128562	.	+	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000434;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000434;transcript_name=HG00140_ch_T0000434;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000434:4;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6128563	6129535	.	+	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000434;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000434;transcript_name=HG00140_ch_T0000434;gene_name=TTTY7B;ID=intron:HG00140_ch_T0000434:4;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6129536	6129791	.	+	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000434;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000434;transcript_name=HG00140_ch_T0000434;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000434:5;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6129792	6130037	.	+	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000434;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000434;transcript_name=HG00140_ch_T0000434;gene_name=TTTY7B;ID=intron:HG00140_ch_T0000434:5;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6130038	6130283	.	+	.	source_transcript=ENST00000276779.8;source_transcript_name=TTTY7B-201;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276779.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276779.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000434;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000434;transcript_name=HG00140_ch_T0000434;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000434:6;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6121845	6130283	1000	+	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000435;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_G0000101;transcript_name=HG00140_ch_T0000435;gene_name=TTTY7B;ID=HG00140_ch_T0000435;Name=TTTY7B
HG00140_chrY	CAT	exon	6121845	6121881	.	+	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000435;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000435;transcript_name=HG00140_ch_T0000435;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000435:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6121882	6122822	.	+	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000435;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000435;transcript_name=HG00140_ch_T0000435;gene_name=TTTY7B;ID=intron:HG00140_ch_T0000435:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6122823	6122984	.	+	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000435;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000435;transcript_name=HG00140_ch_T0000435;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000435:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6122985	6125291	.	+	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000435;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000435;transcript_name=HG00140_ch_T0000435;gene_name=TTTY7B;ID=intron:HG00140_ch_T0000435:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6125292	6125366	.	+	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000435;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000435;transcript_name=HG00140_ch_T0000435;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000435:2;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6125367	6126054	.	+	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000435;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000435;transcript_name=HG00140_ch_T0000435;gene_name=TTTY7B;ID=intron:HG00140_ch_T0000435:2;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6126055	6126531	.	+	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000435;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000435;transcript_name=HG00140_ch_T0000435;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000435:3;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6126532	6128448	.	+	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000435;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000435;transcript_name=HG00140_ch_T0000435;gene_name=TTTY7B;ID=intron:HG00140_ch_T0000435:3;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6128449	6128562	.	+	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000435;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000435;transcript_name=HG00140_ch_T0000435;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000435:4;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6128563	6130037	.	+	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000435;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000435;transcript_name=HG00140_ch_T0000435;gene_name=TTTY7B;ID=intron:HG00140_ch_T0000435:4;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6130038	6130283	.	+	.	source_transcript=ENST00000415405.1;source_transcript_name=TTTY7B-202;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000415405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000435;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000435;transcript_name=HG00140_ch_T0000435;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000435:5;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6126230	6130283	1000	+	.	source_transcript=ENST00000757627.1;source_transcript_name=TTTY7B-216;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757627.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757627.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000436;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_G0000101;transcript_name=HG00140_ch_T0000436;gene_name=TTTY7B;ID=HG00140_ch_T0000436;Name=TTTY7B
HG00140_chrY	CAT	exon	6126230	6126531	.	+	.	source_transcript=ENST00000757627.1;source_transcript_name=TTTY7B-216;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757627.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757627.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000436;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000436;transcript_name=HG00140_ch_T0000436;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000436:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6126532	6130037	.	+	.	source_transcript=ENST00000757627.1;source_transcript_name=TTTY7B-216;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757627.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757627.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000436;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000436;transcript_name=HG00140_ch_T0000436;gene_name=TTTY7B;ID=intron:HG00140_ch_T0000436:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6130038	6130283	.	+	.	source_transcript=ENST00000757627.1;source_transcript_name=TTTY7B-216;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000757627.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000757627.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000436;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000436;transcript_name=HG00140_ch_T0000436;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000436:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6126282	6130283	1000	+	.	source_transcript=ENST00000447655.5;source_transcript_name=TTTY7B-204;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447655.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000447655.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000437;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_G0000101;transcript_name=HG00140_ch_T0000437;gene_name=TTTY7B;ID=HG00140_ch_T0000437;Name=TTTY7B
HG00140_chrY	CAT	exon	6126282	6126531	.	+	.	source_transcript=ENST00000447655.5;source_transcript_name=TTTY7B-204;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447655.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000447655.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000437;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000437;transcript_name=HG00140_ch_T0000437;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000437:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6126532	6128349	.	+	.	source_transcript=ENST00000447655.5;source_transcript_name=TTTY7B-204;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447655.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000447655.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000437;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000437;transcript_name=HG00140_ch_T0000437;gene_name=TTTY7B;ID=intron:HG00140_ch_T0000437:0;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6128350	6128562	.	+	.	source_transcript=ENST00000447655.5;source_transcript_name=TTTY7B-204;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447655.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000447655.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000437;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000437;transcript_name=HG00140_ch_T0000437;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000437:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6128563	6130037	.	+	.	source_transcript=ENST00000447655.5;source_transcript_name=TTTY7B-204;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447655.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000447655.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000437;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000437;transcript_name=HG00140_ch_T0000437;gene_name=TTTY7B;ID=intron:HG00140_ch_T0000437:1;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6130038	6130283	.	+	.	source_transcript=ENST00000447655.5;source_transcript_name=TTTY7B-204;source_gene=ENSG00000147761.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147761.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447655.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000447655.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;transcript_id=HG00140_ch_T0000437;gene_id=HG00140_ch_G0000101;Parent=HG00140_ch_T0000437;transcript_name=HG00140_ch_T0000437;gene_name=TTTY7B;ID=exon:HG00140_ch_T0000437:2;Name=TTTY7B;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6135412	6146068	.	-	.	source_gene_common_name=TTTY8;source_gene=ENSG00000183385.10;gene_id=HG00140_ch_G0000102;gene_biotype=lncRNA;gene_name=TTTY8;gene_sources=liftoff;ID=HG00140_ch_G0000102;Name=TTTY8
HG00140_chrY	CAT	transcript	6135412	6146064	1000	-	.	source_transcript=ENST00000849214.1;source_transcript_name=TTTY8-203;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849214.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;transcript_id=HG00140_ch_T0000438;gene_id=HG00140_ch_G0000102;Parent=HG00140_ch_G0000102;transcript_name=HG00140_ch_T0000438;gene_name=TTTY8;ID=HG00140_ch_T0000438;Name=TTTY8
HG00140_chrY	CAT	exon	6135412	6135662	.	-	.	source_transcript=ENST00000849214.1;source_transcript_name=TTTY8-203;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849214.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;transcript_id=HG00140_ch_T0000438;gene_id=HG00140_ch_G0000102;Parent=HG00140_ch_T0000438;transcript_name=HG00140_ch_T0000438;gene_name=TTTY8;ID=exon:HG00140_ch_T0000438:0;Name=TTTY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6135663	6145189	.	-	.	source_transcript=ENST00000849214.1;source_transcript_name=TTTY8-203;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849214.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;transcript_id=HG00140_ch_T0000438;gene_id=HG00140_ch_G0000102;Parent=HG00140_ch_T0000438;transcript_name=HG00140_ch_T0000438;gene_name=TTTY8;ID=intron:HG00140_ch_T0000438:0;Name=TTTY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6145190	6145394	.	-	.	source_transcript=ENST00000849214.1;source_transcript_name=TTTY8-203;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849214.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;transcript_id=HG00140_ch_T0000438;gene_id=HG00140_ch_G0000102;Parent=HG00140_ch_T0000438;transcript_name=HG00140_ch_T0000438;gene_name=TTTY8;ID=exon:HG00140_ch_T0000438:1;Name=TTTY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6145395	6145871	.	-	.	source_transcript=ENST00000849214.1;source_transcript_name=TTTY8-203;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849214.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;transcript_id=HG00140_ch_T0000438;gene_id=HG00140_ch_G0000102;Parent=HG00140_ch_T0000438;transcript_name=HG00140_ch_T0000438;gene_name=TTTY8;ID=intron:HG00140_ch_T0000438:1;Name=TTTY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6145872	6146064	.	-	.	source_transcript=ENST00000849214.1;source_transcript_name=TTTY8-203;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849214.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849214.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;transcript_id=HG00140_ch_T0000438;gene_id=HG00140_ch_G0000102;Parent=HG00140_ch_T0000438;transcript_name=HG00140_ch_T0000438;gene_name=TTTY8;ID=exon:HG00140_ch_T0000438:2;Name=TTTY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6135440	6146052	1000	-	.	source_transcript=ENST00000849215.1;source_transcript_name=TTTY8-204;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849215.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;transcript_id=HG00140_ch_T0000439;gene_id=HG00140_ch_G0000102;Parent=HG00140_ch_G0000102;transcript_name=HG00140_ch_T0000439;gene_name=TTTY8;ID=HG00140_ch_T0000439;Name=TTTY8
HG00140_chrY	CAT	exon	6135440	6135662	.	-	.	source_transcript=ENST00000849215.1;source_transcript_name=TTTY8-204;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;transcript_id=HG00140_ch_T0000439;gene_id=HG00140_ch_G0000102;Parent=HG00140_ch_T0000439;transcript_name=HG00140_ch_T0000439;gene_name=TTTY8;ID=exon:HG00140_ch_T0000439:0;Name=TTTY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6135663	6145189	.	-	.	source_transcript=ENST00000849215.1;source_transcript_name=TTTY8-204;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;transcript_id=HG00140_ch_T0000439;gene_id=HG00140_ch_G0000102;Parent=HG00140_ch_T0000439;transcript_name=HG00140_ch_T0000439;gene_name=TTTY8;ID=intron:HG00140_ch_T0000439:0;Name=TTTY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6145190	6145394	.	-	.	source_transcript=ENST00000849215.1;source_transcript_name=TTTY8-204;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;transcript_id=HG00140_ch_T0000439;gene_id=HG00140_ch_G0000102;Parent=HG00140_ch_T0000439;transcript_name=HG00140_ch_T0000439;gene_name=TTTY8;ID=exon:HG00140_ch_T0000439:1;Name=TTTY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6145395	6146028	.	-	.	source_transcript=ENST00000849215.1;source_transcript_name=TTTY8-204;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;transcript_id=HG00140_ch_T0000439;gene_id=HG00140_ch_G0000102;Parent=HG00140_ch_T0000439;transcript_name=HG00140_ch_T0000439;gene_name=TTTY8;ID=intron:HG00140_ch_T0000439:1;Name=TTTY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6146029	6146052	.	-	.	source_transcript=ENST00000849215.1;source_transcript_name=TTTY8-204;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849215.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849215.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;transcript_id=HG00140_ch_T0000439;gene_id=HG00140_ch_G0000102;Parent=HG00140_ch_T0000439;transcript_name=HG00140_ch_T0000439;gene_name=TTTY8;ID=exon:HG00140_ch_T0000439:2;Name=TTTY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6143150	6146032	1000	-	.	source_transcript=ENST00000426035.2;source_transcript_name=TTTY8-202;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426035.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426035.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;transcript_id=HG00140_ch_T0000440;gene_id=HG00140_ch_G0000102;Parent=HG00140_ch_G0000102;transcript_name=HG00140_ch_T0000440;gene_name=TTTY8;ID=HG00140_ch_T0000440;Name=TTTY8
HG00140_chrY	CAT	exon	6143150	6143326	.	-	.	source_transcript=ENST00000426035.2;source_transcript_name=TTTY8-202;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426035.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426035.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;transcript_id=HG00140_ch_T0000440;gene_id=HG00140_ch_G0000102;Parent=HG00140_ch_T0000440;transcript_name=HG00140_ch_T0000440;gene_name=TTTY8;ID=exon:HG00140_ch_T0000440:0;Name=TTTY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6143327	6145189	.	-	.	source_transcript=ENST00000426035.2;source_transcript_name=TTTY8-202;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426035.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426035.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;transcript_id=HG00140_ch_T0000440;gene_id=HG00140_ch_G0000102;Parent=HG00140_ch_T0000440;transcript_name=HG00140_ch_T0000440;gene_name=TTTY8;ID=intron:HG00140_ch_T0000440:0;Name=TTTY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6145190	6145394	.	-	.	source_transcript=ENST00000426035.2;source_transcript_name=TTTY8-202;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426035.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426035.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;transcript_id=HG00140_ch_T0000440;gene_id=HG00140_ch_G0000102;Parent=HG00140_ch_T0000440;transcript_name=HG00140_ch_T0000440;gene_name=TTTY8;ID=exon:HG00140_ch_T0000440:1;Name=TTTY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6145395	6145871	.	-	.	source_transcript=ENST00000426035.2;source_transcript_name=TTTY8-202;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426035.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426035.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;transcript_id=HG00140_ch_T0000440;gene_id=HG00140_ch_G0000102;Parent=HG00140_ch_T0000440;transcript_name=HG00140_ch_T0000440;gene_name=TTTY8;ID=intron:HG00140_ch_T0000440:1;Name=TTTY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6145872	6146032	.	-	.	source_transcript=ENST00000426035.2;source_transcript_name=TTTY8-202;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426035.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426035.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;transcript_id=HG00140_ch_T0000440;gene_id=HG00140_ch_G0000102;Parent=HG00140_ch_T0000440;transcript_name=HG00140_ch_T0000440;gene_name=TTTY8;ID=exon:HG00140_ch_T0000440:2;Name=TTTY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6143162	6146007	1000	-	.	source_transcript=ENST00000849216.1;source_transcript_name=TTTY8-205;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849216.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;transcript_id=HG00140_ch_T0000441;gene_id=HG00140_ch_G0000102;Parent=HG00140_ch_G0000102;transcript_name=HG00140_ch_T0000441;gene_name=TTTY8;ID=HG00140_ch_T0000441;Name=TTTY8
HG00140_chrY	CAT	exon	6143162	6143326	.	-	.	source_transcript=ENST00000849216.1;source_transcript_name=TTTY8-205;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849216.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;transcript_id=HG00140_ch_T0000441;gene_id=HG00140_ch_G0000102;Parent=HG00140_ch_T0000441;transcript_name=HG00140_ch_T0000441;gene_name=TTTY8;ID=exon:HG00140_ch_T0000441:0;Name=TTTY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6143327	6145189	.	-	.	source_transcript=ENST00000849216.1;source_transcript_name=TTTY8-205;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849216.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;transcript_id=HG00140_ch_T0000441;gene_id=HG00140_ch_G0000102;Parent=HG00140_ch_T0000441;transcript_name=HG00140_ch_T0000441;gene_name=TTTY8;ID=intron:HG00140_ch_T0000441:0;Name=TTTY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6145190	6145390	.	-	.	source_transcript=ENST00000849216.1;source_transcript_name=TTTY8-205;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849216.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;transcript_id=HG00140_ch_T0000441;gene_id=HG00140_ch_G0000102;Parent=HG00140_ch_T0000441;transcript_name=HG00140_ch_T0000441;gene_name=TTTY8;ID=exon:HG00140_ch_T0000441:1;Name=TTTY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6145391	6145871	.	-	.	source_transcript=ENST00000849216.1;source_transcript_name=TTTY8-205;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849216.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;transcript_id=HG00140_ch_T0000441;gene_id=HG00140_ch_G0000102;Parent=HG00140_ch_T0000441;transcript_name=HG00140_ch_T0000441;gene_name=TTTY8;ID=intron:HG00140_ch_T0000441:1;Name=TTTY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6145872	6146007	.	-	.	source_transcript=ENST00000849216.1;source_transcript_name=TTTY8-205;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849216.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;transcript_id=HG00140_ch_T0000441;gene_id=HG00140_ch_G0000102;Parent=HG00140_ch_T0000441;transcript_name=HG00140_ch_T0000441;gene_name=TTTY8;ID=exon:HG00140_ch_T0000441:2;Name=TTTY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6143408	6146038	1000	-	.	source_transcript=ENST00000329684.8;source_transcript_name=TTTY8-201;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000329684.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000329684.8;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;transcript_id=HG00140_ch_T0000442;gene_id=HG00140_ch_G0000102;Parent=HG00140_ch_G0000102;transcript_name=HG00140_ch_T0000442;gene_name=TTTY8;ID=HG00140_ch_T0000442;Name=TTTY8
HG00140_chrY	CAT	exon	6143408	6143597	.	-	.	source_transcript=ENST00000329684.8;source_transcript_name=TTTY8-201;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000329684.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000329684.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;transcript_id=HG00140_ch_T0000442;gene_id=HG00140_ch_G0000102;Parent=HG00140_ch_T0000442;transcript_name=HG00140_ch_T0000442;gene_name=TTTY8;ID=exon:HG00140_ch_T0000442:0;Name=TTTY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6143598	6145189	.	-	.	source_transcript=ENST00000329684.8;source_transcript_name=TTTY8-201;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000329684.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000329684.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;transcript_id=HG00140_ch_T0000442;gene_id=HG00140_ch_G0000102;Parent=HG00140_ch_T0000442;transcript_name=HG00140_ch_T0000442;gene_name=TTTY8;ID=intron:HG00140_ch_T0000442:0;Name=TTTY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6145190	6145394	.	-	.	source_transcript=ENST00000329684.8;source_transcript_name=TTTY8-201;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000329684.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000329684.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;transcript_id=HG00140_ch_T0000442;gene_id=HG00140_ch_G0000102;Parent=HG00140_ch_T0000442;transcript_name=HG00140_ch_T0000442;gene_name=TTTY8;ID=exon:HG00140_ch_T0000442:1;Name=TTTY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6145395	6145871	.	-	.	source_transcript=ENST00000329684.8;source_transcript_name=TTTY8-201;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000329684.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000329684.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;transcript_id=HG00140_ch_T0000442;gene_id=HG00140_ch_G0000102;Parent=HG00140_ch_T0000442;transcript_name=HG00140_ch_T0000442;gene_name=TTTY8;ID=intron:HG00140_ch_T0000442:1;Name=TTTY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6145872	6146038	.	-	.	source_transcript=ENST00000329684.8;source_transcript_name=TTTY8-201;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000329684.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000329684.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;transcript_id=HG00140_ch_T0000442;gene_id=HG00140_ch_G0000102;Parent=HG00140_ch_T0000442;transcript_name=HG00140_ch_T0000442;gene_name=TTTY8;ID=exon:HG00140_ch_T0000442:2;Name=TTTY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6143408	6146068	1000	-	.	source_transcript=ENST00000849217.1;source_transcript_name=TTTY8-206;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849217.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;transcript_id=HG00140_ch_T0000443;gene_id=HG00140_ch_G0000102;Parent=HG00140_ch_G0000102;transcript_name=HG00140_ch_T0000443;gene_name=TTTY8;ID=HG00140_ch_T0000443;Name=TTTY8
HG00140_chrY	CAT	exon	6143408	6143597	.	-	.	source_transcript=ENST00000849217.1;source_transcript_name=TTTY8-206;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;transcript_id=HG00140_ch_T0000443;gene_id=HG00140_ch_G0000102;Parent=HG00140_ch_T0000443;transcript_name=HG00140_ch_T0000443;gene_name=TTTY8;ID=exon:HG00140_ch_T0000443:0;Name=TTTY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6143598	6145189	.	-	.	source_transcript=ENST00000849217.1;source_transcript_name=TTTY8-206;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;transcript_id=HG00140_ch_T0000443;gene_id=HG00140_ch_G0000102;Parent=HG00140_ch_T0000443;transcript_name=HG00140_ch_T0000443;gene_name=TTTY8;ID=intron:HG00140_ch_T0000443:0;Name=TTTY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6145190	6145394	.	-	.	source_transcript=ENST00000849217.1;source_transcript_name=TTTY8-206;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;transcript_id=HG00140_ch_T0000443;gene_id=HG00140_ch_G0000102;Parent=HG00140_ch_T0000443;transcript_name=HG00140_ch_T0000443;gene_name=TTTY8;ID=exon:HG00140_ch_T0000443:1;Name=TTTY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6145395	6146028	.	-	.	source_transcript=ENST00000849217.1;source_transcript_name=TTTY8-206;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;transcript_id=HG00140_ch_T0000443;gene_id=HG00140_ch_G0000102;Parent=HG00140_ch_T0000443;transcript_name=HG00140_ch_T0000443;gene_name=TTTY8;ID=intron:HG00140_ch_T0000443:1;Name=TTTY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6146029	6146068	.	-	.	source_transcript=ENST00000849217.1;source_transcript_name=TTTY8-206;source_gene=ENSG00000183385.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183385.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000849217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000849217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;transcript_id=HG00140_ch_T0000443;gene_id=HG00140_ch_G0000102;Parent=HG00140_ch_T0000443;transcript_name=HG00140_ch_T0000443;gene_name=TTTY8;ID=exon:HG00140_ch_T0000443:2;Name=TTTY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6168097	6171882	.	-	.	source_gene_common_name=ENSG00000232617;source_gene=ENSG00000232617.1;alternative_source_transcripts=ENST00000426129.1;gene_id=HG00140_ch_G0000103;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000232617;gene_sources=liftoff;ID=HG00140_ch_G0000103;Name=ENSG00000232617
HG00140_chrY	CAT	transcript	6168097	6171882	1000	-	.	source_transcript=ENST00000426129.1;source_transcript_name=ENST00000426129;source_gene=ENSG00000232617.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232617.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426129.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000232617;alternative_source_transcripts=ENST00000426129.1;transcript_id=HG00140_ch_T0000444;gene_id=HG00140_ch_G0000103;Parent=HG00140_ch_G0000103;transcript_name=HG00140_ch_T0000444;gene_name=ENSG00000232617;ID=HG00140_ch_T0000444;Name=ENSG00000232617
HG00140_chrY	CAT	exon	6168097	6168184	.	-	.	source_transcript=ENST00000426129.1;source_transcript_name=ENST00000426129;source_gene=ENSG00000232617.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232617.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000232617;alternative_source_transcripts=ENST00000426129.1;transcript_id=HG00140_ch_T0000444;gene_id=HG00140_ch_G0000103;Parent=HG00140_ch_T0000444;transcript_name=HG00140_ch_T0000444;gene_name=ENSG00000232617;ID=exon:HG00140_ch_T0000444:0;Name=ENSG00000232617;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6168185	6171709	.	-	.	source_transcript=ENST00000426129.1;source_transcript_name=ENST00000426129;source_gene=ENSG00000232617.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232617.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000232617;alternative_source_transcripts=ENST00000426129.1;transcript_id=HG00140_ch_T0000444;gene_id=HG00140_ch_G0000103;Parent=HG00140_ch_T0000444;transcript_name=HG00140_ch_T0000444;gene_name=ENSG00000232617;ID=intron:HG00140_ch_T0000444:0;Name=ENSG00000232617;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6171710	6171882	.	-	.	source_transcript=ENST00000426129.1;source_transcript_name=ENST00000426129;source_gene=ENSG00000232617.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232617.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426129.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000232617;alternative_source_transcripts=ENST00000426129.1;transcript_id=HG00140_ch_T0000444;gene_id=HG00140_ch_G0000103;Parent=HG00140_ch_T0000444;transcript_name=HG00140_ch_T0000444;gene_name=ENSG00000232617;ID=exon:HG00140_ch_T0000444:1;Name=ENSG00000232617;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6196403	6196870	.	+	.	source_gene_common_name=TSPY16P;source_gene=ENSG00000226223.1;alternative_source_transcripts=ENST00000449843.1;gene_id=HG00140_ch_G0000104;gene_biotype=unprocessed_pseudogene;gene_name=TSPY16P;gene_sources=liftoff;ID=HG00140_ch_G0000104;Name=TSPY16P
HG00140_chrY	CAT	transcript	6196403	6196870	1000	+	.	source_transcript=ENST00000449843.1;source_transcript_name=TSPY16P-201;source_gene=ENSG00000226223.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226223.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449843.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY16P;alternative_source_transcripts=ENST00000449843.1;transcript_id=HG00140_ch_T0000445;gene_id=HG00140_ch_G0000104;Parent=HG00140_ch_G0000104;transcript_name=HG00140_ch_T0000445;gene_name=TSPY16P;ID=HG00140_ch_T0000445;Name=TSPY16P
HG00140_chrY	CAT	exon	6196403	6196870	.	+	.	source_transcript=ENST00000449843.1;source_transcript_name=TSPY16P-201;source_gene=ENSG00000226223.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226223.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY16P;alternative_source_transcripts=ENST00000449843.1;transcript_id=HG00140_ch_T0000445;gene_id=HG00140_ch_G0000104;Parent=HG00140_ch_T0000445;transcript_name=HG00140_ch_T0000445;gene_name=TSPY16P;ID=exon:HG00140_ch_T0000445:0;Name=TSPY16P;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6204773	6227163	.	+	.	source_gene_common_name=ENSG00000309329;source_gene=ENSG00000309329.1;gene_id=HG00140_ch_G0000105;gene_biotype=lncRNA;gene_name=ENSG00000309329;gene_sources=liftoff;ID=HG00140_ch_G0000105;Name=ENSG00000309329
HG00140_chrY	CAT	transcript	6204773	6226566	1000	+	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000446;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_G0000105;transcript_name=HG00140_ch_T0000446;gene_name=ENSG00000309329;ID=HG00140_ch_T0000446;Name=ENSG00000309329
HG00140_chrY	CAT	exon	6204773	6204810	.	+	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000446;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000446;transcript_name=HG00140_ch_T0000446;gene_name=ENSG00000309329;ID=exon:HG00140_ch_T0000446:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6204811	6216402	.	+	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000446;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000446;transcript_name=HG00140_ch_T0000446;gene_name=ENSG00000309329;ID=intron:HG00140_ch_T0000446:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6216403	6216492	.	+	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000446;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000446;transcript_name=HG00140_ch_T0000446;gene_name=ENSG00000309329;ID=exon:HG00140_ch_T0000446:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6216493	6221916	.	+	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000446;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000446;transcript_name=HG00140_ch_T0000446;gene_name=ENSG00000309329;ID=intron:HG00140_ch_T0000446:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6221917	6222029	.	+	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000446;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000446;transcript_name=HG00140_ch_T0000446;gene_name=ENSG00000309329;ID=exon:HG00140_ch_T0000446:2;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6222030	6222235	.	+	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000446;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000446;transcript_name=HG00140_ch_T0000446;gene_name=ENSG00000309329;ID=intron:HG00140_ch_T0000446:2;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6222236	6222337	.	+	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000446;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000446;transcript_name=HG00140_ch_T0000446;gene_name=ENSG00000309329;ID=exon:HG00140_ch_T0000446:3;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6222338	6224584	.	+	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000446;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000446;transcript_name=HG00140_ch_T0000446;gene_name=ENSG00000309329;ID=intron:HG00140_ch_T0000446:3;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6224585	6224698	.	+	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000446;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000446;transcript_name=HG00140_ch_T0000446;gene_name=ENSG00000309329;ID=exon:HG00140_ch_T0000446:4;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6224699	6226247	.	+	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000446;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000446;transcript_name=HG00140_ch_T0000446;gene_name=ENSG00000309329;ID=intron:HG00140_ch_T0000446:4;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6226248	6226566	.	+	.	source_transcript=ENST00000840320.1;source_transcript_name=ENST00000840320;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840320.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000446;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000446;transcript_name=HG00140_ch_T0000446;gene_name=ENSG00000309329;ID=exon:HG00140_ch_T0000446:5;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6213803	6227160	1000	+	.	source_transcript=ENST00000840323.1;source_transcript_name=ENST00000840323;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840323.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840323.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000448;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_G0000105;transcript_name=HG00140_ch_T0000448;gene_name=ENSG00000309329;ID=HG00140_ch_T0000448;Name=ENSG00000309329
HG00140_chrY	CAT	exon	6213803	6213964	.	+	.	source_transcript=ENST00000840323.1;source_transcript_name=ENST00000840323;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840323.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840323.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000448;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000448;transcript_name=HG00140_ch_T0000448;gene_name=ENSG00000309329;ID=exon:HG00140_ch_T0000448:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6213965	6216402	.	+	.	source_transcript=ENST00000840323.1;source_transcript_name=ENST00000840323;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840323.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840323.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000448;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000448;transcript_name=HG00140_ch_T0000448;gene_name=ENSG00000309329;ID=intron:HG00140_ch_T0000448:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6216403	6216492	.	+	.	source_transcript=ENST00000840323.1;source_transcript_name=ENST00000840323;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840323.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840323.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000448;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000448;transcript_name=HG00140_ch_T0000448;gene_name=ENSG00000309329;ID=exon:HG00140_ch_T0000448:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6216493	6222235	.	+	.	source_transcript=ENST00000840323.1;source_transcript_name=ENST00000840323;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840323.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840323.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000448;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000448;transcript_name=HG00140_ch_T0000448;gene_name=ENSG00000309329;ID=intron:HG00140_ch_T0000448:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6222236	6222337	.	+	.	source_transcript=ENST00000840323.1;source_transcript_name=ENST00000840323;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840323.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840323.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000448;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000448;transcript_name=HG00140_ch_T0000448;gene_name=ENSG00000309329;ID=exon:HG00140_ch_T0000448:2;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6222338	6226247	.	+	.	source_transcript=ENST00000840323.1;source_transcript_name=ENST00000840323;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840323.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840323.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000448;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000448;transcript_name=HG00140_ch_T0000448;gene_name=ENSG00000309329;ID=intron:HG00140_ch_T0000448:2;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6226248	6227160	.	+	.	source_transcript=ENST00000840323.1;source_transcript_name=ENST00000840323;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840323.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840323.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000448;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000448;transcript_name=HG00140_ch_T0000448;gene_name=ENSG00000309329;ID=exon:HG00140_ch_T0000448:3;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6213803	6227161	1000	+	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000449;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_G0000105;transcript_name=HG00140_ch_T0000449;gene_name=ENSG00000309329;ID=HG00140_ch_T0000449;Name=ENSG00000309329
HG00140_chrY	CAT	exon	6213803	6213964	.	+	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000449;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000449;transcript_name=HG00140_ch_T0000449;gene_name=ENSG00000309329;ID=exon:HG00140_ch_T0000449:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6213965	6216402	.	+	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000449;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000449;transcript_name=HG00140_ch_T0000449;gene_name=ENSG00000309329;ID=intron:HG00140_ch_T0000449:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6216403	6216492	.	+	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000449;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000449;transcript_name=HG00140_ch_T0000449;gene_name=ENSG00000309329;ID=exon:HG00140_ch_T0000449:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6216493	6221925	.	+	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000449;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000449;transcript_name=HG00140_ch_T0000449;gene_name=ENSG00000309329;ID=intron:HG00140_ch_T0000449:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6221926	6222029	.	+	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000449;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000449;transcript_name=HG00140_ch_T0000449;gene_name=ENSG00000309329;ID=exon:HG00140_ch_T0000449:2;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6222030	6222235	.	+	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000449;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000449;transcript_name=HG00140_ch_T0000449;gene_name=ENSG00000309329;ID=intron:HG00140_ch_T0000449:2;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6222236	6222337	.	+	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000449;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000449;transcript_name=HG00140_ch_T0000449;gene_name=ENSG00000309329;ID=exon:HG00140_ch_T0000449:3;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6222338	6224584	.	+	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000449;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000449;transcript_name=HG00140_ch_T0000449;gene_name=ENSG00000309329;ID=intron:HG00140_ch_T0000449:3;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6224585	6224698	.	+	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000449;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000449;transcript_name=HG00140_ch_T0000449;gene_name=ENSG00000309329;ID=exon:HG00140_ch_T0000449:4;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6224699	6226247	.	+	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000449;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000449;transcript_name=HG00140_ch_T0000449;gene_name=ENSG00000309329;ID=intron:HG00140_ch_T0000449:4;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6226248	6227161	.	+	.	source_transcript=ENST00000840322.1;source_transcript_name=ENST00000840322;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000449;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000449;transcript_name=HG00140_ch_T0000449;gene_name=ENSG00000309329;ID=exon:HG00140_ch_T0000449:5;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6213803	6227163	1000	+	.	source_transcript=ENST00000840321.1;source_transcript_name=ENST00000840321;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840321.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840321.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000450;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_G0000105;transcript_name=HG00140_ch_T0000450;gene_name=ENSG00000309329;ID=HG00140_ch_T0000450;Name=ENSG00000309329
HG00140_chrY	CAT	exon	6213803	6213964	.	+	.	source_transcript=ENST00000840321.1;source_transcript_name=ENST00000840321;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840321.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840321.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000450;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000450;transcript_name=HG00140_ch_T0000450;gene_name=ENSG00000309329;ID=exon:HG00140_ch_T0000450:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6213965	6216402	.	+	.	source_transcript=ENST00000840321.1;source_transcript_name=ENST00000840321;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840321.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840321.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000450;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000450;transcript_name=HG00140_ch_T0000450;gene_name=ENSG00000309329;ID=intron:HG00140_ch_T0000450:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6216403	6216492	.	+	.	source_transcript=ENST00000840321.1;source_transcript_name=ENST00000840321;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840321.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840321.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000450;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000450;transcript_name=HG00140_ch_T0000450;gene_name=ENSG00000309329;ID=exon:HG00140_ch_T0000450:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6216493	6221925	.	+	.	source_transcript=ENST00000840321.1;source_transcript_name=ENST00000840321;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840321.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840321.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000450;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000450;transcript_name=HG00140_ch_T0000450;gene_name=ENSG00000309329;ID=intron:HG00140_ch_T0000450:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6221926	6222029	.	+	.	source_transcript=ENST00000840321.1;source_transcript_name=ENST00000840321;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840321.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840321.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000450;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000450;transcript_name=HG00140_ch_T0000450;gene_name=ENSG00000309329;ID=exon:HG00140_ch_T0000450:2;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6222030	6222235	.	+	.	source_transcript=ENST00000840321.1;source_transcript_name=ENST00000840321;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840321.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840321.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000450;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000450;transcript_name=HG00140_ch_T0000450;gene_name=ENSG00000309329;ID=intron:HG00140_ch_T0000450:2;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6222236	6222337	.	+	.	source_transcript=ENST00000840321.1;source_transcript_name=ENST00000840321;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840321.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840321.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000450;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000450;transcript_name=HG00140_ch_T0000450;gene_name=ENSG00000309329;ID=exon:HG00140_ch_T0000450:3;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6222338	6226247	.	+	.	source_transcript=ENST00000840321.1;source_transcript_name=ENST00000840321;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840321.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840321.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000450;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000450;transcript_name=HG00140_ch_T0000450;gene_name=ENSG00000309329;ID=intron:HG00140_ch_T0000450:3;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6226248	6227163	.	+	.	source_transcript=ENST00000840321.1;source_transcript_name=ENST00000840321;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840321.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840321.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000450;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000450;transcript_name=HG00140_ch_T0000450;gene_name=ENSG00000309329;ID=exon:HG00140_ch_T0000450:4;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6213803	6226828	1000	+	.	source_transcript=ENST00000840324.1;source_transcript_name=ENST00000840324;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840324.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840324.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000451;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_G0000105;transcript_name=HG00140_ch_T0000451;gene_name=ENSG00000309329;ID=HG00140_ch_T0000451;Name=ENSG00000309329
HG00140_chrY	CAT	exon	6213803	6213964	.	+	.	source_transcript=ENST00000840324.1;source_transcript_name=ENST00000840324;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840324.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840324.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000451;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000451;transcript_name=HG00140_ch_T0000451;gene_name=ENSG00000309329;ID=exon:HG00140_ch_T0000451:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6213965	6216402	.	+	.	source_transcript=ENST00000840324.1;source_transcript_name=ENST00000840324;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840324.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840324.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000451;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000451;transcript_name=HG00140_ch_T0000451;gene_name=ENSG00000309329;ID=intron:HG00140_ch_T0000451:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6216403	6216492	.	+	.	source_transcript=ENST00000840324.1;source_transcript_name=ENST00000840324;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840324.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840324.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000451;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000451;transcript_name=HG00140_ch_T0000451;gene_name=ENSG00000309329;ID=exon:HG00140_ch_T0000451:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6216493	6222235	.	+	.	source_transcript=ENST00000840324.1;source_transcript_name=ENST00000840324;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840324.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840324.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000451;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000451;transcript_name=HG00140_ch_T0000451;gene_name=ENSG00000309329;ID=intron:HG00140_ch_T0000451:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6222236	6222337	.	+	.	source_transcript=ENST00000840324.1;source_transcript_name=ENST00000840324;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840324.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840324.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000451;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000451;transcript_name=HG00140_ch_T0000451;gene_name=ENSG00000309329;ID=exon:HG00140_ch_T0000451:2;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6222338	6224584	.	+	.	source_transcript=ENST00000840324.1;source_transcript_name=ENST00000840324;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840324.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840324.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000451;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000451;transcript_name=HG00140_ch_T0000451;gene_name=ENSG00000309329;ID=intron:HG00140_ch_T0000451:2;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6224585	6224698	.	+	.	source_transcript=ENST00000840324.1;source_transcript_name=ENST00000840324;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840324.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840324.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000451;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000451;transcript_name=HG00140_ch_T0000451;gene_name=ENSG00000309329;ID=exon:HG00140_ch_T0000451:3;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6224699	6226247	.	+	.	source_transcript=ENST00000840324.1;source_transcript_name=ENST00000840324;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840324.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840324.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000451;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000451;transcript_name=HG00140_ch_T0000451;gene_name=ENSG00000309329;ID=intron:HG00140_ch_T0000451:3;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6226248	6226828	.	+	.	source_transcript=ENST00000840324.1;source_transcript_name=ENST00000840324;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840324.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840324.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000451;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000451;transcript_name=HG00140_ch_T0000451;gene_name=ENSG00000309329;ID=exon:HG00140_ch_T0000451:4;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6213809	6226814	1000	+	.	source_transcript=ENST00000840327.1;source_transcript_name=ENST00000840327;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840327.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000452;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_G0000105;transcript_name=HG00140_ch_T0000452;gene_name=ENSG00000309329;ID=HG00140_ch_T0000452;Name=ENSG00000309329
HG00140_chrY	CAT	exon	6213809	6213964	.	+	.	source_transcript=ENST00000840327.1;source_transcript_name=ENST00000840327;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000452;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000452;transcript_name=HG00140_ch_T0000452;gene_name=ENSG00000309329;ID=exon:HG00140_ch_T0000452:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6213965	6216402	.	+	.	source_transcript=ENST00000840327.1;source_transcript_name=ENST00000840327;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000452;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000452;transcript_name=HG00140_ch_T0000452;gene_name=ENSG00000309329;ID=intron:HG00140_ch_T0000452:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6216403	6216492	.	+	.	source_transcript=ENST00000840327.1;source_transcript_name=ENST00000840327;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000452;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000452;transcript_name=HG00140_ch_T0000452;gene_name=ENSG00000309329;ID=exon:HG00140_ch_T0000452:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6216493	6221916	.	+	.	source_transcript=ENST00000840327.1;source_transcript_name=ENST00000840327;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000452;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000452;transcript_name=HG00140_ch_T0000452;gene_name=ENSG00000309329;ID=intron:HG00140_ch_T0000452:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6221917	6222029	.	+	.	source_transcript=ENST00000840327.1;source_transcript_name=ENST00000840327;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000452;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000452;transcript_name=HG00140_ch_T0000452;gene_name=ENSG00000309329;ID=exon:HG00140_ch_T0000452:2;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6222030	6222235	.	+	.	source_transcript=ENST00000840327.1;source_transcript_name=ENST00000840327;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000452;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000452;transcript_name=HG00140_ch_T0000452;gene_name=ENSG00000309329;ID=intron:HG00140_ch_T0000452:2;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6222236	6222337	.	+	.	source_transcript=ENST00000840327.1;source_transcript_name=ENST00000840327;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000452;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000452;transcript_name=HG00140_ch_T0000452;gene_name=ENSG00000309329;ID=exon:HG00140_ch_T0000452:3;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6222338	6226247	.	+	.	source_transcript=ENST00000840327.1;source_transcript_name=ENST00000840327;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000452;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000452;transcript_name=HG00140_ch_T0000452;gene_name=ENSG00000309329;ID=intron:HG00140_ch_T0000452:3;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6226248	6226814	.	+	.	source_transcript=ENST00000840327.1;source_transcript_name=ENST00000840327;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000452;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000452;transcript_name=HG00140_ch_T0000452;gene_name=ENSG00000309329;ID=exon:HG00140_ch_T0000452:4;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6213814	6226821	1000	+	.	source_transcript=ENST00000840326.1;source_transcript_name=ENST00000840326;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840326.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000453;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_G0000105;transcript_name=HG00140_ch_T0000453;gene_name=ENSG00000309329;ID=HG00140_ch_T0000453;Name=ENSG00000309329
HG00140_chrY	CAT	exon	6213814	6213964	.	+	.	source_transcript=ENST00000840326.1;source_transcript_name=ENST00000840326;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000453;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000453;transcript_name=HG00140_ch_T0000453;gene_name=ENSG00000309329;ID=exon:HG00140_ch_T0000453:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6213965	6216402	.	+	.	source_transcript=ENST00000840326.1;source_transcript_name=ENST00000840326;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000453;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000453;transcript_name=HG00140_ch_T0000453;gene_name=ENSG00000309329;ID=intron:HG00140_ch_T0000453:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6216403	6216492	.	+	.	source_transcript=ENST00000840326.1;source_transcript_name=ENST00000840326;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000453;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000453;transcript_name=HG00140_ch_T0000453;gene_name=ENSG00000309329;ID=exon:HG00140_ch_T0000453:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6216493	6226247	.	+	.	source_transcript=ENST00000840326.1;source_transcript_name=ENST00000840326;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000453;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000453;transcript_name=HG00140_ch_T0000453;gene_name=ENSG00000309329;ID=intron:HG00140_ch_T0000453:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6226248	6226821	.	+	.	source_transcript=ENST00000840326.1;source_transcript_name=ENST00000840326;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000453;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000453;transcript_name=HG00140_ch_T0000453;gene_name=ENSG00000309329;ID=exon:HG00140_ch_T0000453:2;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6213819	6217239	1000	+	.	source_transcript=ENST00000840328.1;source_transcript_name=ENST00000840328;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840328.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000454;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_G0000105;transcript_name=HG00140_ch_T0000454;gene_name=ENSG00000309329;ID=HG00140_ch_T0000454;Name=ENSG00000309329
HG00140_chrY	CAT	exon	6213819	6213964	.	+	.	source_transcript=ENST00000840328.1;source_transcript_name=ENST00000840328;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000454;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000454;transcript_name=HG00140_ch_T0000454;gene_name=ENSG00000309329;ID=exon:HG00140_ch_T0000454:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6213965	6216402	.	+	.	source_transcript=ENST00000840328.1;source_transcript_name=ENST00000840328;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000454;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000454;transcript_name=HG00140_ch_T0000454;gene_name=ENSG00000309329;ID=intron:HG00140_ch_T0000454:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6216403	6216492	.	+	.	source_transcript=ENST00000840328.1;source_transcript_name=ENST00000840328;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000454;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000454;transcript_name=HG00140_ch_T0000454;gene_name=ENSG00000309329;ID=exon:HG00140_ch_T0000454:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6216493	6216722	.	+	.	source_transcript=ENST00000840328.1;source_transcript_name=ENST00000840328;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000454;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000454;transcript_name=HG00140_ch_T0000454;gene_name=ENSG00000309329;ID=intron:HG00140_ch_T0000454:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6216723	6217239	.	+	.	source_transcript=ENST00000840328.1;source_transcript_name=ENST00000840328;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000454;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000454;transcript_name=HG00140_ch_T0000454;gene_name=ENSG00000309329;ID=exon:HG00140_ch_T0000454:2;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6213819	6226828	1000	+	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000455;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_G0000105;transcript_name=HG00140_ch_T0000455;gene_name=ENSG00000309329;ID=HG00140_ch_T0000455;Name=ENSG00000309329
HG00140_chrY	CAT	exon	6213819	6213964	.	+	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000455;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000455;transcript_name=HG00140_ch_T0000455;gene_name=ENSG00000309329;ID=exon:HG00140_ch_T0000455:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6213965	6216402	.	+	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000455;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000455;transcript_name=HG00140_ch_T0000455;gene_name=ENSG00000309329;ID=intron:HG00140_ch_T0000455:0;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6216403	6216492	.	+	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000455;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000455;transcript_name=HG00140_ch_T0000455;gene_name=ENSG00000309329;ID=exon:HG00140_ch_T0000455:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6216493	6221916	.	+	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000455;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000455;transcript_name=HG00140_ch_T0000455;gene_name=ENSG00000309329;ID=intron:HG00140_ch_T0000455:1;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6221917	6222029	.	+	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000455;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000455;transcript_name=HG00140_ch_T0000455;gene_name=ENSG00000309329;ID=exon:HG00140_ch_T0000455:2;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6222030	6222235	.	+	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000455;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000455;transcript_name=HG00140_ch_T0000455;gene_name=ENSG00000309329;ID=intron:HG00140_ch_T0000455:2;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6222236	6222337	.	+	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000455;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000455;transcript_name=HG00140_ch_T0000455;gene_name=ENSG00000309329;ID=exon:HG00140_ch_T0000455:3;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6222338	6224584	.	+	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000455;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000455;transcript_name=HG00140_ch_T0000455;gene_name=ENSG00000309329;ID=intron:HG00140_ch_T0000455:3;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6224585	6224698	.	+	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000455;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000455;transcript_name=HG00140_ch_T0000455;gene_name=ENSG00000309329;ID=exon:HG00140_ch_T0000455:4;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6224699	6226247	.	+	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000455;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000455;transcript_name=HG00140_ch_T0000455;gene_name=ENSG00000309329;ID=intron:HG00140_ch_T0000455:4;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6226248	6226828	.	+	.	source_transcript=ENST00000840325.1;source_transcript_name=ENST00000840325;source_gene=ENSG00000309329.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309329.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840325.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840325.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309329;transcript_id=HG00140_ch_T0000455;gene_id=HG00140_ch_G0000105;Parent=HG00140_ch_T0000455;transcript_name=HG00140_ch_T0000455;gene_name=ENSG00000309329;ID=exon:HG00140_ch_T0000455:5;Name=ENSG00000309329;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6210767	6212936	.	-	.	source_gene_common_name=TSPY25P;source_gene=ENSG00000234110.1;alternative_source_transcripts=ENST00000429463.1;gene_id=HG00140_ch_G0000106;gene_biotype=unprocessed_pseudogene;gene_name=TSPY25P;gene_sources=liftoff;ID=HG00140_ch_G0000106;Name=TSPY25P
HG00140_chrY	CAT	transcript	6210767	6212936	1000	-	.	source_transcript=ENST00000429463.1;source_transcript_name=TSPY25P-201;source_gene=ENSG00000234110.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234110.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429463.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY25P;alternative_source_transcripts=ENST00000429463.1;transcript_id=HG00140_ch_T0000447;gene_id=HG00140_ch_G0000106;Parent=HG00140_ch_G0000106;transcript_name=HG00140_ch_T0000447;gene_name=TSPY25P;ID=HG00140_ch_T0000447;Name=TSPY25P
HG00140_chrY	CAT	exon	6210767	6210807	.	-	.	source_transcript=ENST00000429463.1;source_transcript_name=TSPY25P-201;source_gene=ENSG00000234110.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234110.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429463.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY25P;alternative_source_transcripts=ENST00000429463.1;transcript_id=HG00140_ch_T0000447;gene_id=HG00140_ch_G0000106;Parent=HG00140_ch_T0000447;transcript_name=HG00140_ch_T0000447;gene_name=TSPY25P;ID=exon:HG00140_ch_T0000447:0;Name=TSPY25P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6210808	6210917	.	-	.	source_transcript=ENST00000429463.1;source_transcript_name=TSPY25P-201;source_gene=ENSG00000234110.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234110.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429463.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY25P;alternative_source_transcripts=ENST00000429463.1;transcript_id=HG00140_ch_T0000447;gene_id=HG00140_ch_G0000106;Parent=HG00140_ch_T0000447;transcript_name=HG00140_ch_T0000447;gene_name=TSPY25P;ID=intron:HG00140_ch_T0000447:0;Name=TSPY25P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6210918	6211058	.	-	.	source_transcript=ENST00000429463.1;source_transcript_name=TSPY25P-201;source_gene=ENSG00000234110.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234110.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429463.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY25P;alternative_source_transcripts=ENST00000429463.1;transcript_id=HG00140_ch_T0000447;gene_id=HG00140_ch_G0000106;Parent=HG00140_ch_T0000447;transcript_name=HG00140_ch_T0000447;gene_name=TSPY25P;ID=exon:HG00140_ch_T0000447:1;Name=TSPY25P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6211059	6211144	.	-	.	source_transcript=ENST00000429463.1;source_transcript_name=TSPY25P-201;source_gene=ENSG00000234110.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234110.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429463.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY25P;alternative_source_transcripts=ENST00000429463.1;transcript_id=HG00140_ch_T0000447;gene_id=HG00140_ch_G0000106;Parent=HG00140_ch_T0000447;transcript_name=HG00140_ch_T0000447;gene_name=TSPY25P;ID=intron:HG00140_ch_T0000447:1;Name=TSPY25P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6211145	6211257	.	-	.	source_transcript=ENST00000429463.1;source_transcript_name=TSPY25P-201;source_gene=ENSG00000234110.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234110.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429463.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY25P;alternative_source_transcripts=ENST00000429463.1;transcript_id=HG00140_ch_T0000447;gene_id=HG00140_ch_G0000106;Parent=HG00140_ch_T0000447;transcript_name=HG00140_ch_T0000447;gene_name=TSPY25P;ID=exon:HG00140_ch_T0000447:2;Name=TSPY25P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6211258	6211462	.	-	.	source_transcript=ENST00000429463.1;source_transcript_name=TSPY25P-201;source_gene=ENSG00000234110.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234110.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429463.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY25P;alternative_source_transcripts=ENST00000429463.1;transcript_id=HG00140_ch_T0000447;gene_id=HG00140_ch_G0000106;Parent=HG00140_ch_T0000447;transcript_name=HG00140_ch_T0000447;gene_name=TSPY25P;ID=intron:HG00140_ch_T0000447:2;Name=TSPY25P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6211463	6211549	.	-	.	source_transcript=ENST00000429463.1;source_transcript_name=TSPY25P-201;source_gene=ENSG00000234110.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234110.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429463.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY25P;alternative_source_transcripts=ENST00000429463.1;transcript_id=HG00140_ch_T0000447;gene_id=HG00140_ch_G0000106;Parent=HG00140_ch_T0000447;transcript_name=HG00140_ch_T0000447;gene_name=TSPY25P;ID=exon:HG00140_ch_T0000447:3;Name=TSPY25P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6211550	6212573	.	-	.	source_transcript=ENST00000429463.1;source_transcript_name=TSPY25P-201;source_gene=ENSG00000234110.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234110.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429463.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY25P;alternative_source_transcripts=ENST00000429463.1;transcript_id=HG00140_ch_T0000447;gene_id=HG00140_ch_G0000106;Parent=HG00140_ch_T0000447;transcript_name=HG00140_ch_T0000447;gene_name=TSPY25P;ID=intron:HG00140_ch_T0000447:3;Name=TSPY25P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6212574	6212936	.	-	.	source_transcript=ENST00000429463.1;source_transcript_name=TSPY25P-201;source_gene=ENSG00000234110.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234110.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429463.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY25P;alternative_source_transcripts=ENST00000429463.1;transcript_id=HG00140_ch_T0000447;gene_id=HG00140_ch_G0000106;Parent=HG00140_ch_T0000447;transcript_name=HG00140_ch_T0000447;gene_name=TSPY25P;ID=exon:HG00140_ch_T0000447:4;Name=TSPY25P;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6215843	6226548	.	+	.	source_gene_common_name=RBMY3AP;source_gene=ENSG00000231436.1;gene_id=HG00140_ch_G0000107;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY3AP;gene_sources=liftoff;ID=HG00140_ch_G0000107;Name=RBMY3AP
HG00140_chrY	CAT	transcript	6215843	6226548	1000	+	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=HG00140_ch_T0000456;gene_id=HG00140_ch_G0000107;Parent=HG00140_ch_G0000107;transcript_name=HG00140_ch_T0000456;gene_name=RBMY3AP;ID=HG00140_ch_T0000456;Name=RBMY3AP
HG00140_chrY	CAT	exon	6215843	6215951	.	+	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=HG00140_ch_T0000456;gene_id=HG00140_ch_G0000107;Parent=HG00140_ch_T0000456;transcript_name=HG00140_ch_T0000456;gene_name=RBMY3AP;ID=exon:HG00140_ch_T0000456:0;Name=RBMY3AP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6215952	6216388	.	+	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=HG00140_ch_T0000456;gene_id=HG00140_ch_G0000107;Parent=HG00140_ch_T0000456;transcript_name=HG00140_ch_T0000456;gene_name=RBMY3AP;ID=intron:HG00140_ch_T0000456:0;Name=RBMY3AP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6216389	6216492	.	+	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=HG00140_ch_T0000456;gene_id=HG00140_ch_G0000107;Parent=HG00140_ch_T0000456;transcript_name=HG00140_ch_T0000456;gene_name=RBMY3AP;ID=exon:HG00140_ch_T0000456:1;Name=RBMY3AP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6216493	6219791	.	+	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=HG00140_ch_T0000456;gene_id=HG00140_ch_G0000107;Parent=HG00140_ch_T0000456;transcript_name=HG00140_ch_T0000456;gene_name=RBMY3AP;ID=intron:HG00140_ch_T0000456:1;Name=RBMY3AP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6219792	6219966	.	+	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=HG00140_ch_T0000456;gene_id=HG00140_ch_G0000107;Parent=HG00140_ch_T0000456;transcript_name=HG00140_ch_T0000456;gene_name=RBMY3AP;ID=exon:HG00140_ch_T0000456:2;Name=RBMY3AP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6219967	6221882	.	+	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=HG00140_ch_T0000456;gene_id=HG00140_ch_G0000107;Parent=HG00140_ch_T0000456;transcript_name=HG00140_ch_T0000456;gene_name=RBMY3AP;ID=intron:HG00140_ch_T0000456:2;Name=RBMY3AP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6221883	6222029	.	+	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=HG00140_ch_T0000456;gene_id=HG00140_ch_G0000107;Parent=HG00140_ch_T0000456;transcript_name=HG00140_ch_T0000456;gene_name=RBMY3AP;ID=exon:HG00140_ch_T0000456:3;Name=RBMY3AP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6222030	6224584	.	+	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=HG00140_ch_T0000456;gene_id=HG00140_ch_G0000107;Parent=HG00140_ch_T0000456;transcript_name=HG00140_ch_T0000456;gene_name=RBMY3AP;ID=intron:HG00140_ch_T0000456:3;Name=RBMY3AP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6224585	6224698	.	+	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=HG00140_ch_T0000456;gene_id=HG00140_ch_G0000107;Parent=HG00140_ch_T0000456;transcript_name=HG00140_ch_T0000456;gene_name=RBMY3AP;ID=exon:HG00140_ch_T0000456:4;Name=RBMY3AP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6224699	6225555	.	+	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=HG00140_ch_T0000456;gene_id=HG00140_ch_G0000107;Parent=HG00140_ch_T0000456;transcript_name=HG00140_ch_T0000456;gene_name=RBMY3AP;ID=intron:HG00140_ch_T0000456:4;Name=RBMY3AP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6225556	6225666	.	+	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=HG00140_ch_T0000456;gene_id=HG00140_ch_G0000107;Parent=HG00140_ch_T0000456;transcript_name=HG00140_ch_T0000456;gene_name=RBMY3AP;ID=exon:HG00140_ch_T0000456:5;Name=RBMY3AP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6225667	6225751	.	+	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=HG00140_ch_T0000456;gene_id=HG00140_ch_G0000107;Parent=HG00140_ch_T0000456;transcript_name=HG00140_ch_T0000456;gene_name=RBMY3AP;ID=intron:HG00140_ch_T0000456:5;Name=RBMY3AP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6225752	6225835	.	+	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=HG00140_ch_T0000456;gene_id=HG00140_ch_G0000107;Parent=HG00140_ch_T0000456;transcript_name=HG00140_ch_T0000456;gene_name=RBMY3AP;ID=exon:HG00140_ch_T0000456:6;Name=RBMY3AP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6225836	6226247	.	+	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=HG00140_ch_T0000456;gene_id=HG00140_ch_G0000107;Parent=HG00140_ch_T0000456;transcript_name=HG00140_ch_T0000456;gene_name=RBMY3AP;ID=intron:HG00140_ch_T0000456:6;Name=RBMY3AP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6226248	6226548	.	+	.	source_transcript=ENST00000449381.1;source_transcript_name=RBMY3AP-201;source_gene=ENSG00000231436.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000231436.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000449381.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449381.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;transcript_id=HG00140_ch_T0000456;gene_id=HG00140_ch_G0000107;Parent=HG00140_ch_T0000456;transcript_name=HG00140_ch_T0000456;gene_name=RBMY3AP;ID=exon:HG00140_ch_T0000456:7;Name=RBMY3AP;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6286251	6289018	.	-	.	source_gene_common_name=ENSG00000308528;source_gene=ENSG00000308528.1;gene_id=HG00140_ch_G0000108;gene_biotype=lncRNA;gene_name=ENSG00000308528;gene_sources=liftoff;ID=HG00140_ch_G0000108;Name=ENSG00000308528
HG00140_chrY	CAT	transcript	6286251	6289018	1000	-	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=HG00140_ch_T0000457;gene_id=HG00140_ch_G0000108;Parent=HG00140_ch_G0000108;transcript_name=HG00140_ch_T0000457;gene_name=ENSG00000308528;ID=HG00140_ch_T0000457;Name=ENSG00000308528
HG00140_chrY	CAT	exon	6286251	6286495	.	-	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=HG00140_ch_T0000457;gene_id=HG00140_ch_G0000108;Parent=HG00140_ch_T0000457;transcript_name=HG00140_ch_T0000457;gene_name=ENSG00000308528;ID=exon:HG00140_ch_T0000457:0;Name=ENSG00000308528;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6286496	6287191	.	-	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=HG00140_ch_T0000457;gene_id=HG00140_ch_G0000108;Parent=HG00140_ch_T0000457;transcript_name=HG00140_ch_T0000457;gene_name=ENSG00000308528;ID=intron:HG00140_ch_T0000457:0;Name=ENSG00000308528;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6287192	6287273	.	-	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=HG00140_ch_T0000457;gene_id=HG00140_ch_G0000108;Parent=HG00140_ch_T0000457;transcript_name=HG00140_ch_T0000457;gene_name=ENSG00000308528;ID=exon:HG00140_ch_T0000457:1;Name=ENSG00000308528;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6287274	6287379	.	-	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=HG00140_ch_T0000457;gene_id=HG00140_ch_G0000108;Parent=HG00140_ch_T0000457;transcript_name=HG00140_ch_T0000457;gene_name=ENSG00000308528;ID=intron:HG00140_ch_T0000457:1;Name=ENSG00000308528;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6287380	6287524	.	-	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=HG00140_ch_T0000457;gene_id=HG00140_ch_G0000108;Parent=HG00140_ch_T0000457;transcript_name=HG00140_ch_T0000457;gene_name=ENSG00000308528;ID=exon:HG00140_ch_T0000457:2;Name=ENSG00000308528;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6287525	6287625	.	-	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=HG00140_ch_T0000457;gene_id=HG00140_ch_G0000108;Parent=HG00140_ch_T0000457;transcript_name=HG00140_ch_T0000457;gene_name=ENSG00000308528;ID=intron:HG00140_ch_T0000457:2;Name=ENSG00000308528;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6287626	6287737	.	-	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=HG00140_ch_T0000457;gene_id=HG00140_ch_G0000108;Parent=HG00140_ch_T0000457;transcript_name=HG00140_ch_T0000457;gene_name=ENSG00000308528;ID=exon:HG00140_ch_T0000457:3;Name=ENSG00000308528;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6287738	6287865	.	-	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=HG00140_ch_T0000457;gene_id=HG00140_ch_G0000108;Parent=HG00140_ch_T0000457;transcript_name=HG00140_ch_T0000457;gene_name=ENSG00000308528;ID=intron:HG00140_ch_T0000457:3;Name=ENSG00000308528;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6287866	6287943	.	-	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=HG00140_ch_T0000457;gene_id=HG00140_ch_G0000108;Parent=HG00140_ch_T0000457;transcript_name=HG00140_ch_T0000457;gene_name=ENSG00000308528;ID=exon:HG00140_ch_T0000457:4;Name=ENSG00000308528;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6287944	6288550	.	-	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=HG00140_ch_T0000457;gene_id=HG00140_ch_G0000108;Parent=HG00140_ch_T0000457;transcript_name=HG00140_ch_T0000457;gene_name=ENSG00000308528;ID=intron:HG00140_ch_T0000457:4;Name=ENSG00000308528;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6288551	6289018	.	-	.	source_transcript=ENST00000834807.1;source_transcript_name=ENST00000834807;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=HG00140_ch_T0000457;gene_id=HG00140_ch_G0000108;Parent=HG00140_ch_T0000457;transcript_name=HG00140_ch_T0000457;gene_name=ENSG00000308528;ID=exon:HG00140_ch_T0000457:5;Name=ENSG00000308528;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6286258	6287265	1000	-	.	source_transcript=ENST00000834808.1;source_transcript_name=ENST00000834808;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834808.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=HG00140_ch_T0000458;gene_id=HG00140_ch_G0000108;Parent=HG00140_ch_G0000108;transcript_name=HG00140_ch_T0000458;gene_name=ENSG00000308528;ID=HG00140_ch_T0000458;Name=ENSG00000308528
HG00140_chrY	CAT	exon	6286258	6286495	.	-	.	source_transcript=ENST00000834808.1;source_transcript_name=ENST00000834808;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834808.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=HG00140_ch_T0000458;gene_id=HG00140_ch_G0000108;Parent=HG00140_ch_T0000458;transcript_name=HG00140_ch_T0000458;gene_name=ENSG00000308528;ID=exon:HG00140_ch_T0000458:0;Name=ENSG00000308528;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6286496	6287191	.	-	.	source_transcript=ENST00000834808.1;source_transcript_name=ENST00000834808;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834808.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=HG00140_ch_T0000458;gene_id=HG00140_ch_G0000108;Parent=HG00140_ch_T0000458;transcript_name=HG00140_ch_T0000458;gene_name=ENSG00000308528;ID=intron:HG00140_ch_T0000458:0;Name=ENSG00000308528;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6287192	6287265	.	-	.	source_transcript=ENST00000834808.1;source_transcript_name=ENST00000834808;source_gene=ENSG00000308528.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308528.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000834808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000834808.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308528;transcript_id=HG00140_ch_T0000458;gene_id=HG00140_ch_G0000108;Parent=HG00140_ch_T0000458;transcript_name=HG00140_ch_T0000458;gene_name=ENSG00000308528;ID=exon:HG00140_ch_T0000458:1;Name=ENSG00000308528;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6286450	6289022	.	-	.	source_gene_common_name=TSPY15P;source_gene=ENSG00000236786.1;gene_id=HG00140_ch_G0000109;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY15P;gene_sources=liftoff;ID=HG00140_ch_G0000109;Name=TSPY15P
HG00140_chrY	CAT	transcript	6286450	6289022	1000	-	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=HG00140_ch_T0000459;gene_id=HG00140_ch_G0000109;Parent=HG00140_ch_G0000109;transcript_name=HG00140_ch_T0000459;gene_name=TSPY15P;ID=HG00140_ch_T0000459;Name=TSPY15P
HG00140_chrY	CAT	exon	6286450	6286471	.	-	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=HG00140_ch_T0000459;gene_id=HG00140_ch_G0000109;Parent=HG00140_ch_T0000459;transcript_name=HG00140_ch_T0000459;gene_name=TSPY15P;ID=exon:HG00140_ch_T0000459:0;Name=TSPY15P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6286472	6287191	.	-	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=HG00140_ch_T0000459;gene_id=HG00140_ch_G0000109;Parent=HG00140_ch_T0000459;transcript_name=HG00140_ch_T0000459;gene_name=TSPY15P;ID=intron:HG00140_ch_T0000459:0;Name=TSPY15P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6287192	6287284	.	-	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=HG00140_ch_T0000459;gene_id=HG00140_ch_G0000109;Parent=HG00140_ch_T0000459;transcript_name=HG00140_ch_T0000459;gene_name=TSPY15P;ID=exon:HG00140_ch_T0000459:1;Name=TSPY15P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6287285	6287379	.	-	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=HG00140_ch_T0000459;gene_id=HG00140_ch_G0000109;Parent=HG00140_ch_T0000459;transcript_name=HG00140_ch_T0000459;gene_name=TSPY15P;ID=intron:HG00140_ch_T0000459:1;Name=TSPY15P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6287380	6287524	.	-	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=HG00140_ch_T0000459;gene_id=HG00140_ch_G0000109;Parent=HG00140_ch_T0000459;transcript_name=HG00140_ch_T0000459;gene_name=TSPY15P;ID=exon:HG00140_ch_T0000459:2;Name=TSPY15P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6287525	6287625	.	-	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=HG00140_ch_T0000459;gene_id=HG00140_ch_G0000109;Parent=HG00140_ch_T0000459;transcript_name=HG00140_ch_T0000459;gene_name=TSPY15P;ID=intron:HG00140_ch_T0000459:2;Name=TSPY15P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6287626	6287737	.	-	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=HG00140_ch_T0000459;gene_id=HG00140_ch_G0000109;Parent=HG00140_ch_T0000459;transcript_name=HG00140_ch_T0000459;gene_name=TSPY15P;ID=exon:HG00140_ch_T0000459:3;Name=TSPY15P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6287738	6287865	.	-	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=HG00140_ch_T0000459;gene_id=HG00140_ch_G0000109;Parent=HG00140_ch_T0000459;transcript_name=HG00140_ch_T0000459;gene_name=TSPY15P;ID=intron:HG00140_ch_T0000459:3;Name=TSPY15P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6287866	6287943	.	-	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=HG00140_ch_T0000459;gene_id=HG00140_ch_G0000109;Parent=HG00140_ch_T0000459;transcript_name=HG00140_ch_T0000459;gene_name=TSPY15P;ID=exon:HG00140_ch_T0000459:4;Name=TSPY15P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6287944	6288550	.	-	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=HG00140_ch_T0000459;gene_id=HG00140_ch_G0000109;Parent=HG00140_ch_T0000459;transcript_name=HG00140_ch_T0000459;gene_name=TSPY15P;ID=intron:HG00140_ch_T0000459:4;Name=TSPY15P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6288551	6289022	.	-	.	source_transcript=ENST00000457163.1;source_transcript_name=TSPY15P-201;source_gene=ENSG00000236786.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236786.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000457163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY15P;transcript_id=HG00140_ch_T0000459;gene_id=HG00140_ch_G0000109;Parent=HG00140_ch_T0000459;transcript_name=HG00140_ch_T0000459;gene_name=TSPY15P;ID=exon:HG00140_ch_T0000459:5;Name=TSPY15P;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6289983	6292213	.	+	.	source_gene_common_name=FAM197Y1;source_gene=ENSG00000224336.2;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;gene_id=HG00140_ch_G0000110;gene_biotype=unprocessed_pseudogene;gene_name=FAM197Y1;gene_sources=liftoff;ID=HG00140_ch_G0000110;Name=FAM197Y1
HG00140_chrY	CAT	transcript	6289983	6292213	1000	+	.	source_transcript=ENST00000421178.2;source_transcript_name=FAM197Y1-201;source_gene=ENSG00000224336.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224336.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421178.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421178.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y1;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;transcript_id=HG00140_ch_T0000460;gene_id=HG00140_ch_G0000110;Parent=HG00140_ch_G0000110;transcript_name=HG00140_ch_T0000460;gene_name=FAM197Y1;ID=HG00140_ch_T0000460;Name=FAM197Y1
HG00140_chrY	CAT	exon	6289983	6290338	.	+	.	source_transcript=ENST00000421178.2;source_transcript_name=FAM197Y1-201;source_gene=ENSG00000224336.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224336.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421178.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421178.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y1;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;transcript_id=HG00140_ch_T0000460;gene_id=HG00140_ch_G0000110;Parent=HG00140_ch_T0000460;transcript_name=HG00140_ch_T0000460;gene_name=FAM197Y1;ID=exon:HG00140_ch_T0000460:0;Name=FAM197Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6290339	6291405	.	+	.	source_transcript=ENST00000421178.2;source_transcript_name=FAM197Y1-201;source_gene=ENSG00000224336.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224336.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421178.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421178.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y1;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;transcript_id=HG00140_ch_T0000460;gene_id=HG00140_ch_G0000110;Parent=HG00140_ch_T0000460;transcript_name=HG00140_ch_T0000460;gene_name=FAM197Y1;ID=intron:HG00140_ch_T0000460:0;Name=FAM197Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6291406	6291467	.	+	.	source_transcript=ENST00000421178.2;source_transcript_name=FAM197Y1-201;source_gene=ENSG00000224336.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224336.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421178.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421178.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y1;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;transcript_id=HG00140_ch_T0000460;gene_id=HG00140_ch_G0000110;Parent=HG00140_ch_T0000460;transcript_name=HG00140_ch_T0000460;gene_name=FAM197Y1;ID=exon:HG00140_ch_T0000460:1;Name=FAM197Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6291468	6291663	.	+	.	source_transcript=ENST00000421178.2;source_transcript_name=FAM197Y1-201;source_gene=ENSG00000224336.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224336.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421178.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421178.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y1;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;transcript_id=HG00140_ch_T0000460;gene_id=HG00140_ch_G0000110;Parent=HG00140_ch_T0000460;transcript_name=HG00140_ch_T0000460;gene_name=FAM197Y1;ID=intron:HG00140_ch_T0000460:1;Name=FAM197Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6291664	6291773	.	+	.	source_transcript=ENST00000421178.2;source_transcript_name=FAM197Y1-201;source_gene=ENSG00000224336.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224336.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421178.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421178.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y1;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;transcript_id=HG00140_ch_T0000460;gene_id=HG00140_ch_G0000110;Parent=HG00140_ch_T0000460;transcript_name=HG00140_ch_T0000460;gene_name=FAM197Y1;ID=exon:HG00140_ch_T0000460:2;Name=FAM197Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6291774	6291859	.	+	.	source_transcript=ENST00000421178.2;source_transcript_name=FAM197Y1-201;source_gene=ENSG00000224336.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224336.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421178.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421178.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y1;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;transcript_id=HG00140_ch_T0000460;gene_id=HG00140_ch_G0000110;Parent=HG00140_ch_T0000460;transcript_name=HG00140_ch_T0000460;gene_name=FAM197Y1;ID=intron:HG00140_ch_T0000460:2;Name=FAM197Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6291860	6292005	.	+	.	source_transcript=ENST00000421178.2;source_transcript_name=FAM197Y1-201;source_gene=ENSG00000224336.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224336.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421178.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421178.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y1;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;transcript_id=HG00140_ch_T0000460;gene_id=HG00140_ch_G0000110;Parent=HG00140_ch_T0000460;transcript_name=HG00140_ch_T0000460;gene_name=FAM197Y1;ID=exon:HG00140_ch_T0000460:3;Name=FAM197Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6292006	6292123	.	+	.	source_transcript=ENST00000421178.2;source_transcript_name=FAM197Y1-201;source_gene=ENSG00000224336.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224336.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421178.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421178.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y1;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;transcript_id=HG00140_ch_T0000460;gene_id=HG00140_ch_G0000110;Parent=HG00140_ch_T0000460;transcript_name=HG00140_ch_T0000460;gene_name=FAM197Y1;ID=intron:HG00140_ch_T0000460:3;Name=FAM197Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6292124	6292213	.	+	.	source_transcript=ENST00000421178.2;source_transcript_name=FAM197Y1-201;source_gene=ENSG00000224336.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224336.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421178.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421178.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y1;alternative_source_transcripts=ENST00000421178.2,ENST00000421178.2;transcript_id=HG00140_ch_T0000460;gene_id=HG00140_ch_G0000110;Parent=HG00140_ch_T0000460;transcript_name=HG00140_ch_T0000460;gene_name=FAM197Y1;ID=exon:HG00140_ch_T0000460:4;Name=FAM197Y1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6306461	6309273	.	-	.	source_gene_common_name=TSPY9;source_gene=ENSG00000238074.6;gene_id=HG00140_ch_G0000111;gene_biotype=protein_coding;gene_name=TSPY9;gene_sources=liftoff;ID=HG00140_ch_G0000111;Name=TSPY9
HG00140_chrY	CAT	transcript	6306461	6309273	100	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000461;gene_id=HG00140_ch_G0000111;Parent=HG00140_ch_G0000111;transcript_name=HG00140_ch_T0000461;gene_name=TSPY9;ID=HG00140_ch_T0000461;Name=TSPY9
HG00140_chrY	CAT	exon	6306461	6306671	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000461;gene_id=HG00140_ch_G0000111;Parent=HG00140_ch_T0000461;transcript_name=HG00140_ch_T0000461;gene_name=TSPY9;ID=exon:HG00140_ch_T0000461:0;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6306649	6306671	.	-	2	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000461;gene_id=HG00140_ch_G0000111;Parent=HG00140_ch_T0000461;transcript_name=HG00140_ch_T0000461;gene_name=TSPY9;ID=CDS:HG00140_ch_T0000461:0;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6306649	6306651	.	-	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000461;gene_id=HG00140_ch_G0000111;Parent=HG00140_ch_T0000461;transcript_name=HG00140_ch_T0000461;gene_name=TSPY9;ID=stop_codon:HG00140_ch_T0000461;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6306672	6307363	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000461;gene_id=HG00140_ch_G0000111;Parent=HG00140_ch_T0000461;transcript_name=HG00140_ch_T0000461;gene_name=TSPY9;ID=intron:HG00140_ch_T0000461:0;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6307364	6307445	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000461;gene_id=HG00140_ch_G0000111;Parent=HG00140_ch_T0000461;transcript_name=HG00140_ch_T0000461;gene_name=TSPY9;ID=exon:HG00140_ch_T0000461:1;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6307364	6307445	.	-	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000461;gene_id=HG00140_ch_G0000111;Parent=HG00140_ch_T0000461;transcript_name=HG00140_ch_T0000461;gene_name=TSPY9;ID=CDS:HG00140_ch_T0000461:1;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6307446	6307551	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000461;gene_id=HG00140_ch_G0000111;Parent=HG00140_ch_T0000461;transcript_name=HG00140_ch_T0000461;gene_name=TSPY9;ID=intron:HG00140_ch_T0000461:1;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6307552	6307697	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000461;gene_id=HG00140_ch_G0000111;Parent=HG00140_ch_T0000461;transcript_name=HG00140_ch_T0000461;gene_name=TSPY9;ID=exon:HG00140_ch_T0000461:2;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6307552	6307697	.	-	2	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000461;gene_id=HG00140_ch_G0000111;Parent=HG00140_ch_T0000461;transcript_name=HG00140_ch_T0000461;gene_name=TSPY9;ID=CDS:HG00140_ch_T0000461:2;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6307698	6307798	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000461;gene_id=HG00140_ch_G0000111;Parent=HG00140_ch_T0000461;transcript_name=HG00140_ch_T0000461;gene_name=TSPY9;ID=intron:HG00140_ch_T0000461:2;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6307799	6307910	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000461;gene_id=HG00140_ch_G0000111;Parent=HG00140_ch_T0000461;transcript_name=HG00140_ch_T0000461;gene_name=TSPY9;ID=exon:HG00140_ch_T0000461:3;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6307799	6307910	.	-	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000461;gene_id=HG00140_ch_G0000111;Parent=HG00140_ch_T0000461;transcript_name=HG00140_ch_T0000461;gene_name=TSPY9;ID=CDS:HG00140_ch_T0000461:3;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6307911	6308038	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000461;gene_id=HG00140_ch_G0000111;Parent=HG00140_ch_T0000461;transcript_name=HG00140_ch_T0000461;gene_name=TSPY9;ID=intron:HG00140_ch_T0000461:3;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6308039	6308116	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000461;gene_id=HG00140_ch_G0000111;Parent=HG00140_ch_T0000461;transcript_name=HG00140_ch_T0000461;gene_name=TSPY9;ID=exon:HG00140_ch_T0000461:4;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6308039	6308116	.	-	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000461;gene_id=HG00140_ch_G0000111;Parent=HG00140_ch_T0000461;transcript_name=HG00140_ch_T0000461;gene_name=TSPY9;ID=CDS:HG00140_ch_T0000461:4;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6308117	6308723	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000461;gene_id=HG00140_ch_G0000111;Parent=HG00140_ch_T0000461;transcript_name=HG00140_ch_T0000461;gene_name=TSPY9;ID=intron:HG00140_ch_T0000461:4;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6308724	6309273	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000461;gene_id=HG00140_ch_G0000111;Parent=HG00140_ch_T0000461;transcript_name=HG00140_ch_T0000461;gene_name=TSPY9;ID=exon:HG00140_ch_T0000461:5;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6308724	6309227	.	-	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000461;gene_id=HG00140_ch_G0000111;Parent=HG00140_ch_T0000461;transcript_name=HG00140_ch_T0000461;gene_name=TSPY9;ID=CDS:HG00140_ch_T0000461:5;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6309225	6309227	.	-	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000461;gene_id=HG00140_ch_G0000111;Parent=HG00140_ch_T0000461;transcript_name=HG00140_ch_T0000461;gene_name=TSPY9;ID=start_codon:HG00140_ch_T0000461;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6310226	6312219	.	+	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000234830.9_7;gene_id=HG00140_ch_G0000112;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG00140_ch_G0000112;Name=FAM197Y9
HG00140_chrY	CAT	transcript	6310226	6312219	1000	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000462;gene_id=HG00140_ch_G0000112;Parent=HG00140_ch_G0000112;transcript_name=HG00140_ch_T0000462;gene_name=FAM197Y9;ID=HG00140_ch_T0000462;Name=FAM197Y9
HG00140_chrY	CAT	exon	6310226	6310535	.	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000462;gene_id=HG00140_ch_G0000112;Parent=HG00140_ch_T0000462;transcript_name=HG00140_ch_T0000462;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000462:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6310536	6311877	.	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000462;gene_id=HG00140_ch_G0000112;Parent=HG00140_ch_T0000462;transcript_name=HG00140_ch_T0000462;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000462:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6311878	6311961	.	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000462;gene_id=HG00140_ch_G0000112;Parent=HG00140_ch_T0000462;transcript_name=HG00140_ch_T0000462;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000462:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6311962	6312073	.	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000462;gene_id=HG00140_ch_G0000112;Parent=HG00140_ch_T0000462;transcript_name=HG00140_ch_T0000462;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000462:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6312074	6312219	.	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000462;gene_id=HG00140_ch_G0000112;Parent=HG00140_ch_T0000462;transcript_name=HG00140_ch_T0000462;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000462:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6311868	6319541	.	+	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000290448.1_7;gene_id=HG00140_ch_G0000113;gene_biotype=lncRNA;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG00140_ch_G0000113;Name=FAM197Y9
HG00140_chrY	CAT	transcript	6311868	6319541	1000	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000463;gene_id=HG00140_ch_G0000113;Parent=HG00140_ch_G0000113;transcript_name=HG00140_ch_T0000463;gene_name=FAM197Y9;ID=HG00140_ch_T0000463;Name=FAM197Y9
HG00140_chrY	CAT	exon	6311868	6311987	.	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000463;gene_id=HG00140_ch_G0000113;Parent=HG00140_ch_T0000463;transcript_name=HG00140_ch_T0000463;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000463:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6311988	6313783	.	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000463;gene_id=HG00140_ch_G0000113;Parent=HG00140_ch_T0000463;transcript_name=HG00140_ch_T0000463;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000463:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6313784	6313869	.	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000463;gene_id=HG00140_ch_G0000113;Parent=HG00140_ch_T0000463;transcript_name=HG00140_ch_T0000463;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000463:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6313870	6317415	.	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000463;gene_id=HG00140_ch_G0000113;Parent=HG00140_ch_T0000463;transcript_name=HG00140_ch_T0000463;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000463:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6317416	6319541	.	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000463;gene_id=HG00140_ch_G0000113;Parent=HG00140_ch_T0000463;transcript_name=HG00140_ch_T0000463;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000463:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6311886	6317475	1000	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000464;gene_id=HG00140_ch_G0000113;Parent=HG00140_ch_G0000113;transcript_name=HG00140_ch_T0000464;gene_name=FAM197Y9;ID=HG00140_ch_T0000464;Name=FAM197Y9
HG00140_chrY	CAT	exon	6311886	6311987	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000464;gene_id=HG00140_ch_G0000113;Parent=HG00140_ch_T0000464;transcript_name=HG00140_ch_T0000464;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000464:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6311988	6312073	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000464;gene_id=HG00140_ch_G0000113;Parent=HG00140_ch_T0000464;transcript_name=HG00140_ch_T0000464;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000464:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6312074	6312219	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000464;gene_id=HG00140_ch_G0000113;Parent=HG00140_ch_T0000464;transcript_name=HG00140_ch_T0000464;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000464:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6312220	6313710	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000464;gene_id=HG00140_ch_G0000113;Parent=HG00140_ch_T0000464;transcript_name=HG00140_ch_T0000464;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000464:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6313711	6313869	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000464;gene_id=HG00140_ch_G0000113;Parent=HG00140_ch_T0000464;transcript_name=HG00140_ch_T0000464;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000464:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6313870	6317415	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000464;gene_id=HG00140_ch_G0000113;Parent=HG00140_ch_T0000464;transcript_name=HG00140_ch_T0000464;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000464:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6317416	6317475	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000464;gene_id=HG00140_ch_G0000113;Parent=HG00140_ch_T0000464;transcript_name=HG00140_ch_T0000464;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000464:3;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6326781	6329537	.	-	.	source_gene_common_name=TSPY3;source_gene=ENSG00000228927.10;gene_id=HG00140_ch_G0000114;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff;ID=HG00140_ch_G0000114;Name=TSPY3
HG00140_chrY	CAT	transcript	6326781	6329537	1000	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000465;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_G0000114;transcript_name=HG00140_ch_T0000465;gene_name=TSPY3;ID=HG00140_ch_T0000465;Name=TSPY3
HG00140_chrY	CAT	exon	6326781	6327564	.	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000465;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000465;transcript_name=HG00140_ch_T0000465;gene_name=TSPY3;ID=exon:HG00140_ch_T0000465:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6327565	6327691	.	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000465;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000465;transcript_name=HG00140_ch_T0000465;gene_name=TSPY3;ID=intron:HG00140_ch_T0000465:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6327692	6328238	.	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000465;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000465;transcript_name=HG00140_ch_T0000465;gene_name=TSPY3;ID=exon:HG00140_ch_T0000465:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6328239	6328366	.	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000465;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000465;transcript_name=HG00140_ch_T0000465;gene_name=TSPY3;ID=intron:HG00140_ch_T0000465:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6328367	6328444	.	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000465;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000465;transcript_name=HG00140_ch_T0000465;gene_name=TSPY3;ID=exon:HG00140_ch_T0000465:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6328445	6329051	.	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000465;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000465;transcript_name=HG00140_ch_T0000465;gene_name=TSPY3;ID=intron:HG00140_ch_T0000465:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6329052	6329537	.	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000465;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000465;transcript_name=HG00140_ch_T0000465;gene_name=TSPY3;ID=exon:HG00140_ch_T0000465:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6326787	6329583	100	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000466;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_G0000114;transcript_name=HG00140_ch_T0000466;gene_name=TSPY3;ID=HG00140_ch_T0000466;Name=TSPY3
HG00140_chrY	CAT	exon	6326787	6326997	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000466;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000466;transcript_name=HG00140_ch_T0000466;gene_name=TSPY3;ID=exon:HG00140_ch_T0000466:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6326975	6326997	.	-	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000466;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000466;transcript_name=HG00140_ch_T0000466;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000466:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6326975	6326977	.	-	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000466;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000466;transcript_name=HG00140_ch_T0000466;gene_name=TSPY3;ID=stop_codon:HG00140_ch_T0000466;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6326998	6327691	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000466;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000466;transcript_name=HG00140_ch_T0000466;gene_name=TSPY3;ID=intron:HG00140_ch_T0000466:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6327692	6327773	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000466;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000466;transcript_name=HG00140_ch_T0000466;gene_name=TSPY3;ID=exon:HG00140_ch_T0000466:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6327692	6327773	.	-	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000466;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000466;transcript_name=HG00140_ch_T0000466;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000466:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6327774	6327879	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000466;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000466;transcript_name=HG00140_ch_T0000466;gene_name=TSPY3;ID=intron:HG00140_ch_T0000466:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6327880	6328025	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000466;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000466;transcript_name=HG00140_ch_T0000466;gene_name=TSPY3;ID=exon:HG00140_ch_T0000466:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6327880	6328025	.	-	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000466;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000466;transcript_name=HG00140_ch_T0000466;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000466:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6328026	6328126	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000466;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000466;transcript_name=HG00140_ch_T0000466;gene_name=TSPY3;ID=intron:HG00140_ch_T0000466:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6328127	6328238	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000466;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000466;transcript_name=HG00140_ch_T0000466;gene_name=TSPY3;ID=exon:HG00140_ch_T0000466:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6328127	6328238	.	-	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000466;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000466;transcript_name=HG00140_ch_T0000466;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000466:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6328239	6328366	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000466;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000466;transcript_name=HG00140_ch_T0000466;gene_name=TSPY3;ID=intron:HG00140_ch_T0000466:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6328367	6328444	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000466;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000466;transcript_name=HG00140_ch_T0000466;gene_name=TSPY3;ID=exon:HG00140_ch_T0000466:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6328367	6328444	.	-	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000466;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000466;transcript_name=HG00140_ch_T0000466;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000466:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6328445	6329051	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000466;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000466;transcript_name=HG00140_ch_T0000466;gene_name=TSPY3;ID=intron:HG00140_ch_T0000466:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6329052	6329583	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000466;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000466;transcript_name=HG00140_ch_T0000466;gene_name=TSPY3;ID=exon:HG00140_ch_T0000466:5;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6329052	6329537	.	-	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000466;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000466;transcript_name=HG00140_ch_T0000466;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000466:5;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6329535	6329537	.	-	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000466;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000466;transcript_name=HG00140_ch_T0000466;gene_name=TSPY3;ID=start_codon:HG00140_ch_T0000466;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6326788	6329537	100	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000467;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_G0000114;transcript_name=HG00140_ch_T0000467;gene_name=TSPY3;ID=HG00140_ch_T0000467;Name=TSPY3
HG00140_chrY	CAT	exon	6326788	6326997	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000467;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000467;transcript_name=HG00140_ch_T0000467;gene_name=TSPY3;ID=exon:HG00140_ch_T0000467:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6326998	6327691	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000467;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000467;transcript_name=HG00140_ch_T0000467;gene_name=TSPY3;ID=intron:HG00140_ch_T0000467:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6327692	6327784	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000467;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000467;transcript_name=HG00140_ch_T0000467;gene_name=TSPY3;ID=exon:HG00140_ch_T0000467:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6327722	6327784	.	-	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000467;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000467;transcript_name=HG00140_ch_T0000467;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000467:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6327722	6327724	.	-	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000467;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000467;transcript_name=HG00140_ch_T0000467;gene_name=TSPY3;ID=stop_codon:HG00140_ch_T0000467;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6327785	6327879	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000467;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000467;transcript_name=HG00140_ch_T0000467;gene_name=TSPY3;ID=intron:HG00140_ch_T0000467:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6327880	6328025	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000467;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000467;transcript_name=HG00140_ch_T0000467;gene_name=TSPY3;ID=exon:HG00140_ch_T0000467:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6327880	6328025	.	-	2	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000467;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000467;transcript_name=HG00140_ch_T0000467;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000467:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6328026	6328126	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000467;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000467;transcript_name=HG00140_ch_T0000467;gene_name=TSPY3;ID=intron:HG00140_ch_T0000467:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6328127	6328238	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000467;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000467;transcript_name=HG00140_ch_T0000467;gene_name=TSPY3;ID=exon:HG00140_ch_T0000467:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6328127	6328238	.	-	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000467;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000467;transcript_name=HG00140_ch_T0000467;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000467:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6328239	6328366	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000467;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000467;transcript_name=HG00140_ch_T0000467;gene_name=TSPY3;ID=intron:HG00140_ch_T0000467:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6328367	6328444	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000467;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000467;transcript_name=HG00140_ch_T0000467;gene_name=TSPY3;ID=exon:HG00140_ch_T0000467:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6328367	6328444	.	-	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000467;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000467;transcript_name=HG00140_ch_T0000467;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000467:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6328445	6329051	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000467;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000467;transcript_name=HG00140_ch_T0000467;gene_name=TSPY3;ID=intron:HG00140_ch_T0000467:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6329052	6329537	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000467;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000467;transcript_name=HG00140_ch_T0000467;gene_name=TSPY3;ID=exon:HG00140_ch_T0000467:5;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6329052	6329537	.	-	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000467;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000467;transcript_name=HG00140_ch_T0000467;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000467:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6329535	6329537	.	-	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000467;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000467;transcript_name=HG00140_ch_T0000467;gene_name=TSPY3;ID=start_codon:HG00140_ch_T0000467;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6326796	6328177	1000	-	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000468;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_G0000114;transcript_name=HG00140_ch_T0000468;gene_name=TSPY3;ID=HG00140_ch_T0000468;Name=TSPY3
HG00140_chrY	CAT	exon	6326796	6326997	.	-	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000468;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000468;transcript_name=HG00140_ch_T0000468;gene_name=TSPY3;ID=exon:HG00140_ch_T0000468:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6326998	6327691	.	-	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000468;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000468;transcript_name=HG00140_ch_T0000468;gene_name=TSPY3;ID=intron:HG00140_ch_T0000468:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6327692	6327784	.	-	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000468;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000468;transcript_name=HG00140_ch_T0000468;gene_name=TSPY3;ID=exon:HG00140_ch_T0000468:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6327785	6327879	.	-	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000468;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000468;transcript_name=HG00140_ch_T0000468;gene_name=TSPY3;ID=intron:HG00140_ch_T0000468:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6327880	6328177	.	-	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000468;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000468;transcript_name=HG00140_ch_T0000468;gene_name=TSPY3;ID=exon:HG00140_ch_T0000468:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6326975	6329537	100	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000469;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_G0000114;transcript_name=HG00140_ch_T0000469;gene_name=TSPY3;ID=HG00140_ch_T0000469;Name=TSPY3
HG00140_chrY	CAT	exon	6326975	6326997	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000469;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000469;transcript_name=HG00140_ch_T0000469;gene_name=TSPY3;ID=exon:HG00140_ch_T0000469:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6326975	6326997	.	-	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000469;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000469;transcript_name=HG00140_ch_T0000469;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000469:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6326975	6326977	.	-	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000469;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000469;transcript_name=HG00140_ch_T0000469;gene_name=TSPY3;ID=stop_codon:HG00140_ch_T0000469;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6326998	6327691	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000469;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000469;transcript_name=HG00140_ch_T0000469;gene_name=TSPY3;ID=intron:HG00140_ch_T0000469:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6327692	6327773	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000469;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000469;transcript_name=HG00140_ch_T0000469;gene_name=TSPY3;ID=exon:HG00140_ch_T0000469:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6327692	6327773	.	-	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000469;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000469;transcript_name=HG00140_ch_T0000469;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000469:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6327774	6327879	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000469;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000469;transcript_name=HG00140_ch_T0000469;gene_name=TSPY3;ID=intron:HG00140_ch_T0000469:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6327880	6328025	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000469;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000469;transcript_name=HG00140_ch_T0000469;gene_name=TSPY3;ID=exon:HG00140_ch_T0000469:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6327880	6328025	.	-	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000469;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000469;transcript_name=HG00140_ch_T0000469;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000469:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6328026	6328126	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000469;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000469;transcript_name=HG00140_ch_T0000469;gene_name=TSPY3;ID=intron:HG00140_ch_T0000469:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6328127	6328238	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000469;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000469;transcript_name=HG00140_ch_T0000469;gene_name=TSPY3;ID=exon:HG00140_ch_T0000469:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6328127	6328238	.	-	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000469;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000469;transcript_name=HG00140_ch_T0000469;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000469:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6328239	6328366	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000469;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000469;transcript_name=HG00140_ch_T0000469;gene_name=TSPY3;ID=intron:HG00140_ch_T0000469:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6328367	6328444	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000469;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000469;transcript_name=HG00140_ch_T0000469;gene_name=TSPY3;ID=exon:HG00140_ch_T0000469:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6328367	6328444	.	-	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000469;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000469;transcript_name=HG00140_ch_T0000469;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000469:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6328445	6329051	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000469;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000469;transcript_name=HG00140_ch_T0000469;gene_name=TSPY3;ID=intron:HG00140_ch_T0000469:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6329052	6329189	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000469;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000469;transcript_name=HG00140_ch_T0000469;gene_name=TSPY3;ID=exon:HG00140_ch_T0000469:5;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6329052	6329189	.	-	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000469;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000469;transcript_name=HG00140_ch_T0000469;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000469:5;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6329190	6329450	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000469;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000469;transcript_name=HG00140_ch_T0000469;gene_name=TSPY3;ID=intron:HG00140_ch_T0000469:5;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6329451	6329537	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000469;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000469;transcript_name=HG00140_ch_T0000469;gene_name=TSPY3;ID=exon:HG00140_ch_T0000469:6;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6329451	6329537	.	-	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000469;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000469;transcript_name=HG00140_ch_T0000469;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000469:6;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6329535	6329537	.	-	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000469;gene_id=HG00140_ch_G0000114;Parent=HG00140_ch_T0000469;transcript_name=HG00140_ch_T0000469;gene_name=TSPY3;ID=start_codon:HG00140_ch_T0000469;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6330534	6332526	.	+	.	source_gene_common_name=FAM197Y3;source_gene=ENSG00000230066.7_1;gene_id=HG00140_ch_G0000115;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG00140_ch_G0000115;Name=FAM197Y3
HG00140_chrY	CAT	transcript	6330534	6332526	1000	+	.	source_transcript=ENST00000618346.2;source_transcript_name=FAM197Y3-201;source_gene=ENSG00000230066.7_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230066.7_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618346.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618346.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00140_ch_T0000470;gene_id=HG00140_ch_G0000115;Parent=HG00140_ch_G0000115;transcript_name=HG00140_ch_T0000470;gene_name=FAM197Y3;ID=HG00140_ch_T0000470;Name=FAM197Y3
HG00140_chrY	CAT	exon	6330534	6330844	.	+	.	source_transcript=ENST00000618346.2;source_transcript_name=FAM197Y3-201;source_gene=ENSG00000230066.7_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230066.7_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618346.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618346.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00140_ch_T0000470;gene_id=HG00140_ch_G0000115;Parent=HG00140_ch_T0000470;transcript_name=HG00140_ch_T0000470;gene_name=FAM197Y3;ID=exon:HG00140_ch_T0000470:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6330845	6332380	.	+	.	source_transcript=ENST00000618346.2;source_transcript_name=FAM197Y3-201;source_gene=ENSG00000230066.7_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230066.7_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618346.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618346.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00140_ch_T0000470;gene_id=HG00140_ch_G0000115;Parent=HG00140_ch_T0000470;transcript_name=HG00140_ch_T0000470;gene_name=FAM197Y3;ID=intron:HG00140_ch_T0000470:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6332381	6332526	.	+	.	source_transcript=ENST00000618346.2;source_transcript_name=FAM197Y3-201;source_gene=ENSG00000230066.7_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230066.7_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618346.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618346.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00140_ch_T0000470;gene_id=HG00140_ch_G0000115;Parent=HG00140_ch_T0000470;transcript_name=HG00140_ch_T0000470;gene_name=FAM197Y3;ID=exon:HG00140_ch_T0000470:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6331974	6339851	.	+	.	source_gene_common_name=FAM197Y3;source_gene=ENSG00000290607.1_1;gene_id=HG00140_ch_G0000116;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG00140_ch_G0000116;Name=FAM197Y3
HG00140_chrY	CAT	transcript	6331974	6339851	1000	+	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00140_ch_T0000471;gene_id=HG00140_ch_G0000116;Parent=HG00140_ch_G0000116;transcript_name=HG00140_ch_T0000471;gene_name=FAM197Y3;ID=HG00140_ch_T0000471;Name=FAM197Y3
HG00140_chrY	CAT	exon	6331974	6331988	.	+	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00140_ch_T0000471;gene_id=HG00140_ch_G0000116;Parent=HG00140_ch_T0000471;transcript_name=HG00140_ch_T0000471;gene_name=FAM197Y3;ID=exon:HG00140_ch_T0000471:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6331989	6332184	.	+	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00140_ch_T0000471;gene_id=HG00140_ch_G0000116;Parent=HG00140_ch_T0000471;transcript_name=HG00140_ch_T0000471;gene_name=FAM197Y3;ID=intron:HG00140_ch_T0000471:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6332185	6332294	.	+	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00140_ch_T0000471;gene_id=HG00140_ch_G0000116;Parent=HG00140_ch_T0000471;transcript_name=HG00140_ch_T0000471;gene_name=FAM197Y3;ID=exon:HG00140_ch_T0000471:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6332295	6334102	.	+	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00140_ch_T0000471;gene_id=HG00140_ch_G0000116;Parent=HG00140_ch_T0000471;transcript_name=HG00140_ch_T0000471;gene_name=FAM197Y3;ID=intron:HG00140_ch_T0000471:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6334103	6334188	.	+	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00140_ch_T0000471;gene_id=HG00140_ch_G0000116;Parent=HG00140_ch_T0000471;transcript_name=HG00140_ch_T0000471;gene_name=FAM197Y3;ID=exon:HG00140_ch_T0000471:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6334189	6337737	.	+	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00140_ch_T0000471;gene_id=HG00140_ch_G0000116;Parent=HG00140_ch_T0000471;transcript_name=HG00140_ch_T0000471;gene_name=FAM197Y3;ID=intron:HG00140_ch_T0000471:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6337738	6339851	.	+	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00140_ch_T0000471;gene_id=HG00140_ch_G0000116;Parent=HG00140_ch_T0000471;transcript_name=HG00140_ch_T0000471;gene_name=FAM197Y3;ID=exon:HG00140_ch_T0000471:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6332193	6337797	1000	+	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00140_ch_T0000472;gene_id=HG00140_ch_G0000116;Parent=HG00140_ch_G0000116;transcript_name=HG00140_ch_T0000472;gene_name=FAM197Y3;ID=HG00140_ch_T0000472;Name=FAM197Y3
HG00140_chrY	CAT	exon	6332193	6332294	.	+	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00140_ch_T0000472;gene_id=HG00140_ch_G0000116;Parent=HG00140_ch_T0000472;transcript_name=HG00140_ch_T0000472;gene_name=FAM197Y3;ID=exon:HG00140_ch_T0000472:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6332295	6332380	.	+	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00140_ch_T0000472;gene_id=HG00140_ch_G0000116;Parent=HG00140_ch_T0000472;transcript_name=HG00140_ch_T0000472;gene_name=FAM197Y3;ID=intron:HG00140_ch_T0000472:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6332381	6332526	.	+	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00140_ch_T0000472;gene_id=HG00140_ch_G0000116;Parent=HG00140_ch_T0000472;transcript_name=HG00140_ch_T0000472;gene_name=FAM197Y3;ID=exon:HG00140_ch_T0000472:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6332527	6334029	.	+	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00140_ch_T0000472;gene_id=HG00140_ch_G0000116;Parent=HG00140_ch_T0000472;transcript_name=HG00140_ch_T0000472;gene_name=FAM197Y3;ID=intron:HG00140_ch_T0000472:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6334030	6334188	.	+	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00140_ch_T0000472;gene_id=HG00140_ch_G0000116;Parent=HG00140_ch_T0000472;transcript_name=HG00140_ch_T0000472;gene_name=FAM197Y3;ID=exon:HG00140_ch_T0000472:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6334189	6337737	.	+	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00140_ch_T0000472;gene_id=HG00140_ch_G0000116;Parent=HG00140_ch_T0000472;transcript_name=HG00140_ch_T0000472;gene_name=FAM197Y3;ID=intron:HG00140_ch_T0000472:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6337738	6337797	.	+	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00140_ch_T0000472;gene_id=HG00140_ch_G0000116;Parent=HG00140_ch_T0000472;transcript_name=HG00140_ch_T0000472;gene_name=FAM197Y3;ID=exon:HG00140_ch_T0000472:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6347109	6349911	.	-	.	source_gene_common_name=TSPY10;source_gene=ENSG00000236424.7;gene_id=HG00140_ch_G0000117;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG00140_ch_G0000117;Name=TSPY10
HG00140_chrY	CAT	transcript	6347109	6349865	1000	-	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000473;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_G0000117;transcript_name=HG00140_ch_T0000473;gene_name=TSPY10;ID=HG00140_ch_T0000473;Name=TSPY10
HG00140_chrY	CAT	exon	6347109	6347892	.	-	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000473;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_T0000473;transcript_name=HG00140_ch_T0000473;gene_name=TSPY10;ID=exon:HG00140_ch_T0000473:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6347893	6348019	.	-	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000473;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_T0000473;transcript_name=HG00140_ch_T0000473;gene_name=TSPY10;ID=intron:HG00140_ch_T0000473:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6348020	6348566	.	-	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000473;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_T0000473;transcript_name=HG00140_ch_T0000473;gene_name=TSPY10;ID=exon:HG00140_ch_T0000473:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6348567	6348694	.	-	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000473;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_T0000473;transcript_name=HG00140_ch_T0000473;gene_name=TSPY10;ID=intron:HG00140_ch_T0000473:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6348695	6348772	.	-	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000473;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_T0000473;transcript_name=HG00140_ch_T0000473;gene_name=TSPY10;ID=exon:HG00140_ch_T0000473:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6348773	6349379	.	-	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000473;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_T0000473;transcript_name=HG00140_ch_T0000473;gene_name=TSPY10;ID=intron:HG00140_ch_T0000473:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6349380	6349865	.	-	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000473;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_T0000473;transcript_name=HG00140_ch_T0000473;gene_name=TSPY10;ID=exon:HG00140_ch_T0000473:3;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6347115	6349911	100	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000474;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_G0000117;transcript_name=HG00140_ch_T0000474;gene_name=TSPY10;ID=HG00140_ch_T0000474;Name=TSPY10
HG00140_chrY	CAT	exon	6347115	6347325	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000474;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_T0000474;transcript_name=HG00140_ch_T0000474;gene_name=TSPY10;ID=exon:HG00140_ch_T0000474:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6347303	6347325	.	-	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000474;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_T0000474;transcript_name=HG00140_ch_T0000474;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000474:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6347303	6347305	.	-	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000474;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_T0000474;transcript_name=HG00140_ch_T0000474;gene_name=TSPY10;ID=stop_codon:HG00140_ch_T0000474;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6347326	6348019	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000474;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_T0000474;transcript_name=HG00140_ch_T0000474;gene_name=TSPY10;ID=intron:HG00140_ch_T0000474:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6348020	6348101	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000474;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_T0000474;transcript_name=HG00140_ch_T0000474;gene_name=TSPY10;ID=exon:HG00140_ch_T0000474:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6348020	6348101	.	-	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000474;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_T0000474;transcript_name=HG00140_ch_T0000474;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000474:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6348102	6348207	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000474;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_T0000474;transcript_name=HG00140_ch_T0000474;gene_name=TSPY10;ID=intron:HG00140_ch_T0000474:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6348208	6348353	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000474;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_T0000474;transcript_name=HG00140_ch_T0000474;gene_name=TSPY10;ID=exon:HG00140_ch_T0000474:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6348208	6348353	.	-	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000474;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_T0000474;transcript_name=HG00140_ch_T0000474;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000474:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6348354	6348454	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000474;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_T0000474;transcript_name=HG00140_ch_T0000474;gene_name=TSPY10;ID=intron:HG00140_ch_T0000474:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6348455	6348566	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000474;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_T0000474;transcript_name=HG00140_ch_T0000474;gene_name=TSPY10;ID=exon:HG00140_ch_T0000474:3;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6348455	6348566	.	-	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000474;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_T0000474;transcript_name=HG00140_ch_T0000474;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000474:3;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6348567	6348694	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000474;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_T0000474;transcript_name=HG00140_ch_T0000474;gene_name=TSPY10;ID=intron:HG00140_ch_T0000474:3;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6348695	6348772	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000474;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_T0000474;transcript_name=HG00140_ch_T0000474;gene_name=TSPY10;ID=exon:HG00140_ch_T0000474:4;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6348695	6348772	.	-	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000474;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_T0000474;transcript_name=HG00140_ch_T0000474;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000474:4;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6348773	6349379	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000474;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_T0000474;transcript_name=HG00140_ch_T0000474;gene_name=TSPY10;ID=intron:HG00140_ch_T0000474:4;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6349380	6349911	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000474;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_T0000474;transcript_name=HG00140_ch_T0000474;gene_name=TSPY10;ID=exon:HG00140_ch_T0000474:5;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6349380	6349865	.	-	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000474;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_T0000474;transcript_name=HG00140_ch_T0000474;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000474:5;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6349863	6349865	.	-	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000474;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_T0000474;transcript_name=HG00140_ch_T0000474;gene_name=TSPY10;ID=start_codon:HG00140_ch_T0000474;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6347116	6349865	100	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000475;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_G0000117;transcript_name=HG00140_ch_T0000475;gene_name=TSPY10;ID=HG00140_ch_T0000475;Name=TSPY10
HG00140_chrY	CAT	exon	6347116	6347325	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000475;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_T0000475;transcript_name=HG00140_ch_T0000475;gene_name=TSPY10;ID=exon:HG00140_ch_T0000475:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6347326	6348019	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000475;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_T0000475;transcript_name=HG00140_ch_T0000475;gene_name=TSPY10;ID=intron:HG00140_ch_T0000475:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6348020	6348112	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000475;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_T0000475;transcript_name=HG00140_ch_T0000475;gene_name=TSPY10;ID=exon:HG00140_ch_T0000475:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6348050	6348112	.	-	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000475;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_T0000475;transcript_name=HG00140_ch_T0000475;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000475:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6348050	6348052	.	-	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000475;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_T0000475;transcript_name=HG00140_ch_T0000475;gene_name=TSPY10;ID=stop_codon:HG00140_ch_T0000475;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6348113	6348207	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000475;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_T0000475;transcript_name=HG00140_ch_T0000475;gene_name=TSPY10;ID=intron:HG00140_ch_T0000475:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6348208	6348353	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000475;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_T0000475;transcript_name=HG00140_ch_T0000475;gene_name=TSPY10;ID=exon:HG00140_ch_T0000475:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6348208	6348353	.	-	2	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000475;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_T0000475;transcript_name=HG00140_ch_T0000475;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000475:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6348354	6348454	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000475;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_T0000475;transcript_name=HG00140_ch_T0000475;gene_name=TSPY10;ID=intron:HG00140_ch_T0000475:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6348455	6348566	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000475;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_T0000475;transcript_name=HG00140_ch_T0000475;gene_name=TSPY10;ID=exon:HG00140_ch_T0000475:3;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6348455	6348566	.	-	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000475;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_T0000475;transcript_name=HG00140_ch_T0000475;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000475:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6348567	6348694	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000475;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_T0000475;transcript_name=HG00140_ch_T0000475;gene_name=TSPY10;ID=intron:HG00140_ch_T0000475:3;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6348695	6348772	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000475;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_T0000475;transcript_name=HG00140_ch_T0000475;gene_name=TSPY10;ID=exon:HG00140_ch_T0000475:4;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6348695	6348772	.	-	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000475;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_T0000475;transcript_name=HG00140_ch_T0000475;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000475:3;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6348773	6349379	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000475;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_T0000475;transcript_name=HG00140_ch_T0000475;gene_name=TSPY10;ID=intron:HG00140_ch_T0000475:4;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6349380	6349865	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000475;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_T0000475;transcript_name=HG00140_ch_T0000475;gene_name=TSPY10;ID=exon:HG00140_ch_T0000475:5;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6349380	6349865	.	-	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000475;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_T0000475;transcript_name=HG00140_ch_T0000475;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000475:4;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6349863	6349865	.	-	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000475;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_T0000475;transcript_name=HG00140_ch_T0000475;gene_name=TSPY10;ID=start_codon:HG00140_ch_T0000475;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6347124	6348505	1000	-	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000476;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_G0000117;transcript_name=HG00140_ch_T0000476;gene_name=TSPY10;ID=HG00140_ch_T0000476;Name=TSPY10
HG00140_chrY	CAT	exon	6347124	6347325	.	-	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000476;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_T0000476;transcript_name=HG00140_ch_T0000476;gene_name=TSPY10;ID=exon:HG00140_ch_T0000476:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6347326	6348019	.	-	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000476;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_T0000476;transcript_name=HG00140_ch_T0000476;gene_name=TSPY10;ID=intron:HG00140_ch_T0000476:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6348020	6348101	.	-	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000476;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_T0000476;transcript_name=HG00140_ch_T0000476;gene_name=TSPY10;ID=exon:HG00140_ch_T0000476:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6348102	6348207	.	-	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000476;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_T0000476;transcript_name=HG00140_ch_T0000476;gene_name=TSPY10;ID=intron:HG00140_ch_T0000476:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6348208	6348505	.	-	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000476;gene_id=HG00140_ch_G0000117;Parent=HG00140_ch_T0000476;transcript_name=HG00140_ch_T0000476;gene_name=TSPY10;ID=exon:HG00140_ch_T0000476:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6350865	6352857	.	+	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_6;gene_id=HG00140_ch_G0000118;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG00140_ch_G0000118;Name=FAM197Y5
HG00140_chrY	CAT	transcript	6350865	6352857	1000	+	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000477;gene_id=HG00140_ch_G0000118;Parent=HG00140_ch_G0000118;transcript_name=HG00140_ch_T0000477;gene_name=FAM197Y5;ID=HG00140_ch_T0000477;Name=FAM197Y5
HG00140_chrY	CAT	exon	6350865	6351175	.	+	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000477;gene_id=HG00140_ch_G0000118;Parent=HG00140_ch_T0000477;transcript_name=HG00140_ch_T0000477;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000477:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6351176	6352711	.	+	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000477;gene_id=HG00140_ch_G0000118;Parent=HG00140_ch_T0000477;transcript_name=HG00140_ch_T0000477;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000477:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6352712	6352857	.	+	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000477;gene_id=HG00140_ch_G0000118;Parent=HG00140_ch_T0000477;transcript_name=HG00140_ch_T0000477;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000477:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6352512	6358260	.	+	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1_6;gene_id=HG00140_ch_G0000119;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG00140_ch_G0000119;Name=FAM197Y5
HG00140_chrY	CAT	transcript	6352512	6358260	1000	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000478;gene_id=HG00140_ch_G0000119;Parent=HG00140_ch_G0000119;transcript_name=HG00140_ch_T0000478;gene_name=FAM197Y5;ID=HG00140_ch_T0000478;Name=FAM197Y5
HG00140_chrY	CAT	exon	6352512	6352625	.	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000478;gene_id=HG00140_ch_G0000119;Parent=HG00140_ch_T0000478;transcript_name=HG00140_ch_T0000478;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000478:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6352626	6354434	.	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000478;gene_id=HG00140_ch_G0000119;Parent=HG00140_ch_T0000478;transcript_name=HG00140_ch_T0000478;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000478:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6354435	6354520	.	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000478;gene_id=HG00140_ch_G0000119;Parent=HG00140_ch_T0000478;transcript_name=HG00140_ch_T0000478;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000478:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6354521	6358070	.	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000478;gene_id=HG00140_ch_G0000119;Parent=HG00140_ch_T0000478;transcript_name=HG00140_ch_T0000478;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000478:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6358071	6358260	.	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000478;gene_id=HG00140_ch_G0000119;Parent=HG00140_ch_T0000478;transcript_name=HG00140_ch_T0000478;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000478:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6352524	6358130	1000	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000479;gene_id=HG00140_ch_G0000119;Parent=HG00140_ch_G0000119;transcript_name=HG00140_ch_T0000479;gene_name=FAM197Y5;ID=HG00140_ch_T0000479;Name=FAM197Y5
HG00140_chrY	CAT	exon	6352524	6352625	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000479;gene_id=HG00140_ch_G0000119;Parent=HG00140_ch_T0000479;transcript_name=HG00140_ch_T0000479;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000479:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6352626	6352711	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000479;gene_id=HG00140_ch_G0000119;Parent=HG00140_ch_T0000479;transcript_name=HG00140_ch_T0000479;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000479:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6352712	6352857	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000479;gene_id=HG00140_ch_G0000119;Parent=HG00140_ch_T0000479;transcript_name=HG00140_ch_T0000479;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000479:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6352858	6354361	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000479;gene_id=HG00140_ch_G0000119;Parent=HG00140_ch_T0000479;transcript_name=HG00140_ch_T0000479;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000479:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6354362	6354520	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000479;gene_id=HG00140_ch_G0000119;Parent=HG00140_ch_T0000479;transcript_name=HG00140_ch_T0000479;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000479:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6354521	6358070	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000479;gene_id=HG00140_ch_G0000119;Parent=HG00140_ch_T0000479;transcript_name=HG00140_ch_T0000479;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000479:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6358071	6358130	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000479;gene_id=HG00140_ch_G0000119;Parent=HG00140_ch_T0000479;transcript_name=HG00140_ch_T0000479;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000479:3;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6367418	6370175	.	-	.	source_gene_common_name=TSPY3;source_gene=ENSG00000228927.10;gene_id=HG00140_ch_G0000120;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff;ID=HG00140_ch_G0000120;Name=TSPY3
HG00140_chrY	CAT	transcript	6367418	6370175	1000	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000480;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_G0000120;transcript_name=HG00140_ch_T0000480;gene_name=TSPY3;ID=HG00140_ch_T0000480;Name=TSPY3
HG00140_chrY	CAT	exon	6367418	6368202	.	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000480;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000480;transcript_name=HG00140_ch_T0000480;gene_name=TSPY3;ID=exon:HG00140_ch_T0000480:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6368203	6368329	.	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000480;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000480;transcript_name=HG00140_ch_T0000480;gene_name=TSPY3;ID=intron:HG00140_ch_T0000480:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6368330	6368876	.	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000480;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000480;transcript_name=HG00140_ch_T0000480;gene_name=TSPY3;ID=exon:HG00140_ch_T0000480:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6368877	6369004	.	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000480;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000480;transcript_name=HG00140_ch_T0000480;gene_name=TSPY3;ID=intron:HG00140_ch_T0000480:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6369005	6369082	.	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000480;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000480;transcript_name=HG00140_ch_T0000480;gene_name=TSPY3;ID=exon:HG00140_ch_T0000480:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6369083	6369689	.	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000480;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000480;transcript_name=HG00140_ch_T0000480;gene_name=TSPY3;ID=intron:HG00140_ch_T0000480:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6369690	6370175	.	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000480;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000480;transcript_name=HG00140_ch_T0000480;gene_name=TSPY3;ID=exon:HG00140_ch_T0000480:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6367424	6370221	100	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000481;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_G0000120;transcript_name=HG00140_ch_T0000481;gene_name=TSPY3;ID=HG00140_ch_T0000481;Name=TSPY3
HG00140_chrY	CAT	exon	6367424	6367635	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000481;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000481;transcript_name=HG00140_ch_T0000481;gene_name=TSPY3;ID=exon:HG00140_ch_T0000481:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6367613	6367635	.	-	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000481;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000481;transcript_name=HG00140_ch_T0000481;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000481:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6367613	6367615	.	-	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000481;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000481;transcript_name=HG00140_ch_T0000481;gene_name=TSPY3;ID=stop_codon:HG00140_ch_T0000481;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6367636	6368329	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000481;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000481;transcript_name=HG00140_ch_T0000481;gene_name=TSPY3;ID=intron:HG00140_ch_T0000481:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6368330	6368411	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000481;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000481;transcript_name=HG00140_ch_T0000481;gene_name=TSPY3;ID=exon:HG00140_ch_T0000481:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6368330	6368411	.	-	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000481;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000481;transcript_name=HG00140_ch_T0000481;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000481:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6368412	6368517	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000481;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000481;transcript_name=HG00140_ch_T0000481;gene_name=TSPY3;ID=intron:HG00140_ch_T0000481:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6368518	6368663	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000481;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000481;transcript_name=HG00140_ch_T0000481;gene_name=TSPY3;ID=exon:HG00140_ch_T0000481:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6368518	6368663	.	-	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000481;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000481;transcript_name=HG00140_ch_T0000481;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000481:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6368664	6368764	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000481;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000481;transcript_name=HG00140_ch_T0000481;gene_name=TSPY3;ID=intron:HG00140_ch_T0000481:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6368765	6368876	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000481;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000481;transcript_name=HG00140_ch_T0000481;gene_name=TSPY3;ID=exon:HG00140_ch_T0000481:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6368765	6368876	.	-	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000481;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000481;transcript_name=HG00140_ch_T0000481;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000481:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6368877	6369004	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000481;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000481;transcript_name=HG00140_ch_T0000481;gene_name=TSPY3;ID=intron:HG00140_ch_T0000481:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6369005	6369082	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000481;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000481;transcript_name=HG00140_ch_T0000481;gene_name=TSPY3;ID=exon:HG00140_ch_T0000481:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6369005	6369082	.	-	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000481;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000481;transcript_name=HG00140_ch_T0000481;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000481:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6369083	6369689	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000481;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000481;transcript_name=HG00140_ch_T0000481;gene_name=TSPY3;ID=intron:HG00140_ch_T0000481:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6369690	6370221	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000481;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000481;transcript_name=HG00140_ch_T0000481;gene_name=TSPY3;ID=exon:HG00140_ch_T0000481:5;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6369690	6370175	.	-	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000481;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000481;transcript_name=HG00140_ch_T0000481;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000481:5;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6370173	6370175	.	-	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000481;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000481;transcript_name=HG00140_ch_T0000481;gene_name=TSPY3;ID=start_codon:HG00140_ch_T0000481;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6367425	6370175	100	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000482;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_G0000120;transcript_name=HG00140_ch_T0000482;gene_name=TSPY3;ID=HG00140_ch_T0000482;Name=TSPY3
HG00140_chrY	CAT	exon	6367425	6367635	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000482;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000482;transcript_name=HG00140_ch_T0000482;gene_name=TSPY3;ID=exon:HG00140_ch_T0000482:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6367636	6368329	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000482;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000482;transcript_name=HG00140_ch_T0000482;gene_name=TSPY3;ID=intron:HG00140_ch_T0000482:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6368330	6368422	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000482;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000482;transcript_name=HG00140_ch_T0000482;gene_name=TSPY3;ID=exon:HG00140_ch_T0000482:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6368360	6368422	.	-	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000482;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000482;transcript_name=HG00140_ch_T0000482;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000482:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6368360	6368362	.	-	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000482;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000482;transcript_name=HG00140_ch_T0000482;gene_name=TSPY3;ID=stop_codon:HG00140_ch_T0000482;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6368423	6368517	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000482;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000482;transcript_name=HG00140_ch_T0000482;gene_name=TSPY3;ID=intron:HG00140_ch_T0000482:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6368518	6368663	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000482;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000482;transcript_name=HG00140_ch_T0000482;gene_name=TSPY3;ID=exon:HG00140_ch_T0000482:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6368518	6368663	.	-	2	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000482;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000482;transcript_name=HG00140_ch_T0000482;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000482:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6368664	6368764	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000482;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000482;transcript_name=HG00140_ch_T0000482;gene_name=TSPY3;ID=intron:HG00140_ch_T0000482:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6368765	6368876	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000482;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000482;transcript_name=HG00140_ch_T0000482;gene_name=TSPY3;ID=exon:HG00140_ch_T0000482:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6368765	6368876	.	-	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000482;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000482;transcript_name=HG00140_ch_T0000482;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000482:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6368877	6369004	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000482;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000482;transcript_name=HG00140_ch_T0000482;gene_name=TSPY3;ID=intron:HG00140_ch_T0000482:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6369005	6369082	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000482;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000482;transcript_name=HG00140_ch_T0000482;gene_name=TSPY3;ID=exon:HG00140_ch_T0000482:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6369005	6369082	.	-	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000482;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000482;transcript_name=HG00140_ch_T0000482;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000482:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6369083	6369689	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000482;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000482;transcript_name=HG00140_ch_T0000482;gene_name=TSPY3;ID=intron:HG00140_ch_T0000482:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6369690	6370175	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000482;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000482;transcript_name=HG00140_ch_T0000482;gene_name=TSPY3;ID=exon:HG00140_ch_T0000482:5;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6369690	6370175	.	-	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000482;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000482;transcript_name=HG00140_ch_T0000482;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000482:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6370173	6370175	.	-	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000482;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000482;transcript_name=HG00140_ch_T0000482;gene_name=TSPY3;ID=start_codon:HG00140_ch_T0000482;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6367433	6368815	1000	-	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000483;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_G0000120;transcript_name=HG00140_ch_T0000483;gene_name=TSPY3;ID=HG00140_ch_T0000483;Name=TSPY3
HG00140_chrY	CAT	exon	6367433	6367635	.	-	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000483;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000483;transcript_name=HG00140_ch_T0000483;gene_name=TSPY3;ID=exon:HG00140_ch_T0000483:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6367636	6368329	.	-	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000483;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000483;transcript_name=HG00140_ch_T0000483;gene_name=TSPY3;ID=intron:HG00140_ch_T0000483:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6368330	6368422	.	-	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000483;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000483;transcript_name=HG00140_ch_T0000483;gene_name=TSPY3;ID=exon:HG00140_ch_T0000483:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6368423	6368517	.	-	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000483;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000483;transcript_name=HG00140_ch_T0000483;gene_name=TSPY3;ID=intron:HG00140_ch_T0000483:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6368518	6368815	.	-	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000483;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000483;transcript_name=HG00140_ch_T0000483;gene_name=TSPY3;ID=exon:HG00140_ch_T0000483:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6367613	6370175	100	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000484;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_G0000120;transcript_name=HG00140_ch_T0000484;gene_name=TSPY3;ID=HG00140_ch_T0000484;Name=TSPY3
HG00140_chrY	CAT	exon	6367613	6367635	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000484;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000484;transcript_name=HG00140_ch_T0000484;gene_name=TSPY3;ID=exon:HG00140_ch_T0000484:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6367613	6367635	.	-	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000484;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000484;transcript_name=HG00140_ch_T0000484;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000484:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6367613	6367615	.	-	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000484;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000484;transcript_name=HG00140_ch_T0000484;gene_name=TSPY3;ID=stop_codon:HG00140_ch_T0000484;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6367636	6368329	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000484;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000484;transcript_name=HG00140_ch_T0000484;gene_name=TSPY3;ID=intron:HG00140_ch_T0000484:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6368330	6368411	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000484;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000484;transcript_name=HG00140_ch_T0000484;gene_name=TSPY3;ID=exon:HG00140_ch_T0000484:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6368330	6368411	.	-	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000484;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000484;transcript_name=HG00140_ch_T0000484;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000484:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6368412	6368517	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000484;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000484;transcript_name=HG00140_ch_T0000484;gene_name=TSPY3;ID=intron:HG00140_ch_T0000484:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6368518	6368663	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000484;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000484;transcript_name=HG00140_ch_T0000484;gene_name=TSPY3;ID=exon:HG00140_ch_T0000484:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6368518	6368663	.	-	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000484;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000484;transcript_name=HG00140_ch_T0000484;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000484:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6368664	6368764	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000484;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000484;transcript_name=HG00140_ch_T0000484;gene_name=TSPY3;ID=intron:HG00140_ch_T0000484:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6368765	6368876	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000484;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000484;transcript_name=HG00140_ch_T0000484;gene_name=TSPY3;ID=exon:HG00140_ch_T0000484:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6368765	6368876	.	-	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000484;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000484;transcript_name=HG00140_ch_T0000484;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000484:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6368877	6369004	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000484;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000484;transcript_name=HG00140_ch_T0000484;gene_name=TSPY3;ID=intron:HG00140_ch_T0000484:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6369005	6369082	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000484;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000484;transcript_name=HG00140_ch_T0000484;gene_name=TSPY3;ID=exon:HG00140_ch_T0000484:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6369005	6369082	.	-	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000484;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000484;transcript_name=HG00140_ch_T0000484;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000484:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6369083	6369689	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000484;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000484;transcript_name=HG00140_ch_T0000484;gene_name=TSPY3;ID=intron:HG00140_ch_T0000484:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6369690	6369827	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000484;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000484;transcript_name=HG00140_ch_T0000484;gene_name=TSPY3;ID=exon:HG00140_ch_T0000484:5;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6369690	6369827	.	-	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000484;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000484;transcript_name=HG00140_ch_T0000484;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000484:5;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6369828	6370088	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000484;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000484;transcript_name=HG00140_ch_T0000484;gene_name=TSPY3;ID=intron:HG00140_ch_T0000484:5;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6370089	6370175	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000484;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000484;transcript_name=HG00140_ch_T0000484;gene_name=TSPY3;ID=exon:HG00140_ch_T0000484:6;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6370089	6370175	.	-	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000484;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000484;transcript_name=HG00140_ch_T0000484;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000484:6;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6370173	6370175	.	-	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000484;gene_id=HG00140_ch_G0000120;Parent=HG00140_ch_T0000484;transcript_name=HG00140_ch_T0000484;gene_name=TSPY3;ID=start_codon:HG00140_ch_T0000484;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6371175	6373167	.	+	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_5;gene_id=HG00140_ch_G0000121;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG00140_ch_G0000121;Name=FAM197Y5
HG00140_chrY	CAT	transcript	6371175	6373167	1000	+	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000485;gene_id=HG00140_ch_G0000121;Parent=HG00140_ch_G0000121;transcript_name=HG00140_ch_T0000485;gene_name=FAM197Y5;ID=HG00140_ch_T0000485;Name=FAM197Y5
HG00140_chrY	CAT	exon	6371175	6371485	.	+	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000485;gene_id=HG00140_ch_G0000121;Parent=HG00140_ch_T0000485;transcript_name=HG00140_ch_T0000485;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000485:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6371486	6373021	.	+	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000485;gene_id=HG00140_ch_G0000121;Parent=HG00140_ch_T0000485;transcript_name=HG00140_ch_T0000485;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000485:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6373022	6373167	.	+	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000485;gene_id=HG00140_ch_G0000121;Parent=HG00140_ch_T0000485;transcript_name=HG00140_ch_T0000485;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000485:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6372822	6378568	.	+	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1_3;gene_id=HG00140_ch_G0000122;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG00140_ch_G0000122;Name=FAM197Y5
HG00140_chrY	CAT	transcript	6372822	6378568	1000	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000486;gene_id=HG00140_ch_G0000122;Parent=HG00140_ch_G0000122;transcript_name=HG00140_ch_T0000486;gene_name=FAM197Y5;ID=HG00140_ch_T0000486;Name=FAM197Y5
HG00140_chrY	CAT	exon	6372822	6372935	.	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000486;gene_id=HG00140_ch_G0000122;Parent=HG00140_ch_T0000486;transcript_name=HG00140_ch_T0000486;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000486:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6372936	6374742	.	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000486;gene_id=HG00140_ch_G0000122;Parent=HG00140_ch_T0000486;transcript_name=HG00140_ch_T0000486;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000486:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6374743	6374828	.	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000486;gene_id=HG00140_ch_G0000122;Parent=HG00140_ch_T0000486;transcript_name=HG00140_ch_T0000486;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000486:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6374829	6378378	.	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000486;gene_id=HG00140_ch_G0000122;Parent=HG00140_ch_T0000486;transcript_name=HG00140_ch_T0000486;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000486:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6378379	6378568	.	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000486;gene_id=HG00140_ch_G0000122;Parent=HG00140_ch_T0000486;transcript_name=HG00140_ch_T0000486;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000486:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6372834	6378438	1000	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000487;gene_id=HG00140_ch_G0000122;Parent=HG00140_ch_G0000122;transcript_name=HG00140_ch_T0000487;gene_name=FAM197Y5;ID=HG00140_ch_T0000487;Name=FAM197Y5
HG00140_chrY	CAT	exon	6372834	6372935	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000487;gene_id=HG00140_ch_G0000122;Parent=HG00140_ch_T0000487;transcript_name=HG00140_ch_T0000487;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000487:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6372936	6373021	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000487;gene_id=HG00140_ch_G0000122;Parent=HG00140_ch_T0000487;transcript_name=HG00140_ch_T0000487;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000487:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6373022	6373167	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000487;gene_id=HG00140_ch_G0000122;Parent=HG00140_ch_T0000487;transcript_name=HG00140_ch_T0000487;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000487:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6373168	6374669	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000487;gene_id=HG00140_ch_G0000122;Parent=HG00140_ch_T0000487;transcript_name=HG00140_ch_T0000487;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000487:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6374670	6374828	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000487;gene_id=HG00140_ch_G0000122;Parent=HG00140_ch_T0000487;transcript_name=HG00140_ch_T0000487;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000487:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6374829	6378378	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000487;gene_id=HG00140_ch_G0000122;Parent=HG00140_ch_T0000487;transcript_name=HG00140_ch_T0000487;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000487:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6378379	6378438	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000487;gene_id=HG00140_ch_G0000122;Parent=HG00140_ch_T0000487;transcript_name=HG00140_ch_T0000487;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000487:3;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6387703	6390505	.	-	.	source_gene_common_name=TSPY10;source_gene=ENSG00000236424.7;alternative_source_transcripts=ENST00000489397.1;gene_id=HG00140_ch_G0000123;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG00140_ch_G0000123;Name=TSPY10
HG00140_chrY	CAT	transcript	6387703	6390459	1000	-	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000489397.1;transcript_id=HG00140_ch_T0000488;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_G0000123;transcript_name=HG00140_ch_T0000488;gene_name=TSPY10;ID=HG00140_ch_T0000488;Name=TSPY10
HG00140_chrY	CAT	exon	6387703	6388486	.	-	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000489397.1;transcript_id=HG00140_ch_T0000488;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_T0000488;transcript_name=HG00140_ch_T0000488;gene_name=TSPY10;ID=exon:HG00140_ch_T0000488:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6388487	6388613	.	-	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000489397.1;transcript_id=HG00140_ch_T0000488;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_T0000488;transcript_name=HG00140_ch_T0000488;gene_name=TSPY10;ID=intron:HG00140_ch_T0000488:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6388614	6389160	.	-	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000489397.1;transcript_id=HG00140_ch_T0000488;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_T0000488;transcript_name=HG00140_ch_T0000488;gene_name=TSPY10;ID=exon:HG00140_ch_T0000488:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6389161	6389288	.	-	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000489397.1;transcript_id=HG00140_ch_T0000488;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_T0000488;transcript_name=HG00140_ch_T0000488;gene_name=TSPY10;ID=intron:HG00140_ch_T0000488:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6389289	6389366	.	-	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000489397.1;transcript_id=HG00140_ch_T0000488;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_T0000488;transcript_name=HG00140_ch_T0000488;gene_name=TSPY10;ID=exon:HG00140_ch_T0000488:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6389367	6389973	.	-	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000489397.1;transcript_id=HG00140_ch_T0000488;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_T0000488;transcript_name=HG00140_ch_T0000488;gene_name=TSPY10;ID=intron:HG00140_ch_T0000488:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6389974	6390459	.	-	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000489397.1;transcript_id=HG00140_ch_T0000488;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_T0000488;transcript_name=HG00140_ch_T0000488;gene_name=TSPY10;ID=exon:HG00140_ch_T0000488:3;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6387709	6390505	100	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00140_ch_T0000489;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_G0000123;transcript_name=HG00140_ch_T0000489;gene_name=TSPY10;ID=HG00140_ch_T0000489;Name=TSPY10
HG00140_chrY	CAT	exon	6387709	6387919	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00140_ch_T0000489;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_T0000489;transcript_name=HG00140_ch_T0000489;gene_name=TSPY10;ID=exon:HG00140_ch_T0000489:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6387897	6387919	.	-	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00140_ch_T0000489;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_T0000489;transcript_name=HG00140_ch_T0000489;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000489:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6387897	6387899	.	-	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00140_ch_T0000489;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_T0000489;transcript_name=HG00140_ch_T0000489;gene_name=TSPY10;ID=stop_codon:HG00140_ch_T0000489;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6387920	6388613	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00140_ch_T0000489;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_T0000489;transcript_name=HG00140_ch_T0000489;gene_name=TSPY10;ID=intron:HG00140_ch_T0000489:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6388614	6388695	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00140_ch_T0000489;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_T0000489;transcript_name=HG00140_ch_T0000489;gene_name=TSPY10;ID=exon:HG00140_ch_T0000489:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6388614	6388695	.	-	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00140_ch_T0000489;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_T0000489;transcript_name=HG00140_ch_T0000489;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000489:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6388696	6388801	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00140_ch_T0000489;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_T0000489;transcript_name=HG00140_ch_T0000489;gene_name=TSPY10;ID=intron:HG00140_ch_T0000489:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6388802	6388947	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00140_ch_T0000489;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_T0000489;transcript_name=HG00140_ch_T0000489;gene_name=TSPY10;ID=exon:HG00140_ch_T0000489:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6388802	6388947	.	-	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00140_ch_T0000489;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_T0000489;transcript_name=HG00140_ch_T0000489;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000489:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6388948	6389048	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00140_ch_T0000489;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_T0000489;transcript_name=HG00140_ch_T0000489;gene_name=TSPY10;ID=intron:HG00140_ch_T0000489:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6389049	6389160	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00140_ch_T0000489;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_T0000489;transcript_name=HG00140_ch_T0000489;gene_name=TSPY10;ID=exon:HG00140_ch_T0000489:3;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6389049	6389160	.	-	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00140_ch_T0000489;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_T0000489;transcript_name=HG00140_ch_T0000489;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000489:3;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6389161	6389288	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00140_ch_T0000489;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_T0000489;transcript_name=HG00140_ch_T0000489;gene_name=TSPY10;ID=intron:HG00140_ch_T0000489:3;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6389289	6389366	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00140_ch_T0000489;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_T0000489;transcript_name=HG00140_ch_T0000489;gene_name=TSPY10;ID=exon:HG00140_ch_T0000489:4;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6389289	6389366	.	-	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00140_ch_T0000489;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_T0000489;transcript_name=HG00140_ch_T0000489;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000489:4;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6389367	6389973	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00140_ch_T0000489;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_T0000489;transcript_name=HG00140_ch_T0000489;gene_name=TSPY10;ID=intron:HG00140_ch_T0000489:4;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6389974	6390505	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00140_ch_T0000489;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_T0000489;transcript_name=HG00140_ch_T0000489;gene_name=TSPY10;ID=exon:HG00140_ch_T0000489:5;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6389974	6390459	.	-	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00140_ch_T0000489;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_T0000489;transcript_name=HG00140_ch_T0000489;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000489:5;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6390457	6390459	.	-	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000428845.6;transcript_id=HG00140_ch_T0000489;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_T0000489;transcript_name=HG00140_ch_T0000489;gene_name=TSPY10;ID=start_codon:HG00140_ch_T0000489;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6387710	6390459	100	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00140_ch_T0000490;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_G0000123;transcript_name=HG00140_ch_T0000490;gene_name=TSPY10;ID=HG00140_ch_T0000490;Name=TSPY10
HG00140_chrY	CAT	exon	6387710	6387919	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00140_ch_T0000490;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_T0000490;transcript_name=HG00140_ch_T0000490;gene_name=TSPY10;ID=exon:HG00140_ch_T0000490:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6387920	6388613	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00140_ch_T0000490;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_T0000490;transcript_name=HG00140_ch_T0000490;gene_name=TSPY10;ID=intron:HG00140_ch_T0000490:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6388614	6388706	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00140_ch_T0000490;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_T0000490;transcript_name=HG00140_ch_T0000490;gene_name=TSPY10;ID=exon:HG00140_ch_T0000490:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6388644	6388706	.	-	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00140_ch_T0000490;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_T0000490;transcript_name=HG00140_ch_T0000490;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000490:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6388644	6388646	.	-	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00140_ch_T0000490;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_T0000490;transcript_name=HG00140_ch_T0000490;gene_name=TSPY10;ID=stop_codon:HG00140_ch_T0000490;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6388707	6388801	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00140_ch_T0000490;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_T0000490;transcript_name=HG00140_ch_T0000490;gene_name=TSPY10;ID=intron:HG00140_ch_T0000490:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6388802	6388947	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00140_ch_T0000490;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_T0000490;transcript_name=HG00140_ch_T0000490;gene_name=TSPY10;ID=exon:HG00140_ch_T0000490:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6388802	6388947	.	-	2	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00140_ch_T0000490;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_T0000490;transcript_name=HG00140_ch_T0000490;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000490:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6388948	6389048	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00140_ch_T0000490;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_T0000490;transcript_name=HG00140_ch_T0000490;gene_name=TSPY10;ID=intron:HG00140_ch_T0000490:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6389049	6389160	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00140_ch_T0000490;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_T0000490;transcript_name=HG00140_ch_T0000490;gene_name=TSPY10;ID=exon:HG00140_ch_T0000490:3;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6389049	6389160	.	-	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00140_ch_T0000490;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_T0000490;transcript_name=HG00140_ch_T0000490;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000490:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6389161	6389288	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00140_ch_T0000490;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_T0000490;transcript_name=HG00140_ch_T0000490;gene_name=TSPY10;ID=intron:HG00140_ch_T0000490:3;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6389289	6389366	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00140_ch_T0000490;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_T0000490;transcript_name=HG00140_ch_T0000490;gene_name=TSPY10;ID=exon:HG00140_ch_T0000490:4;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6389289	6389366	.	-	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00140_ch_T0000490;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_T0000490;transcript_name=HG00140_ch_T0000490;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000490:3;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6389367	6389973	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00140_ch_T0000490;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_T0000490;transcript_name=HG00140_ch_T0000490;gene_name=TSPY10;ID=intron:HG00140_ch_T0000490:4;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6389974	6390459	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00140_ch_T0000490;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_T0000490;transcript_name=HG00140_ch_T0000490;gene_name=TSPY10;ID=exon:HG00140_ch_T0000490:5;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6389974	6390459	.	-	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00140_ch_T0000490;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_T0000490;transcript_name=HG00140_ch_T0000490;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000490:4;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6390457	6390459	.	-	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00140_ch_T0000490;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_T0000490;transcript_name=HG00140_ch_T0000490;gene_name=TSPY10;ID=start_codon:HG00140_ch_T0000490;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6387718	6389099	1000	-	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000495839.1;transcript_id=HG00140_ch_T0000491;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_G0000123;transcript_name=HG00140_ch_T0000491;gene_name=TSPY10;ID=HG00140_ch_T0000491;Name=TSPY10
HG00140_chrY	CAT	exon	6387718	6387919	.	-	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000495839.1;transcript_id=HG00140_ch_T0000491;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_T0000491;transcript_name=HG00140_ch_T0000491;gene_name=TSPY10;ID=exon:HG00140_ch_T0000491:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6387920	6388613	.	-	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000495839.1;transcript_id=HG00140_ch_T0000491;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_T0000491;transcript_name=HG00140_ch_T0000491;gene_name=TSPY10;ID=intron:HG00140_ch_T0000491:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6388614	6388695	.	-	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000495839.1;transcript_id=HG00140_ch_T0000491;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_T0000491;transcript_name=HG00140_ch_T0000491;gene_name=TSPY10;ID=exon:HG00140_ch_T0000491:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6388696	6388801	.	-	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000495839.1;transcript_id=HG00140_ch_T0000491;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_T0000491;transcript_name=HG00140_ch_T0000491;gene_name=TSPY10;ID=intron:HG00140_ch_T0000491:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6388802	6389099	.	-	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000495839.1;transcript_id=HG00140_ch_T0000491;gene_id=HG00140_ch_G0000123;Parent=HG00140_ch_T0000491;transcript_name=HG00140_ch_T0000491;gene_name=TSPY10;ID=exon:HG00140_ch_T0000491:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6391459	6393451	.	+	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_2;gene_id=HG00140_ch_G0000124;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG00140_ch_G0000124;Name=FAM197Y5
HG00140_chrY	CAT	transcript	6391459	6393451	1000	+	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000492;gene_id=HG00140_ch_G0000124;Parent=HG00140_ch_G0000124;transcript_name=HG00140_ch_T0000492;gene_name=FAM197Y5;ID=HG00140_ch_T0000492;Name=FAM197Y5
HG00140_chrY	CAT	exon	6391459	6391769	.	+	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000492;gene_id=HG00140_ch_G0000124;Parent=HG00140_ch_T0000492;transcript_name=HG00140_ch_T0000492;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000492:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6391770	6393305	.	+	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000492;gene_id=HG00140_ch_G0000124;Parent=HG00140_ch_T0000492;transcript_name=HG00140_ch_T0000492;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000492:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6393306	6393451	.	+	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000492;gene_id=HG00140_ch_G0000124;Parent=HG00140_ch_T0000492;transcript_name=HG00140_ch_T0000492;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000492:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6393106	6398844	.	+	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1_2;gene_id=HG00140_ch_G0000125;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG00140_ch_G0000125;Name=FAM197Y5
HG00140_chrY	CAT	transcript	6393106	6398844	1000	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000493;gene_id=HG00140_ch_G0000125;Parent=HG00140_ch_G0000125;transcript_name=HG00140_ch_T0000493;gene_name=FAM197Y5;ID=HG00140_ch_T0000493;Name=FAM197Y5
HG00140_chrY	CAT	exon	6393106	6393219	.	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000493;gene_id=HG00140_ch_G0000125;Parent=HG00140_ch_T0000493;transcript_name=HG00140_ch_T0000493;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000493:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6393220	6395018	.	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000493;gene_id=HG00140_ch_G0000125;Parent=HG00140_ch_T0000493;transcript_name=HG00140_ch_T0000493;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000493:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6395019	6395104	.	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000493;gene_id=HG00140_ch_G0000125;Parent=HG00140_ch_T0000493;transcript_name=HG00140_ch_T0000493;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000493:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6395105	6398654	.	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000493;gene_id=HG00140_ch_G0000125;Parent=HG00140_ch_T0000493;transcript_name=HG00140_ch_T0000493;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000493:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6398655	6398844	.	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000493;gene_id=HG00140_ch_G0000125;Parent=HG00140_ch_T0000493;transcript_name=HG00140_ch_T0000493;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000493:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6393118	6398714	1000	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000494;gene_id=HG00140_ch_G0000125;Parent=HG00140_ch_G0000125;transcript_name=HG00140_ch_T0000494;gene_name=FAM197Y5;ID=HG00140_ch_T0000494;Name=FAM197Y5
HG00140_chrY	CAT	exon	6393118	6393219	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000494;gene_id=HG00140_ch_G0000125;Parent=HG00140_ch_T0000494;transcript_name=HG00140_ch_T0000494;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000494:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6393220	6393305	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000494;gene_id=HG00140_ch_G0000125;Parent=HG00140_ch_T0000494;transcript_name=HG00140_ch_T0000494;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000494:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6393306	6393451	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000494;gene_id=HG00140_ch_G0000125;Parent=HG00140_ch_T0000494;transcript_name=HG00140_ch_T0000494;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000494:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6393452	6394945	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000494;gene_id=HG00140_ch_G0000125;Parent=HG00140_ch_T0000494;transcript_name=HG00140_ch_T0000494;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000494:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6394946	6395104	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000494;gene_id=HG00140_ch_G0000125;Parent=HG00140_ch_T0000494;transcript_name=HG00140_ch_T0000494;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000494:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6395105	6398654	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000494;gene_id=HG00140_ch_G0000125;Parent=HG00140_ch_T0000494;transcript_name=HG00140_ch_T0000494;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000494:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6398655	6398714	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000494;gene_id=HG00140_ch_G0000125;Parent=HG00140_ch_T0000494;transcript_name=HG00140_ch_T0000494;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000494:3;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6407972	6410777	.	-	.	source_gene_common_name=ENSG00000301844;source_gene=ENSG00000301844.1_2;gene_id=HG00140_ch_G0000126;gene_biotype=lncRNA;gene_name=ENSG00000301844;gene_sources=liftoff;ID=HG00140_ch_G0000126;Name=ENSG00000301844
HG00140_chrY	CAT	transcript	6407972	6410777	1000	-	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000495;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_G0000126;transcript_name=HG00140_ch_T0000495;gene_name=ENSG00000301844;ID=HG00140_ch_T0000495;Name=ENSG00000301844
HG00140_chrY	CAT	exon	6407972	6408194	.	-	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000495;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000495;transcript_name=HG00140_ch_T0000495;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000495:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6408195	6408888	.	-	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000495;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000495;transcript_name=HG00140_ch_T0000495;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000495:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6408889	6408970	.	-	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000495;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000495;transcript_name=HG00140_ch_T0000495;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000495:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6408971	6409076	.	-	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000495;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000495;transcript_name=HG00140_ch_T0000495;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000495:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6409077	6409222	.	-	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000495;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000495;transcript_name=HG00140_ch_T0000495;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000495:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6409223	6409323	.	-	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000495;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000495;transcript_name=HG00140_ch_T0000495;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000495:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6409324	6409435	.	-	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000495;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000495;transcript_name=HG00140_ch_T0000495;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000495:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6409436	6409563	.	-	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000495;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000495;transcript_name=HG00140_ch_T0000495;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000495:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6409564	6409641	.	-	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000495;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000495;transcript_name=HG00140_ch_T0000495;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000495:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6409642	6410248	.	-	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000495;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000495;transcript_name=HG00140_ch_T0000495;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000495:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6410249	6410777	.	-	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000495;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000495;transcript_name=HG00140_ch_T0000495;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000495:5;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6407977	6410768	1000	-	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000496;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_G0000126;transcript_name=HG00140_ch_T0000496;gene_name=ENSG00000301844;ID=HG00140_ch_T0000496;Name=ENSG00000301844
HG00140_chrY	CAT	exon	6407977	6408194	.	-	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000496;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000496;transcript_name=HG00140_ch_T0000496;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000496:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6408195	6408888	.	-	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000496;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000496;transcript_name=HG00140_ch_T0000496;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000496:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6408889	6408970	.	-	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000496;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000496;transcript_name=HG00140_ch_T0000496;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000496:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6408971	6409076	.	-	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000496;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000496;transcript_name=HG00140_ch_T0000496;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000496:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6409077	6409215	.	-	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000496;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000496;transcript_name=HG00140_ch_T0000496;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000496:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6409216	6409323	.	-	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000496;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000496;transcript_name=HG00140_ch_T0000496;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000496:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6409324	6409435	.	-	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000496;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000496;transcript_name=HG00140_ch_T0000496;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000496:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6409436	6409563	.	-	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000496;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000496;transcript_name=HG00140_ch_T0000496;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000496:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6409564	6409641	.	-	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000496;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000496;transcript_name=HG00140_ch_T0000496;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000496:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6409642	6410248	.	-	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000496;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000496;transcript_name=HG00140_ch_T0000496;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000496:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6410249	6410768	.	-	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000496;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000496;transcript_name=HG00140_ch_T0000496;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000496:5;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6407977	6410714	1000	-	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000497;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_G0000126;transcript_name=HG00140_ch_T0000497;gene_name=ENSG00000301844;ID=HG00140_ch_T0000497;Name=ENSG00000301844
HG00140_chrY	CAT	exon	6407977	6408194	.	-	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000497;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000497;transcript_name=HG00140_ch_T0000497;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000497:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6408195	6408888	.	-	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000497;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000497;transcript_name=HG00140_ch_T0000497;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000497:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6408889	6408981	.	-	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000497;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000497;transcript_name=HG00140_ch_T0000497;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000497:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6408982	6409076	.	-	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000497;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000497;transcript_name=HG00140_ch_T0000497;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000497:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6409077	6409435	.	-	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000497;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000497;transcript_name=HG00140_ch_T0000497;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000497:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6409436	6409563	.	-	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000497;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000497;transcript_name=HG00140_ch_T0000497;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000497:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6409564	6409641	.	-	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000497;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000497;transcript_name=HG00140_ch_T0000497;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000497:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6409642	6410248	.	-	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000497;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000497;transcript_name=HG00140_ch_T0000497;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000497:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6410249	6410714	.	-	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000497;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000497;transcript_name=HG00140_ch_T0000497;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000497:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6407977	6410736	1000	-	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000498;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_G0000126;transcript_name=HG00140_ch_T0000498;gene_name=ENSG00000301844;ID=HG00140_ch_T0000498;Name=ENSG00000301844
HG00140_chrY	CAT	exon	6407977	6408194	.	-	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000498;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000498;transcript_name=HG00140_ch_T0000498;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000498:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6408195	6408888	.	-	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000498;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000498;transcript_name=HG00140_ch_T0000498;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000498:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6408889	6408970	.	-	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000498;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000498;transcript_name=HG00140_ch_T0000498;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000498:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6408971	6409076	.	-	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000498;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000498;transcript_name=HG00140_ch_T0000498;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000498:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6409077	6409435	.	-	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000498;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000498;transcript_name=HG00140_ch_T0000498;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000498:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6409436	6409563	.	-	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000498;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000498;transcript_name=HG00140_ch_T0000498;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000498:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6409564	6409641	.	-	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000498;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000498;transcript_name=HG00140_ch_T0000498;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000498:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6409642	6410248	.	-	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000498;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000498;transcript_name=HG00140_ch_T0000498;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000498:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6410249	6410736	.	-	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000498;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000498;transcript_name=HG00140_ch_T0000498;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000498:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6407977	6410734	1000	-	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000499;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_G0000126;transcript_name=HG00140_ch_T0000499;gene_name=ENSG00000301844;ID=HG00140_ch_T0000499;Name=ENSG00000301844
HG00140_chrY	CAT	exon	6407977	6408194	.	-	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000499;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000499;transcript_name=HG00140_ch_T0000499;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000499:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6408195	6408888	.	-	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000499;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000499;transcript_name=HG00140_ch_T0000499;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000499:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6408889	6408981	.	-	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000499;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000499;transcript_name=HG00140_ch_T0000499;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000499:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6408982	6409076	.	-	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000499;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000499;transcript_name=HG00140_ch_T0000499;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000499:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6409077	6409222	.	-	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000499;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000499;transcript_name=HG00140_ch_T0000499;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000499:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6409223	6409323	.	-	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000499;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000499;transcript_name=HG00140_ch_T0000499;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000499:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6409324	6409435	.	-	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000499;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000499;transcript_name=HG00140_ch_T0000499;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000499:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6409436	6409563	.	-	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000499;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000499;transcript_name=HG00140_ch_T0000499;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000499:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6409564	6409641	.	-	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000499;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000499;transcript_name=HG00140_ch_T0000499;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000499:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6409642	6410248	.	-	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000499;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000499;transcript_name=HG00140_ch_T0000499;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000499:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6410249	6410734	.	-	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000499;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000499;transcript_name=HG00140_ch_T0000499;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000499:5;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6407982	6410746	1000	-	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000500;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_G0000126;transcript_name=HG00140_ch_T0000500;gene_name=ENSG00000301844;ID=HG00140_ch_T0000500;Name=ENSG00000301844
HG00140_chrY	CAT	exon	6407982	6408194	.	-	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000500;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000500;transcript_name=HG00140_ch_T0000500;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000500:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6408195	6408888	.	-	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000500;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000500;transcript_name=HG00140_ch_T0000500;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000500:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6408889	6409222	.	-	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000500;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000500;transcript_name=HG00140_ch_T0000500;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000500:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6409223	6409323	.	-	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000500;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000500;transcript_name=HG00140_ch_T0000500;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000500:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6409324	6409435	.	-	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000500;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000500;transcript_name=HG00140_ch_T0000500;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000500:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6409436	6409563	.	-	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000500;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000500;transcript_name=HG00140_ch_T0000500;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000500:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6409564	6409641	.	-	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000500;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000500;transcript_name=HG00140_ch_T0000500;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000500:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6409642	6410248	.	-	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000500;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000500;transcript_name=HG00140_ch_T0000500;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000500:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6410249	6410746	.	-	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000500;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000500;transcript_name=HG00140_ch_T0000500;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000500:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6407984	6410734	1000	-	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000501;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_G0000126;transcript_name=HG00140_ch_T0000501;gene_name=ENSG00000301844;ID=HG00140_ch_T0000501;Name=ENSG00000301844
HG00140_chrY	CAT	exon	6407984	6408194	.	-	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000501;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000501;transcript_name=HG00140_ch_T0000501;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000501:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6408195	6408888	.	-	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000501;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000501;transcript_name=HG00140_ch_T0000501;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000501:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6408889	6409435	.	-	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000501;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000501;transcript_name=HG00140_ch_T0000501;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000501:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6409436	6409563	.	-	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000501;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000501;transcript_name=HG00140_ch_T0000501;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000501:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6409564	6409641	.	-	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000501;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000501;transcript_name=HG00140_ch_T0000501;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000501:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6409642	6410248	.	-	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000501;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000501;transcript_name=HG00140_ch_T0000501;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000501:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6410249	6410734	.	-	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000501;gene_id=HG00140_ch_G0000126;Parent=HG00140_ch_T0000501;transcript_name=HG00140_ch_T0000501;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000501:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6407984	6410734	.	-	.	source_gene_common_name=TSPY7P;source_gene=ENSG00000188656.8_3;gene_id=HG00140_ch_G0000127;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY7P;gene_sources=liftoff;ID=HG00140_ch_G0000127;Name=TSPY7P
HG00140_chrY	CAT	transcript	6407984	6410734	1000	-	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00140_ch_T0000502;gene_id=HG00140_ch_G0000127;Parent=HG00140_ch_G0000127;transcript_name=HG00140_ch_T0000502;gene_name=TSPY7P;ID=HG00140_ch_T0000502;Name=TSPY7P
HG00140_chrY	CAT	exon	6407984	6408194	.	-	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00140_ch_T0000502;gene_id=HG00140_ch_G0000127;Parent=HG00140_ch_T0000502;transcript_name=HG00140_ch_T0000502;gene_name=TSPY7P;ID=exon:HG00140_ch_T0000502:0;Name=TSPY7P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6408195	6408888	.	-	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00140_ch_T0000502;gene_id=HG00140_ch_G0000127;Parent=HG00140_ch_T0000502;transcript_name=HG00140_ch_T0000502;gene_name=TSPY7P;ID=intron:HG00140_ch_T0000502:0;Name=TSPY7P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6408889	6408970	.	-	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00140_ch_T0000502;gene_id=HG00140_ch_G0000127;Parent=HG00140_ch_T0000502;transcript_name=HG00140_ch_T0000502;gene_name=TSPY7P;ID=exon:HG00140_ch_T0000502:1;Name=TSPY7P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6408971	6409076	.	-	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00140_ch_T0000502;gene_id=HG00140_ch_G0000127;Parent=HG00140_ch_T0000502;transcript_name=HG00140_ch_T0000502;gene_name=TSPY7P;ID=intron:HG00140_ch_T0000502:1;Name=TSPY7P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6409077	6409222	.	-	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00140_ch_T0000502;gene_id=HG00140_ch_G0000127;Parent=HG00140_ch_T0000502;transcript_name=HG00140_ch_T0000502;gene_name=TSPY7P;ID=exon:HG00140_ch_T0000502:2;Name=TSPY7P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6409223	6409323	.	-	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00140_ch_T0000502;gene_id=HG00140_ch_G0000127;Parent=HG00140_ch_T0000502;transcript_name=HG00140_ch_T0000502;gene_name=TSPY7P;ID=intron:HG00140_ch_T0000502:2;Name=TSPY7P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6409324	6409435	.	-	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00140_ch_T0000502;gene_id=HG00140_ch_G0000127;Parent=HG00140_ch_T0000502;transcript_name=HG00140_ch_T0000502;gene_name=TSPY7P;ID=exon:HG00140_ch_T0000502:3;Name=TSPY7P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6409436	6409563	.	-	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00140_ch_T0000502;gene_id=HG00140_ch_G0000127;Parent=HG00140_ch_T0000502;transcript_name=HG00140_ch_T0000502;gene_name=TSPY7P;ID=intron:HG00140_ch_T0000502:3;Name=TSPY7P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6409564	6409641	.	-	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00140_ch_T0000502;gene_id=HG00140_ch_G0000127;Parent=HG00140_ch_T0000502;transcript_name=HG00140_ch_T0000502;gene_name=TSPY7P;ID=exon:HG00140_ch_T0000502:4;Name=TSPY7P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6409642	6410248	.	-	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00140_ch_T0000502;gene_id=HG00140_ch_G0000127;Parent=HG00140_ch_T0000502;transcript_name=HG00140_ch_T0000502;gene_name=TSPY7P;ID=intron:HG00140_ch_T0000502:4;Name=TSPY7P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6410249	6410734	.	-	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00140_ch_T0000502;gene_id=HG00140_ch_G0000127;Parent=HG00140_ch_T0000502;transcript_name=HG00140_ch_T0000502;gene_name=TSPY7P;ID=exon:HG00140_ch_T0000502:5;Name=TSPY7P;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6411733	6413726	.	+	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000234830.9_2;gene_id=HG00140_ch_G0000128;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG00140_ch_G0000128;Name=FAM197Y9
HG00140_chrY	CAT	transcript	6411733	6413726	1000	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000503;gene_id=HG00140_ch_G0000128;Parent=HG00140_ch_G0000128;transcript_name=HG00140_ch_T0000503;gene_name=FAM197Y9;ID=HG00140_ch_T0000503;Name=FAM197Y9
HG00140_chrY	CAT	exon	6411733	6412042	.	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000503;gene_id=HG00140_ch_G0000128;Parent=HG00140_ch_T0000503;transcript_name=HG00140_ch_T0000503;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000503:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6412043	6413384	.	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000503;gene_id=HG00140_ch_G0000128;Parent=HG00140_ch_T0000503;transcript_name=HG00140_ch_T0000503;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000503:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6413385	6413468	.	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000503;gene_id=HG00140_ch_G0000128;Parent=HG00140_ch_T0000503;transcript_name=HG00140_ch_T0000503;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000503:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6413469	6413580	.	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000503;gene_id=HG00140_ch_G0000128;Parent=HG00140_ch_T0000503;transcript_name=HG00140_ch_T0000503;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000503:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6413581	6413726	.	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000503;gene_id=HG00140_ch_G0000128;Parent=HG00140_ch_T0000503;transcript_name=HG00140_ch_T0000503;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000503:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6413375	6421062	.	+	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000290448.1_5;gene_id=HG00140_ch_G0000129;gene_biotype=lncRNA;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG00140_ch_G0000129;Name=FAM197Y9
HG00140_chrY	CAT	transcript	6413375	6421062	1000	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000504;gene_id=HG00140_ch_G0000129;Parent=HG00140_ch_G0000129;transcript_name=HG00140_ch_T0000504;gene_name=FAM197Y9;ID=HG00140_ch_T0000504;Name=FAM197Y9
HG00140_chrY	CAT	exon	6413375	6413494	.	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000504;gene_id=HG00140_ch_G0000129;Parent=HG00140_ch_T0000504;transcript_name=HG00140_ch_T0000504;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000504:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6413495	6415297	.	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000504;gene_id=HG00140_ch_G0000129;Parent=HG00140_ch_T0000504;transcript_name=HG00140_ch_T0000504;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000504:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6415298	6415383	.	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000504;gene_id=HG00140_ch_G0000129;Parent=HG00140_ch_T0000504;transcript_name=HG00140_ch_T0000504;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000504:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6415384	6418934	.	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000504;gene_id=HG00140_ch_G0000129;Parent=HG00140_ch_T0000504;transcript_name=HG00140_ch_T0000504;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000504:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6418935	6421062	.	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000504;gene_id=HG00140_ch_G0000129;Parent=HG00140_ch_T0000504;transcript_name=HG00140_ch_T0000504;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000504:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6413393	6418994	1000	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000505;gene_id=HG00140_ch_G0000129;Parent=HG00140_ch_G0000129;transcript_name=HG00140_ch_T0000505;gene_name=FAM197Y9;ID=HG00140_ch_T0000505;Name=FAM197Y9
HG00140_chrY	CAT	exon	6413393	6413494	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000505;gene_id=HG00140_ch_G0000129;Parent=HG00140_ch_T0000505;transcript_name=HG00140_ch_T0000505;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000505:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6413495	6413580	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000505;gene_id=HG00140_ch_G0000129;Parent=HG00140_ch_T0000505;transcript_name=HG00140_ch_T0000505;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000505:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6413581	6413726	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000505;gene_id=HG00140_ch_G0000129;Parent=HG00140_ch_T0000505;transcript_name=HG00140_ch_T0000505;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000505:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6413727	6415224	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000505;gene_id=HG00140_ch_G0000129;Parent=HG00140_ch_T0000505;transcript_name=HG00140_ch_T0000505;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000505:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6415225	6415383	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000505;gene_id=HG00140_ch_G0000129;Parent=HG00140_ch_T0000505;transcript_name=HG00140_ch_T0000505;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000505:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6415384	6418934	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000505;gene_id=HG00140_ch_G0000129;Parent=HG00140_ch_T0000505;transcript_name=HG00140_ch_T0000505;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000505:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6418935	6418994	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000505;gene_id=HG00140_ch_G0000129;Parent=HG00140_ch_T0000505;transcript_name=HG00140_ch_T0000505;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000505:3;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6428259	6431061	.	-	.	source_gene_common_name=TSPY10;source_gene=ENSG00000236424.7;gene_id=HG00140_ch_G0000130;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG00140_ch_G0000130;Name=TSPY10
HG00140_chrY	CAT	transcript	6428259	6431015	1000	-	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000506;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_G0000130;transcript_name=HG00140_ch_T0000506;gene_name=TSPY10;ID=HG00140_ch_T0000506;Name=TSPY10
HG00140_chrY	CAT	exon	6428259	6429042	.	-	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000506;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_T0000506;transcript_name=HG00140_ch_T0000506;gene_name=TSPY10;ID=exon:HG00140_ch_T0000506:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6429043	6429169	.	-	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000506;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_T0000506;transcript_name=HG00140_ch_T0000506;gene_name=TSPY10;ID=intron:HG00140_ch_T0000506:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6429170	6429716	.	-	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000506;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_T0000506;transcript_name=HG00140_ch_T0000506;gene_name=TSPY10;ID=exon:HG00140_ch_T0000506:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6429717	6429844	.	-	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000506;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_T0000506;transcript_name=HG00140_ch_T0000506;gene_name=TSPY10;ID=intron:HG00140_ch_T0000506:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6429845	6429922	.	-	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000506;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_T0000506;transcript_name=HG00140_ch_T0000506;gene_name=TSPY10;ID=exon:HG00140_ch_T0000506:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6429923	6430529	.	-	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000506;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_T0000506;transcript_name=HG00140_ch_T0000506;gene_name=TSPY10;ID=intron:HG00140_ch_T0000506:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6430530	6431015	.	-	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000506;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_T0000506;transcript_name=HG00140_ch_T0000506;gene_name=TSPY10;ID=exon:HG00140_ch_T0000506:3;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6428265	6431061	100	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000507;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_G0000130;transcript_name=HG00140_ch_T0000507;gene_name=TSPY10;ID=HG00140_ch_T0000507;Name=TSPY10
HG00140_chrY	CAT	exon	6428265	6428475	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000507;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_T0000507;transcript_name=HG00140_ch_T0000507;gene_name=TSPY10;ID=exon:HG00140_ch_T0000507:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6428453	6428475	.	-	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000507;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_T0000507;transcript_name=HG00140_ch_T0000507;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000507:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6428453	6428455	.	-	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000507;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_T0000507;transcript_name=HG00140_ch_T0000507;gene_name=TSPY10;ID=stop_codon:HG00140_ch_T0000507;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6428476	6429169	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000507;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_T0000507;transcript_name=HG00140_ch_T0000507;gene_name=TSPY10;ID=intron:HG00140_ch_T0000507:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6429170	6429251	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000507;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_T0000507;transcript_name=HG00140_ch_T0000507;gene_name=TSPY10;ID=exon:HG00140_ch_T0000507:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6429170	6429251	.	-	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000507;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_T0000507;transcript_name=HG00140_ch_T0000507;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000507:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6429252	6429357	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000507;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_T0000507;transcript_name=HG00140_ch_T0000507;gene_name=TSPY10;ID=intron:HG00140_ch_T0000507:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6429358	6429503	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000507;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_T0000507;transcript_name=HG00140_ch_T0000507;gene_name=TSPY10;ID=exon:HG00140_ch_T0000507:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6429358	6429503	.	-	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000507;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_T0000507;transcript_name=HG00140_ch_T0000507;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000507:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6429504	6429604	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000507;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_T0000507;transcript_name=HG00140_ch_T0000507;gene_name=TSPY10;ID=intron:HG00140_ch_T0000507:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6429605	6429716	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000507;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_T0000507;transcript_name=HG00140_ch_T0000507;gene_name=TSPY10;ID=exon:HG00140_ch_T0000507:3;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6429605	6429716	.	-	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000507;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_T0000507;transcript_name=HG00140_ch_T0000507;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000507:3;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6429717	6429844	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000507;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_T0000507;transcript_name=HG00140_ch_T0000507;gene_name=TSPY10;ID=intron:HG00140_ch_T0000507:3;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6429845	6429922	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000507;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_T0000507;transcript_name=HG00140_ch_T0000507;gene_name=TSPY10;ID=exon:HG00140_ch_T0000507:4;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6429845	6429922	.	-	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000507;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_T0000507;transcript_name=HG00140_ch_T0000507;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000507:4;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6429923	6430529	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000507;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_T0000507;transcript_name=HG00140_ch_T0000507;gene_name=TSPY10;ID=intron:HG00140_ch_T0000507:4;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6430530	6431061	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000507;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_T0000507;transcript_name=HG00140_ch_T0000507;gene_name=TSPY10;ID=exon:HG00140_ch_T0000507:5;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6430530	6431015	.	-	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000507;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_T0000507;transcript_name=HG00140_ch_T0000507;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000507:5;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6431013	6431015	.	-	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000507;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_T0000507;transcript_name=HG00140_ch_T0000507;gene_name=TSPY10;ID=start_codon:HG00140_ch_T0000507;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6428266	6431015	100	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000508;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_G0000130;transcript_name=HG00140_ch_T0000508;gene_name=TSPY10;ID=HG00140_ch_T0000508;Name=TSPY10
HG00140_chrY	CAT	exon	6428266	6428475	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000508;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_T0000508;transcript_name=HG00140_ch_T0000508;gene_name=TSPY10;ID=exon:HG00140_ch_T0000508:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6428476	6429169	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000508;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_T0000508;transcript_name=HG00140_ch_T0000508;gene_name=TSPY10;ID=intron:HG00140_ch_T0000508:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6429170	6429262	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000508;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_T0000508;transcript_name=HG00140_ch_T0000508;gene_name=TSPY10;ID=exon:HG00140_ch_T0000508:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6429200	6429262	.	-	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000508;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_T0000508;transcript_name=HG00140_ch_T0000508;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000508:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6429200	6429202	.	-	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000508;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_T0000508;transcript_name=HG00140_ch_T0000508;gene_name=TSPY10;ID=stop_codon:HG00140_ch_T0000508;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6429263	6429357	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000508;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_T0000508;transcript_name=HG00140_ch_T0000508;gene_name=TSPY10;ID=intron:HG00140_ch_T0000508:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6429358	6429503	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000508;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_T0000508;transcript_name=HG00140_ch_T0000508;gene_name=TSPY10;ID=exon:HG00140_ch_T0000508:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6429358	6429503	.	-	2	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000508;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_T0000508;transcript_name=HG00140_ch_T0000508;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000508:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6429504	6429604	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000508;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_T0000508;transcript_name=HG00140_ch_T0000508;gene_name=TSPY10;ID=intron:HG00140_ch_T0000508:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6429605	6429716	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000508;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_T0000508;transcript_name=HG00140_ch_T0000508;gene_name=TSPY10;ID=exon:HG00140_ch_T0000508:3;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6429605	6429716	.	-	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000508;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_T0000508;transcript_name=HG00140_ch_T0000508;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000508:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6429717	6429844	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000508;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_T0000508;transcript_name=HG00140_ch_T0000508;gene_name=TSPY10;ID=intron:HG00140_ch_T0000508:3;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6429845	6429922	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000508;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_T0000508;transcript_name=HG00140_ch_T0000508;gene_name=TSPY10;ID=exon:HG00140_ch_T0000508:4;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6429845	6429922	.	-	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000508;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_T0000508;transcript_name=HG00140_ch_T0000508;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000508:3;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6429923	6430529	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000508;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_T0000508;transcript_name=HG00140_ch_T0000508;gene_name=TSPY10;ID=intron:HG00140_ch_T0000508:4;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6430530	6431015	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000508;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_T0000508;transcript_name=HG00140_ch_T0000508;gene_name=TSPY10;ID=exon:HG00140_ch_T0000508:5;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6430530	6431015	.	-	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000508;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_T0000508;transcript_name=HG00140_ch_T0000508;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000508:4;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6431013	6431015	.	-	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000508;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_T0000508;transcript_name=HG00140_ch_T0000508;gene_name=TSPY10;ID=start_codon:HG00140_ch_T0000508;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6428274	6429655	1000	-	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000509;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_G0000130;transcript_name=HG00140_ch_T0000509;gene_name=TSPY10;ID=HG00140_ch_T0000509;Name=TSPY10
HG00140_chrY	CAT	exon	6428274	6428475	.	-	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000509;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_T0000509;transcript_name=HG00140_ch_T0000509;gene_name=TSPY10;ID=exon:HG00140_ch_T0000509:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6428476	6429169	.	-	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000509;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_T0000509;transcript_name=HG00140_ch_T0000509;gene_name=TSPY10;ID=intron:HG00140_ch_T0000509:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6429170	6429251	.	-	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000509;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_T0000509;transcript_name=HG00140_ch_T0000509;gene_name=TSPY10;ID=exon:HG00140_ch_T0000509:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6429252	6429357	.	-	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000509;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_T0000509;transcript_name=HG00140_ch_T0000509;gene_name=TSPY10;ID=intron:HG00140_ch_T0000509:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6429358	6429655	.	-	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000509;gene_id=HG00140_ch_G0000130;Parent=HG00140_ch_T0000509;transcript_name=HG00140_ch_T0000509;gene_name=TSPY10;ID=exon:HG00140_ch_T0000509:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6432014	6434007	.	+	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000234830.9_3;gene_id=HG00140_ch_G0000131;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG00140_ch_G0000131;Name=FAM197Y9
HG00140_chrY	CAT	transcript	6432014	6434007	1000	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000510;gene_id=HG00140_ch_G0000131;Parent=HG00140_ch_G0000131;transcript_name=HG00140_ch_T0000510;gene_name=FAM197Y9;ID=HG00140_ch_T0000510;Name=FAM197Y9
HG00140_chrY	CAT	exon	6432014	6432323	.	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000510;gene_id=HG00140_ch_G0000131;Parent=HG00140_ch_T0000510;transcript_name=HG00140_ch_T0000510;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000510:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6432324	6433665	.	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000510;gene_id=HG00140_ch_G0000131;Parent=HG00140_ch_T0000510;transcript_name=HG00140_ch_T0000510;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000510:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6433666	6433749	.	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000510;gene_id=HG00140_ch_G0000131;Parent=HG00140_ch_T0000510;transcript_name=HG00140_ch_T0000510;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000510:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6433750	6433861	.	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000510;gene_id=HG00140_ch_G0000131;Parent=HG00140_ch_T0000510;transcript_name=HG00140_ch_T0000510;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000510:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6433862	6434007	.	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000510;gene_id=HG00140_ch_G0000131;Parent=HG00140_ch_T0000510;transcript_name=HG00140_ch_T0000510;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000510:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6433656	6441352	.	+	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000290448.1_6;gene_id=HG00140_ch_G0000132;gene_biotype=lncRNA;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG00140_ch_G0000132;Name=FAM197Y9
HG00140_chrY	CAT	transcript	6433656	6441352	1000	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000511;gene_id=HG00140_ch_G0000132;Parent=HG00140_ch_G0000132;transcript_name=HG00140_ch_T0000511;gene_name=FAM197Y9;ID=HG00140_ch_T0000511;Name=FAM197Y9
HG00140_chrY	CAT	exon	6433656	6433775	.	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000511;gene_id=HG00140_ch_G0000132;Parent=HG00140_ch_T0000511;transcript_name=HG00140_ch_T0000511;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000511:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6433776	6435588	.	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000511;gene_id=HG00140_ch_G0000132;Parent=HG00140_ch_T0000511;transcript_name=HG00140_ch_T0000511;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000511:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6435589	6435674	.	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000511;gene_id=HG00140_ch_G0000132;Parent=HG00140_ch_T0000511;transcript_name=HG00140_ch_T0000511;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000511:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6435675	6439224	.	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000511;gene_id=HG00140_ch_G0000132;Parent=HG00140_ch_T0000511;transcript_name=HG00140_ch_T0000511;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000511:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6439225	6441352	.	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000511;gene_id=HG00140_ch_G0000132;Parent=HG00140_ch_T0000511;transcript_name=HG00140_ch_T0000511;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000511:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6433674	6439284	1000	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000512;gene_id=HG00140_ch_G0000132;Parent=HG00140_ch_G0000132;transcript_name=HG00140_ch_T0000512;gene_name=FAM197Y9;ID=HG00140_ch_T0000512;Name=FAM197Y9
HG00140_chrY	CAT	exon	6433674	6433775	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000512;gene_id=HG00140_ch_G0000132;Parent=HG00140_ch_T0000512;transcript_name=HG00140_ch_T0000512;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000512:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6433776	6433861	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000512;gene_id=HG00140_ch_G0000132;Parent=HG00140_ch_T0000512;transcript_name=HG00140_ch_T0000512;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000512:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6433862	6434007	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000512;gene_id=HG00140_ch_G0000132;Parent=HG00140_ch_T0000512;transcript_name=HG00140_ch_T0000512;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000512:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6434008	6435515	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000512;gene_id=HG00140_ch_G0000132;Parent=HG00140_ch_T0000512;transcript_name=HG00140_ch_T0000512;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000512:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6435516	6435674	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000512;gene_id=HG00140_ch_G0000132;Parent=HG00140_ch_T0000512;transcript_name=HG00140_ch_T0000512;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000512:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6435675	6439224	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000512;gene_id=HG00140_ch_G0000132;Parent=HG00140_ch_T0000512;transcript_name=HG00140_ch_T0000512;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000512:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6439225	6439284	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000512;gene_id=HG00140_ch_G0000132;Parent=HG00140_ch_T0000512;transcript_name=HG00140_ch_T0000512;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000512:3;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6448551	6451353	.	-	.	source_gene_common_name=TSPY10;source_gene=ENSG00000236424.7;gene_id=HG00140_ch_G0000133;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG00140_ch_G0000133;Name=TSPY10
HG00140_chrY	CAT	transcript	6448551	6451307	1000	-	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000513;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_G0000133;transcript_name=HG00140_ch_T0000513;gene_name=TSPY10;ID=HG00140_ch_T0000513;Name=TSPY10
HG00140_chrY	CAT	exon	6448551	6449334	.	-	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000513;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_T0000513;transcript_name=HG00140_ch_T0000513;gene_name=TSPY10;ID=exon:HG00140_ch_T0000513:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6449335	6449461	.	-	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000513;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_T0000513;transcript_name=HG00140_ch_T0000513;gene_name=TSPY10;ID=intron:HG00140_ch_T0000513:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6449462	6450008	.	-	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000513;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_T0000513;transcript_name=HG00140_ch_T0000513;gene_name=TSPY10;ID=exon:HG00140_ch_T0000513:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6450009	6450136	.	-	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000513;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_T0000513;transcript_name=HG00140_ch_T0000513;gene_name=TSPY10;ID=intron:HG00140_ch_T0000513:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6450137	6450214	.	-	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000513;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_T0000513;transcript_name=HG00140_ch_T0000513;gene_name=TSPY10;ID=exon:HG00140_ch_T0000513:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6450215	6450821	.	-	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000513;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_T0000513;transcript_name=HG00140_ch_T0000513;gene_name=TSPY10;ID=intron:HG00140_ch_T0000513:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6450822	6451307	.	-	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000513;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_T0000513;transcript_name=HG00140_ch_T0000513;gene_name=TSPY10;ID=exon:HG00140_ch_T0000513:3;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6448557	6451353	100	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000514;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_G0000133;transcript_name=HG00140_ch_T0000514;gene_name=TSPY10;ID=HG00140_ch_T0000514;Name=TSPY10
HG00140_chrY	CAT	exon	6448557	6448767	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000514;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_T0000514;transcript_name=HG00140_ch_T0000514;gene_name=TSPY10;ID=exon:HG00140_ch_T0000514:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6448745	6448767	.	-	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000514;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_T0000514;transcript_name=HG00140_ch_T0000514;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000514:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6448745	6448747	.	-	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000514;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_T0000514;transcript_name=HG00140_ch_T0000514;gene_name=TSPY10;ID=stop_codon:HG00140_ch_T0000514;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6448768	6449461	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000514;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_T0000514;transcript_name=HG00140_ch_T0000514;gene_name=TSPY10;ID=intron:HG00140_ch_T0000514:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6449462	6449543	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000514;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_T0000514;transcript_name=HG00140_ch_T0000514;gene_name=TSPY10;ID=exon:HG00140_ch_T0000514:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6449462	6449543	.	-	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000514;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_T0000514;transcript_name=HG00140_ch_T0000514;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000514:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6449544	6449649	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000514;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_T0000514;transcript_name=HG00140_ch_T0000514;gene_name=TSPY10;ID=intron:HG00140_ch_T0000514:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6449650	6449795	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000514;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_T0000514;transcript_name=HG00140_ch_T0000514;gene_name=TSPY10;ID=exon:HG00140_ch_T0000514:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6449650	6449795	.	-	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000514;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_T0000514;transcript_name=HG00140_ch_T0000514;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000514:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6449796	6449896	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000514;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_T0000514;transcript_name=HG00140_ch_T0000514;gene_name=TSPY10;ID=intron:HG00140_ch_T0000514:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6449897	6450008	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000514;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_T0000514;transcript_name=HG00140_ch_T0000514;gene_name=TSPY10;ID=exon:HG00140_ch_T0000514:3;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6449897	6450008	.	-	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000514;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_T0000514;transcript_name=HG00140_ch_T0000514;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000514:3;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6450009	6450136	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000514;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_T0000514;transcript_name=HG00140_ch_T0000514;gene_name=TSPY10;ID=intron:HG00140_ch_T0000514:3;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6450137	6450214	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000514;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_T0000514;transcript_name=HG00140_ch_T0000514;gene_name=TSPY10;ID=exon:HG00140_ch_T0000514:4;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6450137	6450214	.	-	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000514;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_T0000514;transcript_name=HG00140_ch_T0000514;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000514:4;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6450215	6450821	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000514;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_T0000514;transcript_name=HG00140_ch_T0000514;gene_name=TSPY10;ID=intron:HG00140_ch_T0000514:4;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6450822	6451353	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000514;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_T0000514;transcript_name=HG00140_ch_T0000514;gene_name=TSPY10;ID=exon:HG00140_ch_T0000514:5;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6450822	6451307	.	-	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000514;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_T0000514;transcript_name=HG00140_ch_T0000514;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000514:5;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6451305	6451307	.	-	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000514;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_T0000514;transcript_name=HG00140_ch_T0000514;gene_name=TSPY10;ID=start_codon:HG00140_ch_T0000514;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6448558	6451307	100	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000515;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_G0000133;transcript_name=HG00140_ch_T0000515;gene_name=TSPY10;ID=HG00140_ch_T0000515;Name=TSPY10
HG00140_chrY	CAT	exon	6448558	6448767	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000515;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_T0000515;transcript_name=HG00140_ch_T0000515;gene_name=TSPY10;ID=exon:HG00140_ch_T0000515:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6448768	6449461	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000515;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_T0000515;transcript_name=HG00140_ch_T0000515;gene_name=TSPY10;ID=intron:HG00140_ch_T0000515:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6449462	6449554	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000515;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_T0000515;transcript_name=HG00140_ch_T0000515;gene_name=TSPY10;ID=exon:HG00140_ch_T0000515:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6449492	6449554	.	-	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000515;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_T0000515;transcript_name=HG00140_ch_T0000515;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000515:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6449492	6449494	.	-	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000515;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_T0000515;transcript_name=HG00140_ch_T0000515;gene_name=TSPY10;ID=stop_codon:HG00140_ch_T0000515;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6449555	6449649	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000515;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_T0000515;transcript_name=HG00140_ch_T0000515;gene_name=TSPY10;ID=intron:HG00140_ch_T0000515:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6449650	6449795	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000515;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_T0000515;transcript_name=HG00140_ch_T0000515;gene_name=TSPY10;ID=exon:HG00140_ch_T0000515:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6449650	6449795	.	-	2	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000515;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_T0000515;transcript_name=HG00140_ch_T0000515;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000515:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6449796	6449896	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000515;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_T0000515;transcript_name=HG00140_ch_T0000515;gene_name=TSPY10;ID=intron:HG00140_ch_T0000515:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6449897	6450008	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000515;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_T0000515;transcript_name=HG00140_ch_T0000515;gene_name=TSPY10;ID=exon:HG00140_ch_T0000515:3;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6449897	6450008	.	-	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000515;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_T0000515;transcript_name=HG00140_ch_T0000515;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000515:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6450009	6450136	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000515;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_T0000515;transcript_name=HG00140_ch_T0000515;gene_name=TSPY10;ID=intron:HG00140_ch_T0000515:3;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6450137	6450214	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000515;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_T0000515;transcript_name=HG00140_ch_T0000515;gene_name=TSPY10;ID=exon:HG00140_ch_T0000515:4;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6450137	6450214	.	-	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000515;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_T0000515;transcript_name=HG00140_ch_T0000515;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000515:3;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6450215	6450821	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000515;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_T0000515;transcript_name=HG00140_ch_T0000515;gene_name=TSPY10;ID=intron:HG00140_ch_T0000515:4;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6450822	6451307	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000515;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_T0000515;transcript_name=HG00140_ch_T0000515;gene_name=TSPY10;ID=exon:HG00140_ch_T0000515:5;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6450822	6451307	.	-	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000515;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_T0000515;transcript_name=HG00140_ch_T0000515;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000515:4;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6451305	6451307	.	-	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000515;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_T0000515;transcript_name=HG00140_ch_T0000515;gene_name=TSPY10;ID=start_codon:HG00140_ch_T0000515;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6448566	6449947	1000	-	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000516;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_G0000133;transcript_name=HG00140_ch_T0000516;gene_name=TSPY10;ID=HG00140_ch_T0000516;Name=TSPY10
HG00140_chrY	CAT	exon	6448566	6448767	.	-	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000516;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_T0000516;transcript_name=HG00140_ch_T0000516;gene_name=TSPY10;ID=exon:HG00140_ch_T0000516:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6448768	6449461	.	-	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000516;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_T0000516;transcript_name=HG00140_ch_T0000516;gene_name=TSPY10;ID=intron:HG00140_ch_T0000516:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6449462	6449543	.	-	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000516;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_T0000516;transcript_name=HG00140_ch_T0000516;gene_name=TSPY10;ID=exon:HG00140_ch_T0000516:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6449544	6449649	.	-	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000516;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_T0000516;transcript_name=HG00140_ch_T0000516;gene_name=TSPY10;ID=intron:HG00140_ch_T0000516:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6449650	6449947	.	-	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000516;gene_id=HG00140_ch_G0000133;Parent=HG00140_ch_T0000516;transcript_name=HG00140_ch_T0000516;gene_name=TSPY10;ID=exon:HG00140_ch_T0000516:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6452307	6454299	.	+	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_7;gene_id=HG00140_ch_G0000134;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG00140_ch_G0000134;Name=FAM197Y5
HG00140_chrY	CAT	transcript	6452307	6454299	1000	+	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000517;gene_id=HG00140_ch_G0000134;Parent=HG00140_ch_G0000134;transcript_name=HG00140_ch_T0000517;gene_name=FAM197Y5;ID=HG00140_ch_T0000517;Name=FAM197Y5
HG00140_chrY	CAT	exon	6452307	6452617	.	+	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000517;gene_id=HG00140_ch_G0000134;Parent=HG00140_ch_T0000517;transcript_name=HG00140_ch_T0000517;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000517:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6452618	6454153	.	+	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000517;gene_id=HG00140_ch_G0000134;Parent=HG00140_ch_T0000517;transcript_name=HG00140_ch_T0000517;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000517:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6454154	6454299	.	+	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000517;gene_id=HG00140_ch_G0000134;Parent=HG00140_ch_T0000517;transcript_name=HG00140_ch_T0000517;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000517:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6453954	6459693	.	+	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1_4;gene_id=HG00140_ch_G0000135;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG00140_ch_G0000135;Name=FAM197Y5
HG00140_chrY	CAT	transcript	6453954	6459693	1000	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000518;gene_id=HG00140_ch_G0000135;Parent=HG00140_ch_G0000135;transcript_name=HG00140_ch_T0000518;gene_name=FAM197Y5;ID=HG00140_ch_T0000518;Name=FAM197Y5
HG00140_chrY	CAT	exon	6453954	6454067	.	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000518;gene_id=HG00140_ch_G0000135;Parent=HG00140_ch_T0000518;transcript_name=HG00140_ch_T0000518;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000518:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6454068	6455868	.	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000518;gene_id=HG00140_ch_G0000135;Parent=HG00140_ch_T0000518;transcript_name=HG00140_ch_T0000518;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000518:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6455869	6455954	.	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000518;gene_id=HG00140_ch_G0000135;Parent=HG00140_ch_T0000518;transcript_name=HG00140_ch_T0000518;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000518:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6455955	6459503	.	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000518;gene_id=HG00140_ch_G0000135;Parent=HG00140_ch_T0000518;transcript_name=HG00140_ch_T0000518;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000518:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6459504	6459693	.	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000518;gene_id=HG00140_ch_G0000135;Parent=HG00140_ch_T0000518;transcript_name=HG00140_ch_T0000518;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000518:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6453966	6459563	1000	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000519;gene_id=HG00140_ch_G0000135;Parent=HG00140_ch_G0000135;transcript_name=HG00140_ch_T0000519;gene_name=FAM197Y5;ID=HG00140_ch_T0000519;Name=FAM197Y5
HG00140_chrY	CAT	exon	6453966	6454067	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000519;gene_id=HG00140_ch_G0000135;Parent=HG00140_ch_T0000519;transcript_name=HG00140_ch_T0000519;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000519:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6454068	6454153	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000519;gene_id=HG00140_ch_G0000135;Parent=HG00140_ch_T0000519;transcript_name=HG00140_ch_T0000519;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000519:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6454154	6454299	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000519;gene_id=HG00140_ch_G0000135;Parent=HG00140_ch_T0000519;transcript_name=HG00140_ch_T0000519;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000519:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6454300	6455795	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000519;gene_id=HG00140_ch_G0000135;Parent=HG00140_ch_T0000519;transcript_name=HG00140_ch_T0000519;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000519:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6455796	6455954	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000519;gene_id=HG00140_ch_G0000135;Parent=HG00140_ch_T0000519;transcript_name=HG00140_ch_T0000519;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000519:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6455955	6459503	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000519;gene_id=HG00140_ch_G0000135;Parent=HG00140_ch_T0000519;transcript_name=HG00140_ch_T0000519;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000519:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6459504	6459563	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000519;gene_id=HG00140_ch_G0000135;Parent=HG00140_ch_T0000519;transcript_name=HG00140_ch_T0000519;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000519:3;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6468842	6471647	.	-	.	source_gene_common_name=ENSG00000301844;source_gene=ENSG00000301844.1_1;gene_id=HG00140_ch_G0000136;gene_biotype=lncRNA;gene_name=ENSG00000301844;gene_sources=liftoff;ID=HG00140_ch_G0000136;Name=ENSG00000301844
HG00140_chrY	CAT	transcript	6468842	6471647	1000	-	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000520;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_G0000136;transcript_name=HG00140_ch_T0000520;gene_name=ENSG00000301844;ID=HG00140_ch_T0000520;Name=ENSG00000301844
HG00140_chrY	CAT	exon	6468842	6469064	.	-	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000520;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000520;transcript_name=HG00140_ch_T0000520;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000520:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6469065	6469758	.	-	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000520;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000520;transcript_name=HG00140_ch_T0000520;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000520:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6469759	6469840	.	-	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000520;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000520;transcript_name=HG00140_ch_T0000520;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000520:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6469841	6469946	.	-	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000520;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000520;transcript_name=HG00140_ch_T0000520;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000520:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6469947	6470092	.	-	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000520;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000520;transcript_name=HG00140_ch_T0000520;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000520:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6470093	6470193	.	-	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000520;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000520;transcript_name=HG00140_ch_T0000520;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000520:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6470194	6470305	.	-	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000520;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000520;transcript_name=HG00140_ch_T0000520;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000520:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6470306	6470433	.	-	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000520;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000520;transcript_name=HG00140_ch_T0000520;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000520:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6470434	6470511	.	-	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000520;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000520;transcript_name=HG00140_ch_T0000520;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000520:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6470512	6471118	.	-	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000520;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000520;transcript_name=HG00140_ch_T0000520;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000520:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6471119	6471647	.	-	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000520;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000520;transcript_name=HG00140_ch_T0000520;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000520:5;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6468847	6471638	1000	-	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000521;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_G0000136;transcript_name=HG00140_ch_T0000521;gene_name=ENSG00000301844;ID=HG00140_ch_T0000521;Name=ENSG00000301844
HG00140_chrY	CAT	exon	6468847	6469064	.	-	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000521;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000521;transcript_name=HG00140_ch_T0000521;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000521:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6469065	6469758	.	-	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000521;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000521;transcript_name=HG00140_ch_T0000521;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000521:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6469759	6469840	.	-	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000521;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000521;transcript_name=HG00140_ch_T0000521;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000521:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6469841	6469946	.	-	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000521;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000521;transcript_name=HG00140_ch_T0000521;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000521:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6469947	6470085	.	-	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000521;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000521;transcript_name=HG00140_ch_T0000521;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000521:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6470086	6470193	.	-	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000521;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000521;transcript_name=HG00140_ch_T0000521;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000521:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6470194	6470305	.	-	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000521;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000521;transcript_name=HG00140_ch_T0000521;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000521:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6470306	6470433	.	-	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000521;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000521;transcript_name=HG00140_ch_T0000521;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000521:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6470434	6470511	.	-	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000521;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000521;transcript_name=HG00140_ch_T0000521;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000521:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6470512	6471118	.	-	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000521;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000521;transcript_name=HG00140_ch_T0000521;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000521:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6471119	6471638	.	-	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000521;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000521;transcript_name=HG00140_ch_T0000521;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000521:5;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6468847	6471604	1000	-	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000522;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_G0000136;transcript_name=HG00140_ch_T0000522;gene_name=ENSG00000301844;ID=HG00140_ch_T0000522;Name=ENSG00000301844
HG00140_chrY	CAT	exon	6468847	6469064	.	-	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000522;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000522;transcript_name=HG00140_ch_T0000522;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000522:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6469065	6469758	.	-	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000522;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000522;transcript_name=HG00140_ch_T0000522;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000522:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6469759	6469851	.	-	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000522;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000522;transcript_name=HG00140_ch_T0000522;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000522:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6469852	6469946	.	-	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000522;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000522;transcript_name=HG00140_ch_T0000522;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000522:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6469947	6470092	.	-	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000522;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000522;transcript_name=HG00140_ch_T0000522;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000522:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6470093	6470193	.	-	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000522;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000522;transcript_name=HG00140_ch_T0000522;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000522:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6470194	6470305	.	-	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000522;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000522;transcript_name=HG00140_ch_T0000522;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000522:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6470306	6470433	.	-	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000522;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000522;transcript_name=HG00140_ch_T0000522;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000522:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6470434	6470511	.	-	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000522;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000522;transcript_name=HG00140_ch_T0000522;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000522:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6470512	6471118	.	-	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000522;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000522;transcript_name=HG00140_ch_T0000522;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000522:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6471119	6471604	.	-	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000522;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000522;transcript_name=HG00140_ch_T0000522;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000522:5;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6468847	6471606	1000	-	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000523;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_G0000136;transcript_name=HG00140_ch_T0000523;gene_name=ENSG00000301844;ID=HG00140_ch_T0000523;Name=ENSG00000301844
HG00140_chrY	CAT	exon	6468847	6469064	.	-	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000523;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000523;transcript_name=HG00140_ch_T0000523;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000523:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6469065	6469758	.	-	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000523;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000523;transcript_name=HG00140_ch_T0000523;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000523:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6469759	6469840	.	-	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000523;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000523;transcript_name=HG00140_ch_T0000523;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000523:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6469841	6469946	.	-	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000523;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000523;transcript_name=HG00140_ch_T0000523;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000523:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6469947	6470305	.	-	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000523;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000523;transcript_name=HG00140_ch_T0000523;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000523:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6470306	6470433	.	-	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000523;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000523;transcript_name=HG00140_ch_T0000523;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000523:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6470434	6470511	.	-	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000523;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000523;transcript_name=HG00140_ch_T0000523;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000523:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6470512	6471118	.	-	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000523;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000523;transcript_name=HG00140_ch_T0000523;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000523:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6471119	6471606	.	-	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000523;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000523;transcript_name=HG00140_ch_T0000523;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000523:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6468847	6471584	1000	-	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000524;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_G0000136;transcript_name=HG00140_ch_T0000524;gene_name=ENSG00000301844;ID=HG00140_ch_T0000524;Name=ENSG00000301844
HG00140_chrY	CAT	exon	6468847	6469064	.	-	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000524;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000524;transcript_name=HG00140_ch_T0000524;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000524:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6469065	6469758	.	-	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000524;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000524;transcript_name=HG00140_ch_T0000524;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000524:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6469759	6469851	.	-	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000524;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000524;transcript_name=HG00140_ch_T0000524;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000524:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6469852	6469946	.	-	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000524;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000524;transcript_name=HG00140_ch_T0000524;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000524:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6469947	6470305	.	-	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000524;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000524;transcript_name=HG00140_ch_T0000524;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000524:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6470306	6470433	.	-	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000524;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000524;transcript_name=HG00140_ch_T0000524;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000524:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6470434	6470511	.	-	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000524;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000524;transcript_name=HG00140_ch_T0000524;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000524:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6470512	6471118	.	-	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000524;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000524;transcript_name=HG00140_ch_T0000524;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000524:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6471119	6471584	.	-	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000524;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000524;transcript_name=HG00140_ch_T0000524;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000524:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6468852	6471616	1000	-	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000525;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_G0000136;transcript_name=HG00140_ch_T0000525;gene_name=ENSG00000301844;ID=HG00140_ch_T0000525;Name=ENSG00000301844
HG00140_chrY	CAT	exon	6468852	6469064	.	-	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000525;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000525;transcript_name=HG00140_ch_T0000525;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000525:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6469065	6469758	.	-	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000525;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000525;transcript_name=HG00140_ch_T0000525;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000525:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6469759	6470092	.	-	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000525;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000525;transcript_name=HG00140_ch_T0000525;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000525:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6470093	6470193	.	-	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000525;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000525;transcript_name=HG00140_ch_T0000525;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000525:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6470194	6470305	.	-	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000525;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000525;transcript_name=HG00140_ch_T0000525;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000525:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6470306	6470433	.	-	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000525;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000525;transcript_name=HG00140_ch_T0000525;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000525:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6470434	6470511	.	-	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000525;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000525;transcript_name=HG00140_ch_T0000525;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000525:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6470512	6471118	.	-	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000525;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000525;transcript_name=HG00140_ch_T0000525;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000525:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6471119	6471616	.	-	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000525;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000525;transcript_name=HG00140_ch_T0000525;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000525:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6468854	6471604	1000	-	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000526;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_G0000136;transcript_name=HG00140_ch_T0000526;gene_name=ENSG00000301844;ID=HG00140_ch_T0000526;Name=ENSG00000301844
HG00140_chrY	CAT	exon	6468854	6469064	.	-	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000526;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000526;transcript_name=HG00140_ch_T0000526;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000526:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6469065	6469758	.	-	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000526;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000526;transcript_name=HG00140_ch_T0000526;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000526:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6469759	6470305	.	-	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000526;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000526;transcript_name=HG00140_ch_T0000526;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000526:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6470306	6470433	.	-	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000526;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000526;transcript_name=HG00140_ch_T0000526;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000526:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6470434	6470511	.	-	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000526;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000526;transcript_name=HG00140_ch_T0000526;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000526:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6470512	6471118	.	-	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000526;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000526;transcript_name=HG00140_ch_T0000526;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000526:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6471119	6471604	.	-	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000526;gene_id=HG00140_ch_G0000136;Parent=HG00140_ch_T0000526;transcript_name=HG00140_ch_T0000526;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000526:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6468854	6471604	.	-	.	source_gene_common_name=TSPY7P;source_gene=ENSG00000188656.8_1;gene_id=HG00140_ch_G0000137;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY7P;gene_sources=liftoff;ID=HG00140_ch_G0000137;Name=TSPY7P
HG00140_chrY	CAT	transcript	6468854	6471604	1000	-	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00140_ch_T0000527;gene_id=HG00140_ch_G0000137;Parent=HG00140_ch_G0000137;transcript_name=HG00140_ch_T0000527;gene_name=TSPY7P;ID=HG00140_ch_T0000527;Name=TSPY7P
HG00140_chrY	CAT	exon	6468854	6469064	.	-	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00140_ch_T0000527;gene_id=HG00140_ch_G0000137;Parent=HG00140_ch_T0000527;transcript_name=HG00140_ch_T0000527;gene_name=TSPY7P;ID=exon:HG00140_ch_T0000527:0;Name=TSPY7P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6469065	6469758	.	-	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00140_ch_T0000527;gene_id=HG00140_ch_G0000137;Parent=HG00140_ch_T0000527;transcript_name=HG00140_ch_T0000527;gene_name=TSPY7P;ID=intron:HG00140_ch_T0000527:0;Name=TSPY7P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6469759	6469840	.	-	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00140_ch_T0000527;gene_id=HG00140_ch_G0000137;Parent=HG00140_ch_T0000527;transcript_name=HG00140_ch_T0000527;gene_name=TSPY7P;ID=exon:HG00140_ch_T0000527:1;Name=TSPY7P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6469841	6469946	.	-	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00140_ch_T0000527;gene_id=HG00140_ch_G0000137;Parent=HG00140_ch_T0000527;transcript_name=HG00140_ch_T0000527;gene_name=TSPY7P;ID=intron:HG00140_ch_T0000527:1;Name=TSPY7P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6469947	6470092	.	-	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00140_ch_T0000527;gene_id=HG00140_ch_G0000137;Parent=HG00140_ch_T0000527;transcript_name=HG00140_ch_T0000527;gene_name=TSPY7P;ID=exon:HG00140_ch_T0000527:2;Name=TSPY7P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6470093	6470193	.	-	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00140_ch_T0000527;gene_id=HG00140_ch_G0000137;Parent=HG00140_ch_T0000527;transcript_name=HG00140_ch_T0000527;gene_name=TSPY7P;ID=intron:HG00140_ch_T0000527:2;Name=TSPY7P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6470194	6470305	.	-	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00140_ch_T0000527;gene_id=HG00140_ch_G0000137;Parent=HG00140_ch_T0000527;transcript_name=HG00140_ch_T0000527;gene_name=TSPY7P;ID=exon:HG00140_ch_T0000527:3;Name=TSPY7P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6470306	6470433	.	-	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00140_ch_T0000527;gene_id=HG00140_ch_G0000137;Parent=HG00140_ch_T0000527;transcript_name=HG00140_ch_T0000527;gene_name=TSPY7P;ID=intron:HG00140_ch_T0000527:3;Name=TSPY7P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6470434	6470511	.	-	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00140_ch_T0000527;gene_id=HG00140_ch_G0000137;Parent=HG00140_ch_T0000527;transcript_name=HG00140_ch_T0000527;gene_name=TSPY7P;ID=exon:HG00140_ch_T0000527:4;Name=TSPY7P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6470512	6471118	.	-	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00140_ch_T0000527;gene_id=HG00140_ch_G0000137;Parent=HG00140_ch_T0000527;transcript_name=HG00140_ch_T0000527;gene_name=TSPY7P;ID=intron:HG00140_ch_T0000527:4;Name=TSPY7P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6471119	6471604	.	-	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00140_ch_T0000527;gene_id=HG00140_ch_G0000137;Parent=HG00140_ch_T0000527;transcript_name=HG00140_ch_T0000527;gene_name=TSPY7P;ID=exon:HG00140_ch_T0000527:5;Name=TSPY7P;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6472634	6474600	.	+	.	source_gene_common_name=FAM197Y8;source_gene=ENSG00000225560.7_1;gene_id=HG00140_ch_G0000138;gene_biotype=transcribed_processed_pseudogene;gene_name=FAM197Y8;gene_sources=liftoff;ID=HG00140_ch_G0000138;Name=FAM197Y8
HG00140_chrY	CAT	transcript	6472634	6474600	1000	+	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7_1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7_1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00140_ch_T0000528;gene_id=HG00140_ch_G0000138;Parent=HG00140_ch_G0000138;transcript_name=HG00140_ch_T0000528;gene_name=FAM197Y8;ID=HG00140_ch_T0000528;Name=FAM197Y8
HG00140_chrY	CAT	exon	6472634	6472934	.	+	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7_1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7_1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00140_ch_T0000528;gene_id=HG00140_ch_G0000138;Parent=HG00140_ch_T0000528;transcript_name=HG00140_ch_T0000528;gene_name=FAM197Y8;ID=exon:HG00140_ch_T0000528:0;Name=FAM197Y8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6472935	6474255	.	+	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7_1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7_1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00140_ch_T0000528;gene_id=HG00140_ch_G0000138;Parent=HG00140_ch_T0000528;transcript_name=HG00140_ch_T0000528;gene_name=FAM197Y8;ID=intron:HG00140_ch_T0000528:0;Name=FAM197Y8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6474256	6474365	.	+	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7_1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7_1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00140_ch_T0000528;gene_id=HG00140_ch_G0000138;Parent=HG00140_ch_T0000528;transcript_name=HG00140_ch_T0000528;gene_name=FAM197Y8;ID=exon:HG00140_ch_T0000528:1;Name=FAM197Y8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6474366	6474451	.	+	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7_1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7_1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00140_ch_T0000528;gene_id=HG00140_ch_G0000138;Parent=HG00140_ch_T0000528;transcript_name=HG00140_ch_T0000528;gene_name=FAM197Y8;ID=intron:HG00140_ch_T0000528:1;Name=FAM197Y8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6474452	6474600	.	+	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7_1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7_1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00140_ch_T0000528;gene_id=HG00140_ch_G0000138;Parent=HG00140_ch_T0000528;transcript_name=HG00140_ch_T0000528;gene_name=FAM197Y8;ID=exon:HG00140_ch_T0000528:2;Name=FAM197Y8;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6474045	6481924	.	+	.	source_gene_common_name=FAM197Y8;source_gene=ENSG00000293362.1;gene_id=HG00140_ch_G0000139;gene_biotype=lncRNA;gene_name=FAM197Y8;gene_sources=liftoff;ID=HG00140_ch_G0000139;Name=FAM197Y8
HG00140_chrY	CAT	transcript	6474045	6481924	1000	+	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00140_ch_T0000529;gene_id=HG00140_ch_G0000139;Parent=HG00140_ch_G0000139;transcript_name=HG00140_ch_T0000529;gene_name=FAM197Y8;ID=HG00140_ch_T0000529;Name=FAM197Y8
HG00140_chrY	CAT	exon	6474045	6474059	.	+	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00140_ch_T0000529;gene_id=HG00140_ch_G0000139;Parent=HG00140_ch_T0000529;transcript_name=HG00140_ch_T0000529;gene_name=FAM197Y8;ID=exon:HG00140_ch_T0000529:0;Name=FAM197Y8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6474060	6474255	.	+	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00140_ch_T0000529;gene_id=HG00140_ch_G0000139;Parent=HG00140_ch_T0000529;transcript_name=HG00140_ch_T0000529;gene_name=FAM197Y8;ID=intron:HG00140_ch_T0000529:0;Name=FAM197Y8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6474256	6474365	.	+	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00140_ch_T0000529;gene_id=HG00140_ch_G0000139;Parent=HG00140_ch_T0000529;transcript_name=HG00140_ch_T0000529;gene_name=FAM197Y8;ID=exon:HG00140_ch_T0000529:1;Name=FAM197Y8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6474366	6476162	.	+	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00140_ch_T0000529;gene_id=HG00140_ch_G0000139;Parent=HG00140_ch_T0000529;transcript_name=HG00140_ch_T0000529;gene_name=FAM197Y8;ID=intron:HG00140_ch_T0000529:1;Name=FAM197Y8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6476163	6476248	.	+	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00140_ch_T0000529;gene_id=HG00140_ch_G0000139;Parent=HG00140_ch_T0000529;transcript_name=HG00140_ch_T0000529;gene_name=FAM197Y8;ID=exon:HG00140_ch_T0000529:2;Name=FAM197Y8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6476249	6479795	.	+	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00140_ch_T0000529;gene_id=HG00140_ch_G0000139;Parent=HG00140_ch_T0000529;transcript_name=HG00140_ch_T0000529;gene_name=FAM197Y8;ID=intron:HG00140_ch_T0000529:2;Name=FAM197Y8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6479796	6481924	.	+	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00140_ch_T0000529;gene_id=HG00140_ch_G0000139;Parent=HG00140_ch_T0000529;transcript_name=HG00140_ch_T0000529;gene_name=FAM197Y8;ID=exon:HG00140_ch_T0000529:3;Name=FAM197Y8;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6474264	6479856	1000	+	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00140_ch_T0000530;gene_id=HG00140_ch_G0000139;Parent=HG00140_ch_G0000139;transcript_name=HG00140_ch_T0000530;gene_name=FAM197Y8;ID=HG00140_ch_T0000530;Name=FAM197Y8
HG00140_chrY	CAT	exon	6474264	6474365	.	+	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00140_ch_T0000530;gene_id=HG00140_ch_G0000139;Parent=HG00140_ch_T0000530;transcript_name=HG00140_ch_T0000530;gene_name=FAM197Y8;ID=exon:HG00140_ch_T0000530:0;Name=FAM197Y8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6474366	6474451	.	+	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00140_ch_T0000530;gene_id=HG00140_ch_G0000139;Parent=HG00140_ch_T0000530;transcript_name=HG00140_ch_T0000530;gene_name=FAM197Y8;ID=intron:HG00140_ch_T0000530:0;Name=FAM197Y8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6474452	6474597	.	+	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00140_ch_T0000530;gene_id=HG00140_ch_G0000139;Parent=HG00140_ch_T0000530;transcript_name=HG00140_ch_T0000530;gene_name=FAM197Y8;ID=exon:HG00140_ch_T0000530:1;Name=FAM197Y8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6474598	6476089	.	+	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00140_ch_T0000530;gene_id=HG00140_ch_G0000139;Parent=HG00140_ch_T0000530;transcript_name=HG00140_ch_T0000530;gene_name=FAM197Y8;ID=intron:HG00140_ch_T0000530:1;Name=FAM197Y8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6476090	6476248	.	+	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00140_ch_T0000530;gene_id=HG00140_ch_G0000139;Parent=HG00140_ch_T0000530;transcript_name=HG00140_ch_T0000530;gene_name=FAM197Y8;ID=exon:HG00140_ch_T0000530:2;Name=FAM197Y8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6476249	6479795	.	+	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00140_ch_T0000530;gene_id=HG00140_ch_G0000139;Parent=HG00140_ch_T0000530;transcript_name=HG00140_ch_T0000530;gene_name=FAM197Y8;ID=intron:HG00140_ch_T0000530:2;Name=FAM197Y8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6479796	6479856	.	+	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00140_ch_T0000530;gene_id=HG00140_ch_G0000139;Parent=HG00140_ch_T0000530;transcript_name=HG00140_ch_T0000530;gene_name=FAM197Y8;ID=exon:HG00140_ch_T0000530:3;Name=FAM197Y8;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6489155	6491912	.	-	.	source_gene_common_name=TSPY3;source_gene=ENSG00000228927.10;gene_id=HG00140_ch_G0000140;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff;ID=HG00140_ch_G0000140;Name=TSPY3
HG00140_chrY	CAT	transcript	6489155	6491912	1000	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000531;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_G0000140;transcript_name=HG00140_ch_T0000531;gene_name=TSPY3;ID=HG00140_ch_T0000531;Name=TSPY3
HG00140_chrY	CAT	exon	6489155	6489939	.	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000531;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000531;transcript_name=HG00140_ch_T0000531;gene_name=TSPY3;ID=exon:HG00140_ch_T0000531:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6489940	6490066	.	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000531;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000531;transcript_name=HG00140_ch_T0000531;gene_name=TSPY3;ID=intron:HG00140_ch_T0000531:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6490067	6490613	.	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000531;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000531;transcript_name=HG00140_ch_T0000531;gene_name=TSPY3;ID=exon:HG00140_ch_T0000531:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6490614	6490741	.	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000531;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000531;transcript_name=HG00140_ch_T0000531;gene_name=TSPY3;ID=intron:HG00140_ch_T0000531:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6490742	6490819	.	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000531;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000531;transcript_name=HG00140_ch_T0000531;gene_name=TSPY3;ID=exon:HG00140_ch_T0000531:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6490820	6491426	.	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000531;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000531;transcript_name=HG00140_ch_T0000531;gene_name=TSPY3;ID=intron:HG00140_ch_T0000531:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6491427	6491912	.	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000531;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000531;transcript_name=HG00140_ch_T0000531;gene_name=TSPY3;ID=exon:HG00140_ch_T0000531:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6489161	6491958	100	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000532;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_G0000140;transcript_name=HG00140_ch_T0000532;gene_name=TSPY3;ID=HG00140_ch_T0000532;Name=TSPY3
HG00140_chrY	CAT	exon	6489161	6489372	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000532;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000532;transcript_name=HG00140_ch_T0000532;gene_name=TSPY3;ID=exon:HG00140_ch_T0000532:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6489350	6489372	.	-	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000532;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000532;transcript_name=HG00140_ch_T0000532;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000532:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6489350	6489352	.	-	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000532;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000532;transcript_name=HG00140_ch_T0000532;gene_name=TSPY3;ID=stop_codon:HG00140_ch_T0000532;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6489373	6490066	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000532;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000532;transcript_name=HG00140_ch_T0000532;gene_name=TSPY3;ID=intron:HG00140_ch_T0000532:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6490067	6490148	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000532;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000532;transcript_name=HG00140_ch_T0000532;gene_name=TSPY3;ID=exon:HG00140_ch_T0000532:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6490067	6490148	.	-	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000532;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000532;transcript_name=HG00140_ch_T0000532;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000532:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6490149	6490254	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000532;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000532;transcript_name=HG00140_ch_T0000532;gene_name=TSPY3;ID=intron:HG00140_ch_T0000532:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6490255	6490400	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000532;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000532;transcript_name=HG00140_ch_T0000532;gene_name=TSPY3;ID=exon:HG00140_ch_T0000532:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6490255	6490400	.	-	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000532;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000532;transcript_name=HG00140_ch_T0000532;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000532:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6490401	6490501	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000532;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000532;transcript_name=HG00140_ch_T0000532;gene_name=TSPY3;ID=intron:HG00140_ch_T0000532:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6490502	6490613	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000532;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000532;transcript_name=HG00140_ch_T0000532;gene_name=TSPY3;ID=exon:HG00140_ch_T0000532:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6490502	6490613	.	-	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000532;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000532;transcript_name=HG00140_ch_T0000532;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000532:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6490614	6490741	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000532;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000532;transcript_name=HG00140_ch_T0000532;gene_name=TSPY3;ID=intron:HG00140_ch_T0000532:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6490742	6490819	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000532;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000532;transcript_name=HG00140_ch_T0000532;gene_name=TSPY3;ID=exon:HG00140_ch_T0000532:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6490742	6490819	.	-	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000532;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000532;transcript_name=HG00140_ch_T0000532;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000532:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6490820	6491426	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000532;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000532;transcript_name=HG00140_ch_T0000532;gene_name=TSPY3;ID=intron:HG00140_ch_T0000532:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6491427	6491958	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000532;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000532;transcript_name=HG00140_ch_T0000532;gene_name=TSPY3;ID=exon:HG00140_ch_T0000532:5;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6491427	6491912	.	-	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000532;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000532;transcript_name=HG00140_ch_T0000532;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000532:5;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6491910	6491912	.	-	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000532;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000532;transcript_name=HG00140_ch_T0000532;gene_name=TSPY3;ID=start_codon:HG00140_ch_T0000532;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6489162	6491912	100	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000533;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_G0000140;transcript_name=HG00140_ch_T0000533;gene_name=TSPY3;ID=HG00140_ch_T0000533;Name=TSPY3
HG00140_chrY	CAT	exon	6489162	6489372	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000533;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000533;transcript_name=HG00140_ch_T0000533;gene_name=TSPY3;ID=exon:HG00140_ch_T0000533:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6489373	6490066	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000533;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000533;transcript_name=HG00140_ch_T0000533;gene_name=TSPY3;ID=intron:HG00140_ch_T0000533:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6490067	6490159	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000533;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000533;transcript_name=HG00140_ch_T0000533;gene_name=TSPY3;ID=exon:HG00140_ch_T0000533:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6490097	6490159	.	-	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000533;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000533;transcript_name=HG00140_ch_T0000533;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000533:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6490097	6490099	.	-	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000533;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000533;transcript_name=HG00140_ch_T0000533;gene_name=TSPY3;ID=stop_codon:HG00140_ch_T0000533;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6490160	6490254	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000533;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000533;transcript_name=HG00140_ch_T0000533;gene_name=TSPY3;ID=intron:HG00140_ch_T0000533:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6490255	6490400	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000533;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000533;transcript_name=HG00140_ch_T0000533;gene_name=TSPY3;ID=exon:HG00140_ch_T0000533:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6490255	6490400	.	-	2	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000533;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000533;transcript_name=HG00140_ch_T0000533;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000533:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6490401	6490501	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000533;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000533;transcript_name=HG00140_ch_T0000533;gene_name=TSPY3;ID=intron:HG00140_ch_T0000533:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6490502	6490613	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000533;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000533;transcript_name=HG00140_ch_T0000533;gene_name=TSPY3;ID=exon:HG00140_ch_T0000533:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6490502	6490613	.	-	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000533;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000533;transcript_name=HG00140_ch_T0000533;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000533:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6490614	6490741	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000533;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000533;transcript_name=HG00140_ch_T0000533;gene_name=TSPY3;ID=intron:HG00140_ch_T0000533:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6490742	6490819	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000533;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000533;transcript_name=HG00140_ch_T0000533;gene_name=TSPY3;ID=exon:HG00140_ch_T0000533:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6490742	6490819	.	-	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000533;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000533;transcript_name=HG00140_ch_T0000533;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000533:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6490820	6491426	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000533;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000533;transcript_name=HG00140_ch_T0000533;gene_name=TSPY3;ID=intron:HG00140_ch_T0000533:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6491427	6491912	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000533;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000533;transcript_name=HG00140_ch_T0000533;gene_name=TSPY3;ID=exon:HG00140_ch_T0000533:5;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6491427	6491912	.	-	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000533;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000533;transcript_name=HG00140_ch_T0000533;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000533:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6491910	6491912	.	-	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000533;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000533;transcript_name=HG00140_ch_T0000533;gene_name=TSPY3;ID=start_codon:HG00140_ch_T0000533;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6489170	6490552	1000	-	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000534;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_G0000140;transcript_name=HG00140_ch_T0000534;gene_name=TSPY3;ID=HG00140_ch_T0000534;Name=TSPY3
HG00140_chrY	CAT	exon	6489170	6489372	.	-	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000534;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000534;transcript_name=HG00140_ch_T0000534;gene_name=TSPY3;ID=exon:HG00140_ch_T0000534:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6489373	6490066	.	-	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000534;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000534;transcript_name=HG00140_ch_T0000534;gene_name=TSPY3;ID=intron:HG00140_ch_T0000534:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6490067	6490159	.	-	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000534;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000534;transcript_name=HG00140_ch_T0000534;gene_name=TSPY3;ID=exon:HG00140_ch_T0000534:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6490160	6490254	.	-	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000534;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000534;transcript_name=HG00140_ch_T0000534;gene_name=TSPY3;ID=intron:HG00140_ch_T0000534:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6490255	6490552	.	-	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000534;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000534;transcript_name=HG00140_ch_T0000534;gene_name=TSPY3;ID=exon:HG00140_ch_T0000534:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6489350	6491912	100	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000535;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_G0000140;transcript_name=HG00140_ch_T0000535;gene_name=TSPY3;ID=HG00140_ch_T0000535;Name=TSPY3
HG00140_chrY	CAT	exon	6489350	6489372	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000535;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000535;transcript_name=HG00140_ch_T0000535;gene_name=TSPY3;ID=exon:HG00140_ch_T0000535:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6489350	6489372	.	-	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000535;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000535;transcript_name=HG00140_ch_T0000535;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000535:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6489350	6489352	.	-	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000535;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000535;transcript_name=HG00140_ch_T0000535;gene_name=TSPY3;ID=stop_codon:HG00140_ch_T0000535;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6489373	6490066	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000535;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000535;transcript_name=HG00140_ch_T0000535;gene_name=TSPY3;ID=intron:HG00140_ch_T0000535:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6490067	6490148	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000535;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000535;transcript_name=HG00140_ch_T0000535;gene_name=TSPY3;ID=exon:HG00140_ch_T0000535:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6490067	6490148	.	-	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000535;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000535;transcript_name=HG00140_ch_T0000535;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000535:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6490149	6490254	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000535;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000535;transcript_name=HG00140_ch_T0000535;gene_name=TSPY3;ID=intron:HG00140_ch_T0000535:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6490255	6490400	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000535;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000535;transcript_name=HG00140_ch_T0000535;gene_name=TSPY3;ID=exon:HG00140_ch_T0000535:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6490255	6490400	.	-	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000535;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000535;transcript_name=HG00140_ch_T0000535;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000535:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6490401	6490501	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000535;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000535;transcript_name=HG00140_ch_T0000535;gene_name=TSPY3;ID=intron:HG00140_ch_T0000535:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6490502	6490613	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000535;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000535;transcript_name=HG00140_ch_T0000535;gene_name=TSPY3;ID=exon:HG00140_ch_T0000535:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6490502	6490613	.	-	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000535;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000535;transcript_name=HG00140_ch_T0000535;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000535:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6490614	6490741	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000535;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000535;transcript_name=HG00140_ch_T0000535;gene_name=TSPY3;ID=intron:HG00140_ch_T0000535:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6490742	6490819	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000535;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000535;transcript_name=HG00140_ch_T0000535;gene_name=TSPY3;ID=exon:HG00140_ch_T0000535:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6490742	6490819	.	-	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000535;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000535;transcript_name=HG00140_ch_T0000535;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000535:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6490820	6491426	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000535;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000535;transcript_name=HG00140_ch_T0000535;gene_name=TSPY3;ID=intron:HG00140_ch_T0000535:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6491427	6491564	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000535;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000535;transcript_name=HG00140_ch_T0000535;gene_name=TSPY3;ID=exon:HG00140_ch_T0000535:5;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6491427	6491564	.	-	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000535;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000535;transcript_name=HG00140_ch_T0000535;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000535:5;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6491565	6491825	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000535;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000535;transcript_name=HG00140_ch_T0000535;gene_name=TSPY3;ID=intron:HG00140_ch_T0000535:5;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6491826	6491912	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000535;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000535;transcript_name=HG00140_ch_T0000535;gene_name=TSPY3;ID=exon:HG00140_ch_T0000535:6;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6491826	6491912	.	-	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000535;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000535;transcript_name=HG00140_ch_T0000535;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000535:6;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6491910	6491912	.	-	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000535;gene_id=HG00140_ch_G0000140;Parent=HG00140_ch_T0000535;transcript_name=HG00140_ch_T0000535;gene_name=TSPY3;ID=start_codon:HG00140_ch_T0000535;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6492912	6494904	.	+	.	source_gene_common_name=ENSG00000286173;source_gene=ENSG00000286173.1;gene_id=HG00140_ch_G0000141;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000286173;gene_sources=liftoff;ID=HG00140_ch_G0000141;Name=ENSG00000286173
HG00140_chrY	CAT	transcript	6492912	6494904	1000	+	.	source_transcript=ENST00000420524.4;source_transcript_name=ENST00000420524;source_gene=ENSG00000286173.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286173.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420524.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000420524.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286173;transcript_id=HG00140_ch_T0000536;gene_id=HG00140_ch_G0000141;Parent=HG00140_ch_G0000141;transcript_name=HG00140_ch_T0000536;gene_name=ENSG00000286173;ID=HG00140_ch_T0000536;Name=ENSG00000286173
HG00140_chrY	CAT	exon	6492912	6493222	.	+	.	source_transcript=ENST00000420524.4;source_transcript_name=ENST00000420524;source_gene=ENSG00000286173.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286173.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420524.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000420524.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286173;transcript_id=HG00140_ch_T0000536;gene_id=HG00140_ch_G0000141;Parent=HG00140_ch_T0000536;transcript_name=HG00140_ch_T0000536;gene_name=ENSG00000286173;ID=exon:HG00140_ch_T0000536:0;Name=ENSG00000286173;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6493223	6494758	.	+	.	source_transcript=ENST00000420524.4;source_transcript_name=ENST00000420524;source_gene=ENSG00000286173.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286173.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420524.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000420524.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286173;transcript_id=HG00140_ch_T0000536;gene_id=HG00140_ch_G0000141;Parent=HG00140_ch_T0000536;transcript_name=HG00140_ch_T0000536;gene_name=ENSG00000286173;ID=intron:HG00140_ch_T0000536:0;Name=ENSG00000286173;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6494759	6494904	.	+	.	source_transcript=ENST00000420524.4;source_transcript_name=ENST00000420524;source_gene=ENSG00000286173.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286173.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420524.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000420524.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286173;transcript_id=HG00140_ch_T0000536;gene_id=HG00140_ch_G0000141;Parent=HG00140_ch_T0000536;transcript_name=HG00140_ch_T0000536;gene_name=ENSG00000286173;ID=exon:HG00140_ch_T0000536:1;Name=ENSG00000286173;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6494352	6502243	.	+	.	source_gene_common_name=FAM197Y6;source_gene=ENSG00000237802.7;gene_id=HG00140_ch_G0000142;gene_biotype=lncRNA;gene_name=FAM197Y6;gene_sources=liftoff;ID=HG00140_ch_G0000142;Name=FAM197Y6
HG00140_chrY	CAT	transcript	6494352	6502243	1000	+	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG00140_ch_T0000537;gene_id=HG00140_ch_G0000142;Parent=HG00140_ch_G0000142;transcript_name=HG00140_ch_T0000537;gene_name=FAM197Y6;ID=HG00140_ch_T0000537;Name=FAM197Y6
HG00140_chrY	CAT	exon	6494352	6494366	.	+	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG00140_ch_T0000537;gene_id=HG00140_ch_G0000142;Parent=HG00140_ch_T0000537;transcript_name=HG00140_ch_T0000537;gene_name=FAM197Y6;ID=exon:HG00140_ch_T0000537:0;Name=FAM197Y6;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6494367	6494562	.	+	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG00140_ch_T0000537;gene_id=HG00140_ch_G0000142;Parent=HG00140_ch_T0000537;transcript_name=HG00140_ch_T0000537;gene_name=FAM197Y6;ID=intron:HG00140_ch_T0000537:0;Name=FAM197Y6;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6494563	6494672	.	+	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG00140_ch_T0000537;gene_id=HG00140_ch_G0000142;Parent=HG00140_ch_T0000537;transcript_name=HG00140_ch_T0000537;gene_name=FAM197Y6;ID=exon:HG00140_ch_T0000537:1;Name=FAM197Y6;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6494673	6496477	.	+	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG00140_ch_T0000537;gene_id=HG00140_ch_G0000142;Parent=HG00140_ch_T0000537;transcript_name=HG00140_ch_T0000537;gene_name=FAM197Y6;ID=intron:HG00140_ch_T0000537:1;Name=FAM197Y6;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6496478	6496563	.	+	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG00140_ch_T0000537;gene_id=HG00140_ch_G0000142;Parent=HG00140_ch_T0000537;transcript_name=HG00140_ch_T0000537;gene_name=FAM197Y6;ID=exon:HG00140_ch_T0000537:2;Name=FAM197Y6;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6496564	6500114	.	+	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG00140_ch_T0000537;gene_id=HG00140_ch_G0000142;Parent=HG00140_ch_T0000537;transcript_name=HG00140_ch_T0000537;gene_name=FAM197Y6;ID=intron:HG00140_ch_T0000537:2;Name=FAM197Y6;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6500115	6502243	.	+	.	source_transcript=ENST00000442145.5;source_transcript_name=FAM197Y6-201;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442145.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000442145.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG00140_ch_T0000537;gene_id=HG00140_ch_G0000142;Parent=HG00140_ch_T0000537;transcript_name=HG00140_ch_T0000537;gene_name=FAM197Y6;ID=exon:HG00140_ch_T0000537:3;Name=FAM197Y6;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6494571	6500174	1000	+	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG00140_ch_T0000538;gene_id=HG00140_ch_G0000142;Parent=HG00140_ch_G0000142;transcript_name=HG00140_ch_T0000538;gene_name=FAM197Y6;ID=HG00140_ch_T0000538;Name=FAM197Y6
HG00140_chrY	CAT	exon	6494571	6494672	.	+	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG00140_ch_T0000538;gene_id=HG00140_ch_G0000142;Parent=HG00140_ch_T0000538;transcript_name=HG00140_ch_T0000538;gene_name=FAM197Y6;ID=exon:HG00140_ch_T0000538:0;Name=FAM197Y6;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6494673	6494758	.	+	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG00140_ch_T0000538;gene_id=HG00140_ch_G0000142;Parent=HG00140_ch_T0000538;transcript_name=HG00140_ch_T0000538;gene_name=FAM197Y6;ID=intron:HG00140_ch_T0000538:0;Name=FAM197Y6;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6494759	6494904	.	+	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG00140_ch_T0000538;gene_id=HG00140_ch_G0000142;Parent=HG00140_ch_T0000538;transcript_name=HG00140_ch_T0000538;gene_name=FAM197Y6;ID=exon:HG00140_ch_T0000538:1;Name=FAM197Y6;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6494905	6496404	.	+	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG00140_ch_T0000538;gene_id=HG00140_ch_G0000142;Parent=HG00140_ch_T0000538;transcript_name=HG00140_ch_T0000538;gene_name=FAM197Y6;ID=intron:HG00140_ch_T0000538:1;Name=FAM197Y6;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6496405	6496563	.	+	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG00140_ch_T0000538;gene_id=HG00140_ch_G0000142;Parent=HG00140_ch_T0000538;transcript_name=HG00140_ch_T0000538;gene_name=FAM197Y6;ID=exon:HG00140_ch_T0000538:2;Name=FAM197Y6;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6496564	6500114	.	+	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG00140_ch_T0000538;gene_id=HG00140_ch_G0000142;Parent=HG00140_ch_T0000538;transcript_name=HG00140_ch_T0000538;gene_name=FAM197Y6;ID=intron:HG00140_ch_T0000538:2;Name=FAM197Y6;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6500115	6500174	.	+	.	source_transcript=ENST00000450658.5;source_transcript_name=FAM197Y6-202;source_gene=ENSG00000237802.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237802.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000450658.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG00140_ch_T0000538;gene_id=HG00140_ch_G0000142;Parent=HG00140_ch_T0000538;transcript_name=HG00140_ch_T0000538;gene_name=FAM197Y6;ID=exon:HG00140_ch_T0000538:3;Name=FAM197Y6;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6509437	6512239	.	-	.	source_gene_common_name=TSPY10;source_gene=ENSG00000236424.7;alternative_source_transcripts=ENST00000489397.1;gene_id=HG00140_ch_G0000143;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG00140_ch_G0000143;Name=TSPY10
HG00140_chrY	CAT	transcript	6509437	6512193	1000	-	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000489397.1;transcript_id=HG00140_ch_T0000539;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_G0000143;transcript_name=HG00140_ch_T0000539;gene_name=TSPY10;ID=HG00140_ch_T0000539;Name=TSPY10
HG00140_chrY	CAT	exon	6509437	6510220	.	-	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000489397.1;transcript_id=HG00140_ch_T0000539;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_T0000539;transcript_name=HG00140_ch_T0000539;gene_name=TSPY10;ID=exon:HG00140_ch_T0000539:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6510221	6510347	.	-	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000489397.1;transcript_id=HG00140_ch_T0000539;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_T0000539;transcript_name=HG00140_ch_T0000539;gene_name=TSPY10;ID=intron:HG00140_ch_T0000539:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6510348	6510894	.	-	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000489397.1;transcript_id=HG00140_ch_T0000539;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_T0000539;transcript_name=HG00140_ch_T0000539;gene_name=TSPY10;ID=exon:HG00140_ch_T0000539:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6510895	6511022	.	-	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000489397.1;transcript_id=HG00140_ch_T0000539;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_T0000539;transcript_name=HG00140_ch_T0000539;gene_name=TSPY10;ID=intron:HG00140_ch_T0000539:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6511023	6511100	.	-	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000489397.1;transcript_id=HG00140_ch_T0000539;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_T0000539;transcript_name=HG00140_ch_T0000539;gene_name=TSPY10;ID=exon:HG00140_ch_T0000539:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6511101	6511707	.	-	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000489397.1;transcript_id=HG00140_ch_T0000539;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_T0000539;transcript_name=HG00140_ch_T0000539;gene_name=TSPY10;ID=intron:HG00140_ch_T0000539:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6511708	6512193	.	-	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000489397.1;transcript_id=HG00140_ch_T0000539;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_T0000539;transcript_name=HG00140_ch_T0000539;gene_name=TSPY10;ID=exon:HG00140_ch_T0000539:3;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6509443	6512239	100	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000428845.6,ENST00000440215.5;transcript_id=HG00140_ch_T0000540;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_G0000143;transcript_name=HG00140_ch_T0000540;gene_name=TSPY10;ID=HG00140_ch_T0000540;Name=TSPY10
HG00140_chrY	CAT	exon	6509443	6509653	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000428845.6,ENST00000440215.5;transcript_id=HG00140_ch_T0000540;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_T0000540;transcript_name=HG00140_ch_T0000540;gene_name=TSPY10;ID=exon:HG00140_ch_T0000540:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6509631	6509653	.	-	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000428845.6,ENST00000440215.5;transcript_id=HG00140_ch_T0000540;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_T0000540;transcript_name=HG00140_ch_T0000540;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000540:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6509631	6509633	.	-	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000428845.6,ENST00000440215.5;transcript_id=HG00140_ch_T0000540;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_T0000540;transcript_name=HG00140_ch_T0000540;gene_name=TSPY10;ID=stop_codon:HG00140_ch_T0000540;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6509654	6510347	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000428845.6,ENST00000440215.5;transcript_id=HG00140_ch_T0000540;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_T0000540;transcript_name=HG00140_ch_T0000540;gene_name=TSPY10;ID=intron:HG00140_ch_T0000540:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6510348	6510429	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000428845.6,ENST00000440215.5;transcript_id=HG00140_ch_T0000540;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_T0000540;transcript_name=HG00140_ch_T0000540;gene_name=TSPY10;ID=exon:HG00140_ch_T0000540:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6510348	6510429	.	-	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000428845.6,ENST00000440215.5;transcript_id=HG00140_ch_T0000540;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_T0000540;transcript_name=HG00140_ch_T0000540;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000540:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6510430	6510535	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000428845.6,ENST00000440215.5;transcript_id=HG00140_ch_T0000540;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_T0000540;transcript_name=HG00140_ch_T0000540;gene_name=TSPY10;ID=intron:HG00140_ch_T0000540:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6510536	6510681	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000428845.6,ENST00000440215.5;transcript_id=HG00140_ch_T0000540;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_T0000540;transcript_name=HG00140_ch_T0000540;gene_name=TSPY10;ID=exon:HG00140_ch_T0000540:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6510536	6510681	.	-	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000428845.6,ENST00000440215.5;transcript_id=HG00140_ch_T0000540;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_T0000540;transcript_name=HG00140_ch_T0000540;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000540:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6510682	6510782	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000428845.6,ENST00000440215.5;transcript_id=HG00140_ch_T0000540;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_T0000540;transcript_name=HG00140_ch_T0000540;gene_name=TSPY10;ID=intron:HG00140_ch_T0000540:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6510783	6510894	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000428845.6,ENST00000440215.5;transcript_id=HG00140_ch_T0000540;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_T0000540;transcript_name=HG00140_ch_T0000540;gene_name=TSPY10;ID=exon:HG00140_ch_T0000540:3;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6510783	6510894	.	-	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000428845.6,ENST00000440215.5;transcript_id=HG00140_ch_T0000540;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_T0000540;transcript_name=HG00140_ch_T0000540;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000540:3;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6510895	6511022	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000428845.6,ENST00000440215.5;transcript_id=HG00140_ch_T0000540;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_T0000540;transcript_name=HG00140_ch_T0000540;gene_name=TSPY10;ID=intron:HG00140_ch_T0000540:3;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6511023	6511100	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000428845.6,ENST00000440215.5;transcript_id=HG00140_ch_T0000540;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_T0000540;transcript_name=HG00140_ch_T0000540;gene_name=TSPY10;ID=exon:HG00140_ch_T0000540:4;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6511023	6511100	.	-	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000428845.6,ENST00000440215.5;transcript_id=HG00140_ch_T0000540;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_T0000540;transcript_name=HG00140_ch_T0000540;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000540:4;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6511101	6511707	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000428845.6,ENST00000440215.5;transcript_id=HG00140_ch_T0000540;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_T0000540;transcript_name=HG00140_ch_T0000540;gene_name=TSPY10;ID=intron:HG00140_ch_T0000540:4;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6511708	6512239	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000428845.6,ENST00000440215.5;transcript_id=HG00140_ch_T0000540;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_T0000540;transcript_name=HG00140_ch_T0000540;gene_name=TSPY10;ID=exon:HG00140_ch_T0000540:5;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6511708	6512193	.	-	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000428845.6,ENST00000440215.5;transcript_id=HG00140_ch_T0000540;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_T0000540;transcript_name=HG00140_ch_T0000540;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000540:5;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6512191	6512193	.	-	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000428845.6,ENST00000440215.5;transcript_id=HG00140_ch_T0000540;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_T0000540;transcript_name=HG00140_ch_T0000540;gene_name=TSPY10;ID=start_codon:HG00140_ch_T0000540;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6509444	6512193	100	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00140_ch_T0000541;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_G0000143;transcript_name=HG00140_ch_T0000541;gene_name=TSPY10;ID=HG00140_ch_T0000541;Name=TSPY10
HG00140_chrY	CAT	exon	6509444	6509653	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00140_ch_T0000541;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_T0000541;transcript_name=HG00140_ch_T0000541;gene_name=TSPY10;ID=exon:HG00140_ch_T0000541:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6509654	6510347	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00140_ch_T0000541;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_T0000541;transcript_name=HG00140_ch_T0000541;gene_name=TSPY10;ID=intron:HG00140_ch_T0000541:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6510348	6510440	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00140_ch_T0000541;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_T0000541;transcript_name=HG00140_ch_T0000541;gene_name=TSPY10;ID=exon:HG00140_ch_T0000541:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6510378	6510440	.	-	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00140_ch_T0000541;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_T0000541;transcript_name=HG00140_ch_T0000541;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000541:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6510378	6510380	.	-	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00140_ch_T0000541;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_T0000541;transcript_name=HG00140_ch_T0000541;gene_name=TSPY10;ID=stop_codon:HG00140_ch_T0000541;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6510441	6510535	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00140_ch_T0000541;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_T0000541;transcript_name=HG00140_ch_T0000541;gene_name=TSPY10;ID=intron:HG00140_ch_T0000541:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6510536	6510681	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00140_ch_T0000541;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_T0000541;transcript_name=HG00140_ch_T0000541;gene_name=TSPY10;ID=exon:HG00140_ch_T0000541:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6510536	6510681	.	-	2	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00140_ch_T0000541;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_T0000541;transcript_name=HG00140_ch_T0000541;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000541:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6510682	6510782	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00140_ch_T0000541;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_T0000541;transcript_name=HG00140_ch_T0000541;gene_name=TSPY10;ID=intron:HG00140_ch_T0000541:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6510783	6510894	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00140_ch_T0000541;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_T0000541;transcript_name=HG00140_ch_T0000541;gene_name=TSPY10;ID=exon:HG00140_ch_T0000541:3;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6510783	6510894	.	-	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00140_ch_T0000541;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_T0000541;transcript_name=HG00140_ch_T0000541;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000541:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6510895	6511022	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00140_ch_T0000541;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_T0000541;transcript_name=HG00140_ch_T0000541;gene_name=TSPY10;ID=intron:HG00140_ch_T0000541:3;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6511023	6511100	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00140_ch_T0000541;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_T0000541;transcript_name=HG00140_ch_T0000541;gene_name=TSPY10;ID=exon:HG00140_ch_T0000541:4;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6511023	6511100	.	-	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00140_ch_T0000541;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_T0000541;transcript_name=HG00140_ch_T0000541;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000541:3;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6511101	6511707	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00140_ch_T0000541;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_T0000541;transcript_name=HG00140_ch_T0000541;gene_name=TSPY10;ID=intron:HG00140_ch_T0000541:4;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6511708	6512193	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00140_ch_T0000541;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_T0000541;transcript_name=HG00140_ch_T0000541;gene_name=TSPY10;ID=exon:HG00140_ch_T0000541:5;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6511708	6512193	.	-	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00140_ch_T0000541;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_T0000541;transcript_name=HG00140_ch_T0000541;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000541:4;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6512191	6512193	.	-	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000444056.1;transcript_id=HG00140_ch_T0000541;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_T0000541;transcript_name=HG00140_ch_T0000541;gene_name=TSPY10;ID=start_codon:HG00140_ch_T0000541;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6509452	6510833	1000	-	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000495839.1;transcript_id=HG00140_ch_T0000542;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_G0000143;transcript_name=HG00140_ch_T0000542;gene_name=TSPY10;ID=HG00140_ch_T0000542;Name=TSPY10
HG00140_chrY	CAT	exon	6509452	6509653	.	-	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000495839.1;transcript_id=HG00140_ch_T0000542;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_T0000542;transcript_name=HG00140_ch_T0000542;gene_name=TSPY10;ID=exon:HG00140_ch_T0000542:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6509654	6510347	.	-	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000495839.1;transcript_id=HG00140_ch_T0000542;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_T0000542;transcript_name=HG00140_ch_T0000542;gene_name=TSPY10;ID=intron:HG00140_ch_T0000542:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6510348	6510429	.	-	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000495839.1;transcript_id=HG00140_ch_T0000542;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_T0000542;transcript_name=HG00140_ch_T0000542;gene_name=TSPY10;ID=exon:HG00140_ch_T0000542:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6510430	6510535	.	-	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000495839.1;transcript_id=HG00140_ch_T0000542;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_T0000542;transcript_name=HG00140_ch_T0000542;gene_name=TSPY10;ID=intron:HG00140_ch_T0000542:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6510536	6510833	.	-	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=ENST00000495839.1;transcript_id=HG00140_ch_T0000542;gene_id=HG00140_ch_G0000143;Parent=HG00140_ch_T0000542;transcript_name=HG00140_ch_T0000542;gene_name=TSPY10;ID=exon:HG00140_ch_T0000542:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6513193	6515185	.	+	.	source_gene_common_name=FAM197Y2;source_gene=ENSG00000234803.9;gene_id=HG00140_ch_G0000144;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG00140_ch_G0000144;Name=FAM197Y2
HG00140_chrY	CAT	transcript	6513193	6515185	1000	+	.	source_transcript=ENST00000598351.3;source_transcript_name=FAM197Y2-201;source_gene=ENSG00000234803.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234803.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000598351.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000598351.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG00140_ch_T0000543;gene_id=HG00140_ch_G0000144;Parent=HG00140_ch_G0000144;transcript_name=HG00140_ch_T0000543;gene_name=FAM197Y2;ID=HG00140_ch_T0000543;Name=FAM197Y2
HG00140_chrY	CAT	exon	6513193	6513503	.	+	.	source_transcript=ENST00000598351.3;source_transcript_name=FAM197Y2-201;source_gene=ENSG00000234803.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234803.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000598351.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000598351.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG00140_ch_T0000543;gene_id=HG00140_ch_G0000144;Parent=HG00140_ch_T0000543;transcript_name=HG00140_ch_T0000543;gene_name=FAM197Y2;ID=exon:HG00140_ch_T0000543:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6513504	6515039	.	+	.	source_transcript=ENST00000598351.3;source_transcript_name=FAM197Y2-201;source_gene=ENSG00000234803.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234803.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000598351.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000598351.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG00140_ch_T0000543;gene_id=HG00140_ch_G0000144;Parent=HG00140_ch_T0000543;transcript_name=HG00140_ch_T0000543;gene_name=FAM197Y2;ID=intron:HG00140_ch_T0000543:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6515040	6515185	.	+	.	source_transcript=ENST00000598351.3;source_transcript_name=FAM197Y2-201;source_gene=ENSG00000234803.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234803.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000598351.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000598351.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;transcript_id=HG00140_ch_T0000543;gene_id=HG00140_ch_G0000144;Parent=HG00140_ch_T0000543;transcript_name=HG00140_ch_T0000543;gene_name=FAM197Y2;ID=exon:HG00140_ch_T0000543:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6514633	6522518	.	+	.	source_gene_common_name=ENSG00000290332;source_gene=ENSG00000290332.1;gene_id=HG00140_ch_G0000145;gene_biotype=lncRNA;gene_name=ENSG00000290332;gene_sources=liftoff;ID=HG00140_ch_G0000145;Name=ENSG00000290332
HG00140_chrY	CAT	transcript	6514633	6522518	1000	+	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG00140_ch_T0000544;gene_id=HG00140_ch_G0000145;Parent=HG00140_ch_G0000145;transcript_name=HG00140_ch_T0000544;gene_name=ENSG00000290332;ID=HG00140_ch_T0000544;Name=ENSG00000290332
HG00140_chrY	CAT	exon	6514633	6514647	.	+	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG00140_ch_T0000544;gene_id=HG00140_ch_G0000145;Parent=HG00140_ch_T0000544;transcript_name=HG00140_ch_T0000544;gene_name=ENSG00000290332;ID=exon:HG00140_ch_T0000544:0;Name=ENSG00000290332;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6514648	6514843	.	+	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG00140_ch_T0000544;gene_id=HG00140_ch_G0000145;Parent=HG00140_ch_T0000544;transcript_name=HG00140_ch_T0000544;gene_name=ENSG00000290332;ID=intron:HG00140_ch_T0000544:0;Name=ENSG00000290332;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6514844	6514953	.	+	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG00140_ch_T0000544;gene_id=HG00140_ch_G0000145;Parent=HG00140_ch_T0000544;transcript_name=HG00140_ch_T0000544;gene_name=ENSG00000290332;ID=exon:HG00140_ch_T0000544:1;Name=ENSG00000290332;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6514954	6516754	.	+	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG00140_ch_T0000544;gene_id=HG00140_ch_G0000145;Parent=HG00140_ch_T0000544;transcript_name=HG00140_ch_T0000544;gene_name=ENSG00000290332;ID=intron:HG00140_ch_T0000544:1;Name=ENSG00000290332;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6516755	6516840	.	+	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG00140_ch_T0000544;gene_id=HG00140_ch_G0000145;Parent=HG00140_ch_T0000544;transcript_name=HG00140_ch_T0000544;gene_name=ENSG00000290332;ID=exon:HG00140_ch_T0000544:2;Name=ENSG00000290332;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6516841	6520391	.	+	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG00140_ch_T0000544;gene_id=HG00140_ch_G0000145;Parent=HG00140_ch_T0000544;transcript_name=HG00140_ch_T0000544;gene_name=ENSG00000290332;ID=intron:HG00140_ch_T0000544:2;Name=ENSG00000290332;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6520392	6522518	.	+	.	source_transcript=ENST00000448006.5;source_transcript_name=ENST00000448006;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000448006.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448006.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG00140_ch_T0000544;gene_id=HG00140_ch_G0000145;Parent=HG00140_ch_T0000544;transcript_name=HG00140_ch_T0000544;gene_name=ENSG00000290332;ID=exon:HG00140_ch_T0000544:3;Name=ENSG00000290332;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6514852	6520451	1000	+	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG00140_ch_T0000545;gene_id=HG00140_ch_G0000145;Parent=HG00140_ch_G0000145;transcript_name=HG00140_ch_T0000545;gene_name=ENSG00000290332;ID=HG00140_ch_T0000545;Name=ENSG00000290332
HG00140_chrY	CAT	exon	6514852	6514953	.	+	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG00140_ch_T0000545;gene_id=HG00140_ch_G0000145;Parent=HG00140_ch_T0000545;transcript_name=HG00140_ch_T0000545;gene_name=ENSG00000290332;ID=exon:HG00140_ch_T0000545:0;Name=ENSG00000290332;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6514954	6515039	.	+	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG00140_ch_T0000545;gene_id=HG00140_ch_G0000145;Parent=HG00140_ch_T0000545;transcript_name=HG00140_ch_T0000545;gene_name=ENSG00000290332;ID=intron:HG00140_ch_T0000545:0;Name=ENSG00000290332;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6515040	6515185	.	+	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG00140_ch_T0000545;gene_id=HG00140_ch_G0000145;Parent=HG00140_ch_T0000545;transcript_name=HG00140_ch_T0000545;gene_name=ENSG00000290332;ID=exon:HG00140_ch_T0000545:1;Name=ENSG00000290332;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6515186	6516681	.	+	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG00140_ch_T0000545;gene_id=HG00140_ch_G0000145;Parent=HG00140_ch_T0000545;transcript_name=HG00140_ch_T0000545;gene_name=ENSG00000290332;ID=intron:HG00140_ch_T0000545:1;Name=ENSG00000290332;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6516682	6516840	.	+	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG00140_ch_T0000545;gene_id=HG00140_ch_G0000145;Parent=HG00140_ch_T0000545;transcript_name=HG00140_ch_T0000545;gene_name=ENSG00000290332;ID=exon:HG00140_ch_T0000545:2;Name=ENSG00000290332;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6516841	6520391	.	+	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG00140_ch_T0000545;gene_id=HG00140_ch_G0000145;Parent=HG00140_ch_T0000545;transcript_name=HG00140_ch_T0000545;gene_name=ENSG00000290332;ID=intron:HG00140_ch_T0000545:2;Name=ENSG00000290332;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6520392	6520451	.	+	.	source_transcript=ENST00000418016.5;source_transcript_name=ENST00000418016;source_gene=ENSG00000290332.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290332.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000418016.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000418016.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290332;transcript_id=HG00140_ch_T0000545;gene_id=HG00140_ch_G0000145;Parent=HG00140_ch_T0000545;transcript_name=HG00140_ch_T0000545;gene_name=ENSG00000290332;ID=exon:HG00140_ch_T0000545:3;Name=ENSG00000290332;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6529708	6532494	.	-	.	source_gene_common_name=ENSG00000293749;source_gene=ENSG00000293749.1;gene_id=HG00140_ch_G0000146;gene_biotype=lncRNA;gene_name=ENSG00000293749;gene_sources=liftoff;ID=HG00140_ch_G0000146;Name=ENSG00000293749
HG00140_chrY	CAT	transcript	6529708	6532494	1000	-	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000546;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_G0000146;transcript_name=HG00140_ch_T0000546;gene_name=ENSG00000293749;ID=HG00140_ch_T0000546;Name=ENSG00000293749
HG00140_chrY	CAT	exon	6529708	6529930	.	-	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000546;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000546;transcript_name=HG00140_ch_T0000546;gene_name=ENSG00000293749;ID=exon:HG00140_ch_T0000546:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6529931	6530624	.	-	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000546;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000546;transcript_name=HG00140_ch_T0000546;gene_name=ENSG00000293749;ID=intron:HG00140_ch_T0000546:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6530625	6530706	.	-	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000546;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000546;transcript_name=HG00140_ch_T0000546;gene_name=ENSG00000293749;ID=exon:HG00140_ch_T0000546:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6530707	6530812	.	-	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000546;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000546;transcript_name=HG00140_ch_T0000546;gene_name=ENSG00000293749;ID=intron:HG00140_ch_T0000546:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6530813	6530958	.	-	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000546;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000546;transcript_name=HG00140_ch_T0000546;gene_name=ENSG00000293749;ID=exon:HG00140_ch_T0000546:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6530959	6531059	.	-	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000546;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000546;transcript_name=HG00140_ch_T0000546;gene_name=ENSG00000293749;ID=intron:HG00140_ch_T0000546:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6531060	6531171	.	-	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000546;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000546;transcript_name=HG00140_ch_T0000546;gene_name=ENSG00000293749;ID=exon:HG00140_ch_T0000546:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6531172	6531299	.	-	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000546;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000546;transcript_name=HG00140_ch_T0000546;gene_name=ENSG00000293749;ID=intron:HG00140_ch_T0000546:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6531300	6531377	.	-	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000546;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000546;transcript_name=HG00140_ch_T0000546;gene_name=ENSG00000293749;ID=exon:HG00140_ch_T0000546:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6531378	6531984	.	-	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000546;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000546;transcript_name=HG00140_ch_T0000546;gene_name=ENSG00000293749;ID=intron:HG00140_ch_T0000546:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6531985	6532122	.	-	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000546;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000546;transcript_name=HG00140_ch_T0000546;gene_name=ENSG00000293749;ID=exon:HG00140_ch_T0000546:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6532123	6532401	.	-	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000546;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000546;transcript_name=HG00140_ch_T0000546;gene_name=ENSG00000293749;ID=intron:HG00140_ch_T0000546:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6532402	6532494	.	-	.	source_transcript=ENST00000718725.1;source_transcript_name=ENST00000718725;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000546;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000546;transcript_name=HG00140_ch_T0000546;gene_name=ENSG00000293749;ID=exon:HG00140_ch_T0000546:6;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6529709	6532031	1000	-	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000547;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_G0000146;transcript_name=HG00140_ch_T0000547;gene_name=ENSG00000293749;ID=HG00140_ch_T0000547;Name=ENSG00000293749
HG00140_chrY	CAT	exon	6529709	6529930	.	-	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000547;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000547;transcript_name=HG00140_ch_T0000547;gene_name=ENSG00000293749;ID=exon:HG00140_ch_T0000547:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6529931	6530624	.	-	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000547;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000547;transcript_name=HG00140_ch_T0000547;gene_name=ENSG00000293749;ID=intron:HG00140_ch_T0000547:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6530625	6530706	.	-	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000547;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000547;transcript_name=HG00140_ch_T0000547;gene_name=ENSG00000293749;ID=exon:HG00140_ch_T0000547:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6530707	6530812	.	-	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000547;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000547;transcript_name=HG00140_ch_T0000547;gene_name=ENSG00000293749;ID=intron:HG00140_ch_T0000547:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6530813	6530958	.	-	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000547;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000547;transcript_name=HG00140_ch_T0000547;gene_name=ENSG00000293749;ID=exon:HG00140_ch_T0000547:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6530959	6531059	.	-	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000547;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000547;transcript_name=HG00140_ch_T0000547;gene_name=ENSG00000293749;ID=intron:HG00140_ch_T0000547:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6531060	6531171	.	-	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000547;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000547;transcript_name=HG00140_ch_T0000547;gene_name=ENSG00000293749;ID=exon:HG00140_ch_T0000547:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6531172	6531299	.	-	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000547;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000547;transcript_name=HG00140_ch_T0000547;gene_name=ENSG00000293749;ID=intron:HG00140_ch_T0000547:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6531300	6531359	.	-	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000547;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000547;transcript_name=HG00140_ch_T0000547;gene_name=ENSG00000293749;ID=exon:HG00140_ch_T0000547:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6531360	6531928	.	-	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000547;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000547;transcript_name=HG00140_ch_T0000547;gene_name=ENSG00000293749;ID=intron:HG00140_ch_T0000547:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6531929	6532031	.	-	.	source_transcript=ENST00000718730.1;source_transcript_name=ENST00000718730;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000547;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000547;transcript_name=HG00140_ch_T0000547;gene_name=ENSG00000293749;ID=exon:HG00140_ch_T0000547:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6529713	6532473	1000	-	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000548;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_G0000146;transcript_name=HG00140_ch_T0000548;gene_name=ENSG00000293749;ID=HG00140_ch_T0000548;Name=ENSG00000293749
HG00140_chrY	CAT	exon	6529713	6529930	.	-	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000548;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000548;transcript_name=HG00140_ch_T0000548;gene_name=ENSG00000293749;ID=exon:HG00140_ch_T0000548:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6529931	6530624	.	-	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000548;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000548;transcript_name=HG00140_ch_T0000548;gene_name=ENSG00000293749;ID=intron:HG00140_ch_T0000548:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6530625	6530717	.	-	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000548;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000548;transcript_name=HG00140_ch_T0000548;gene_name=ENSG00000293749;ID=exon:HG00140_ch_T0000548:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6530718	6530812	.	-	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000548;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000548;transcript_name=HG00140_ch_T0000548;gene_name=ENSG00000293749;ID=intron:HG00140_ch_T0000548:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6530813	6530958	.	-	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000548;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000548;transcript_name=HG00140_ch_T0000548;gene_name=ENSG00000293749;ID=exon:HG00140_ch_T0000548:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6530959	6531059	.	-	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000548;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000548;transcript_name=HG00140_ch_T0000548;gene_name=ENSG00000293749;ID=intron:HG00140_ch_T0000548:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6531060	6531171	.	-	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000548;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000548;transcript_name=HG00140_ch_T0000548;gene_name=ENSG00000293749;ID=exon:HG00140_ch_T0000548:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6531172	6531299	.	-	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000548;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000548;transcript_name=HG00140_ch_T0000548;gene_name=ENSG00000293749;ID=intron:HG00140_ch_T0000548:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6531300	6531377	.	-	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000548;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000548;transcript_name=HG00140_ch_T0000548;gene_name=ENSG00000293749;ID=exon:HG00140_ch_T0000548:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6531378	6531984	.	-	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000548;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000548;transcript_name=HG00140_ch_T0000548;gene_name=ENSG00000293749;ID=intron:HG00140_ch_T0000548:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6531985	6532122	.	-	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000548;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000548;transcript_name=HG00140_ch_T0000548;gene_name=ENSG00000293749;ID=exon:HG00140_ch_T0000548:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6532123	6532401	.	-	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000548;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000548;transcript_name=HG00140_ch_T0000548;gene_name=ENSG00000293749;ID=intron:HG00140_ch_T0000548:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6532402	6532473	.	-	.	source_transcript=ENST00000718727.1;source_transcript_name=ENST00000718727;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000548;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000548;transcript_name=HG00140_ch_T0000548;gene_name=ENSG00000293749;ID=exon:HG00140_ch_T0000548:6;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6529713	6530785	1000	-	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000549;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_G0000146;transcript_name=HG00140_ch_T0000549;gene_name=ENSG00000293749;ID=HG00140_ch_T0000549;Name=ENSG00000293749
HG00140_chrY	CAT	exon	6529713	6529930	.	-	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000549;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000549;transcript_name=HG00140_ch_T0000549;gene_name=ENSG00000293749;ID=exon:HG00140_ch_T0000549:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6529931	6530624	.	-	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000549;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000549;transcript_name=HG00140_ch_T0000549;gene_name=ENSG00000293749;ID=intron:HG00140_ch_T0000549:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6530625	6530785	.	-	.	source_transcript=ENST00000718732.1;source_transcript_name=ENST00000718732;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000549;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000549;transcript_name=HG00140_ch_T0000549;gene_name=ENSG00000293749;ID=exon:HG00140_ch_T0000549:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6529715	6532253	1000	-	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000550;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_G0000146;transcript_name=HG00140_ch_T0000550;gene_name=ENSG00000293749;ID=HG00140_ch_T0000550;Name=ENSG00000293749
HG00140_chrY	CAT	exon	6529715	6529930	.	-	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000550;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000550;transcript_name=HG00140_ch_T0000550;gene_name=ENSG00000293749;ID=exon:HG00140_ch_T0000550:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6529931	6530624	.	-	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000550;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000550;transcript_name=HG00140_ch_T0000550;gene_name=ENSG00000293749;ID=intron:HG00140_ch_T0000550:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6530625	6530706	.	-	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000550;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000550;transcript_name=HG00140_ch_T0000550;gene_name=ENSG00000293749;ID=exon:HG00140_ch_T0000550:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6530707	6530812	.	-	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000550;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000550;transcript_name=HG00140_ch_T0000550;gene_name=ENSG00000293749;ID=intron:HG00140_ch_T0000550:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6530813	6530958	.	-	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000550;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000550;transcript_name=HG00140_ch_T0000550;gene_name=ENSG00000293749;ID=exon:HG00140_ch_T0000550:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6530959	6531059	.	-	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000550;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000550;transcript_name=HG00140_ch_T0000550;gene_name=ENSG00000293749;ID=intron:HG00140_ch_T0000550:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6531060	6531171	.	-	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000550;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000550;transcript_name=HG00140_ch_T0000550;gene_name=ENSG00000293749;ID=exon:HG00140_ch_T0000550:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6531172	6531299	.	-	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000550;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000550;transcript_name=HG00140_ch_T0000550;gene_name=ENSG00000293749;ID=intron:HG00140_ch_T0000550:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6531300	6531377	.	-	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000550;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000550;transcript_name=HG00140_ch_T0000550;gene_name=ENSG00000293749;ID=exon:HG00140_ch_T0000550:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6531378	6531984	.	-	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000550;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000550;transcript_name=HG00140_ch_T0000550;gene_name=ENSG00000293749;ID=intron:HG00140_ch_T0000550:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6531985	6532253	.	-	.	source_transcript=ENST00000718728.1;source_transcript_name=ENST00000718728;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000550;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000550;transcript_name=HG00140_ch_T0000550;gene_name=ENSG00000293749;ID=exon:HG00140_ch_T0000550:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6529720	6532482	1000	-	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000551;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_G0000146;transcript_name=HG00140_ch_T0000551;gene_name=ENSG00000293749;ID=HG00140_ch_T0000551;Name=ENSG00000293749
HG00140_chrY	CAT	exon	6529720	6529930	.	-	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000551;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000551;transcript_name=HG00140_ch_T0000551;gene_name=ENSG00000293749;ID=exon:HG00140_ch_T0000551:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6529931	6530624	.	-	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000551;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000551;transcript_name=HG00140_ch_T0000551;gene_name=ENSG00000293749;ID=intron:HG00140_ch_T0000551:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6530625	6530706	.	-	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000551;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000551;transcript_name=HG00140_ch_T0000551;gene_name=ENSG00000293749;ID=exon:HG00140_ch_T0000551:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6530707	6530812	.	-	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000551;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000551;transcript_name=HG00140_ch_T0000551;gene_name=ENSG00000293749;ID=intron:HG00140_ch_T0000551:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6530813	6530951	.	-	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000551;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000551;transcript_name=HG00140_ch_T0000551;gene_name=ENSG00000293749;ID=exon:HG00140_ch_T0000551:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6530952	6531059	.	-	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000551;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000551;transcript_name=HG00140_ch_T0000551;gene_name=ENSG00000293749;ID=intron:HG00140_ch_T0000551:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6531060	6531171	.	-	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000551;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000551;transcript_name=HG00140_ch_T0000551;gene_name=ENSG00000293749;ID=exon:HG00140_ch_T0000551:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6531172	6531299	.	-	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000551;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000551;transcript_name=HG00140_ch_T0000551;gene_name=ENSG00000293749;ID=intron:HG00140_ch_T0000551:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6531300	6531377	.	-	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000551;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000551;transcript_name=HG00140_ch_T0000551;gene_name=ENSG00000293749;ID=exon:HG00140_ch_T0000551:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6531378	6531984	.	-	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000551;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000551;transcript_name=HG00140_ch_T0000551;gene_name=ENSG00000293749;ID=intron:HG00140_ch_T0000551:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6531985	6532122	.	-	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000551;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000551;transcript_name=HG00140_ch_T0000551;gene_name=ENSG00000293749;ID=exon:HG00140_ch_T0000551:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6532123	6532401	.	-	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000551;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000551;transcript_name=HG00140_ch_T0000551;gene_name=ENSG00000293749;ID=intron:HG00140_ch_T0000551:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6532402	6532482	.	-	.	source_transcript=ENST00000718726.1;source_transcript_name=ENST00000718726;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000551;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000551;transcript_name=HG00140_ch_T0000551;gene_name=ENSG00000293749;ID=exon:HG00140_ch_T0000551:6;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6529720	6532157	1000	-	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000552;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_G0000146;transcript_name=HG00140_ch_T0000552;gene_name=ENSG00000293749;ID=HG00140_ch_T0000552;Name=ENSG00000293749
HG00140_chrY	CAT	exon	6529720	6529930	.	-	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000552;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000552;transcript_name=HG00140_ch_T0000552;gene_name=ENSG00000293749;ID=exon:HG00140_ch_T0000552:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6529931	6530624	.	-	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000552;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000552;transcript_name=HG00140_ch_T0000552;gene_name=ENSG00000293749;ID=intron:HG00140_ch_T0000552:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6530625	6530706	.	-	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000552;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000552;transcript_name=HG00140_ch_T0000552;gene_name=ENSG00000293749;ID=exon:HG00140_ch_T0000552:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6530707	6530812	.	-	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000552;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000552;transcript_name=HG00140_ch_T0000552;gene_name=ENSG00000293749;ID=intron:HG00140_ch_T0000552:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6530813	6530951	.	-	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000552;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000552;transcript_name=HG00140_ch_T0000552;gene_name=ENSG00000293749;ID=exon:HG00140_ch_T0000552:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6530952	6531059	.	-	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000552;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000552;transcript_name=HG00140_ch_T0000552;gene_name=ENSG00000293749;ID=intron:HG00140_ch_T0000552:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6531060	6531171	.	-	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000552;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000552;transcript_name=HG00140_ch_T0000552;gene_name=ENSG00000293749;ID=exon:HG00140_ch_T0000552:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6531172	6531299	.	-	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000552;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000552;transcript_name=HG00140_ch_T0000552;gene_name=ENSG00000293749;ID=intron:HG00140_ch_T0000552:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6531300	6531377	.	-	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000552;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000552;transcript_name=HG00140_ch_T0000552;gene_name=ENSG00000293749;ID=exon:HG00140_ch_T0000552:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6531378	6531984	.	-	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000552;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000552;transcript_name=HG00140_ch_T0000552;gene_name=ENSG00000293749;ID=intron:HG00140_ch_T0000552:4;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6531985	6532157	.	-	.	source_transcript=ENST00000718729.1;source_transcript_name=ENST00000718729;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000552;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000552;transcript_name=HG00140_ch_T0000552;gene_name=ENSG00000293749;ID=exon:HG00140_ch_T0000552:5;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6529722	6531330	1000	-	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000553;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_G0000146;transcript_name=HG00140_ch_T0000553;gene_name=ENSG00000293749;ID=HG00140_ch_T0000553;Name=ENSG00000293749
HG00140_chrY	CAT	exon	6529722	6529930	.	-	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000553;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000553;transcript_name=HG00140_ch_T0000553;gene_name=ENSG00000293749;ID=exon:HG00140_ch_T0000553:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6529931	6530624	.	-	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000553;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000553;transcript_name=HG00140_ch_T0000553;gene_name=ENSG00000293749;ID=intron:HG00140_ch_T0000553:0;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6530625	6530706	.	-	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000553;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000553;transcript_name=HG00140_ch_T0000553;gene_name=ENSG00000293749;ID=exon:HG00140_ch_T0000553:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6530707	6530812	.	-	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000553;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000553;transcript_name=HG00140_ch_T0000553;gene_name=ENSG00000293749;ID=intron:HG00140_ch_T0000553:1;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6530813	6531171	.	-	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000553;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000553;transcript_name=HG00140_ch_T0000553;gene_name=ENSG00000293749;ID=exon:HG00140_ch_T0000553:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6531172	6531299	.	-	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000553;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000553;transcript_name=HG00140_ch_T0000553;gene_name=ENSG00000293749;ID=intron:HG00140_ch_T0000553:2;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6531300	6531330	.	-	.	source_transcript=ENST00000718731.1;source_transcript_name=ENST00000718731;source_gene=ENSG00000293749.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293749.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000718731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000718731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293749;transcript_id=HG00140_ch_T0000553;gene_id=HG00140_ch_G0000146;Parent=HG00140_ch_T0000553;transcript_name=HG00140_ch_T0000553;gene_name=ENSG00000293749;ID=exon:HG00140_ch_T0000553:3;Name=ENSG00000293749;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6529908	6532488	.	-	.	source_gene_common_name=TSPY6P;source_gene=ENSG00000270073.1;gene_id=HG00140_ch_G0000147;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY6P;gene_sources=liftoff;ID=HG00140_ch_G0000147;Name=TSPY6P
HG00140_chrY	CAT	transcript	6529908	6532488	1000	-	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00140_ch_T0000554;gene_id=HG00140_ch_G0000147;Parent=HG00140_ch_G0000147;transcript_name=HG00140_ch_T0000554;gene_name=TSPY6P;ID=HG00140_ch_T0000554;Name=TSPY6P
HG00140_chrY	CAT	exon	6529908	6529930	.	-	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00140_ch_T0000554;gene_id=HG00140_ch_G0000147;Parent=HG00140_ch_T0000554;transcript_name=HG00140_ch_T0000554;gene_name=TSPY6P;ID=exon:HG00140_ch_T0000554:0;Name=TSPY6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6529931	6530624	.	-	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00140_ch_T0000554;gene_id=HG00140_ch_G0000147;Parent=HG00140_ch_T0000554;transcript_name=HG00140_ch_T0000554;gene_name=TSPY6P;ID=intron:HG00140_ch_T0000554:0;Name=TSPY6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6530625	6530706	.	-	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00140_ch_T0000554;gene_id=HG00140_ch_G0000147;Parent=HG00140_ch_T0000554;transcript_name=HG00140_ch_T0000554;gene_name=TSPY6P;ID=exon:HG00140_ch_T0000554:1;Name=TSPY6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6530707	6530812	.	-	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00140_ch_T0000554;gene_id=HG00140_ch_G0000147;Parent=HG00140_ch_T0000554;transcript_name=HG00140_ch_T0000554;gene_name=TSPY6P;ID=intron:HG00140_ch_T0000554:1;Name=TSPY6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6530813	6530958	.	-	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00140_ch_T0000554;gene_id=HG00140_ch_G0000147;Parent=HG00140_ch_T0000554;transcript_name=HG00140_ch_T0000554;gene_name=TSPY6P;ID=exon:HG00140_ch_T0000554:2;Name=TSPY6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6530959	6531059	.	-	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00140_ch_T0000554;gene_id=HG00140_ch_G0000147;Parent=HG00140_ch_T0000554;transcript_name=HG00140_ch_T0000554;gene_name=TSPY6P;ID=intron:HG00140_ch_T0000554:2;Name=TSPY6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6531060	6531171	.	-	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00140_ch_T0000554;gene_id=HG00140_ch_G0000147;Parent=HG00140_ch_T0000554;transcript_name=HG00140_ch_T0000554;gene_name=TSPY6P;ID=exon:HG00140_ch_T0000554:3;Name=TSPY6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6531172	6531299	.	-	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00140_ch_T0000554;gene_id=HG00140_ch_G0000147;Parent=HG00140_ch_T0000554;transcript_name=HG00140_ch_T0000554;gene_name=TSPY6P;ID=intron:HG00140_ch_T0000554:3;Name=TSPY6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6531300	6531377	.	-	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00140_ch_T0000554;gene_id=HG00140_ch_G0000147;Parent=HG00140_ch_T0000554;transcript_name=HG00140_ch_T0000554;gene_name=TSPY6P;ID=exon:HG00140_ch_T0000554:4;Name=TSPY6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6531378	6531984	.	-	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00140_ch_T0000554;gene_id=HG00140_ch_G0000147;Parent=HG00140_ch_T0000554;transcript_name=HG00140_ch_T0000554;gene_name=TSPY6P;ID=intron:HG00140_ch_T0000554:4;Name=TSPY6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6531985	6532251	.	-	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00140_ch_T0000554;gene_id=HG00140_ch_G0000147;Parent=HG00140_ch_T0000554;transcript_name=HG00140_ch_T0000554;gene_name=TSPY6P;ID=exon:HG00140_ch_T0000554:5;Name=TSPY6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6532252	6532269	.	-	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00140_ch_T0000554;gene_id=HG00140_ch_G0000147;Parent=HG00140_ch_T0000554;transcript_name=HG00140_ch_T0000554;gene_name=TSPY6P;ID=intron:HG00140_ch_T0000554:5;Name=TSPY6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6532270	6532488	.	-	.	source_transcript=ENST00000448518.1;source_transcript_name=TSPY6P-201;source_gene=ENSG00000270073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000270073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000448518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000448518.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY6P;transcript_id=HG00140_ch_T0000554;gene_id=HG00140_ch_G0000147;Parent=HG00140_ch_T0000554;transcript_name=HG00140_ch_T0000554;gene_name=TSPY6P;ID=exon:HG00140_ch_T0000554:6;Name=TSPY6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6533488	6535480	.	+	.	source_gene_common_name=ENSG00000286120;source_gene=ENSG00000286120.1_2;gene_id=HG00140_ch_G0000148;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000286120;gene_sources=liftoff;ID=HG00140_ch_G0000148;Name=ENSG00000286120
HG00140_chrY	CAT	transcript	6533488	6535480	1000	+	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=HG00140_ch_T0000555;gene_id=HG00140_ch_G0000148;Parent=HG00140_ch_G0000148;transcript_name=HG00140_ch_T0000555;gene_name=ENSG00000286120;ID=HG00140_ch_T0000555;Name=ENSG00000286120
HG00140_chrY	CAT	exon	6533488	6533798	.	+	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=HG00140_ch_T0000555;gene_id=HG00140_ch_G0000148;Parent=HG00140_ch_T0000555;transcript_name=HG00140_ch_T0000555;gene_name=ENSG00000286120;ID=exon:HG00140_ch_T0000555:0;Name=ENSG00000286120;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6533799	6535334	.	+	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=HG00140_ch_T0000555;gene_id=HG00140_ch_G0000148;Parent=HG00140_ch_T0000555;transcript_name=HG00140_ch_T0000555;gene_name=ENSG00000286120;ID=intron:HG00140_ch_T0000555:0;Name=ENSG00000286120;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6535335	6535480	.	+	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1_2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1_2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=HG00140_ch_T0000555;gene_id=HG00140_ch_G0000148;Parent=HG00140_ch_T0000555;transcript_name=HG00140_ch_T0000555;gene_name=ENSG00000286120;ID=exon:HG00140_ch_T0000555:1;Name=ENSG00000286120;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6534928	6542807	.	+	.	source_gene_common_name=FAM197Y7;source_gene=ENSG00000228383.7;gene_id=HG00140_ch_G0000149;gene_biotype=lncRNA;gene_name=FAM197Y7;gene_sources=liftoff;ID=HG00140_ch_G0000149;Name=FAM197Y7
HG00140_chrY	CAT	transcript	6534928	6542807	1000	+	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00140_ch_T0000556;gene_id=HG00140_ch_G0000149;Parent=HG00140_ch_G0000149;transcript_name=HG00140_ch_T0000556;gene_name=FAM197Y7;ID=HG00140_ch_T0000556;Name=FAM197Y7
HG00140_chrY	CAT	exon	6534928	6534942	.	+	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00140_ch_T0000556;gene_id=HG00140_ch_G0000149;Parent=HG00140_ch_T0000556;transcript_name=HG00140_ch_T0000556;gene_name=FAM197Y7;ID=exon:HG00140_ch_T0000556:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6534943	6535138	.	+	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00140_ch_T0000556;gene_id=HG00140_ch_G0000149;Parent=HG00140_ch_T0000556;transcript_name=HG00140_ch_T0000556;gene_name=FAM197Y7;ID=intron:HG00140_ch_T0000556:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6535139	6535248	.	+	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00140_ch_T0000556;gene_id=HG00140_ch_G0000149;Parent=HG00140_ch_T0000556;transcript_name=HG00140_ch_T0000556;gene_name=FAM197Y7;ID=exon:HG00140_ch_T0000556:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6535249	6537053	.	+	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00140_ch_T0000556;gene_id=HG00140_ch_G0000149;Parent=HG00140_ch_T0000556;transcript_name=HG00140_ch_T0000556;gene_name=FAM197Y7;ID=intron:HG00140_ch_T0000556:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6537054	6537139	.	+	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00140_ch_T0000556;gene_id=HG00140_ch_G0000149;Parent=HG00140_ch_T0000556;transcript_name=HG00140_ch_T0000556;gene_name=FAM197Y7;ID=exon:HG00140_ch_T0000556:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6537140	6540693	.	+	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00140_ch_T0000556;gene_id=HG00140_ch_G0000149;Parent=HG00140_ch_T0000556;transcript_name=HG00140_ch_T0000556;gene_name=FAM197Y7;ID=intron:HG00140_ch_T0000556:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6540694	6542807	.	+	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00140_ch_T0000556;gene_id=HG00140_ch_G0000149;Parent=HG00140_ch_T0000556;transcript_name=HG00140_ch_T0000556;gene_name=FAM197Y7;ID=exon:HG00140_ch_T0000556:3;Name=FAM197Y7;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6535147	6540753	1000	+	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00140_ch_T0000557;gene_id=HG00140_ch_G0000149;Parent=HG00140_ch_G0000149;transcript_name=HG00140_ch_T0000557;gene_name=FAM197Y7;ID=HG00140_ch_T0000557;Name=FAM197Y7
HG00140_chrY	CAT	exon	6535147	6535248	.	+	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00140_ch_T0000557;gene_id=HG00140_ch_G0000149;Parent=HG00140_ch_T0000557;transcript_name=HG00140_ch_T0000557;gene_name=FAM197Y7;ID=exon:HG00140_ch_T0000557:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6535249	6535334	.	+	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00140_ch_T0000557;gene_id=HG00140_ch_G0000149;Parent=HG00140_ch_T0000557;transcript_name=HG00140_ch_T0000557;gene_name=FAM197Y7;ID=intron:HG00140_ch_T0000557:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6535335	6535480	.	+	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00140_ch_T0000557;gene_id=HG00140_ch_G0000149;Parent=HG00140_ch_T0000557;transcript_name=HG00140_ch_T0000557;gene_name=FAM197Y7;ID=exon:HG00140_ch_T0000557:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6535481	6536980	.	+	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00140_ch_T0000557;gene_id=HG00140_ch_G0000149;Parent=HG00140_ch_T0000557;transcript_name=HG00140_ch_T0000557;gene_name=FAM197Y7;ID=intron:HG00140_ch_T0000557:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6536981	6537139	.	+	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00140_ch_T0000557;gene_id=HG00140_ch_G0000149;Parent=HG00140_ch_T0000557;transcript_name=HG00140_ch_T0000557;gene_name=FAM197Y7;ID=exon:HG00140_ch_T0000557:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6537140	6540693	.	+	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00140_ch_T0000557;gene_id=HG00140_ch_G0000149;Parent=HG00140_ch_T0000557;transcript_name=HG00140_ch_T0000557;gene_name=FAM197Y7;ID=intron:HG00140_ch_T0000557:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6540694	6540753	.	+	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00140_ch_T0000557;gene_id=HG00140_ch_G0000149;Parent=HG00140_ch_T0000557;transcript_name=HG00140_ch_T0000557;gene_name=FAM197Y7;ID=exon:HG00140_ch_T0000557:3;Name=FAM197Y7;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6550030	6552850	.	-	.	source_gene_common_name=TSPY4;source_gene=ENSG00000233803.9;gene_id=HG00140_ch_G0000150;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff;ID=HG00140_ch_G0000150;Name=TSPY4
HG00140_chrY	CAT	transcript	6550030	6552804	1000	-	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000558;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_G0000150;transcript_name=HG00140_ch_T0000558;gene_name=TSPY4;ID=HG00140_ch_T0000558;Name=TSPY4
HG00140_chrY	CAT	exon	6550030	6550813	.	-	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000558;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000558;transcript_name=HG00140_ch_T0000558;gene_name=TSPY4;ID=exon:HG00140_ch_T0000558:0;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6550814	6550940	.	-	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000558;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000558;transcript_name=HG00140_ch_T0000558;gene_name=TSPY4;ID=intron:HG00140_ch_T0000558:0;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6550941	6551487	.	-	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000558;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000558;transcript_name=HG00140_ch_T0000558;gene_name=TSPY4;ID=exon:HG00140_ch_T0000558:1;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6551488	6551615	.	-	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000558;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000558;transcript_name=HG00140_ch_T0000558;gene_name=TSPY4;ID=intron:HG00140_ch_T0000558:1;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6551616	6551693	.	-	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000558;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000558;transcript_name=HG00140_ch_T0000558;gene_name=TSPY4;ID=exon:HG00140_ch_T0000558:2;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6551694	6552300	.	-	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000558;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000558;transcript_name=HG00140_ch_T0000558;gene_name=TSPY4;ID=intron:HG00140_ch_T0000558:2;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6552301	6552804	.	-	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000558;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000558;transcript_name=HG00140_ch_T0000558;gene_name=TSPY4;ID=exon:HG00140_ch_T0000558:3;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6550036	6552850	100	-	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000440215.5;transcript_id=HG00140_ch_T0000559;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_G0000150;transcript_name=HG00140_ch_T0000559;gene_name=TSPY4;ID=HG00140_ch_T0000559;Name=TSPY4
HG00140_chrY	CAT	exon	6550036	6550246	.	-	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000440215.5;transcript_id=HG00140_ch_T0000559;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000559;transcript_name=HG00140_ch_T0000559;gene_name=TSPY4;ID=exon:HG00140_ch_T0000559:0;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6550224	6550246	.	-	2	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000440215.5;transcript_id=HG00140_ch_T0000559;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000559;transcript_name=HG00140_ch_T0000559;gene_name=TSPY4;ID=CDS:HG00140_ch_T0000559:0;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6550224	6550226	.	-	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000440215.5;transcript_id=HG00140_ch_T0000559;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000559;transcript_name=HG00140_ch_T0000559;gene_name=TSPY4;ID=stop_codon:HG00140_ch_T0000559;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6550247	6550940	.	-	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000440215.5;transcript_id=HG00140_ch_T0000559;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000559;transcript_name=HG00140_ch_T0000559;gene_name=TSPY4;ID=intron:HG00140_ch_T0000559:0;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6550941	6551022	.	-	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000440215.5;transcript_id=HG00140_ch_T0000559;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000559;transcript_name=HG00140_ch_T0000559;gene_name=TSPY4;ID=exon:HG00140_ch_T0000559:1;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6550941	6551022	.	-	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000440215.5;transcript_id=HG00140_ch_T0000559;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000559;transcript_name=HG00140_ch_T0000559;gene_name=TSPY4;ID=CDS:HG00140_ch_T0000559:1;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6551023	6551128	.	-	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000440215.5;transcript_id=HG00140_ch_T0000559;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000559;transcript_name=HG00140_ch_T0000559;gene_name=TSPY4;ID=intron:HG00140_ch_T0000559:1;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6551129	6551274	.	-	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000440215.5;transcript_id=HG00140_ch_T0000559;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000559;transcript_name=HG00140_ch_T0000559;gene_name=TSPY4;ID=exon:HG00140_ch_T0000559:2;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6551129	6551274	.	-	2	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000440215.5;transcript_id=HG00140_ch_T0000559;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000559;transcript_name=HG00140_ch_T0000559;gene_name=TSPY4;ID=CDS:HG00140_ch_T0000559:2;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6551275	6551375	.	-	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000440215.5;transcript_id=HG00140_ch_T0000559;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000559;transcript_name=HG00140_ch_T0000559;gene_name=TSPY4;ID=intron:HG00140_ch_T0000559:2;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6551376	6551487	.	-	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000440215.5;transcript_id=HG00140_ch_T0000559;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000559;transcript_name=HG00140_ch_T0000559;gene_name=TSPY4;ID=exon:HG00140_ch_T0000559:3;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6551376	6551487	.	-	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000440215.5;transcript_id=HG00140_ch_T0000559;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000559;transcript_name=HG00140_ch_T0000559;gene_name=TSPY4;ID=CDS:HG00140_ch_T0000559:3;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6551488	6551615	.	-	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000440215.5;transcript_id=HG00140_ch_T0000559;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000559;transcript_name=HG00140_ch_T0000559;gene_name=TSPY4;ID=intron:HG00140_ch_T0000559:3;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6551616	6551693	.	-	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000440215.5;transcript_id=HG00140_ch_T0000559;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000559;transcript_name=HG00140_ch_T0000559;gene_name=TSPY4;ID=exon:HG00140_ch_T0000559:4;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6551616	6551693	.	-	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000440215.5;transcript_id=HG00140_ch_T0000559;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000559;transcript_name=HG00140_ch_T0000559;gene_name=TSPY4;ID=CDS:HG00140_ch_T0000559:4;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6551694	6552300	.	-	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000440215.5;transcript_id=HG00140_ch_T0000559;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000559;transcript_name=HG00140_ch_T0000559;gene_name=TSPY4;ID=intron:HG00140_ch_T0000559:4;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6552301	6552850	.	-	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000440215.5;transcript_id=HG00140_ch_T0000559;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000559;transcript_name=HG00140_ch_T0000559;gene_name=TSPY4;ID=exon:HG00140_ch_T0000559:5;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6552301	6552804	.	-	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000440215.5;transcript_id=HG00140_ch_T0000559;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000559;transcript_name=HG00140_ch_T0000559;gene_name=TSPY4;ID=CDS:HG00140_ch_T0000559:5;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6552802	6552804	.	-	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000440215.5;transcript_id=HG00140_ch_T0000559;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000559;transcript_name=HG00140_ch_T0000559;gene_name=TSPY4;ID=start_codon:HG00140_ch_T0000559;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6550037	6552804	100	-	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000560;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_G0000150;transcript_name=HG00140_ch_T0000560;gene_name=TSPY4;ID=HG00140_ch_T0000560;Name=TSPY4
HG00140_chrY	CAT	exon	6550037	6550246	.	-	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000560;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000560;transcript_name=HG00140_ch_T0000560;gene_name=TSPY4;ID=exon:HG00140_ch_T0000560:0;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6550247	6550940	.	-	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000560;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000560;transcript_name=HG00140_ch_T0000560;gene_name=TSPY4;ID=intron:HG00140_ch_T0000560:0;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6550941	6551033	.	-	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000560;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000560;transcript_name=HG00140_ch_T0000560;gene_name=TSPY4;ID=exon:HG00140_ch_T0000560:1;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6550971	6551033	.	-	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000560;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000560;transcript_name=HG00140_ch_T0000560;gene_name=TSPY4;ID=CDS:HG00140_ch_T0000560:0;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6550971	6550973	.	-	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000560;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000560;transcript_name=HG00140_ch_T0000560;gene_name=TSPY4;ID=stop_codon:HG00140_ch_T0000560;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6551034	6551128	.	-	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000560;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000560;transcript_name=HG00140_ch_T0000560;gene_name=TSPY4;ID=intron:HG00140_ch_T0000560:1;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6551129	6551274	.	-	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000560;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000560;transcript_name=HG00140_ch_T0000560;gene_name=TSPY4;ID=exon:HG00140_ch_T0000560:2;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6551129	6551274	.	-	2	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000560;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000560;transcript_name=HG00140_ch_T0000560;gene_name=TSPY4;ID=CDS:HG00140_ch_T0000560:1;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6551275	6551375	.	-	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000560;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000560;transcript_name=HG00140_ch_T0000560;gene_name=TSPY4;ID=intron:HG00140_ch_T0000560:2;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6551376	6551487	.	-	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000560;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000560;transcript_name=HG00140_ch_T0000560;gene_name=TSPY4;ID=exon:HG00140_ch_T0000560:3;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6551376	6551487	.	-	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000560;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000560;transcript_name=HG00140_ch_T0000560;gene_name=TSPY4;ID=CDS:HG00140_ch_T0000560:2;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6551488	6551615	.	-	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000560;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000560;transcript_name=HG00140_ch_T0000560;gene_name=TSPY4;ID=intron:HG00140_ch_T0000560:3;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6551616	6551693	.	-	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000560;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000560;transcript_name=HG00140_ch_T0000560;gene_name=TSPY4;ID=exon:HG00140_ch_T0000560:4;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6551616	6551693	.	-	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000560;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000560;transcript_name=HG00140_ch_T0000560;gene_name=TSPY4;ID=CDS:HG00140_ch_T0000560:3;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6551694	6552300	.	-	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000560;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000560;transcript_name=HG00140_ch_T0000560;gene_name=TSPY4;ID=intron:HG00140_ch_T0000560:4;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6552301	6552804	.	-	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000560;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000560;transcript_name=HG00140_ch_T0000560;gene_name=TSPY4;ID=exon:HG00140_ch_T0000560:5;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6552301	6552804	.	-	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000560;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000560;transcript_name=HG00140_ch_T0000560;gene_name=TSPY4;ID=CDS:HG00140_ch_T0000560:4;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6552802	6552804	.	-	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000560;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000560;transcript_name=HG00140_ch_T0000560;gene_name=TSPY4;ID=start_codon:HG00140_ch_T0000560;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6550045	6551426	1000	-	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000561;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_G0000150;transcript_name=HG00140_ch_T0000561;gene_name=TSPY4;ID=HG00140_ch_T0000561;Name=TSPY4
HG00140_chrY	CAT	exon	6550045	6550246	.	-	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000561;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000561;transcript_name=HG00140_ch_T0000561;gene_name=TSPY4;ID=exon:HG00140_ch_T0000561:0;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6550247	6550940	.	-	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000561;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000561;transcript_name=HG00140_ch_T0000561;gene_name=TSPY4;ID=intron:HG00140_ch_T0000561:0;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6550941	6551033	.	-	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000561;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000561;transcript_name=HG00140_ch_T0000561;gene_name=TSPY4;ID=exon:HG00140_ch_T0000561:1;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6551034	6551128	.	-	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000561;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000561;transcript_name=HG00140_ch_T0000561;gene_name=TSPY4;ID=intron:HG00140_ch_T0000561:1;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6551129	6551426	.	-	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000561;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000561;transcript_name=HG00140_ch_T0000561;gene_name=TSPY4;ID=exon:HG00140_ch_T0000561:2;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6550157	6552850	100	-	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000562;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_G0000150;transcript_name=HG00140_ch_T0000562;gene_name=TSPY4;ID=HG00140_ch_T0000562;Name=TSPY4
HG00140_chrY	CAT	exon	6550157	6550246	.	-	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000562;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000562;transcript_name=HG00140_ch_T0000562;gene_name=TSPY4;ID=exon:HG00140_ch_T0000562:0;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6550224	6550246	.	-	2	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000562;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000562;transcript_name=HG00140_ch_T0000562;gene_name=TSPY4;ID=CDS:HG00140_ch_T0000562:0;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6550224	6550226	.	-	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000562;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000562;transcript_name=HG00140_ch_T0000562;gene_name=TSPY4;ID=stop_codon:HG00140_ch_T0000562;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6550247	6550940	.	-	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000562;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000562;transcript_name=HG00140_ch_T0000562;gene_name=TSPY4;ID=intron:HG00140_ch_T0000562:0;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6550941	6551022	.	-	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000562;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000562;transcript_name=HG00140_ch_T0000562;gene_name=TSPY4;ID=exon:HG00140_ch_T0000562:1;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6550941	6551022	.	-	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000562;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000562;transcript_name=HG00140_ch_T0000562;gene_name=TSPY4;ID=CDS:HG00140_ch_T0000562:1;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6551023	6551128	.	-	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000562;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000562;transcript_name=HG00140_ch_T0000562;gene_name=TSPY4;ID=intron:HG00140_ch_T0000562:1;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6551129	6551274	.	-	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000562;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000562;transcript_name=HG00140_ch_T0000562;gene_name=TSPY4;ID=exon:HG00140_ch_T0000562:2;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6551129	6551274	.	-	2	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000562;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000562;transcript_name=HG00140_ch_T0000562;gene_name=TSPY4;ID=CDS:HG00140_ch_T0000562:2;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6551275	6551375	.	-	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000562;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000562;transcript_name=HG00140_ch_T0000562;gene_name=TSPY4;ID=intron:HG00140_ch_T0000562:2;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6551376	6551487	.	-	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000562;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000562;transcript_name=HG00140_ch_T0000562;gene_name=TSPY4;ID=exon:HG00140_ch_T0000562:3;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6551376	6551487	.	-	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000562;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000562;transcript_name=HG00140_ch_T0000562;gene_name=TSPY4;ID=CDS:HG00140_ch_T0000562:3;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6551488	6551615	.	-	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000562;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000562;transcript_name=HG00140_ch_T0000562;gene_name=TSPY4;ID=intron:HG00140_ch_T0000562:3;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6551616	6551693	.	-	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000562;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000562;transcript_name=HG00140_ch_T0000562;gene_name=TSPY4;ID=exon:HG00140_ch_T0000562:4;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6551616	6551693	.	-	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000562;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000562;transcript_name=HG00140_ch_T0000562;gene_name=TSPY4;ID=CDS:HG00140_ch_T0000562:4;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6551694	6552300	.	-	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000562;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000562;transcript_name=HG00140_ch_T0000562;gene_name=TSPY4;ID=intron:HG00140_ch_T0000562:4;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6552301	6552438	.	-	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000562;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000562;transcript_name=HG00140_ch_T0000562;gene_name=TSPY4;ID=exon:HG00140_ch_T0000562:5;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6552301	6552438	.	-	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000562;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000562;transcript_name=HG00140_ch_T0000562;gene_name=TSPY4;ID=CDS:HG00140_ch_T0000562:5;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6552439	6552717	.	-	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000562;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000562;transcript_name=HG00140_ch_T0000562;gene_name=TSPY4;ID=intron:HG00140_ch_T0000562:5;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6552718	6552850	.	-	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000562;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000562;transcript_name=HG00140_ch_T0000562;gene_name=TSPY4;ID=exon:HG00140_ch_T0000562:6;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6552718	6552804	.	-	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000562;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000562;transcript_name=HG00140_ch_T0000562;gene_name=TSPY4;ID=CDS:HG00140_ch_T0000562:6;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6552802	6552804	.	-	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000562;gene_id=HG00140_ch_G0000150;Parent=HG00140_ch_T0000562;transcript_name=HG00140_ch_T0000562;gene_name=TSPY4;ID=start_codon:HG00140_ch_T0000562;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6553804	6555796	.	+	.	source_gene_common_name=FAM197Y3;source_gene=ENSG00000230066.7;gene_id=HG00140_ch_G0000151;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG00140_ch_G0000151;Name=FAM197Y3
HG00140_chrY	CAT	transcript	6553804	6555796	1000	+	.	source_transcript=ENST00000618346.2;source_transcript_name=FAM197Y3-201;source_gene=ENSG00000230066.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230066.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618346.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618346.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00140_ch_T0000563;gene_id=HG00140_ch_G0000151;Parent=HG00140_ch_G0000151;transcript_name=HG00140_ch_T0000563;gene_name=FAM197Y3;ID=HG00140_ch_T0000563;Name=FAM197Y3
HG00140_chrY	CAT	exon	6553804	6554114	.	+	.	source_transcript=ENST00000618346.2;source_transcript_name=FAM197Y3-201;source_gene=ENSG00000230066.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230066.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618346.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618346.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00140_ch_T0000563;gene_id=HG00140_ch_G0000151;Parent=HG00140_ch_T0000563;transcript_name=HG00140_ch_T0000563;gene_name=FAM197Y3;ID=exon:HG00140_ch_T0000563:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6554115	6555650	.	+	.	source_transcript=ENST00000618346.2;source_transcript_name=FAM197Y3-201;source_gene=ENSG00000230066.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230066.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618346.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618346.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00140_ch_T0000563;gene_id=HG00140_ch_G0000151;Parent=HG00140_ch_T0000563;transcript_name=HG00140_ch_T0000563;gene_name=FAM197Y3;ID=intron:HG00140_ch_T0000563:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6555651	6555796	.	+	.	source_transcript=ENST00000618346.2;source_transcript_name=FAM197Y3-201;source_gene=ENSG00000230066.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230066.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618346.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000618346.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00140_ch_T0000563;gene_id=HG00140_ch_G0000151;Parent=HG00140_ch_T0000563;transcript_name=HG00140_ch_T0000563;gene_name=FAM197Y3;ID=exon:HG00140_ch_T0000563:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6555244	6563116	.	+	.	source_gene_common_name=FAM197Y3;source_gene=ENSG00000290607.1;gene_id=HG00140_ch_G0000152;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG00140_ch_G0000152;Name=FAM197Y3
HG00140_chrY	CAT	transcript	6555244	6563116	1000	+	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00140_ch_T0000564;gene_id=HG00140_ch_G0000152;Parent=HG00140_ch_G0000152;transcript_name=HG00140_ch_T0000564;gene_name=FAM197Y3;ID=HG00140_ch_T0000564;Name=FAM197Y3
HG00140_chrY	CAT	exon	6555244	6555258	.	+	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00140_ch_T0000564;gene_id=HG00140_ch_G0000152;Parent=HG00140_ch_T0000564;transcript_name=HG00140_ch_T0000564;gene_name=FAM197Y3;ID=exon:HG00140_ch_T0000564:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6555259	6555454	.	+	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00140_ch_T0000564;gene_id=HG00140_ch_G0000152;Parent=HG00140_ch_T0000564;transcript_name=HG00140_ch_T0000564;gene_name=FAM197Y3;ID=intron:HG00140_ch_T0000564:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6555455	6555564	.	+	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00140_ch_T0000564;gene_id=HG00140_ch_G0000152;Parent=HG00140_ch_T0000564;transcript_name=HG00140_ch_T0000564;gene_name=FAM197Y3;ID=exon:HG00140_ch_T0000564:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6555565	6557367	.	+	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00140_ch_T0000564;gene_id=HG00140_ch_G0000152;Parent=HG00140_ch_T0000564;transcript_name=HG00140_ch_T0000564;gene_name=FAM197Y3;ID=intron:HG00140_ch_T0000564:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6557368	6557453	.	+	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00140_ch_T0000564;gene_id=HG00140_ch_G0000152;Parent=HG00140_ch_T0000564;transcript_name=HG00140_ch_T0000564;gene_name=FAM197Y3;ID=exon:HG00140_ch_T0000564:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6557454	6561002	.	+	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00140_ch_T0000564;gene_id=HG00140_ch_G0000152;Parent=HG00140_ch_T0000564;transcript_name=HG00140_ch_T0000564;gene_name=FAM197Y3;ID=intron:HG00140_ch_T0000564:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6561003	6563116	.	+	.	source_transcript=ENST00000427622.5;source_transcript_name=FAM197Y3-203;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427622.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000427622.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00140_ch_T0000564;gene_id=HG00140_ch_G0000152;Parent=HG00140_ch_T0000564;transcript_name=HG00140_ch_T0000564;gene_name=FAM197Y3;ID=exon:HG00140_ch_T0000564:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6555463	6561062	1000	+	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00140_ch_T0000565;gene_id=HG00140_ch_G0000152;Parent=HG00140_ch_G0000152;transcript_name=HG00140_ch_T0000565;gene_name=FAM197Y3;ID=HG00140_ch_T0000565;Name=FAM197Y3
HG00140_chrY	CAT	exon	6555463	6555564	.	+	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00140_ch_T0000565;gene_id=HG00140_ch_G0000152;Parent=HG00140_ch_T0000565;transcript_name=HG00140_ch_T0000565;gene_name=FAM197Y3;ID=exon:HG00140_ch_T0000565:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6555565	6555650	.	+	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00140_ch_T0000565;gene_id=HG00140_ch_G0000152;Parent=HG00140_ch_T0000565;transcript_name=HG00140_ch_T0000565;gene_name=FAM197Y3;ID=intron:HG00140_ch_T0000565:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6555651	6555796	.	+	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00140_ch_T0000565;gene_id=HG00140_ch_G0000152;Parent=HG00140_ch_T0000565;transcript_name=HG00140_ch_T0000565;gene_name=FAM197Y3;ID=exon:HG00140_ch_T0000565:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6555797	6557294	.	+	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00140_ch_T0000565;gene_id=HG00140_ch_G0000152;Parent=HG00140_ch_T0000565;transcript_name=HG00140_ch_T0000565;gene_name=FAM197Y3;ID=intron:HG00140_ch_T0000565:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6557295	6557453	.	+	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00140_ch_T0000565;gene_id=HG00140_ch_G0000152;Parent=HG00140_ch_T0000565;transcript_name=HG00140_ch_T0000565;gene_name=FAM197Y3;ID=exon:HG00140_ch_T0000565:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6557454	6561002	.	+	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00140_ch_T0000565;gene_id=HG00140_ch_G0000152;Parent=HG00140_ch_T0000565;transcript_name=HG00140_ch_T0000565;gene_name=FAM197Y3;ID=intron:HG00140_ch_T0000565:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6561003	6561062	.	+	.	source_transcript=ENST00000414596.5;source_transcript_name=FAM197Y3-202;source_gene=ENSG00000290607.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290607.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000414596.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000414596.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;transcript_id=HG00140_ch_T0000565;gene_id=HG00140_ch_G0000152;Parent=HG00140_ch_T0000565;transcript_name=HG00140_ch_T0000565;gene_name=FAM197Y3;ID=exon:HG00140_ch_T0000565:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6570336	6573093	.	-	.	source_gene_common_name=TSPY3;source_gene=ENSG00000228927.10;gene_id=HG00140_ch_G0000153;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff;ID=HG00140_ch_G0000153;Name=TSPY3
HG00140_chrY	CAT	transcript	6570336	6573093	1000	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000566;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_G0000153;transcript_name=HG00140_ch_T0000566;gene_name=TSPY3;ID=HG00140_ch_T0000566;Name=TSPY3
HG00140_chrY	CAT	exon	6570336	6571120	.	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000566;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000566;transcript_name=HG00140_ch_T0000566;gene_name=TSPY3;ID=exon:HG00140_ch_T0000566:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6571121	6571247	.	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000566;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000566;transcript_name=HG00140_ch_T0000566;gene_name=TSPY3;ID=intron:HG00140_ch_T0000566:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6571248	6571794	.	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000566;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000566;transcript_name=HG00140_ch_T0000566;gene_name=TSPY3;ID=exon:HG00140_ch_T0000566:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6571795	6571922	.	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000566;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000566;transcript_name=HG00140_ch_T0000566;gene_name=TSPY3;ID=intron:HG00140_ch_T0000566:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6571923	6572000	.	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000566;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000566;transcript_name=HG00140_ch_T0000566;gene_name=TSPY3;ID=exon:HG00140_ch_T0000566:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6572001	6572607	.	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000566;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000566;transcript_name=HG00140_ch_T0000566;gene_name=TSPY3;ID=intron:HG00140_ch_T0000566:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6572608	6573093	.	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000566;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000566;transcript_name=HG00140_ch_T0000566;gene_name=TSPY3;ID=exon:HG00140_ch_T0000566:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6570342	6573139	100	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000451548.6;transcript_id=HG00140_ch_T0000567;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_G0000153;transcript_name=HG00140_ch_T0000567;gene_name=TSPY3;ID=HG00140_ch_T0000567;Name=TSPY3
HG00140_chrY	CAT	exon	6570342	6570553	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000451548.6;transcript_id=HG00140_ch_T0000567;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000567;transcript_name=HG00140_ch_T0000567;gene_name=TSPY3;ID=exon:HG00140_ch_T0000567:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6570531	6570553	.	-	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000451548.6;transcript_id=HG00140_ch_T0000567;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000567;transcript_name=HG00140_ch_T0000567;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000567:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6570531	6570533	.	-	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000451548.6;transcript_id=HG00140_ch_T0000567;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000567;transcript_name=HG00140_ch_T0000567;gene_name=TSPY3;ID=stop_codon:HG00140_ch_T0000567;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6570554	6571247	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000451548.6;transcript_id=HG00140_ch_T0000567;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000567;transcript_name=HG00140_ch_T0000567;gene_name=TSPY3;ID=intron:HG00140_ch_T0000567:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6571248	6571329	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000451548.6;transcript_id=HG00140_ch_T0000567;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000567;transcript_name=HG00140_ch_T0000567;gene_name=TSPY3;ID=exon:HG00140_ch_T0000567:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6571248	6571329	.	-	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000451548.6;transcript_id=HG00140_ch_T0000567;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000567;transcript_name=HG00140_ch_T0000567;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000567:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6571330	6571435	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000451548.6;transcript_id=HG00140_ch_T0000567;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000567;transcript_name=HG00140_ch_T0000567;gene_name=TSPY3;ID=intron:HG00140_ch_T0000567:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6571436	6571581	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000451548.6;transcript_id=HG00140_ch_T0000567;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000567;transcript_name=HG00140_ch_T0000567;gene_name=TSPY3;ID=exon:HG00140_ch_T0000567:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6571436	6571581	.	-	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000451548.6;transcript_id=HG00140_ch_T0000567;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000567;transcript_name=HG00140_ch_T0000567;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000567:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6571582	6571682	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000451548.6;transcript_id=HG00140_ch_T0000567;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000567;transcript_name=HG00140_ch_T0000567;gene_name=TSPY3;ID=intron:HG00140_ch_T0000567:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6571683	6571794	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000451548.6;transcript_id=HG00140_ch_T0000567;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000567;transcript_name=HG00140_ch_T0000567;gene_name=TSPY3;ID=exon:HG00140_ch_T0000567:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6571683	6571794	.	-	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000451548.6;transcript_id=HG00140_ch_T0000567;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000567;transcript_name=HG00140_ch_T0000567;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000567:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6571795	6571922	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000451548.6;transcript_id=HG00140_ch_T0000567;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000567;transcript_name=HG00140_ch_T0000567;gene_name=TSPY3;ID=intron:HG00140_ch_T0000567:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6571923	6572000	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000451548.6;transcript_id=HG00140_ch_T0000567;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000567;transcript_name=HG00140_ch_T0000567;gene_name=TSPY3;ID=exon:HG00140_ch_T0000567:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6571923	6572000	.	-	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000451548.6;transcript_id=HG00140_ch_T0000567;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000567;transcript_name=HG00140_ch_T0000567;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000567:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6572001	6572607	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000451548.6;transcript_id=HG00140_ch_T0000567;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000567;transcript_name=HG00140_ch_T0000567;gene_name=TSPY3;ID=intron:HG00140_ch_T0000567:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6572608	6573139	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000451548.6;transcript_id=HG00140_ch_T0000567;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000567;transcript_name=HG00140_ch_T0000567;gene_name=TSPY3;ID=exon:HG00140_ch_T0000567:5;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6572608	6573093	.	-	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000451548.6;transcript_id=HG00140_ch_T0000567;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000567;transcript_name=HG00140_ch_T0000567;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000567:5;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6573091	6573093	.	-	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000451548.6;transcript_id=HG00140_ch_T0000567;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000567;transcript_name=HG00140_ch_T0000567;gene_name=TSPY3;ID=start_codon:HG00140_ch_T0000567;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6570343	6573093	100	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000568;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_G0000153;transcript_name=HG00140_ch_T0000568;gene_name=TSPY3;ID=HG00140_ch_T0000568;Name=TSPY3
HG00140_chrY	CAT	exon	6570343	6570553	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000568;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000568;transcript_name=HG00140_ch_T0000568;gene_name=TSPY3;ID=exon:HG00140_ch_T0000568:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6570554	6571247	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000568;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000568;transcript_name=HG00140_ch_T0000568;gene_name=TSPY3;ID=intron:HG00140_ch_T0000568:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6571248	6571340	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000568;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000568;transcript_name=HG00140_ch_T0000568;gene_name=TSPY3;ID=exon:HG00140_ch_T0000568:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6571278	6571340	.	-	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000568;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000568;transcript_name=HG00140_ch_T0000568;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000568:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6571278	6571280	.	-	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000568;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000568;transcript_name=HG00140_ch_T0000568;gene_name=TSPY3;ID=stop_codon:HG00140_ch_T0000568;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6571341	6571435	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000568;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000568;transcript_name=HG00140_ch_T0000568;gene_name=TSPY3;ID=intron:HG00140_ch_T0000568:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6571436	6571581	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000568;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000568;transcript_name=HG00140_ch_T0000568;gene_name=TSPY3;ID=exon:HG00140_ch_T0000568:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6571436	6571581	.	-	2	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000568;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000568;transcript_name=HG00140_ch_T0000568;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000568:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6571582	6571682	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000568;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000568;transcript_name=HG00140_ch_T0000568;gene_name=TSPY3;ID=intron:HG00140_ch_T0000568:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6571683	6571794	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000568;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000568;transcript_name=HG00140_ch_T0000568;gene_name=TSPY3;ID=exon:HG00140_ch_T0000568:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6571683	6571794	.	-	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000568;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000568;transcript_name=HG00140_ch_T0000568;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000568:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6571795	6571922	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000568;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000568;transcript_name=HG00140_ch_T0000568;gene_name=TSPY3;ID=intron:HG00140_ch_T0000568:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6571923	6572000	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000568;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000568;transcript_name=HG00140_ch_T0000568;gene_name=TSPY3;ID=exon:HG00140_ch_T0000568:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6571923	6572000	.	-	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000568;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000568;transcript_name=HG00140_ch_T0000568;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000568:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6572001	6572607	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000568;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000568;transcript_name=HG00140_ch_T0000568;gene_name=TSPY3;ID=intron:HG00140_ch_T0000568:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6572608	6573093	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000568;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000568;transcript_name=HG00140_ch_T0000568;gene_name=TSPY3;ID=exon:HG00140_ch_T0000568:5;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6572608	6573093	.	-	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000568;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000568;transcript_name=HG00140_ch_T0000568;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000568:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6573091	6573093	.	-	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000568;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000568;transcript_name=HG00140_ch_T0000568;gene_name=TSPY3;ID=start_codon:HG00140_ch_T0000568;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6570351	6571733	1000	-	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000569;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_G0000153;transcript_name=HG00140_ch_T0000569;gene_name=TSPY3;ID=HG00140_ch_T0000569;Name=TSPY3
HG00140_chrY	CAT	exon	6570351	6570553	.	-	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000569;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000569;transcript_name=HG00140_ch_T0000569;gene_name=TSPY3;ID=exon:HG00140_ch_T0000569:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6570554	6571247	.	-	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000569;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000569;transcript_name=HG00140_ch_T0000569;gene_name=TSPY3;ID=intron:HG00140_ch_T0000569:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6571248	6571340	.	-	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000569;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000569;transcript_name=HG00140_ch_T0000569;gene_name=TSPY3;ID=exon:HG00140_ch_T0000569:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6571341	6571435	.	-	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000569;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000569;transcript_name=HG00140_ch_T0000569;gene_name=TSPY3;ID=intron:HG00140_ch_T0000569:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6571436	6571733	.	-	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000569;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000569;transcript_name=HG00140_ch_T0000569;gene_name=TSPY3;ID=exon:HG00140_ch_T0000569:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6570531	6573093	100	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000570;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_G0000153;transcript_name=HG00140_ch_T0000570;gene_name=TSPY3;ID=HG00140_ch_T0000570;Name=TSPY3
HG00140_chrY	CAT	exon	6570531	6570553	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000570;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000570;transcript_name=HG00140_ch_T0000570;gene_name=TSPY3;ID=exon:HG00140_ch_T0000570:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6570531	6570553	.	-	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000570;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000570;transcript_name=HG00140_ch_T0000570;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000570:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6570531	6570533	.	-	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000570;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000570;transcript_name=HG00140_ch_T0000570;gene_name=TSPY3;ID=stop_codon:HG00140_ch_T0000570;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6570554	6571247	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000570;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000570;transcript_name=HG00140_ch_T0000570;gene_name=TSPY3;ID=intron:HG00140_ch_T0000570:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6571248	6571329	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000570;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000570;transcript_name=HG00140_ch_T0000570;gene_name=TSPY3;ID=exon:HG00140_ch_T0000570:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6571248	6571329	.	-	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000570;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000570;transcript_name=HG00140_ch_T0000570;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000570:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6571330	6571435	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000570;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000570;transcript_name=HG00140_ch_T0000570;gene_name=TSPY3;ID=intron:HG00140_ch_T0000570:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6571436	6571581	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000570;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000570;transcript_name=HG00140_ch_T0000570;gene_name=TSPY3;ID=exon:HG00140_ch_T0000570:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6571436	6571581	.	-	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000570;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000570;transcript_name=HG00140_ch_T0000570;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000570:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6571582	6571682	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000570;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000570;transcript_name=HG00140_ch_T0000570;gene_name=TSPY3;ID=intron:HG00140_ch_T0000570:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6571683	6571794	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000570;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000570;transcript_name=HG00140_ch_T0000570;gene_name=TSPY3;ID=exon:HG00140_ch_T0000570:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6571683	6571794	.	-	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000570;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000570;transcript_name=HG00140_ch_T0000570;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000570:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6571795	6571922	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000570;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000570;transcript_name=HG00140_ch_T0000570;gene_name=TSPY3;ID=intron:HG00140_ch_T0000570:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6571923	6572000	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000570;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000570;transcript_name=HG00140_ch_T0000570;gene_name=TSPY3;ID=exon:HG00140_ch_T0000570:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6571923	6572000	.	-	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000570;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000570;transcript_name=HG00140_ch_T0000570;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000570:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6572001	6572607	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000570;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000570;transcript_name=HG00140_ch_T0000570;gene_name=TSPY3;ID=intron:HG00140_ch_T0000570:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6572608	6572745	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000570;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000570;transcript_name=HG00140_ch_T0000570;gene_name=TSPY3;ID=exon:HG00140_ch_T0000570:5;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6572608	6572745	.	-	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000570;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000570;transcript_name=HG00140_ch_T0000570;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000570:5;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6572746	6573006	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000570;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000570;transcript_name=HG00140_ch_T0000570;gene_name=TSPY3;ID=intron:HG00140_ch_T0000570:5;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6573007	6573093	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000570;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000570;transcript_name=HG00140_ch_T0000570;gene_name=TSPY3;ID=exon:HG00140_ch_T0000570:6;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6573007	6573093	.	-	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000570;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000570;transcript_name=HG00140_ch_T0000570;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000570:6;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6573091	6573093	.	-	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000570;gene_id=HG00140_ch_G0000153;Parent=HG00140_ch_T0000570;transcript_name=HG00140_ch_T0000570;gene_name=TSPY3;ID=start_codon:HG00140_ch_T0000570;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6574093	6576085	.	+	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_8;gene_id=HG00140_ch_G0000154;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG00140_ch_G0000154;Name=FAM197Y5
HG00140_chrY	CAT	transcript	6574093	6576085	1000	+	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000571;gene_id=HG00140_ch_G0000154;Parent=HG00140_ch_G0000154;transcript_name=HG00140_ch_T0000571;gene_name=FAM197Y5;ID=HG00140_ch_T0000571;Name=FAM197Y5
HG00140_chrY	CAT	exon	6574093	6574403	.	+	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000571;gene_id=HG00140_ch_G0000154;Parent=HG00140_ch_T0000571;transcript_name=HG00140_ch_T0000571;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000571:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6574404	6575939	.	+	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000571;gene_id=HG00140_ch_G0000154;Parent=HG00140_ch_T0000571;transcript_name=HG00140_ch_T0000571;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000571:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6575940	6576085	.	+	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000571;gene_id=HG00140_ch_G0000154;Parent=HG00140_ch_T0000571;transcript_name=HG00140_ch_T0000571;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000571:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6575740	6581489	.	+	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1_1;gene_id=HG00140_ch_G0000155;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG00140_ch_G0000155;Name=FAM197Y5
HG00140_chrY	CAT	transcript	6575740	6581489	1000	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000572;gene_id=HG00140_ch_G0000155;Parent=HG00140_ch_G0000155;transcript_name=HG00140_ch_T0000572;gene_name=FAM197Y5;ID=HG00140_ch_T0000572;Name=FAM197Y5
HG00140_chrY	CAT	exon	6575740	6575853	.	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000572;gene_id=HG00140_ch_G0000155;Parent=HG00140_ch_T0000572;transcript_name=HG00140_ch_T0000572;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000572:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6575854	6577658	.	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000572;gene_id=HG00140_ch_G0000155;Parent=HG00140_ch_T0000572;transcript_name=HG00140_ch_T0000572;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000572:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6577659	6577744	.	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000572;gene_id=HG00140_ch_G0000155;Parent=HG00140_ch_T0000572;transcript_name=HG00140_ch_T0000572;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000572:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6577745	6581299	.	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000572;gene_id=HG00140_ch_G0000155;Parent=HG00140_ch_T0000572;transcript_name=HG00140_ch_T0000572;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000572:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6581300	6581489	.	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000572;gene_id=HG00140_ch_G0000155;Parent=HG00140_ch_T0000572;transcript_name=HG00140_ch_T0000572;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000572:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6575752	6581359	1000	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000573;gene_id=HG00140_ch_G0000155;Parent=HG00140_ch_G0000155;transcript_name=HG00140_ch_T0000573;gene_name=FAM197Y5;ID=HG00140_ch_T0000573;Name=FAM197Y5
HG00140_chrY	CAT	exon	6575752	6575853	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000573;gene_id=HG00140_ch_G0000155;Parent=HG00140_ch_T0000573;transcript_name=HG00140_ch_T0000573;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000573:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6575854	6575939	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000573;gene_id=HG00140_ch_G0000155;Parent=HG00140_ch_T0000573;transcript_name=HG00140_ch_T0000573;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000573:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6575940	6576085	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000573;gene_id=HG00140_ch_G0000155;Parent=HG00140_ch_T0000573;transcript_name=HG00140_ch_T0000573;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000573:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6576086	6577585	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000573;gene_id=HG00140_ch_G0000155;Parent=HG00140_ch_T0000573;transcript_name=HG00140_ch_T0000573;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000573:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6577586	6577744	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000573;gene_id=HG00140_ch_G0000155;Parent=HG00140_ch_T0000573;transcript_name=HG00140_ch_T0000573;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000573:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6577745	6581299	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000573;gene_id=HG00140_ch_G0000155;Parent=HG00140_ch_T0000573;transcript_name=HG00140_ch_T0000573;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000573:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6581300	6581359	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000573;gene_id=HG00140_ch_G0000155;Parent=HG00140_ch_T0000573;transcript_name=HG00140_ch_T0000573;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000573:3;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6590618	6593423	.	-	.	source_gene_common_name=ENSG00000301844;source_gene=ENSG00000301844.1;gene_id=HG00140_ch_G0000156;gene_biotype=lncRNA;gene_name=ENSG00000301844;gene_sources=liftoff;ID=HG00140_ch_G0000156;Name=ENSG00000301844
HG00140_chrY	CAT	transcript	6590618	6593423	1000	-	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000574;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_G0000156;transcript_name=HG00140_ch_T0000574;gene_name=ENSG00000301844;ID=HG00140_ch_T0000574;Name=ENSG00000301844
HG00140_chrY	CAT	exon	6590618	6590840	.	-	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000574;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000574;transcript_name=HG00140_ch_T0000574;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000574:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6590841	6591534	.	-	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000574;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000574;transcript_name=HG00140_ch_T0000574;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000574:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6591535	6591616	.	-	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000574;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000574;transcript_name=HG00140_ch_T0000574;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000574:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6591617	6591722	.	-	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000574;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000574;transcript_name=HG00140_ch_T0000574;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000574:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6591723	6591868	.	-	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000574;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000574;transcript_name=HG00140_ch_T0000574;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000574:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6591869	6591969	.	-	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000574;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000574;transcript_name=HG00140_ch_T0000574;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000574:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6591970	6592081	.	-	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000574;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000574;transcript_name=HG00140_ch_T0000574;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000574:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6592082	6592209	.	-	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000574;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000574;transcript_name=HG00140_ch_T0000574;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000574:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6592210	6592287	.	-	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000574;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000574;transcript_name=HG00140_ch_T0000574;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000574:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6592288	6592894	.	-	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000574;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000574;transcript_name=HG00140_ch_T0000574;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000574:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6592895	6593423	.	-	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000574;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000574;transcript_name=HG00140_ch_T0000574;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000574:5;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6590623	6593360	1000	-	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000575;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_G0000156;transcript_name=HG00140_ch_T0000575;gene_name=ENSG00000301844;ID=HG00140_ch_T0000575;Name=ENSG00000301844
HG00140_chrY	CAT	exon	6590623	6590840	.	-	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000575;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000575;transcript_name=HG00140_ch_T0000575;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000575:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6590841	6591534	.	-	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000575;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000575;transcript_name=HG00140_ch_T0000575;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000575:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6591535	6591627	.	-	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000575;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000575;transcript_name=HG00140_ch_T0000575;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000575:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6591628	6591722	.	-	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000575;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000575;transcript_name=HG00140_ch_T0000575;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000575:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6591723	6592081	.	-	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000575;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000575;transcript_name=HG00140_ch_T0000575;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000575:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6592082	6592209	.	-	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000575;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000575;transcript_name=HG00140_ch_T0000575;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000575:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6592210	6592287	.	-	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000575;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000575;transcript_name=HG00140_ch_T0000575;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000575:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6592288	6592894	.	-	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000575;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000575;transcript_name=HG00140_ch_T0000575;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000575:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6592895	6593360	.	-	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000575;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000575;transcript_name=HG00140_ch_T0000575;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000575:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6590623	6593382	1000	-	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000576;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_G0000156;transcript_name=HG00140_ch_T0000576;gene_name=ENSG00000301844;ID=HG00140_ch_T0000576;Name=ENSG00000301844
HG00140_chrY	CAT	exon	6590623	6590840	.	-	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000576;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000576;transcript_name=HG00140_ch_T0000576;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000576:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6590841	6591534	.	-	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000576;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000576;transcript_name=HG00140_ch_T0000576;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000576:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6591535	6591616	.	-	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000576;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000576;transcript_name=HG00140_ch_T0000576;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000576:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6591617	6591722	.	-	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000576;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000576;transcript_name=HG00140_ch_T0000576;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000576:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6591723	6592081	.	-	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000576;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000576;transcript_name=HG00140_ch_T0000576;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000576:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6592082	6592209	.	-	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000576;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000576;transcript_name=HG00140_ch_T0000576;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000576:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6592210	6592287	.	-	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000576;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000576;transcript_name=HG00140_ch_T0000576;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000576:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6592288	6592894	.	-	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000576;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000576;transcript_name=HG00140_ch_T0000576;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000576:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6592895	6593382	.	-	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000576;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000576;transcript_name=HG00140_ch_T0000576;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000576:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6590623	6593414	1000	-	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000577;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_G0000156;transcript_name=HG00140_ch_T0000577;gene_name=ENSG00000301844;ID=HG00140_ch_T0000577;Name=ENSG00000301844
HG00140_chrY	CAT	exon	6590623	6590840	.	-	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000577;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000577;transcript_name=HG00140_ch_T0000577;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000577:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6590841	6591534	.	-	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000577;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000577;transcript_name=HG00140_ch_T0000577;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000577:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6591535	6591616	.	-	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000577;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000577;transcript_name=HG00140_ch_T0000577;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000577:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6591617	6591722	.	-	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000577;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000577;transcript_name=HG00140_ch_T0000577;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000577:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6591723	6591861	.	-	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000577;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000577;transcript_name=HG00140_ch_T0000577;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000577:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6591862	6591969	.	-	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000577;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000577;transcript_name=HG00140_ch_T0000577;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000577:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6591970	6592081	.	-	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000577;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000577;transcript_name=HG00140_ch_T0000577;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000577:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6592082	6592209	.	-	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000577;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000577;transcript_name=HG00140_ch_T0000577;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000577:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6592210	6592287	.	-	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000577;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000577;transcript_name=HG00140_ch_T0000577;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000577:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6592288	6592894	.	-	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000577;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000577;transcript_name=HG00140_ch_T0000577;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000577:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6592895	6593414	.	-	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000577;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000577;transcript_name=HG00140_ch_T0000577;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000577:5;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6590623	6593380	1000	-	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000578;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_G0000156;transcript_name=HG00140_ch_T0000578;gene_name=ENSG00000301844;ID=HG00140_ch_T0000578;Name=ENSG00000301844
HG00140_chrY	CAT	exon	6590623	6590840	.	-	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000578;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000578;transcript_name=HG00140_ch_T0000578;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000578:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6590841	6591534	.	-	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000578;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000578;transcript_name=HG00140_ch_T0000578;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000578:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6591535	6591627	.	-	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000578;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000578;transcript_name=HG00140_ch_T0000578;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000578:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6591628	6591722	.	-	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000578;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000578;transcript_name=HG00140_ch_T0000578;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000578:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6591723	6591868	.	-	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000578;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000578;transcript_name=HG00140_ch_T0000578;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000578:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6591869	6591969	.	-	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000578;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000578;transcript_name=HG00140_ch_T0000578;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000578:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6591970	6592081	.	-	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000578;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000578;transcript_name=HG00140_ch_T0000578;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000578:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6592082	6592209	.	-	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000578;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000578;transcript_name=HG00140_ch_T0000578;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000578:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6592210	6592287	.	-	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000578;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000578;transcript_name=HG00140_ch_T0000578;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000578:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6592288	6592894	.	-	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000578;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000578;transcript_name=HG00140_ch_T0000578;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000578:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6592895	6593380	.	-	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000578;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000578;transcript_name=HG00140_ch_T0000578;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000578:5;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6590628	6593392	1000	-	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000579;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_G0000156;transcript_name=HG00140_ch_T0000579;gene_name=ENSG00000301844;ID=HG00140_ch_T0000579;Name=ENSG00000301844
HG00140_chrY	CAT	exon	6590628	6590840	.	-	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000579;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000579;transcript_name=HG00140_ch_T0000579;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000579:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6590841	6591534	.	-	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000579;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000579;transcript_name=HG00140_ch_T0000579;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000579:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6591535	6591868	.	-	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000579;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000579;transcript_name=HG00140_ch_T0000579;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000579:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6591869	6591969	.	-	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000579;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000579;transcript_name=HG00140_ch_T0000579;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000579:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6591970	6592081	.	-	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000579;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000579;transcript_name=HG00140_ch_T0000579;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000579:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6592082	6592209	.	-	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000579;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000579;transcript_name=HG00140_ch_T0000579;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000579:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6592210	6592287	.	-	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000579;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000579;transcript_name=HG00140_ch_T0000579;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000579:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6592288	6592894	.	-	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000579;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000579;transcript_name=HG00140_ch_T0000579;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000579:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6592895	6593392	.	-	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000579;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000579;transcript_name=HG00140_ch_T0000579;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000579:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6590630	6593380	1000	-	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000580;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_G0000156;transcript_name=HG00140_ch_T0000580;gene_name=ENSG00000301844;ID=HG00140_ch_T0000580;Name=ENSG00000301844
HG00140_chrY	CAT	exon	6590630	6590840	.	-	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000580;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000580;transcript_name=HG00140_ch_T0000580;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000580:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6590841	6591534	.	-	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000580;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000580;transcript_name=HG00140_ch_T0000580;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000580:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6591535	6592081	.	-	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000580;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000580;transcript_name=HG00140_ch_T0000580;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000580:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6592082	6592209	.	-	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000580;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000580;transcript_name=HG00140_ch_T0000580;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000580:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6592210	6592287	.	-	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000580;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000580;transcript_name=HG00140_ch_T0000580;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000580:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6592288	6592894	.	-	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000580;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000580;transcript_name=HG00140_ch_T0000580;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000580:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6592895	6593380	.	-	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000580;gene_id=HG00140_ch_G0000156;Parent=HG00140_ch_T0000580;transcript_name=HG00140_ch_T0000580;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000580:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6590630	6593380	.	-	.	source_gene_common_name=TSPY7P;source_gene=ENSG00000188656.8;gene_id=HG00140_ch_G0000157;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY7P;gene_sources=liftoff;ID=HG00140_ch_G0000157;Name=TSPY7P
HG00140_chrY	CAT	transcript	6590630	6593380	1000	-	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00140_ch_T0000581;gene_id=HG00140_ch_G0000157;Parent=HG00140_ch_G0000157;transcript_name=HG00140_ch_T0000581;gene_name=TSPY7P;ID=HG00140_ch_T0000581;Name=TSPY7P
HG00140_chrY	CAT	exon	6590630	6590840	.	-	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00140_ch_T0000581;gene_id=HG00140_ch_G0000157;Parent=HG00140_ch_T0000581;transcript_name=HG00140_ch_T0000581;gene_name=TSPY7P;ID=exon:HG00140_ch_T0000581:0;Name=TSPY7P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6590841	6591534	.	-	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00140_ch_T0000581;gene_id=HG00140_ch_G0000157;Parent=HG00140_ch_T0000581;transcript_name=HG00140_ch_T0000581;gene_name=TSPY7P;ID=intron:HG00140_ch_T0000581:0;Name=TSPY7P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6591535	6591616	.	-	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00140_ch_T0000581;gene_id=HG00140_ch_G0000157;Parent=HG00140_ch_T0000581;transcript_name=HG00140_ch_T0000581;gene_name=TSPY7P;ID=exon:HG00140_ch_T0000581:1;Name=TSPY7P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6591617	6591722	.	-	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00140_ch_T0000581;gene_id=HG00140_ch_G0000157;Parent=HG00140_ch_T0000581;transcript_name=HG00140_ch_T0000581;gene_name=TSPY7P;ID=intron:HG00140_ch_T0000581:1;Name=TSPY7P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6591723	6591868	.	-	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00140_ch_T0000581;gene_id=HG00140_ch_G0000157;Parent=HG00140_ch_T0000581;transcript_name=HG00140_ch_T0000581;gene_name=TSPY7P;ID=exon:HG00140_ch_T0000581:2;Name=TSPY7P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6591869	6591969	.	-	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00140_ch_T0000581;gene_id=HG00140_ch_G0000157;Parent=HG00140_ch_T0000581;transcript_name=HG00140_ch_T0000581;gene_name=TSPY7P;ID=intron:HG00140_ch_T0000581:2;Name=TSPY7P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6591970	6592081	.	-	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00140_ch_T0000581;gene_id=HG00140_ch_G0000157;Parent=HG00140_ch_T0000581;transcript_name=HG00140_ch_T0000581;gene_name=TSPY7P;ID=exon:HG00140_ch_T0000581:3;Name=TSPY7P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6592082	6592209	.	-	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00140_ch_T0000581;gene_id=HG00140_ch_G0000157;Parent=HG00140_ch_T0000581;transcript_name=HG00140_ch_T0000581;gene_name=TSPY7P;ID=intron:HG00140_ch_T0000581:3;Name=TSPY7P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6592210	6592287	.	-	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00140_ch_T0000581;gene_id=HG00140_ch_G0000157;Parent=HG00140_ch_T0000581;transcript_name=HG00140_ch_T0000581;gene_name=TSPY7P;ID=exon:HG00140_ch_T0000581:4;Name=TSPY7P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6592288	6592894	.	-	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00140_ch_T0000581;gene_id=HG00140_ch_G0000157;Parent=HG00140_ch_T0000581;transcript_name=HG00140_ch_T0000581;gene_name=TSPY7P;ID=intron:HG00140_ch_T0000581:4;Name=TSPY7P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6592895	6593380	.	-	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00140_ch_T0000581;gene_id=HG00140_ch_G0000157;Parent=HG00140_ch_T0000581;transcript_name=HG00140_ch_T0000581;gene_name=TSPY7P;ID=exon:HG00140_ch_T0000581:5;Name=TSPY7P;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6594379	6596372	.	+	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000234830.9_1;gene_id=HG00140_ch_G0000158;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG00140_ch_G0000158;Name=FAM197Y9
HG00140_chrY	CAT	transcript	6594379	6596372	1000	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000582;gene_id=HG00140_ch_G0000158;Parent=HG00140_ch_G0000158;transcript_name=HG00140_ch_T0000582;gene_name=FAM197Y9;ID=HG00140_ch_T0000582;Name=FAM197Y9
HG00140_chrY	CAT	exon	6594379	6594688	.	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000582;gene_id=HG00140_ch_G0000158;Parent=HG00140_ch_T0000582;transcript_name=HG00140_ch_T0000582;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000582:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6594689	6596030	.	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000582;gene_id=HG00140_ch_G0000158;Parent=HG00140_ch_T0000582;transcript_name=HG00140_ch_T0000582;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000582:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6596031	6596114	.	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000582;gene_id=HG00140_ch_G0000158;Parent=HG00140_ch_T0000582;transcript_name=HG00140_ch_T0000582;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000582:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6596115	6596226	.	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000582;gene_id=HG00140_ch_G0000158;Parent=HG00140_ch_T0000582;transcript_name=HG00140_ch_T0000582;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000582:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6596227	6596372	.	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000582;gene_id=HG00140_ch_G0000158;Parent=HG00140_ch_T0000582;transcript_name=HG00140_ch_T0000582;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000582:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6596021	6603714	.	+	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000290448.1_2;gene_id=HG00140_ch_G0000159;gene_biotype=lncRNA;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG00140_ch_G0000159;Name=FAM197Y9
HG00140_chrY	CAT	transcript	6596021	6603714	1000	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000583;gene_id=HG00140_ch_G0000159;Parent=HG00140_ch_G0000159;transcript_name=HG00140_ch_T0000583;gene_name=FAM197Y9;ID=HG00140_ch_T0000583;Name=FAM197Y9
HG00140_chrY	CAT	exon	6596021	6596140	.	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000583;gene_id=HG00140_ch_G0000159;Parent=HG00140_ch_T0000583;transcript_name=HG00140_ch_T0000583;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000583:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6596141	6597949	.	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000583;gene_id=HG00140_ch_G0000159;Parent=HG00140_ch_T0000583;transcript_name=HG00140_ch_T0000583;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000583:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6597950	6598035	.	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000583;gene_id=HG00140_ch_G0000159;Parent=HG00140_ch_T0000583;transcript_name=HG00140_ch_T0000583;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000583:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6598036	6601586	.	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000583;gene_id=HG00140_ch_G0000159;Parent=HG00140_ch_T0000583;transcript_name=HG00140_ch_T0000583;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000583:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6601587	6603714	.	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000583;gene_id=HG00140_ch_G0000159;Parent=HG00140_ch_T0000583;transcript_name=HG00140_ch_T0000583;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000583:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6596039	6601646	1000	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000584;gene_id=HG00140_ch_G0000159;Parent=HG00140_ch_G0000159;transcript_name=HG00140_ch_T0000584;gene_name=FAM197Y9;ID=HG00140_ch_T0000584;Name=FAM197Y9
HG00140_chrY	CAT	exon	6596039	6596140	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000584;gene_id=HG00140_ch_G0000159;Parent=HG00140_ch_T0000584;transcript_name=HG00140_ch_T0000584;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000584:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6596141	6596226	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000584;gene_id=HG00140_ch_G0000159;Parent=HG00140_ch_T0000584;transcript_name=HG00140_ch_T0000584;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000584:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6596227	6596372	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000584;gene_id=HG00140_ch_G0000159;Parent=HG00140_ch_T0000584;transcript_name=HG00140_ch_T0000584;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000584:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6596373	6597876	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000584;gene_id=HG00140_ch_G0000159;Parent=HG00140_ch_T0000584;transcript_name=HG00140_ch_T0000584;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000584:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6597877	6598035	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000584;gene_id=HG00140_ch_G0000159;Parent=HG00140_ch_T0000584;transcript_name=HG00140_ch_T0000584;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000584:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6598036	6601586	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000584;gene_id=HG00140_ch_G0000159;Parent=HG00140_ch_T0000584;transcript_name=HG00140_ch_T0000584;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000584:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6601587	6601646	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000584;gene_id=HG00140_ch_G0000159;Parent=HG00140_ch_T0000584;transcript_name=HG00140_ch_T0000584;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000584:3;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6610910	6613715	.	-	.	source_gene_common_name=ENSG00000301844;source_gene=ENSG00000301844.1;gene_id=HG00140_ch_G0000160;gene_biotype=lncRNA;gene_name=ENSG00000301844;gene_sources=liftoff;ID=HG00140_ch_G0000160;Name=ENSG00000301844
HG00140_chrY	CAT	transcript	6610910	6613715	1000	-	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000585;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_G0000160;transcript_name=HG00140_ch_T0000585;gene_name=ENSG00000301844;ID=HG00140_ch_T0000585;Name=ENSG00000301844
HG00140_chrY	CAT	exon	6610910	6611132	.	-	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000585;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000585;transcript_name=HG00140_ch_T0000585;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000585:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6611133	6611826	.	-	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000585;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000585;transcript_name=HG00140_ch_T0000585;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000585:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6611827	6611908	.	-	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000585;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000585;transcript_name=HG00140_ch_T0000585;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000585:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6611909	6612014	.	-	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000585;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000585;transcript_name=HG00140_ch_T0000585;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000585:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6612015	6612160	.	-	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000585;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000585;transcript_name=HG00140_ch_T0000585;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000585:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6612161	6612261	.	-	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000585;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000585;transcript_name=HG00140_ch_T0000585;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000585:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6612262	6612373	.	-	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000585;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000585;transcript_name=HG00140_ch_T0000585;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000585:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6612374	6612501	.	-	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000585;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000585;transcript_name=HG00140_ch_T0000585;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000585:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6612502	6612579	.	-	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000585;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000585;transcript_name=HG00140_ch_T0000585;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000585:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6612580	6613186	.	-	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000585;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000585;transcript_name=HG00140_ch_T0000585;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000585:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6613187	6613715	.	-	.	source_transcript=ENST00000782187.1;source_transcript_name=ENST00000782187;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000585;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000585;transcript_name=HG00140_ch_T0000585;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000585:5;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6610915	6613652	1000	-	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000586;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_G0000160;transcript_name=HG00140_ch_T0000586;gene_name=ENSG00000301844;ID=HG00140_ch_T0000586;Name=ENSG00000301844
HG00140_chrY	CAT	exon	6610915	6611132	.	-	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000586;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000586;transcript_name=HG00140_ch_T0000586;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000586:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6611133	6611826	.	-	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000586;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000586;transcript_name=HG00140_ch_T0000586;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000586:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6611827	6611919	.	-	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000586;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000586;transcript_name=HG00140_ch_T0000586;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000586:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6611920	6612014	.	-	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000586;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000586;transcript_name=HG00140_ch_T0000586;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000586:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6612015	6612373	.	-	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000586;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000586;transcript_name=HG00140_ch_T0000586;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000586:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6612374	6612501	.	-	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000586;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000586;transcript_name=HG00140_ch_T0000586;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000586:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6612502	6612579	.	-	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000586;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000586;transcript_name=HG00140_ch_T0000586;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000586:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6612580	6613186	.	-	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000586;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000586;transcript_name=HG00140_ch_T0000586;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000586:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6613187	6613652	.	-	.	source_transcript=ENST00000782193.1;source_transcript_name=ENST00000782193;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000586;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000586;transcript_name=HG00140_ch_T0000586;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000586:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6610915	6613672	1000	-	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000587;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_G0000160;transcript_name=HG00140_ch_T0000587;gene_name=ENSG00000301844;ID=HG00140_ch_T0000587;Name=ENSG00000301844
HG00140_chrY	CAT	exon	6610915	6611132	.	-	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000587;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000587;transcript_name=HG00140_ch_T0000587;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000587:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6611133	6611826	.	-	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000587;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000587;transcript_name=HG00140_ch_T0000587;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000587:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6611827	6611919	.	-	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000587;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000587;transcript_name=HG00140_ch_T0000587;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000587:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6611920	6612014	.	-	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000587;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000587;transcript_name=HG00140_ch_T0000587;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000587:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6612015	6612160	.	-	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000587;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000587;transcript_name=HG00140_ch_T0000587;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000587:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6612161	6612261	.	-	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000587;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000587;transcript_name=HG00140_ch_T0000587;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000587:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6612262	6612373	.	-	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000587;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000587;transcript_name=HG00140_ch_T0000587;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000587:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6612374	6612501	.	-	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000587;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000587;transcript_name=HG00140_ch_T0000587;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000587:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6612502	6612579	.	-	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000587;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000587;transcript_name=HG00140_ch_T0000587;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000587:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6612580	6613186	.	-	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000587;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000587;transcript_name=HG00140_ch_T0000587;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000587:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6613187	6613672	.	-	.	source_transcript=ENST00000782191.1;source_transcript_name=ENST00000782191;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000587;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000587;transcript_name=HG00140_ch_T0000587;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000587:5;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6610915	6613706	1000	-	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000588;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_G0000160;transcript_name=HG00140_ch_T0000588;gene_name=ENSG00000301844;ID=HG00140_ch_T0000588;Name=ENSG00000301844
HG00140_chrY	CAT	exon	6610915	6611132	.	-	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000588;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000588;transcript_name=HG00140_ch_T0000588;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000588:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6611133	6611826	.	-	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000588;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000588;transcript_name=HG00140_ch_T0000588;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000588:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6611827	6611908	.	-	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000588;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000588;transcript_name=HG00140_ch_T0000588;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000588:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6611909	6612014	.	-	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000588;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000588;transcript_name=HG00140_ch_T0000588;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000588:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6612015	6612153	.	-	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000588;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000588;transcript_name=HG00140_ch_T0000588;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000588:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6612154	6612261	.	-	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000588;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000588;transcript_name=HG00140_ch_T0000588;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000588:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6612262	6612373	.	-	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000588;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000588;transcript_name=HG00140_ch_T0000588;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000588:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6612374	6612501	.	-	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000588;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000588;transcript_name=HG00140_ch_T0000588;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000588:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6612502	6612579	.	-	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000588;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000588;transcript_name=HG00140_ch_T0000588;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000588:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6612580	6613186	.	-	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000588;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000588;transcript_name=HG00140_ch_T0000588;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000588:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6613187	6613706	.	-	.	source_transcript=ENST00000782188.1;source_transcript_name=ENST00000782188;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000588;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000588;transcript_name=HG00140_ch_T0000588;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000588:5;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6610915	6613674	1000	-	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000589;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_G0000160;transcript_name=HG00140_ch_T0000589;gene_name=ENSG00000301844;ID=HG00140_ch_T0000589;Name=ENSG00000301844
HG00140_chrY	CAT	exon	6610915	6611132	.	-	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000589;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000589;transcript_name=HG00140_ch_T0000589;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000589:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6611133	6611826	.	-	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000589;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000589;transcript_name=HG00140_ch_T0000589;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000589:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6611827	6611908	.	-	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000589;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000589;transcript_name=HG00140_ch_T0000589;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000589:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6611909	6612014	.	-	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000589;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000589;transcript_name=HG00140_ch_T0000589;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000589:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6612015	6612373	.	-	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000589;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000589;transcript_name=HG00140_ch_T0000589;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000589:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6612374	6612501	.	-	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000589;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000589;transcript_name=HG00140_ch_T0000589;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000589:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6612502	6612579	.	-	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000589;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000589;transcript_name=HG00140_ch_T0000589;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000589:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6612580	6613186	.	-	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000589;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000589;transcript_name=HG00140_ch_T0000589;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000589:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6613187	6613674	.	-	.	source_transcript=ENST00000782190.1;source_transcript_name=ENST00000782190;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000589;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000589;transcript_name=HG00140_ch_T0000589;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000589:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6610920	6613684	1000	-	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000590;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_G0000160;transcript_name=HG00140_ch_T0000590;gene_name=ENSG00000301844;ID=HG00140_ch_T0000590;Name=ENSG00000301844
HG00140_chrY	CAT	exon	6610920	6611132	.	-	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000590;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000590;transcript_name=HG00140_ch_T0000590;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000590:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6611133	6611826	.	-	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000590;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000590;transcript_name=HG00140_ch_T0000590;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000590:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6611827	6612160	.	-	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000590;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000590;transcript_name=HG00140_ch_T0000590;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000590:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6612161	6612261	.	-	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000590;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000590;transcript_name=HG00140_ch_T0000590;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000590:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6612262	6612373	.	-	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000590;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000590;transcript_name=HG00140_ch_T0000590;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000590:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6612374	6612501	.	-	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000590;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000590;transcript_name=HG00140_ch_T0000590;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000590:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6612502	6612579	.	-	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000590;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000590;transcript_name=HG00140_ch_T0000590;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000590:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6612580	6613186	.	-	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000590;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000590;transcript_name=HG00140_ch_T0000590;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000590:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6613187	6613684	.	-	.	source_transcript=ENST00000782189.1;source_transcript_name=ENST00000782189;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000590;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000590;transcript_name=HG00140_ch_T0000590;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000590:4;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6610922	6613672	1000	-	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000591;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_G0000160;transcript_name=HG00140_ch_T0000591;gene_name=ENSG00000301844;ID=HG00140_ch_T0000591;Name=ENSG00000301844
HG00140_chrY	CAT	exon	6610922	6611132	.	-	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000591;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000591;transcript_name=HG00140_ch_T0000591;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000591:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6611133	6611826	.	-	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000591;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000591;transcript_name=HG00140_ch_T0000591;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000591:0;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6611827	6612373	.	-	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000591;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000591;transcript_name=HG00140_ch_T0000591;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000591:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6612374	6612501	.	-	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000591;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000591;transcript_name=HG00140_ch_T0000591;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000591:1;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6612502	6612579	.	-	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000591;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000591;transcript_name=HG00140_ch_T0000591;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000591:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6612580	6613186	.	-	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000591;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000591;transcript_name=HG00140_ch_T0000591;gene_name=ENSG00000301844;ID=intron:HG00140_ch_T0000591:2;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6613187	6613672	.	-	.	source_transcript=ENST00000782192.1;source_transcript_name=ENST00000782192;source_gene=ENSG00000301844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000782192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000782192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301844;transcript_id=HG00140_ch_T0000591;gene_id=HG00140_ch_G0000160;Parent=HG00140_ch_T0000591;transcript_name=HG00140_ch_T0000591;gene_name=ENSG00000301844;ID=exon:HG00140_ch_T0000591:3;Name=ENSG00000301844;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6610922	6613672	.	-	.	source_gene_common_name=TSPY7P;source_gene=ENSG00000188656.8;gene_id=HG00140_ch_G0000161;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY7P;gene_sources=liftoff;ID=HG00140_ch_G0000161;Name=TSPY7P
HG00140_chrY	CAT	transcript	6610922	6613672	1000	-	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00140_ch_T0000592;gene_id=HG00140_ch_G0000161;Parent=HG00140_ch_G0000161;transcript_name=HG00140_ch_T0000592;gene_name=TSPY7P;ID=HG00140_ch_T0000592;Name=TSPY7P
HG00140_chrY	CAT	exon	6610922	6611132	.	-	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00140_ch_T0000592;gene_id=HG00140_ch_G0000161;Parent=HG00140_ch_T0000592;transcript_name=HG00140_ch_T0000592;gene_name=TSPY7P;ID=exon:HG00140_ch_T0000592:0;Name=TSPY7P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6611133	6611826	.	-	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00140_ch_T0000592;gene_id=HG00140_ch_G0000161;Parent=HG00140_ch_T0000592;transcript_name=HG00140_ch_T0000592;gene_name=TSPY7P;ID=intron:HG00140_ch_T0000592:0;Name=TSPY7P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6611827	6611908	.	-	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00140_ch_T0000592;gene_id=HG00140_ch_G0000161;Parent=HG00140_ch_T0000592;transcript_name=HG00140_ch_T0000592;gene_name=TSPY7P;ID=exon:HG00140_ch_T0000592:1;Name=TSPY7P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6611909	6612014	.	-	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00140_ch_T0000592;gene_id=HG00140_ch_G0000161;Parent=HG00140_ch_T0000592;transcript_name=HG00140_ch_T0000592;gene_name=TSPY7P;ID=intron:HG00140_ch_T0000592:1;Name=TSPY7P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6612015	6612160	.	-	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00140_ch_T0000592;gene_id=HG00140_ch_G0000161;Parent=HG00140_ch_T0000592;transcript_name=HG00140_ch_T0000592;gene_name=TSPY7P;ID=exon:HG00140_ch_T0000592:2;Name=TSPY7P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6612161	6612261	.	-	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00140_ch_T0000592;gene_id=HG00140_ch_G0000161;Parent=HG00140_ch_T0000592;transcript_name=HG00140_ch_T0000592;gene_name=TSPY7P;ID=intron:HG00140_ch_T0000592:2;Name=TSPY7P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6612262	6612373	.	-	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00140_ch_T0000592;gene_id=HG00140_ch_G0000161;Parent=HG00140_ch_T0000592;transcript_name=HG00140_ch_T0000592;gene_name=TSPY7P;ID=exon:HG00140_ch_T0000592:3;Name=TSPY7P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6612374	6612501	.	-	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00140_ch_T0000592;gene_id=HG00140_ch_G0000161;Parent=HG00140_ch_T0000592;transcript_name=HG00140_ch_T0000592;gene_name=TSPY7P;ID=intron:HG00140_ch_T0000592:3;Name=TSPY7P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6612502	6612579	.	-	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00140_ch_T0000592;gene_id=HG00140_ch_G0000161;Parent=HG00140_ch_T0000592;transcript_name=HG00140_ch_T0000592;gene_name=TSPY7P;ID=exon:HG00140_ch_T0000592:4;Name=TSPY7P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6612580	6613186	.	-	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00140_ch_T0000592;gene_id=HG00140_ch_G0000161;Parent=HG00140_ch_T0000592;transcript_name=HG00140_ch_T0000592;gene_name=TSPY7P;ID=intron:HG00140_ch_T0000592:4;Name=TSPY7P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6613187	6613672	.	-	.	source_transcript=ENST00000431358.2;source_transcript_name=TSPY7P-201;source_gene=ENSG00000188656.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188656.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000431358.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431358.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY7P;transcript_id=HG00140_ch_T0000592;gene_id=HG00140_ch_G0000161;Parent=HG00140_ch_T0000592;transcript_name=HG00140_ch_T0000592;gene_name=TSPY7P;ID=exon:HG00140_ch_T0000592:5;Name=TSPY7P;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6614672	6616664	.	+	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_4;gene_id=HG00140_ch_G0000162;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG00140_ch_G0000162;Name=FAM197Y5
HG00140_chrY	CAT	transcript	6614672	6616664	1000	+	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000593;gene_id=HG00140_ch_G0000162;Parent=HG00140_ch_G0000162;transcript_name=HG00140_ch_T0000593;gene_name=FAM197Y5;ID=HG00140_ch_T0000593;Name=FAM197Y5
HG00140_chrY	CAT	exon	6614672	6614982	.	+	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000593;gene_id=HG00140_ch_G0000162;Parent=HG00140_ch_T0000593;transcript_name=HG00140_ch_T0000593;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000593:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6614983	6616518	.	+	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000593;gene_id=HG00140_ch_G0000162;Parent=HG00140_ch_T0000593;transcript_name=HG00140_ch_T0000593;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000593:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6616519	6616664	.	+	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000593;gene_id=HG00140_ch_G0000162;Parent=HG00140_ch_T0000593;transcript_name=HG00140_ch_T0000593;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000593:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6616319	6622063	.	+	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1_7;gene_id=HG00140_ch_G0000163;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG00140_ch_G0000163;Name=FAM197Y5
HG00140_chrY	CAT	transcript	6616319	6622063	1000	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000594;gene_id=HG00140_ch_G0000163;Parent=HG00140_ch_G0000163;transcript_name=HG00140_ch_T0000594;gene_name=FAM197Y5;ID=HG00140_ch_T0000594;Name=FAM197Y5
HG00140_chrY	CAT	exon	6616319	6616432	.	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000594;gene_id=HG00140_ch_G0000163;Parent=HG00140_ch_T0000594;transcript_name=HG00140_ch_T0000594;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000594:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6616433	6618233	.	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000594;gene_id=HG00140_ch_G0000163;Parent=HG00140_ch_T0000594;transcript_name=HG00140_ch_T0000594;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000594:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6618234	6618319	.	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000594;gene_id=HG00140_ch_G0000163;Parent=HG00140_ch_T0000594;transcript_name=HG00140_ch_T0000594;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000594:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6618320	6621873	.	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000594;gene_id=HG00140_ch_G0000163;Parent=HG00140_ch_T0000594;transcript_name=HG00140_ch_T0000594;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000594:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6621874	6622063	.	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000594;gene_id=HG00140_ch_G0000163;Parent=HG00140_ch_T0000594;transcript_name=HG00140_ch_T0000594;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000594:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6616331	6621933	1000	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000595;gene_id=HG00140_ch_G0000163;Parent=HG00140_ch_G0000163;transcript_name=HG00140_ch_T0000595;gene_name=FAM197Y5;ID=HG00140_ch_T0000595;Name=FAM197Y5
HG00140_chrY	CAT	exon	6616331	6616432	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000595;gene_id=HG00140_ch_G0000163;Parent=HG00140_ch_T0000595;transcript_name=HG00140_ch_T0000595;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000595:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6616433	6616518	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000595;gene_id=HG00140_ch_G0000163;Parent=HG00140_ch_T0000595;transcript_name=HG00140_ch_T0000595;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000595:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6616519	6616664	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000595;gene_id=HG00140_ch_G0000163;Parent=HG00140_ch_T0000595;transcript_name=HG00140_ch_T0000595;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000595:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6616665	6618160	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000595;gene_id=HG00140_ch_G0000163;Parent=HG00140_ch_T0000595;transcript_name=HG00140_ch_T0000595;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000595:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6618161	6618319	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000595;gene_id=HG00140_ch_G0000163;Parent=HG00140_ch_T0000595;transcript_name=HG00140_ch_T0000595;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000595:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6618320	6621873	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000595;gene_id=HG00140_ch_G0000163;Parent=HG00140_ch_T0000595;transcript_name=HG00140_ch_T0000595;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000595:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6621874	6621933	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000595;gene_id=HG00140_ch_G0000163;Parent=HG00140_ch_T0000595;transcript_name=HG00140_ch_T0000595;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000595:3;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6631224	6634038	.	-	.	source_gene_common_name=TSPY9;source_gene=ENSG00000238074.6;gene_id=HG00140_ch_G0000164;gene_biotype=protein_coding;gene_name=TSPY9;gene_sources=liftoff;ID=HG00140_ch_G0000164;Name=TSPY9
HG00140_chrY	CAT	transcript	6631224	6634038	100	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000596;gene_id=HG00140_ch_G0000164;Parent=HG00140_ch_G0000164;transcript_name=HG00140_ch_T0000596;gene_name=TSPY9;ID=HG00140_ch_T0000596;Name=TSPY9
HG00140_chrY	CAT	exon	6631224	6631434	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000596;gene_id=HG00140_ch_G0000164;Parent=HG00140_ch_T0000596;transcript_name=HG00140_ch_T0000596;gene_name=TSPY9;ID=exon:HG00140_ch_T0000596:0;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6631412	6631434	.	-	2	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000596;gene_id=HG00140_ch_G0000164;Parent=HG00140_ch_T0000596;transcript_name=HG00140_ch_T0000596;gene_name=TSPY9;ID=CDS:HG00140_ch_T0000596:0;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6631412	6631414	.	-	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000596;gene_id=HG00140_ch_G0000164;Parent=HG00140_ch_T0000596;transcript_name=HG00140_ch_T0000596;gene_name=TSPY9;ID=stop_codon:HG00140_ch_T0000596;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6631435	6632128	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000596;gene_id=HG00140_ch_G0000164;Parent=HG00140_ch_T0000596;transcript_name=HG00140_ch_T0000596;gene_name=TSPY9;ID=intron:HG00140_ch_T0000596:0;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6632129	6632210	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000596;gene_id=HG00140_ch_G0000164;Parent=HG00140_ch_T0000596;transcript_name=HG00140_ch_T0000596;gene_name=TSPY9;ID=exon:HG00140_ch_T0000596:1;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6632129	6632210	.	-	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000596;gene_id=HG00140_ch_G0000164;Parent=HG00140_ch_T0000596;transcript_name=HG00140_ch_T0000596;gene_name=TSPY9;ID=CDS:HG00140_ch_T0000596:1;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6632211	6632316	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000596;gene_id=HG00140_ch_G0000164;Parent=HG00140_ch_T0000596;transcript_name=HG00140_ch_T0000596;gene_name=TSPY9;ID=intron:HG00140_ch_T0000596:1;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6632317	6632462	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000596;gene_id=HG00140_ch_G0000164;Parent=HG00140_ch_T0000596;transcript_name=HG00140_ch_T0000596;gene_name=TSPY9;ID=exon:HG00140_ch_T0000596:2;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6632317	6632462	.	-	2	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000596;gene_id=HG00140_ch_G0000164;Parent=HG00140_ch_T0000596;transcript_name=HG00140_ch_T0000596;gene_name=TSPY9;ID=CDS:HG00140_ch_T0000596:2;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6632463	6632563	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000596;gene_id=HG00140_ch_G0000164;Parent=HG00140_ch_T0000596;transcript_name=HG00140_ch_T0000596;gene_name=TSPY9;ID=intron:HG00140_ch_T0000596:2;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6632564	6632675	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000596;gene_id=HG00140_ch_G0000164;Parent=HG00140_ch_T0000596;transcript_name=HG00140_ch_T0000596;gene_name=TSPY9;ID=exon:HG00140_ch_T0000596:3;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6632564	6632675	.	-	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000596;gene_id=HG00140_ch_G0000164;Parent=HG00140_ch_T0000596;transcript_name=HG00140_ch_T0000596;gene_name=TSPY9;ID=CDS:HG00140_ch_T0000596:3;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6632676	6632803	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000596;gene_id=HG00140_ch_G0000164;Parent=HG00140_ch_T0000596;transcript_name=HG00140_ch_T0000596;gene_name=TSPY9;ID=intron:HG00140_ch_T0000596:3;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6632804	6632881	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000596;gene_id=HG00140_ch_G0000164;Parent=HG00140_ch_T0000596;transcript_name=HG00140_ch_T0000596;gene_name=TSPY9;ID=exon:HG00140_ch_T0000596:4;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6632804	6632881	.	-	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000596;gene_id=HG00140_ch_G0000164;Parent=HG00140_ch_T0000596;transcript_name=HG00140_ch_T0000596;gene_name=TSPY9;ID=CDS:HG00140_ch_T0000596:4;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6632882	6633488	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000596;gene_id=HG00140_ch_G0000164;Parent=HG00140_ch_T0000596;transcript_name=HG00140_ch_T0000596;gene_name=TSPY9;ID=intron:HG00140_ch_T0000596:4;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6633489	6634038	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000596;gene_id=HG00140_ch_G0000164;Parent=HG00140_ch_T0000596;transcript_name=HG00140_ch_T0000596;gene_name=TSPY9;ID=exon:HG00140_ch_T0000596:5;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6633489	6633992	.	-	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000596;gene_id=HG00140_ch_G0000164;Parent=HG00140_ch_T0000596;transcript_name=HG00140_ch_T0000596;gene_name=TSPY9;ID=CDS:HG00140_ch_T0000596:5;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6633990	6633992	.	-	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000596;gene_id=HG00140_ch_G0000164;Parent=HG00140_ch_T0000596;transcript_name=HG00140_ch_T0000596;gene_name=TSPY9;ID=start_codon:HG00140_ch_T0000596;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6635021	6636989	.	+	.	source_gene_common_name=FAM197Y8;source_gene=ENSG00000225560.7;gene_id=HG00140_ch_G0000165;gene_biotype=transcribed_processed_pseudogene;gene_name=FAM197Y8;gene_sources=liftoff;ID=HG00140_ch_G0000165;Name=FAM197Y8
HG00140_chrY	CAT	transcript	6635021	6636989	1000	+	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00140_ch_T0000597;gene_id=HG00140_ch_G0000165;Parent=HG00140_ch_G0000165;transcript_name=HG00140_ch_T0000597;gene_name=FAM197Y8;ID=HG00140_ch_T0000597;Name=FAM197Y8
HG00140_chrY	CAT	exon	6635021	6635321	.	+	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00140_ch_T0000597;gene_id=HG00140_ch_G0000165;Parent=HG00140_ch_T0000597;transcript_name=HG00140_ch_T0000597;gene_name=FAM197Y8;ID=exon:HG00140_ch_T0000597:0;Name=FAM197Y8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6635322	6636644	.	+	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00140_ch_T0000597;gene_id=HG00140_ch_G0000165;Parent=HG00140_ch_T0000597;transcript_name=HG00140_ch_T0000597;gene_name=FAM197Y8;ID=intron:HG00140_ch_T0000597:0;Name=FAM197Y8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6636645	6636754	.	+	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00140_ch_T0000597;gene_id=HG00140_ch_G0000165;Parent=HG00140_ch_T0000597;transcript_name=HG00140_ch_T0000597;gene_name=FAM197Y8;ID=exon:HG00140_ch_T0000597:1;Name=FAM197Y8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6636755	6636840	.	+	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00140_ch_T0000597;gene_id=HG00140_ch_G0000165;Parent=HG00140_ch_T0000597;transcript_name=HG00140_ch_T0000597;gene_name=FAM197Y8;ID=intron:HG00140_ch_T0000597:1;Name=FAM197Y8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6636841	6636989	.	+	.	source_transcript=ENST00000450145.2;source_transcript_name=FAM197Y8-201;source_gene=ENSG00000225560.7;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000225560.7;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000450145.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000450145.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00140_ch_T0000597;gene_id=HG00140_ch_G0000165;Parent=HG00140_ch_T0000597;transcript_name=HG00140_ch_T0000597;gene_name=FAM197Y8;ID=exon:HG00140_ch_T0000597:2;Name=FAM197Y8;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6636434	6644308	.	+	.	source_gene_common_name=FAM197Y8;source_gene=ENSG00000293362.1;gene_id=HG00140_ch_G0000166;gene_biotype=lncRNA;gene_name=FAM197Y8;gene_sources=liftoff;ID=HG00140_ch_G0000166;Name=FAM197Y8
HG00140_chrY	CAT	transcript	6636434	6644308	1000	+	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00140_ch_T0000598;gene_id=HG00140_ch_G0000166;Parent=HG00140_ch_G0000166;transcript_name=HG00140_ch_T0000598;gene_name=FAM197Y8;ID=HG00140_ch_T0000598;Name=FAM197Y8
HG00140_chrY	CAT	exon	6636434	6636448	.	+	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00140_ch_T0000598;gene_id=HG00140_ch_G0000166;Parent=HG00140_ch_T0000598;transcript_name=HG00140_ch_T0000598;gene_name=FAM197Y8;ID=exon:HG00140_ch_T0000598:0;Name=FAM197Y8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6636449	6636644	.	+	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00140_ch_T0000598;gene_id=HG00140_ch_G0000166;Parent=HG00140_ch_T0000598;transcript_name=HG00140_ch_T0000598;gene_name=FAM197Y8;ID=intron:HG00140_ch_T0000598:0;Name=FAM197Y8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6636645	6636754	.	+	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00140_ch_T0000598;gene_id=HG00140_ch_G0000166;Parent=HG00140_ch_T0000598;transcript_name=HG00140_ch_T0000598;gene_name=FAM197Y8;ID=exon:HG00140_ch_T0000598:1;Name=FAM197Y8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6636755	6638559	.	+	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00140_ch_T0000598;gene_id=HG00140_ch_G0000166;Parent=HG00140_ch_T0000598;transcript_name=HG00140_ch_T0000598;gene_name=FAM197Y8;ID=intron:HG00140_ch_T0000598:1;Name=FAM197Y8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6638560	6638645	.	+	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00140_ch_T0000598;gene_id=HG00140_ch_G0000166;Parent=HG00140_ch_T0000598;transcript_name=HG00140_ch_T0000598;gene_name=FAM197Y8;ID=exon:HG00140_ch_T0000598:2;Name=FAM197Y8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6638646	6642194	.	+	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00140_ch_T0000598;gene_id=HG00140_ch_G0000166;Parent=HG00140_ch_T0000598;transcript_name=HG00140_ch_T0000598;gene_name=FAM197Y8;ID=intron:HG00140_ch_T0000598:2;Name=FAM197Y8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6642195	6644308	.	+	.	source_transcript=ENST00000426661.5;source_transcript_name=FAM197Y8-205;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000426661.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000426661.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00140_ch_T0000598;gene_id=HG00140_ch_G0000166;Parent=HG00140_ch_T0000598;transcript_name=HG00140_ch_T0000598;gene_name=FAM197Y8;ID=exon:HG00140_ch_T0000598:3;Name=FAM197Y8;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6636653	6642255	1000	+	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00140_ch_T0000599;gene_id=HG00140_ch_G0000166;Parent=HG00140_ch_G0000166;transcript_name=HG00140_ch_T0000599;gene_name=FAM197Y8;ID=HG00140_ch_T0000599;Name=FAM197Y8
HG00140_chrY	CAT	exon	6636653	6636754	.	+	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00140_ch_T0000599;gene_id=HG00140_ch_G0000166;Parent=HG00140_ch_T0000599;transcript_name=HG00140_ch_T0000599;gene_name=FAM197Y8;ID=exon:HG00140_ch_T0000599:0;Name=FAM197Y8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6636755	6636840	.	+	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00140_ch_T0000599;gene_id=HG00140_ch_G0000166;Parent=HG00140_ch_T0000599;transcript_name=HG00140_ch_T0000599;gene_name=FAM197Y8;ID=intron:HG00140_ch_T0000599:0;Name=FAM197Y8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6636841	6636986	.	+	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00140_ch_T0000599;gene_id=HG00140_ch_G0000166;Parent=HG00140_ch_T0000599;transcript_name=HG00140_ch_T0000599;gene_name=FAM197Y8;ID=exon:HG00140_ch_T0000599:1;Name=FAM197Y8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6636987	6638486	.	+	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00140_ch_T0000599;gene_id=HG00140_ch_G0000166;Parent=HG00140_ch_T0000599;transcript_name=HG00140_ch_T0000599;gene_name=FAM197Y8;ID=intron:HG00140_ch_T0000599:1;Name=FAM197Y8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6638487	6638645	.	+	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00140_ch_T0000599;gene_id=HG00140_ch_G0000166;Parent=HG00140_ch_T0000599;transcript_name=HG00140_ch_T0000599;gene_name=FAM197Y8;ID=exon:HG00140_ch_T0000599:2;Name=FAM197Y8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6638646	6642194	.	+	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00140_ch_T0000599;gene_id=HG00140_ch_G0000166;Parent=HG00140_ch_T0000599;transcript_name=HG00140_ch_T0000599;gene_name=FAM197Y8;ID=intron:HG00140_ch_T0000599:2;Name=FAM197Y8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6642195	6642255	.	+	.	source_transcript=ENST00000432394.1;source_transcript_name=FAM197Y8-206;source_gene=ENSG00000293362.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293362.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000432394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;transcript_id=HG00140_ch_T0000599;gene_id=HG00140_ch_G0000166;Parent=HG00140_ch_T0000599;transcript_name=HG00140_ch_T0000599;gene_name=FAM197Y8;ID=exon:HG00140_ch_T0000599:3;Name=FAM197Y8;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6651524	6654338	.	-	.	source_gene_common_name=TSPY9;source_gene=ENSG00000238074.6;gene_id=HG00140_ch_G0000167;gene_biotype=protein_coding;gene_name=TSPY9;gene_sources=liftoff;ID=HG00140_ch_G0000167;Name=TSPY9
HG00140_chrY	CAT	transcript	6651524	6654338	100	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000600;gene_id=HG00140_ch_G0000167;Parent=HG00140_ch_G0000167;transcript_name=HG00140_ch_T0000600;gene_name=TSPY9;ID=HG00140_ch_T0000600;Name=TSPY9
HG00140_chrY	CAT	exon	6651524	6651734	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000600;gene_id=HG00140_ch_G0000167;Parent=HG00140_ch_T0000600;transcript_name=HG00140_ch_T0000600;gene_name=TSPY9;ID=exon:HG00140_ch_T0000600:0;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6651712	6651734	.	-	2	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000600;gene_id=HG00140_ch_G0000167;Parent=HG00140_ch_T0000600;transcript_name=HG00140_ch_T0000600;gene_name=TSPY9;ID=CDS:HG00140_ch_T0000600:0;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6651712	6651714	.	-	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000600;gene_id=HG00140_ch_G0000167;Parent=HG00140_ch_T0000600;transcript_name=HG00140_ch_T0000600;gene_name=TSPY9;ID=stop_codon:HG00140_ch_T0000600;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6651735	6652428	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000600;gene_id=HG00140_ch_G0000167;Parent=HG00140_ch_T0000600;transcript_name=HG00140_ch_T0000600;gene_name=TSPY9;ID=intron:HG00140_ch_T0000600:0;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6652429	6652510	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000600;gene_id=HG00140_ch_G0000167;Parent=HG00140_ch_T0000600;transcript_name=HG00140_ch_T0000600;gene_name=TSPY9;ID=exon:HG00140_ch_T0000600:1;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6652429	6652510	.	-	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000600;gene_id=HG00140_ch_G0000167;Parent=HG00140_ch_T0000600;transcript_name=HG00140_ch_T0000600;gene_name=TSPY9;ID=CDS:HG00140_ch_T0000600:1;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6652511	6652616	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000600;gene_id=HG00140_ch_G0000167;Parent=HG00140_ch_T0000600;transcript_name=HG00140_ch_T0000600;gene_name=TSPY9;ID=intron:HG00140_ch_T0000600:1;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6652617	6652762	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000600;gene_id=HG00140_ch_G0000167;Parent=HG00140_ch_T0000600;transcript_name=HG00140_ch_T0000600;gene_name=TSPY9;ID=exon:HG00140_ch_T0000600:2;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6652617	6652762	.	-	2	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000600;gene_id=HG00140_ch_G0000167;Parent=HG00140_ch_T0000600;transcript_name=HG00140_ch_T0000600;gene_name=TSPY9;ID=CDS:HG00140_ch_T0000600:2;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6652763	6652863	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000600;gene_id=HG00140_ch_G0000167;Parent=HG00140_ch_T0000600;transcript_name=HG00140_ch_T0000600;gene_name=TSPY9;ID=intron:HG00140_ch_T0000600:2;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6652864	6652975	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000600;gene_id=HG00140_ch_G0000167;Parent=HG00140_ch_T0000600;transcript_name=HG00140_ch_T0000600;gene_name=TSPY9;ID=exon:HG00140_ch_T0000600:3;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6652864	6652975	.	-	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000600;gene_id=HG00140_ch_G0000167;Parent=HG00140_ch_T0000600;transcript_name=HG00140_ch_T0000600;gene_name=TSPY9;ID=CDS:HG00140_ch_T0000600:3;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6652976	6653103	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000600;gene_id=HG00140_ch_G0000167;Parent=HG00140_ch_T0000600;transcript_name=HG00140_ch_T0000600;gene_name=TSPY9;ID=intron:HG00140_ch_T0000600:3;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6653104	6653181	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000600;gene_id=HG00140_ch_G0000167;Parent=HG00140_ch_T0000600;transcript_name=HG00140_ch_T0000600;gene_name=TSPY9;ID=exon:HG00140_ch_T0000600:4;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6653104	6653181	.	-	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000600;gene_id=HG00140_ch_G0000167;Parent=HG00140_ch_T0000600;transcript_name=HG00140_ch_T0000600;gene_name=TSPY9;ID=CDS:HG00140_ch_T0000600:4;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6653182	6653788	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000600;gene_id=HG00140_ch_G0000167;Parent=HG00140_ch_T0000600;transcript_name=HG00140_ch_T0000600;gene_name=TSPY9;ID=intron:HG00140_ch_T0000600:4;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6653789	6654338	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000600;gene_id=HG00140_ch_G0000167;Parent=HG00140_ch_T0000600;transcript_name=HG00140_ch_T0000600;gene_name=TSPY9;ID=exon:HG00140_ch_T0000600:5;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6653789	6654292	.	-	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000600;gene_id=HG00140_ch_G0000167;Parent=HG00140_ch_T0000600;transcript_name=HG00140_ch_T0000600;gene_name=TSPY9;ID=CDS:HG00140_ch_T0000600:5;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6654290	6654292	.	-	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000600;gene_id=HG00140_ch_G0000167;Parent=HG00140_ch_T0000600;transcript_name=HG00140_ch_T0000600;gene_name=TSPY9;ID=start_codon:HG00140_ch_T0000600;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6655292	6657284	.	+	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_3;gene_id=HG00140_ch_G0000168;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG00140_ch_G0000168;Name=FAM197Y5
HG00140_chrY	CAT	transcript	6655292	6657284	1000	+	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000601;gene_id=HG00140_ch_G0000168;Parent=HG00140_ch_G0000168;transcript_name=HG00140_ch_T0000601;gene_name=FAM197Y5;ID=HG00140_ch_T0000601;Name=FAM197Y5
HG00140_chrY	CAT	exon	6655292	6655602	.	+	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000601;gene_id=HG00140_ch_G0000168;Parent=HG00140_ch_T0000601;transcript_name=HG00140_ch_T0000601;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000601:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6655603	6657138	.	+	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000601;gene_id=HG00140_ch_G0000168;Parent=HG00140_ch_T0000601;transcript_name=HG00140_ch_T0000601;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000601:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6657139	6657284	.	+	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000601;gene_id=HG00140_ch_G0000168;Parent=HG00140_ch_T0000601;transcript_name=HG00140_ch_T0000601;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000601:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6656939	6662674	.	+	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1_5;gene_id=HG00140_ch_G0000169;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG00140_ch_G0000169;Name=FAM197Y5
HG00140_chrY	CAT	transcript	6656939	6662674	1000	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000602;gene_id=HG00140_ch_G0000169;Parent=HG00140_ch_G0000169;transcript_name=HG00140_ch_T0000602;gene_name=FAM197Y5;ID=HG00140_ch_T0000602;Name=FAM197Y5
HG00140_chrY	CAT	exon	6656939	6657052	.	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000602;gene_id=HG00140_ch_G0000169;Parent=HG00140_ch_T0000602;transcript_name=HG00140_ch_T0000602;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000602:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6657053	6658849	.	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000602;gene_id=HG00140_ch_G0000169;Parent=HG00140_ch_T0000602;transcript_name=HG00140_ch_T0000602;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000602:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6658850	6658935	.	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000602;gene_id=HG00140_ch_G0000169;Parent=HG00140_ch_T0000602;transcript_name=HG00140_ch_T0000602;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000602:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6658936	6662484	.	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000602;gene_id=HG00140_ch_G0000169;Parent=HG00140_ch_T0000602;transcript_name=HG00140_ch_T0000602;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000602:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6662485	6662674	.	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000602;gene_id=HG00140_ch_G0000169;Parent=HG00140_ch_T0000602;transcript_name=HG00140_ch_T0000602;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000602:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6656951	6662544	1000	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000603;gene_id=HG00140_ch_G0000169;Parent=HG00140_ch_G0000169;transcript_name=HG00140_ch_T0000603;gene_name=FAM197Y5;ID=HG00140_ch_T0000603;Name=FAM197Y5
HG00140_chrY	CAT	exon	6656951	6657052	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000603;gene_id=HG00140_ch_G0000169;Parent=HG00140_ch_T0000603;transcript_name=HG00140_ch_T0000603;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000603:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6657053	6657138	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000603;gene_id=HG00140_ch_G0000169;Parent=HG00140_ch_T0000603;transcript_name=HG00140_ch_T0000603;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000603:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6657139	6657284	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000603;gene_id=HG00140_ch_G0000169;Parent=HG00140_ch_T0000603;transcript_name=HG00140_ch_T0000603;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000603:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6657285	6658776	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000603;gene_id=HG00140_ch_G0000169;Parent=HG00140_ch_T0000603;transcript_name=HG00140_ch_T0000603;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000603:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6658777	6658935	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000603;gene_id=HG00140_ch_G0000169;Parent=HG00140_ch_T0000603;transcript_name=HG00140_ch_T0000603;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000603:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6658936	6662484	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000603;gene_id=HG00140_ch_G0000169;Parent=HG00140_ch_T0000603;transcript_name=HG00140_ch_T0000603;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000603:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6662485	6662544	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1_5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1_5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000603;gene_id=HG00140_ch_G0000169;Parent=HG00140_ch_T0000603;transcript_name=HG00140_ch_T0000603;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000603:3;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6671795	6674597	.	-	.	source_gene_common_name=TSPY10;source_gene=ENSG00000236424.7;gene_id=HG00140_ch_G0000170;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG00140_ch_G0000170;Name=TSPY10
HG00140_chrY	CAT	transcript	6671795	6674551	1000	-	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000604;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_G0000170;transcript_name=HG00140_ch_T0000604;gene_name=TSPY10;ID=HG00140_ch_T0000604;Name=TSPY10
HG00140_chrY	CAT	exon	6671795	6672578	.	-	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000604;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_T0000604;transcript_name=HG00140_ch_T0000604;gene_name=TSPY10;ID=exon:HG00140_ch_T0000604:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6672579	6672705	.	-	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000604;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_T0000604;transcript_name=HG00140_ch_T0000604;gene_name=TSPY10;ID=intron:HG00140_ch_T0000604:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6672706	6673252	.	-	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000604;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_T0000604;transcript_name=HG00140_ch_T0000604;gene_name=TSPY10;ID=exon:HG00140_ch_T0000604:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6673253	6673380	.	-	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000604;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_T0000604;transcript_name=HG00140_ch_T0000604;gene_name=TSPY10;ID=intron:HG00140_ch_T0000604:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6673381	6673458	.	-	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000604;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_T0000604;transcript_name=HG00140_ch_T0000604;gene_name=TSPY10;ID=exon:HG00140_ch_T0000604:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6673459	6674065	.	-	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000604;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_T0000604;transcript_name=HG00140_ch_T0000604;gene_name=TSPY10;ID=intron:HG00140_ch_T0000604:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6674066	6674551	.	-	.	source_transcript=ENST00000489397.1;source_transcript_name=TSPY10-203;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000489397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000489397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000604;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_T0000604;transcript_name=HG00140_ch_T0000604;gene_name=TSPY10;ID=exon:HG00140_ch_T0000604:3;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6671801	6674597	100	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000605;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_G0000170;transcript_name=HG00140_ch_T0000605;gene_name=TSPY10;ID=HG00140_ch_T0000605;Name=TSPY10
HG00140_chrY	CAT	exon	6671801	6672011	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000605;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_T0000605;transcript_name=HG00140_ch_T0000605;gene_name=TSPY10;ID=exon:HG00140_ch_T0000605:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6671989	6672011	.	-	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000605;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_T0000605;transcript_name=HG00140_ch_T0000605;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000605:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6671989	6671991	.	-	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000605;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_T0000605;transcript_name=HG00140_ch_T0000605;gene_name=TSPY10;ID=stop_codon:HG00140_ch_T0000605;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6672012	6672705	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000605;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_T0000605;transcript_name=HG00140_ch_T0000605;gene_name=TSPY10;ID=intron:HG00140_ch_T0000605:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6672706	6672787	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000605;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_T0000605;transcript_name=HG00140_ch_T0000605;gene_name=TSPY10;ID=exon:HG00140_ch_T0000605:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6672706	6672787	.	-	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000605;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_T0000605;transcript_name=HG00140_ch_T0000605;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000605:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6672788	6672893	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000605;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_T0000605;transcript_name=HG00140_ch_T0000605;gene_name=TSPY10;ID=intron:HG00140_ch_T0000605:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6672894	6673039	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000605;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_T0000605;transcript_name=HG00140_ch_T0000605;gene_name=TSPY10;ID=exon:HG00140_ch_T0000605:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6672894	6673039	.	-	2	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000605;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_T0000605;transcript_name=HG00140_ch_T0000605;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000605:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6673040	6673140	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000605;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_T0000605;transcript_name=HG00140_ch_T0000605;gene_name=TSPY10;ID=intron:HG00140_ch_T0000605:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6673141	6673252	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000605;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_T0000605;transcript_name=HG00140_ch_T0000605;gene_name=TSPY10;ID=exon:HG00140_ch_T0000605:3;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6673141	6673252	.	-	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000605;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_T0000605;transcript_name=HG00140_ch_T0000605;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000605:3;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6673253	6673380	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000605;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_T0000605;transcript_name=HG00140_ch_T0000605;gene_name=TSPY10;ID=intron:HG00140_ch_T0000605:3;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6673381	6673458	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000605;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_T0000605;transcript_name=HG00140_ch_T0000605;gene_name=TSPY10;ID=exon:HG00140_ch_T0000605:4;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6673381	6673458	.	-	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000605;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_T0000605;transcript_name=HG00140_ch_T0000605;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000605:4;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6673459	6674065	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000605;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_T0000605;transcript_name=HG00140_ch_T0000605;gene_name=TSPY10;ID=intron:HG00140_ch_T0000605:4;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6674066	6674597	.	-	.	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000605;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_T0000605;transcript_name=HG00140_ch_T0000605;gene_name=TSPY10;ID=exon:HG00140_ch_T0000605:5;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6674066	6674551	.	-	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000605;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_T0000605;transcript_name=HG00140_ch_T0000605;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000605:5;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6674549	6674551	.	-	0	source_transcript=ENST00000428845.6;source_transcript_name=TSPY10-201;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000428845.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000428845.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000605;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_T0000605;transcript_name=HG00140_ch_T0000605;gene_name=TSPY10;ID=start_codon:HG00140_ch_T0000605;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6671802	6674551	100	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000606;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_G0000170;transcript_name=HG00140_ch_T0000606;gene_name=TSPY10;ID=HG00140_ch_T0000606;Name=TSPY10
HG00140_chrY	CAT	exon	6671802	6672011	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000606;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_T0000606;transcript_name=HG00140_ch_T0000606;gene_name=TSPY10;ID=exon:HG00140_ch_T0000606:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6672012	6672705	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000606;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_T0000606;transcript_name=HG00140_ch_T0000606;gene_name=TSPY10;ID=intron:HG00140_ch_T0000606:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6672706	6672798	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000606;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_T0000606;transcript_name=HG00140_ch_T0000606;gene_name=TSPY10;ID=exon:HG00140_ch_T0000606:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6672736	6672798	.	-	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000606;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_T0000606;transcript_name=HG00140_ch_T0000606;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000606:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6672736	6672738	.	-	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000606;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_T0000606;transcript_name=HG00140_ch_T0000606;gene_name=TSPY10;ID=stop_codon:HG00140_ch_T0000606;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6672799	6672893	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000606;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_T0000606;transcript_name=HG00140_ch_T0000606;gene_name=TSPY10;ID=intron:HG00140_ch_T0000606:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6672894	6673039	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000606;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_T0000606;transcript_name=HG00140_ch_T0000606;gene_name=TSPY10;ID=exon:HG00140_ch_T0000606:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6672894	6673039	.	-	2	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000606;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_T0000606;transcript_name=HG00140_ch_T0000606;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000606:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6673040	6673140	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000606;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_T0000606;transcript_name=HG00140_ch_T0000606;gene_name=TSPY10;ID=intron:HG00140_ch_T0000606:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6673141	6673252	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000606;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_T0000606;transcript_name=HG00140_ch_T0000606;gene_name=TSPY10;ID=exon:HG00140_ch_T0000606:3;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6673141	6673252	.	-	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000606;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_T0000606;transcript_name=HG00140_ch_T0000606;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000606:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6673253	6673380	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000606;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_T0000606;transcript_name=HG00140_ch_T0000606;gene_name=TSPY10;ID=intron:HG00140_ch_T0000606:3;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6673381	6673458	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000606;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_T0000606;transcript_name=HG00140_ch_T0000606;gene_name=TSPY10;ID=exon:HG00140_ch_T0000606:4;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6673381	6673458	.	-	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000606;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_T0000606;transcript_name=HG00140_ch_T0000606;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000606:3;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6673459	6674065	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000606;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_T0000606;transcript_name=HG00140_ch_T0000606;gene_name=TSPY10;ID=intron:HG00140_ch_T0000606:4;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6674066	6674551	.	-	.	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000606;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_T0000606;transcript_name=HG00140_ch_T0000606;gene_name=TSPY10;ID=exon:HG00140_ch_T0000606:5;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6674066	6674551	.	-	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000606;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_T0000606;transcript_name=HG00140_ch_T0000606;gene_name=TSPY10;ID=CDS:HG00140_ch_T0000606:4;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6674549	6674551	.	-	0	source_transcript=ENST00000444056.1;source_transcript_name=TSPY10-202;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000444056.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444056.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000606;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_T0000606;transcript_name=HG00140_ch_T0000606;gene_name=TSPY10;ID=start_codon:HG00140_ch_T0000606;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6671810	6673191	1000	-	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000607;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_G0000170;transcript_name=HG00140_ch_T0000607;gene_name=TSPY10;ID=HG00140_ch_T0000607;Name=TSPY10
HG00140_chrY	CAT	exon	6671810	6672011	.	-	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000607;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_T0000607;transcript_name=HG00140_ch_T0000607;gene_name=TSPY10;ID=exon:HG00140_ch_T0000607:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6672012	6672705	.	-	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000607;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_T0000607;transcript_name=HG00140_ch_T0000607;gene_name=TSPY10;ID=intron:HG00140_ch_T0000607:0;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6672706	6672787	.	-	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000607;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_T0000607;transcript_name=HG00140_ch_T0000607;gene_name=TSPY10;ID=exon:HG00140_ch_T0000607:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6672788	6672893	.	-	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000607;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_T0000607;transcript_name=HG00140_ch_T0000607;gene_name=TSPY10;ID=intron:HG00140_ch_T0000607:1;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6672894	6673191	.	-	.	source_transcript=ENST00000495839.1;source_transcript_name=TSPY10-204;source_gene=ENSG00000236424.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000236424.7;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;transcript_id=HG00140_ch_T0000607;gene_id=HG00140_ch_G0000170;Parent=HG00140_ch_T0000607;transcript_name=HG00140_ch_T0000607;gene_name=TSPY10;ID=exon:HG00140_ch_T0000607:2;Name=TSPY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6675550	6677543	.	+	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000234830.9_6;gene_id=HG00140_ch_G0000171;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG00140_ch_G0000171;Name=FAM197Y9
HG00140_chrY	CAT	transcript	6675550	6677543	1000	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000608;gene_id=HG00140_ch_G0000171;Parent=HG00140_ch_G0000171;transcript_name=HG00140_ch_T0000608;gene_name=FAM197Y9;ID=HG00140_ch_T0000608;Name=FAM197Y9
HG00140_chrY	CAT	exon	6675550	6675859	.	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000608;gene_id=HG00140_ch_G0000171;Parent=HG00140_ch_T0000608;transcript_name=HG00140_ch_T0000608;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000608:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6675860	6677201	.	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000608;gene_id=HG00140_ch_G0000171;Parent=HG00140_ch_T0000608;transcript_name=HG00140_ch_T0000608;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000608:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6677202	6677285	.	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000608;gene_id=HG00140_ch_G0000171;Parent=HG00140_ch_T0000608;transcript_name=HG00140_ch_T0000608;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000608:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6677286	6677397	.	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000608;gene_id=HG00140_ch_G0000171;Parent=HG00140_ch_T0000608;transcript_name=HG00140_ch_T0000608;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000608:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6677398	6677543	.	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000608;gene_id=HG00140_ch_G0000171;Parent=HG00140_ch_T0000608;transcript_name=HG00140_ch_T0000608;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000608:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6677192	6684882	.	+	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000290448.1_4;gene_id=HG00140_ch_G0000172;gene_biotype=lncRNA;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG00140_ch_G0000172;Name=FAM197Y9
HG00140_chrY	CAT	transcript	6677192	6684882	1000	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000609;gene_id=HG00140_ch_G0000172;Parent=HG00140_ch_G0000172;transcript_name=HG00140_ch_T0000609;gene_name=FAM197Y9;ID=HG00140_ch_T0000609;Name=FAM197Y9
HG00140_chrY	CAT	exon	6677192	6677311	.	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000609;gene_id=HG00140_ch_G0000172;Parent=HG00140_ch_T0000609;transcript_name=HG00140_ch_T0000609;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000609:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6677312	6679118	.	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000609;gene_id=HG00140_ch_G0000172;Parent=HG00140_ch_T0000609;transcript_name=HG00140_ch_T0000609;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000609:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6679119	6679204	.	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000609;gene_id=HG00140_ch_G0000172;Parent=HG00140_ch_T0000609;transcript_name=HG00140_ch_T0000609;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000609:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6679205	6682754	.	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000609;gene_id=HG00140_ch_G0000172;Parent=HG00140_ch_T0000609;transcript_name=HG00140_ch_T0000609;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000609:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6682755	6684882	.	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000609;gene_id=HG00140_ch_G0000172;Parent=HG00140_ch_T0000609;transcript_name=HG00140_ch_T0000609;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000609:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6677210	6682814	1000	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000610;gene_id=HG00140_ch_G0000172;Parent=HG00140_ch_G0000172;transcript_name=HG00140_ch_T0000610;gene_name=FAM197Y9;ID=HG00140_ch_T0000610;Name=FAM197Y9
HG00140_chrY	CAT	exon	6677210	6677311	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000610;gene_id=HG00140_ch_G0000172;Parent=HG00140_ch_T0000610;transcript_name=HG00140_ch_T0000610;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000610:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6677312	6677397	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000610;gene_id=HG00140_ch_G0000172;Parent=HG00140_ch_T0000610;transcript_name=HG00140_ch_T0000610;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000610:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6677398	6677543	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000610;gene_id=HG00140_ch_G0000172;Parent=HG00140_ch_T0000610;transcript_name=HG00140_ch_T0000610;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000610:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6677544	6679045	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000610;gene_id=HG00140_ch_G0000172;Parent=HG00140_ch_T0000610;transcript_name=HG00140_ch_T0000610;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000610:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6679046	6679204	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000610;gene_id=HG00140_ch_G0000172;Parent=HG00140_ch_T0000610;transcript_name=HG00140_ch_T0000610;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000610:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6679205	6682754	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000610;gene_id=HG00140_ch_G0000172;Parent=HG00140_ch_T0000610;transcript_name=HG00140_ch_T0000610;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000610:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6682755	6682814	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000610;gene_id=HG00140_ch_G0000172;Parent=HG00140_ch_T0000610;transcript_name=HG00140_ch_T0000610;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000610:3;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6692082	6694838	.	-	.	source_gene_common_name=TSPY3;source_gene=ENSG00000228927.10;gene_id=HG00140_ch_G0000173;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff;ID=HG00140_ch_G0000173;Name=TSPY3
HG00140_chrY	CAT	transcript	6692082	6694838	1000	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000611;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_G0000173;transcript_name=HG00140_ch_T0000611;gene_name=TSPY3;ID=HG00140_ch_T0000611;Name=TSPY3
HG00140_chrY	CAT	exon	6692082	6692865	.	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000611;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000611;transcript_name=HG00140_ch_T0000611;gene_name=TSPY3;ID=exon:HG00140_ch_T0000611:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6692866	6692992	.	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000611;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000611;transcript_name=HG00140_ch_T0000611;gene_name=TSPY3;ID=intron:HG00140_ch_T0000611:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6692993	6693539	.	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000611;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000611;transcript_name=HG00140_ch_T0000611;gene_name=TSPY3;ID=exon:HG00140_ch_T0000611:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6693540	6693667	.	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000611;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000611;transcript_name=HG00140_ch_T0000611;gene_name=TSPY3;ID=intron:HG00140_ch_T0000611:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6693668	6693745	.	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000611;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000611;transcript_name=HG00140_ch_T0000611;gene_name=TSPY3;ID=exon:HG00140_ch_T0000611:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6693746	6694352	.	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000611;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000611;transcript_name=HG00140_ch_T0000611;gene_name=TSPY3;ID=intron:HG00140_ch_T0000611:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6694353	6694838	.	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000611;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000611;transcript_name=HG00140_ch_T0000611;gene_name=TSPY3;ID=exon:HG00140_ch_T0000611:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6692088	6694884	100	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000612;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_G0000173;transcript_name=HG00140_ch_T0000612;gene_name=TSPY3;ID=HG00140_ch_T0000612;Name=TSPY3
HG00140_chrY	CAT	exon	6692088	6692298	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000612;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000612;transcript_name=HG00140_ch_T0000612;gene_name=TSPY3;ID=exon:HG00140_ch_T0000612:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6692276	6692298	.	-	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000612;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000612;transcript_name=HG00140_ch_T0000612;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000612:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6692276	6692278	.	-	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000612;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000612;transcript_name=HG00140_ch_T0000612;gene_name=TSPY3;ID=stop_codon:HG00140_ch_T0000612;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6692299	6692992	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000612;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000612;transcript_name=HG00140_ch_T0000612;gene_name=TSPY3;ID=intron:HG00140_ch_T0000612:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6692993	6693074	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000612;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000612;transcript_name=HG00140_ch_T0000612;gene_name=TSPY3;ID=exon:HG00140_ch_T0000612:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6692993	6693074	.	-	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000612;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000612;transcript_name=HG00140_ch_T0000612;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000612:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6693075	6693180	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000612;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000612;transcript_name=HG00140_ch_T0000612;gene_name=TSPY3;ID=intron:HG00140_ch_T0000612:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6693181	6693326	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000612;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000612;transcript_name=HG00140_ch_T0000612;gene_name=TSPY3;ID=exon:HG00140_ch_T0000612:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6693181	6693326	.	-	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000612;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000612;transcript_name=HG00140_ch_T0000612;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000612:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6693327	6693427	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000612;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000612;transcript_name=HG00140_ch_T0000612;gene_name=TSPY3;ID=intron:HG00140_ch_T0000612:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6693428	6693539	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000612;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000612;transcript_name=HG00140_ch_T0000612;gene_name=TSPY3;ID=exon:HG00140_ch_T0000612:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6693428	6693539	.	-	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000612;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000612;transcript_name=HG00140_ch_T0000612;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000612:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6693540	6693667	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000612;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000612;transcript_name=HG00140_ch_T0000612;gene_name=TSPY3;ID=intron:HG00140_ch_T0000612:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6693668	6693745	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000612;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000612;transcript_name=HG00140_ch_T0000612;gene_name=TSPY3;ID=exon:HG00140_ch_T0000612:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6693668	6693745	.	-	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000612;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000612;transcript_name=HG00140_ch_T0000612;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000612:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6693746	6694352	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000612;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000612;transcript_name=HG00140_ch_T0000612;gene_name=TSPY3;ID=intron:HG00140_ch_T0000612:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6694353	6694884	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000612;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000612;transcript_name=HG00140_ch_T0000612;gene_name=TSPY3;ID=exon:HG00140_ch_T0000612:5;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6694353	6694838	.	-	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000612;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000612;transcript_name=HG00140_ch_T0000612;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000612:5;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6694836	6694838	.	-	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000612;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000612;transcript_name=HG00140_ch_T0000612;gene_name=TSPY3;ID=start_codon:HG00140_ch_T0000612;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6692089	6694838	100	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000613;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_G0000173;transcript_name=HG00140_ch_T0000613;gene_name=TSPY3;ID=HG00140_ch_T0000613;Name=TSPY3
HG00140_chrY	CAT	exon	6692089	6692298	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000613;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000613;transcript_name=HG00140_ch_T0000613;gene_name=TSPY3;ID=exon:HG00140_ch_T0000613:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6692299	6692992	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000613;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000613;transcript_name=HG00140_ch_T0000613;gene_name=TSPY3;ID=intron:HG00140_ch_T0000613:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6692993	6693085	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000613;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000613;transcript_name=HG00140_ch_T0000613;gene_name=TSPY3;ID=exon:HG00140_ch_T0000613:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6693023	6693085	.	-	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000613;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000613;transcript_name=HG00140_ch_T0000613;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000613:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6693023	6693025	.	-	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000613;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000613;transcript_name=HG00140_ch_T0000613;gene_name=TSPY3;ID=stop_codon:HG00140_ch_T0000613;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6693086	6693180	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000613;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000613;transcript_name=HG00140_ch_T0000613;gene_name=TSPY3;ID=intron:HG00140_ch_T0000613:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6693181	6693326	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000613;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000613;transcript_name=HG00140_ch_T0000613;gene_name=TSPY3;ID=exon:HG00140_ch_T0000613:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6693181	6693326	.	-	2	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000613;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000613;transcript_name=HG00140_ch_T0000613;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000613:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6693327	6693427	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000613;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000613;transcript_name=HG00140_ch_T0000613;gene_name=TSPY3;ID=intron:HG00140_ch_T0000613:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6693428	6693539	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000613;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000613;transcript_name=HG00140_ch_T0000613;gene_name=TSPY3;ID=exon:HG00140_ch_T0000613:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6693428	6693539	.	-	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000613;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000613;transcript_name=HG00140_ch_T0000613;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000613:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6693540	6693667	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000613;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000613;transcript_name=HG00140_ch_T0000613;gene_name=TSPY3;ID=intron:HG00140_ch_T0000613:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6693668	6693745	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000613;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000613;transcript_name=HG00140_ch_T0000613;gene_name=TSPY3;ID=exon:HG00140_ch_T0000613:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6693668	6693745	.	-	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000613;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000613;transcript_name=HG00140_ch_T0000613;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000613:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6693746	6694352	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000613;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000613;transcript_name=HG00140_ch_T0000613;gene_name=TSPY3;ID=intron:HG00140_ch_T0000613:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6694353	6694838	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000613;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000613;transcript_name=HG00140_ch_T0000613;gene_name=TSPY3;ID=exon:HG00140_ch_T0000613:5;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6694353	6694838	.	-	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000613;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000613;transcript_name=HG00140_ch_T0000613;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000613:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6694836	6694838	.	-	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000613;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000613;transcript_name=HG00140_ch_T0000613;gene_name=TSPY3;ID=start_codon:HG00140_ch_T0000613;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6692097	6693478	1000	-	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000614;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_G0000173;transcript_name=HG00140_ch_T0000614;gene_name=TSPY3;ID=HG00140_ch_T0000614;Name=TSPY3
HG00140_chrY	CAT	exon	6692097	6692298	.	-	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000614;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000614;transcript_name=HG00140_ch_T0000614;gene_name=TSPY3;ID=exon:HG00140_ch_T0000614:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6692299	6692992	.	-	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000614;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000614;transcript_name=HG00140_ch_T0000614;gene_name=TSPY3;ID=intron:HG00140_ch_T0000614:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6692993	6693085	.	-	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000614;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000614;transcript_name=HG00140_ch_T0000614;gene_name=TSPY3;ID=exon:HG00140_ch_T0000614:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6693086	6693180	.	-	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000614;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000614;transcript_name=HG00140_ch_T0000614;gene_name=TSPY3;ID=intron:HG00140_ch_T0000614:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6693181	6693478	.	-	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000614;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000614;transcript_name=HG00140_ch_T0000614;gene_name=TSPY3;ID=exon:HG00140_ch_T0000614:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6692276	6694838	100	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000615;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_G0000173;transcript_name=HG00140_ch_T0000615;gene_name=TSPY3;ID=HG00140_ch_T0000615;Name=TSPY3
HG00140_chrY	CAT	exon	6692276	6692298	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000615;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000615;transcript_name=HG00140_ch_T0000615;gene_name=TSPY3;ID=exon:HG00140_ch_T0000615:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6692276	6692298	.	-	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000615;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000615;transcript_name=HG00140_ch_T0000615;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000615:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6692276	6692278	.	-	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000615;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000615;transcript_name=HG00140_ch_T0000615;gene_name=TSPY3;ID=stop_codon:HG00140_ch_T0000615;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6692299	6692992	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000615;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000615;transcript_name=HG00140_ch_T0000615;gene_name=TSPY3;ID=intron:HG00140_ch_T0000615:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6692993	6693074	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000615;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000615;transcript_name=HG00140_ch_T0000615;gene_name=TSPY3;ID=exon:HG00140_ch_T0000615:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6692993	6693074	.	-	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000615;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000615;transcript_name=HG00140_ch_T0000615;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000615:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6693075	6693180	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000615;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000615;transcript_name=HG00140_ch_T0000615;gene_name=TSPY3;ID=intron:HG00140_ch_T0000615:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6693181	6693326	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000615;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000615;transcript_name=HG00140_ch_T0000615;gene_name=TSPY3;ID=exon:HG00140_ch_T0000615:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6693181	6693326	.	-	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000615;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000615;transcript_name=HG00140_ch_T0000615;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000615:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6693327	6693427	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000615;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000615;transcript_name=HG00140_ch_T0000615;gene_name=TSPY3;ID=intron:HG00140_ch_T0000615:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6693428	6693539	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000615;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000615;transcript_name=HG00140_ch_T0000615;gene_name=TSPY3;ID=exon:HG00140_ch_T0000615:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6693428	6693539	.	-	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000615;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000615;transcript_name=HG00140_ch_T0000615;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000615:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6693540	6693667	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000615;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000615;transcript_name=HG00140_ch_T0000615;gene_name=TSPY3;ID=intron:HG00140_ch_T0000615:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6693668	6693745	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000615;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000615;transcript_name=HG00140_ch_T0000615;gene_name=TSPY3;ID=exon:HG00140_ch_T0000615:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6693668	6693745	.	-	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000615;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000615;transcript_name=HG00140_ch_T0000615;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000615:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6693746	6694352	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000615;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000615;transcript_name=HG00140_ch_T0000615;gene_name=TSPY3;ID=intron:HG00140_ch_T0000615:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6694353	6694490	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000615;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000615;transcript_name=HG00140_ch_T0000615;gene_name=TSPY3;ID=exon:HG00140_ch_T0000615:5;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6694353	6694490	.	-	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000615;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000615;transcript_name=HG00140_ch_T0000615;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000615:5;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6694491	6694751	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000615;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000615;transcript_name=HG00140_ch_T0000615;gene_name=TSPY3;ID=intron:HG00140_ch_T0000615:5;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6694752	6694838	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000615;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000615;transcript_name=HG00140_ch_T0000615;gene_name=TSPY3;ID=exon:HG00140_ch_T0000615:6;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6694752	6694838	.	-	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000615;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000615;transcript_name=HG00140_ch_T0000615;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000615:6;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6694836	6694838	.	-	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;transcript_id=HG00140_ch_T0000615;gene_id=HG00140_ch_G0000173;Parent=HG00140_ch_T0000615;transcript_name=HG00140_ch_T0000615;gene_name=TSPY3;ID=start_codon:HG00140_ch_T0000615;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6695833	6697826	.	+	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000234830.9_5;gene_id=HG00140_ch_G0000174;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG00140_ch_G0000174;Name=FAM197Y9
HG00140_chrY	CAT	transcript	6695833	6697826	1000	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000616;gene_id=HG00140_ch_G0000174;Parent=HG00140_ch_G0000174;transcript_name=HG00140_ch_T0000616;gene_name=FAM197Y9;ID=HG00140_ch_T0000616;Name=FAM197Y9
HG00140_chrY	CAT	exon	6695833	6696142	.	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000616;gene_id=HG00140_ch_G0000174;Parent=HG00140_ch_T0000616;transcript_name=HG00140_ch_T0000616;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000616:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6696143	6697484	.	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000616;gene_id=HG00140_ch_G0000174;Parent=HG00140_ch_T0000616;transcript_name=HG00140_ch_T0000616;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000616:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6697485	6697568	.	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000616;gene_id=HG00140_ch_G0000174;Parent=HG00140_ch_T0000616;transcript_name=HG00140_ch_T0000616;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000616:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6697569	6697680	.	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000616;gene_id=HG00140_ch_G0000174;Parent=HG00140_ch_T0000616;transcript_name=HG00140_ch_T0000616;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000616:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6697681	6697826	.	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000616;gene_id=HG00140_ch_G0000174;Parent=HG00140_ch_T0000616;transcript_name=HG00140_ch_T0000616;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000616:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6697475	6705160	.	+	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000290448.1_3;gene_id=HG00140_ch_G0000175;gene_biotype=lncRNA;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG00140_ch_G0000175;Name=FAM197Y9
HG00140_chrY	CAT	transcript	6697475	6705160	1000	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000617;gene_id=HG00140_ch_G0000175;Parent=HG00140_ch_G0000175;transcript_name=HG00140_ch_T0000617;gene_name=FAM197Y9;ID=HG00140_ch_T0000617;Name=FAM197Y9
HG00140_chrY	CAT	exon	6697475	6697594	.	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000617;gene_id=HG00140_ch_G0000175;Parent=HG00140_ch_T0000617;transcript_name=HG00140_ch_T0000617;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000617:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6697595	6699399	.	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000617;gene_id=HG00140_ch_G0000175;Parent=HG00140_ch_T0000617;transcript_name=HG00140_ch_T0000617;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000617:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6699400	6699485	.	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000617;gene_id=HG00140_ch_G0000175;Parent=HG00140_ch_T0000617;transcript_name=HG00140_ch_T0000617;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000617:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6699486	6703033	.	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000617;gene_id=HG00140_ch_G0000175;Parent=HG00140_ch_T0000617;transcript_name=HG00140_ch_T0000617;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000617:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6703034	6705160	.	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000617;gene_id=HG00140_ch_G0000175;Parent=HG00140_ch_T0000617;transcript_name=HG00140_ch_T0000617;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000617:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6697493	6703093	1000	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000618;gene_id=HG00140_ch_G0000175;Parent=HG00140_ch_G0000175;transcript_name=HG00140_ch_T0000618;gene_name=FAM197Y9;ID=HG00140_ch_T0000618;Name=FAM197Y9
HG00140_chrY	CAT	exon	6697493	6697594	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000618;gene_id=HG00140_ch_G0000175;Parent=HG00140_ch_T0000618;transcript_name=HG00140_ch_T0000618;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000618:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6697595	6697680	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000618;gene_id=HG00140_ch_G0000175;Parent=HG00140_ch_T0000618;transcript_name=HG00140_ch_T0000618;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000618:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6697681	6697826	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000618;gene_id=HG00140_ch_G0000175;Parent=HG00140_ch_T0000618;transcript_name=HG00140_ch_T0000618;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000618:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6697827	6699326	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000618;gene_id=HG00140_ch_G0000175;Parent=HG00140_ch_T0000618;transcript_name=HG00140_ch_T0000618;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000618:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6699327	6699485	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000618;gene_id=HG00140_ch_G0000175;Parent=HG00140_ch_T0000618;transcript_name=HG00140_ch_T0000618;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000618:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6699486	6703033	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000618;gene_id=HG00140_ch_G0000175;Parent=HG00140_ch_T0000618;transcript_name=HG00140_ch_T0000618;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000618:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6703034	6703093	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000618;gene_id=HG00140_ch_G0000175;Parent=HG00140_ch_T0000618;transcript_name=HG00140_ch_T0000618;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000618:3;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6712358	6715114	.	-	.	source_gene_common_name=TSPY3;source_gene=ENSG00000228927.10;alternative_source_transcripts=ENST00000491844.1;gene_id=HG00140_ch_G0000176;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff;ID=HG00140_ch_G0000176;Name=TSPY3
HG00140_chrY	CAT	transcript	6712358	6715114	1000	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=HG00140_ch_T0000619;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_G0000176;transcript_name=HG00140_ch_T0000619;gene_name=TSPY3;ID=HG00140_ch_T0000619;Name=TSPY3
HG00140_chrY	CAT	exon	6712358	6713141	.	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=HG00140_ch_T0000619;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000619;transcript_name=HG00140_ch_T0000619;gene_name=TSPY3;ID=exon:HG00140_ch_T0000619:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6713142	6713268	.	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=HG00140_ch_T0000619;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000619;transcript_name=HG00140_ch_T0000619;gene_name=TSPY3;ID=intron:HG00140_ch_T0000619:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6713269	6713815	.	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=HG00140_ch_T0000619;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000619;transcript_name=HG00140_ch_T0000619;gene_name=TSPY3;ID=exon:HG00140_ch_T0000619:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6713816	6713943	.	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=HG00140_ch_T0000619;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000619;transcript_name=HG00140_ch_T0000619;gene_name=TSPY3;ID=intron:HG00140_ch_T0000619:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6713944	6714021	.	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=HG00140_ch_T0000619;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000619;transcript_name=HG00140_ch_T0000619;gene_name=TSPY3;ID=exon:HG00140_ch_T0000619:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6714022	6714628	.	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=HG00140_ch_T0000619;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000619;transcript_name=HG00140_ch_T0000619;gene_name=TSPY3;ID=intron:HG00140_ch_T0000619:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6714629	6715114	.	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=HG00140_ch_T0000619;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000619;transcript_name=HG00140_ch_T0000619;gene_name=TSPY3;ID=exon:HG00140_ch_T0000619:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6712364	6715160	100	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00140_ch_T0000620;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_G0000176;transcript_name=HG00140_ch_T0000620;gene_name=TSPY3;ID=HG00140_ch_T0000620;Name=TSPY3
HG00140_chrY	CAT	exon	6712364	6712574	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00140_ch_T0000620;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000620;transcript_name=HG00140_ch_T0000620;gene_name=TSPY3;ID=exon:HG00140_ch_T0000620:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6712552	6712574	.	-	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00140_ch_T0000620;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000620;transcript_name=HG00140_ch_T0000620;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000620:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6712552	6712554	.	-	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00140_ch_T0000620;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000620;transcript_name=HG00140_ch_T0000620;gene_name=TSPY3;ID=stop_codon:HG00140_ch_T0000620;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6712575	6713268	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00140_ch_T0000620;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000620;transcript_name=HG00140_ch_T0000620;gene_name=TSPY3;ID=intron:HG00140_ch_T0000620:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6713269	6713350	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00140_ch_T0000620;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000620;transcript_name=HG00140_ch_T0000620;gene_name=TSPY3;ID=exon:HG00140_ch_T0000620:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6713269	6713350	.	-	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00140_ch_T0000620;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000620;transcript_name=HG00140_ch_T0000620;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000620:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6713351	6713456	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00140_ch_T0000620;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000620;transcript_name=HG00140_ch_T0000620;gene_name=TSPY3;ID=intron:HG00140_ch_T0000620:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6713457	6713602	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00140_ch_T0000620;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000620;transcript_name=HG00140_ch_T0000620;gene_name=TSPY3;ID=exon:HG00140_ch_T0000620:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6713457	6713602	.	-	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00140_ch_T0000620;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000620;transcript_name=HG00140_ch_T0000620;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000620:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6713603	6713703	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00140_ch_T0000620;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000620;transcript_name=HG00140_ch_T0000620;gene_name=TSPY3;ID=intron:HG00140_ch_T0000620:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6713704	6713815	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00140_ch_T0000620;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000620;transcript_name=HG00140_ch_T0000620;gene_name=TSPY3;ID=exon:HG00140_ch_T0000620:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6713704	6713815	.	-	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00140_ch_T0000620;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000620;transcript_name=HG00140_ch_T0000620;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000620:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6713816	6713943	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00140_ch_T0000620;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000620;transcript_name=HG00140_ch_T0000620;gene_name=TSPY3;ID=intron:HG00140_ch_T0000620:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6713944	6714021	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00140_ch_T0000620;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000620;transcript_name=HG00140_ch_T0000620;gene_name=TSPY3;ID=exon:HG00140_ch_T0000620:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6713944	6714021	.	-	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00140_ch_T0000620;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000620;transcript_name=HG00140_ch_T0000620;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000620:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6714022	6714628	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00140_ch_T0000620;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000620;transcript_name=HG00140_ch_T0000620;gene_name=TSPY3;ID=intron:HG00140_ch_T0000620:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6714629	6715160	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00140_ch_T0000620;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000620;transcript_name=HG00140_ch_T0000620;gene_name=TSPY3;ID=exon:HG00140_ch_T0000620:5;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6714629	6715114	.	-	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00140_ch_T0000620;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000620;transcript_name=HG00140_ch_T0000620;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000620:5;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6715112	6715114	.	-	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00140_ch_T0000620;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000620;transcript_name=HG00140_ch_T0000620;gene_name=TSPY3;ID=start_codon:HG00140_ch_T0000620;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6712365	6715114	100	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00140_ch_T0000621;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_G0000176;transcript_name=HG00140_ch_T0000621;gene_name=TSPY3;ID=HG00140_ch_T0000621;Name=TSPY3
HG00140_chrY	CAT	exon	6712365	6712574	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00140_ch_T0000621;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000621;transcript_name=HG00140_ch_T0000621;gene_name=TSPY3;ID=exon:HG00140_ch_T0000621:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6712575	6713268	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00140_ch_T0000621;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000621;transcript_name=HG00140_ch_T0000621;gene_name=TSPY3;ID=intron:HG00140_ch_T0000621:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6713269	6713361	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00140_ch_T0000621;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000621;transcript_name=HG00140_ch_T0000621;gene_name=TSPY3;ID=exon:HG00140_ch_T0000621:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6713299	6713361	.	-	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00140_ch_T0000621;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000621;transcript_name=HG00140_ch_T0000621;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000621:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6713299	6713301	.	-	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00140_ch_T0000621;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000621;transcript_name=HG00140_ch_T0000621;gene_name=TSPY3;ID=stop_codon:HG00140_ch_T0000621;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6713362	6713456	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00140_ch_T0000621;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000621;transcript_name=HG00140_ch_T0000621;gene_name=TSPY3;ID=intron:HG00140_ch_T0000621:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6713457	6713602	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00140_ch_T0000621;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000621;transcript_name=HG00140_ch_T0000621;gene_name=TSPY3;ID=exon:HG00140_ch_T0000621:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6713457	6713602	.	-	2	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00140_ch_T0000621;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000621;transcript_name=HG00140_ch_T0000621;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000621:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6713603	6713703	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00140_ch_T0000621;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000621;transcript_name=HG00140_ch_T0000621;gene_name=TSPY3;ID=intron:HG00140_ch_T0000621:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6713704	6713815	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00140_ch_T0000621;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000621;transcript_name=HG00140_ch_T0000621;gene_name=TSPY3;ID=exon:HG00140_ch_T0000621:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6713704	6713815	.	-	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00140_ch_T0000621;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000621;transcript_name=HG00140_ch_T0000621;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000621:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6713816	6713943	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00140_ch_T0000621;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000621;transcript_name=HG00140_ch_T0000621;gene_name=TSPY3;ID=intron:HG00140_ch_T0000621:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6713944	6714021	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00140_ch_T0000621;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000621;transcript_name=HG00140_ch_T0000621;gene_name=TSPY3;ID=exon:HG00140_ch_T0000621:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6713944	6714021	.	-	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00140_ch_T0000621;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000621;transcript_name=HG00140_ch_T0000621;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000621:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6714022	6714628	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00140_ch_T0000621;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000621;transcript_name=HG00140_ch_T0000621;gene_name=TSPY3;ID=intron:HG00140_ch_T0000621:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6714629	6715114	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00140_ch_T0000621;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000621;transcript_name=HG00140_ch_T0000621;gene_name=TSPY3;ID=exon:HG00140_ch_T0000621:5;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6714629	6715114	.	-	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00140_ch_T0000621;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000621;transcript_name=HG00140_ch_T0000621;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000621:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6715112	6715114	.	-	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00140_ch_T0000621;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000621;transcript_name=HG00140_ch_T0000621;gene_name=TSPY3;ID=start_codon:HG00140_ch_T0000621;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6712373	6713754	1000	-	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000469322.1;transcript_id=HG00140_ch_T0000622;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_G0000176;transcript_name=HG00140_ch_T0000622;gene_name=TSPY3;ID=HG00140_ch_T0000622;Name=TSPY3
HG00140_chrY	CAT	exon	6712373	6712574	.	-	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000469322.1;transcript_id=HG00140_ch_T0000622;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000622;transcript_name=HG00140_ch_T0000622;gene_name=TSPY3;ID=exon:HG00140_ch_T0000622:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6712575	6713268	.	-	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000469322.1;transcript_id=HG00140_ch_T0000622;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000622;transcript_name=HG00140_ch_T0000622;gene_name=TSPY3;ID=intron:HG00140_ch_T0000622:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6713269	6713361	.	-	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000469322.1;transcript_id=HG00140_ch_T0000622;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000622;transcript_name=HG00140_ch_T0000622;gene_name=TSPY3;ID=exon:HG00140_ch_T0000622:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6713362	6713456	.	-	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000469322.1;transcript_id=HG00140_ch_T0000622;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000622;transcript_name=HG00140_ch_T0000622;gene_name=TSPY3;ID=intron:HG00140_ch_T0000622:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6713457	6713754	.	-	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000469322.1;transcript_id=HG00140_ch_T0000622;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000622;transcript_name=HG00140_ch_T0000622;gene_name=TSPY3;ID=exon:HG00140_ch_T0000622:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6712552	6715114	100	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00140_ch_T0000623;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_G0000176;transcript_name=HG00140_ch_T0000623;gene_name=TSPY3;ID=HG00140_ch_T0000623;Name=TSPY3
HG00140_chrY	CAT	exon	6712552	6712574	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00140_ch_T0000623;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000623;transcript_name=HG00140_ch_T0000623;gene_name=TSPY3;ID=exon:HG00140_ch_T0000623:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6712552	6712574	.	-	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00140_ch_T0000623;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000623;transcript_name=HG00140_ch_T0000623;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000623:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6712552	6712554	.	-	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00140_ch_T0000623;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000623;transcript_name=HG00140_ch_T0000623;gene_name=TSPY3;ID=stop_codon:HG00140_ch_T0000623;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6712575	6713268	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00140_ch_T0000623;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000623;transcript_name=HG00140_ch_T0000623;gene_name=TSPY3;ID=intron:HG00140_ch_T0000623:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6713269	6713350	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00140_ch_T0000623;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000623;transcript_name=HG00140_ch_T0000623;gene_name=TSPY3;ID=exon:HG00140_ch_T0000623:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6713269	6713350	.	-	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00140_ch_T0000623;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000623;transcript_name=HG00140_ch_T0000623;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000623:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6713351	6713456	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00140_ch_T0000623;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000623;transcript_name=HG00140_ch_T0000623;gene_name=TSPY3;ID=intron:HG00140_ch_T0000623:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6713457	6713602	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00140_ch_T0000623;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000623;transcript_name=HG00140_ch_T0000623;gene_name=TSPY3;ID=exon:HG00140_ch_T0000623:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6713457	6713602	.	-	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00140_ch_T0000623;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000623;transcript_name=HG00140_ch_T0000623;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000623:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6713603	6713703	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00140_ch_T0000623;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000623;transcript_name=HG00140_ch_T0000623;gene_name=TSPY3;ID=intron:HG00140_ch_T0000623:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6713704	6713815	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00140_ch_T0000623;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000623;transcript_name=HG00140_ch_T0000623;gene_name=TSPY3;ID=exon:HG00140_ch_T0000623:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6713704	6713815	.	-	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00140_ch_T0000623;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000623;transcript_name=HG00140_ch_T0000623;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000623:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6713816	6713943	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00140_ch_T0000623;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000623;transcript_name=HG00140_ch_T0000623;gene_name=TSPY3;ID=intron:HG00140_ch_T0000623:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6713944	6714021	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00140_ch_T0000623;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000623;transcript_name=HG00140_ch_T0000623;gene_name=TSPY3;ID=exon:HG00140_ch_T0000623:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6713944	6714021	.	-	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00140_ch_T0000623;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000623;transcript_name=HG00140_ch_T0000623;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000623:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6714022	6714628	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00140_ch_T0000623;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000623;transcript_name=HG00140_ch_T0000623;gene_name=TSPY3;ID=intron:HG00140_ch_T0000623:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6714629	6714766	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00140_ch_T0000623;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000623;transcript_name=HG00140_ch_T0000623;gene_name=TSPY3;ID=exon:HG00140_ch_T0000623:5;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6714629	6714766	.	-	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00140_ch_T0000623;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000623;transcript_name=HG00140_ch_T0000623;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000623:5;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6714767	6715027	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00140_ch_T0000623;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000623;transcript_name=HG00140_ch_T0000623;gene_name=TSPY3;ID=intron:HG00140_ch_T0000623:5;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6715028	6715114	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00140_ch_T0000623;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000623;transcript_name=HG00140_ch_T0000623;gene_name=TSPY3;ID=exon:HG00140_ch_T0000623:6;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6715028	6715114	.	-	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00140_ch_T0000623;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000623;transcript_name=HG00140_ch_T0000623;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000623:6;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6715112	6715114	.	-	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00140_ch_T0000623;gene_id=HG00140_ch_G0000176;Parent=HG00140_ch_T0000623;transcript_name=HG00140_ch_T0000623;gene_name=TSPY3;ID=start_codon:HG00140_ch_T0000623;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6716114	6718106	.	+	.	source_gene_common_name=ENSG00000286120;source_gene=ENSG00000286120.1_1;gene_id=HG00140_ch_G0000177;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000286120;gene_sources=liftoff;ID=HG00140_ch_G0000177;Name=ENSG00000286120
HG00140_chrY	CAT	transcript	6716114	6718106	1000	+	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=HG00140_ch_T0000624;gene_id=HG00140_ch_G0000177;Parent=HG00140_ch_G0000177;transcript_name=HG00140_ch_T0000624;gene_name=ENSG00000286120;ID=HG00140_ch_T0000624;Name=ENSG00000286120
HG00140_chrY	CAT	exon	6716114	6716424	.	+	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=HG00140_ch_T0000624;gene_id=HG00140_ch_G0000177;Parent=HG00140_ch_T0000624;transcript_name=HG00140_ch_T0000624;gene_name=ENSG00000286120;ID=exon:HG00140_ch_T0000624:0;Name=ENSG00000286120;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6716425	6717960	.	+	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=HG00140_ch_T0000624;gene_id=HG00140_ch_G0000177;Parent=HG00140_ch_T0000624;transcript_name=HG00140_ch_T0000624;gene_name=ENSG00000286120;ID=intron:HG00140_ch_T0000624:0;Name=ENSG00000286120;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6717961	6718106	.	+	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=HG00140_ch_T0000624;gene_id=HG00140_ch_G0000177;Parent=HG00140_ch_T0000624;transcript_name=HG00140_ch_T0000624;gene_name=ENSG00000286120;ID=exon:HG00140_ch_T0000624:1;Name=ENSG00000286120;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6717554	6725444	.	+	.	source_gene_common_name=FAM197Y7;source_gene=ENSG00000228383.7_2;gene_id=HG00140_ch_G0000178;gene_biotype=lncRNA;gene_name=FAM197Y7;gene_sources=liftoff;ID=HG00140_ch_G0000178;Name=FAM197Y7
HG00140_chrY	CAT	transcript	6717554	6725444	1000	+	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00140_ch_T0000625;gene_id=HG00140_ch_G0000178;Parent=HG00140_ch_G0000178;transcript_name=HG00140_ch_T0000625;gene_name=FAM197Y7;ID=HG00140_ch_T0000625;Name=FAM197Y7
HG00140_chrY	CAT	exon	6717554	6717568	.	+	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00140_ch_T0000625;gene_id=HG00140_ch_G0000178;Parent=HG00140_ch_T0000625;transcript_name=HG00140_ch_T0000625;gene_name=FAM197Y7;ID=exon:HG00140_ch_T0000625:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6717569	6717764	.	+	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00140_ch_T0000625;gene_id=HG00140_ch_G0000178;Parent=HG00140_ch_T0000625;transcript_name=HG00140_ch_T0000625;gene_name=FAM197Y7;ID=intron:HG00140_ch_T0000625:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6717765	6717874	.	+	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00140_ch_T0000625;gene_id=HG00140_ch_G0000178;Parent=HG00140_ch_T0000625;transcript_name=HG00140_ch_T0000625;gene_name=FAM197Y7;ID=exon:HG00140_ch_T0000625:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6717875	6719683	.	+	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00140_ch_T0000625;gene_id=HG00140_ch_G0000178;Parent=HG00140_ch_T0000625;transcript_name=HG00140_ch_T0000625;gene_name=FAM197Y7;ID=intron:HG00140_ch_T0000625:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6719684	6719769	.	+	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00140_ch_T0000625;gene_id=HG00140_ch_G0000178;Parent=HG00140_ch_T0000625;transcript_name=HG00140_ch_T0000625;gene_name=FAM197Y7;ID=exon:HG00140_ch_T0000625:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6719770	6723320	.	+	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00140_ch_T0000625;gene_id=HG00140_ch_G0000178;Parent=HG00140_ch_T0000625;transcript_name=HG00140_ch_T0000625;gene_name=FAM197Y7;ID=intron:HG00140_ch_T0000625:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6723321	6725444	.	+	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00140_ch_T0000625;gene_id=HG00140_ch_G0000178;Parent=HG00140_ch_T0000625;transcript_name=HG00140_ch_T0000625;gene_name=FAM197Y7;ID=exon:HG00140_ch_T0000625:3;Name=FAM197Y7;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6717773	6723380	1000	+	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00140_ch_T0000626;gene_id=HG00140_ch_G0000178;Parent=HG00140_ch_G0000178;transcript_name=HG00140_ch_T0000626;gene_name=FAM197Y7;ID=HG00140_ch_T0000626;Name=FAM197Y7
HG00140_chrY	CAT	exon	6717773	6717874	.	+	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00140_ch_T0000626;gene_id=HG00140_ch_G0000178;Parent=HG00140_ch_T0000626;transcript_name=HG00140_ch_T0000626;gene_name=FAM197Y7;ID=exon:HG00140_ch_T0000626:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6717875	6717960	.	+	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00140_ch_T0000626;gene_id=HG00140_ch_G0000178;Parent=HG00140_ch_T0000626;transcript_name=HG00140_ch_T0000626;gene_name=FAM197Y7;ID=intron:HG00140_ch_T0000626:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6717961	6718106	.	+	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00140_ch_T0000626;gene_id=HG00140_ch_G0000178;Parent=HG00140_ch_T0000626;transcript_name=HG00140_ch_T0000626;gene_name=FAM197Y7;ID=exon:HG00140_ch_T0000626:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6718107	6719610	.	+	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00140_ch_T0000626;gene_id=HG00140_ch_G0000178;Parent=HG00140_ch_T0000626;transcript_name=HG00140_ch_T0000626;gene_name=FAM197Y7;ID=intron:HG00140_ch_T0000626:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6719611	6719769	.	+	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00140_ch_T0000626;gene_id=HG00140_ch_G0000178;Parent=HG00140_ch_T0000626;transcript_name=HG00140_ch_T0000626;gene_name=FAM197Y7;ID=exon:HG00140_ch_T0000626:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6719770	6723320	.	+	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00140_ch_T0000626;gene_id=HG00140_ch_G0000178;Parent=HG00140_ch_T0000626;transcript_name=HG00140_ch_T0000626;gene_name=FAM197Y7;ID=intron:HG00140_ch_T0000626:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6723321	6723380	.	+	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7_2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7_2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00140_ch_T0000626;gene_id=HG00140_ch_G0000178;Parent=HG00140_ch_T0000626;transcript_name=HG00140_ch_T0000626;gene_name=FAM197Y7;ID=exon:HG00140_ch_T0000626:3;Name=FAM197Y7;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6732639	6735395	.	-	.	source_gene_common_name=TSPY3;source_gene=ENSG00000228927.10;alternative_source_transcripts=ENST00000491844.1;gene_id=HG00140_ch_G0000179;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff;ID=HG00140_ch_G0000179;Name=TSPY3
HG00140_chrY	CAT	transcript	6732639	6735395	1000	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=HG00140_ch_T0000627;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_G0000179;transcript_name=HG00140_ch_T0000627;gene_name=TSPY3;ID=HG00140_ch_T0000627;Name=TSPY3
HG00140_chrY	CAT	exon	6732639	6733422	.	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=HG00140_ch_T0000627;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000627;transcript_name=HG00140_ch_T0000627;gene_name=TSPY3;ID=exon:HG00140_ch_T0000627:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6733423	6733549	.	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=HG00140_ch_T0000627;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000627;transcript_name=HG00140_ch_T0000627;gene_name=TSPY3;ID=intron:HG00140_ch_T0000627:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6733550	6734096	.	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=HG00140_ch_T0000627;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000627;transcript_name=HG00140_ch_T0000627;gene_name=TSPY3;ID=exon:HG00140_ch_T0000627:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6734097	6734224	.	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=HG00140_ch_T0000627;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000627;transcript_name=HG00140_ch_T0000627;gene_name=TSPY3;ID=intron:HG00140_ch_T0000627:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6734225	6734302	.	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=HG00140_ch_T0000627;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000627;transcript_name=HG00140_ch_T0000627;gene_name=TSPY3;ID=exon:HG00140_ch_T0000627:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6734303	6734909	.	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=HG00140_ch_T0000627;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000627;transcript_name=HG00140_ch_T0000627;gene_name=TSPY3;ID=intron:HG00140_ch_T0000627:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6734910	6735395	.	-	.	source_transcript=ENST00000491844.1;source_transcript_name=TSPY3-205;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491844.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000491844.1;transcript_id=HG00140_ch_T0000627;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000627;transcript_name=HG00140_ch_T0000627;gene_name=TSPY3;ID=exon:HG00140_ch_T0000627:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6732645	6735441	100	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00140_ch_T0000628;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_G0000179;transcript_name=HG00140_ch_T0000628;gene_name=TSPY3;ID=HG00140_ch_T0000628;Name=TSPY3
HG00140_chrY	CAT	exon	6732645	6732855	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00140_ch_T0000628;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000628;transcript_name=HG00140_ch_T0000628;gene_name=TSPY3;ID=exon:HG00140_ch_T0000628:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6732833	6732855	.	-	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00140_ch_T0000628;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000628;transcript_name=HG00140_ch_T0000628;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000628:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6732833	6732835	.	-	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00140_ch_T0000628;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000628;transcript_name=HG00140_ch_T0000628;gene_name=TSPY3;ID=stop_codon:HG00140_ch_T0000628;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6732856	6733549	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00140_ch_T0000628;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000628;transcript_name=HG00140_ch_T0000628;gene_name=TSPY3;ID=intron:HG00140_ch_T0000628:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6733550	6733631	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00140_ch_T0000628;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000628;transcript_name=HG00140_ch_T0000628;gene_name=TSPY3;ID=exon:HG00140_ch_T0000628:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6733550	6733631	.	-	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00140_ch_T0000628;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000628;transcript_name=HG00140_ch_T0000628;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000628:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6733632	6733737	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00140_ch_T0000628;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000628;transcript_name=HG00140_ch_T0000628;gene_name=TSPY3;ID=intron:HG00140_ch_T0000628:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6733738	6733883	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00140_ch_T0000628;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000628;transcript_name=HG00140_ch_T0000628;gene_name=TSPY3;ID=exon:HG00140_ch_T0000628:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6733738	6733883	.	-	2	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00140_ch_T0000628;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000628;transcript_name=HG00140_ch_T0000628;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000628:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6733884	6733984	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00140_ch_T0000628;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000628;transcript_name=HG00140_ch_T0000628;gene_name=TSPY3;ID=intron:HG00140_ch_T0000628:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6733985	6734096	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00140_ch_T0000628;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000628;transcript_name=HG00140_ch_T0000628;gene_name=TSPY3;ID=exon:HG00140_ch_T0000628:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6733985	6734096	.	-	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00140_ch_T0000628;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000628;transcript_name=HG00140_ch_T0000628;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000628:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6734097	6734224	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00140_ch_T0000628;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000628;transcript_name=HG00140_ch_T0000628;gene_name=TSPY3;ID=intron:HG00140_ch_T0000628:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6734225	6734302	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00140_ch_T0000628;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000628;transcript_name=HG00140_ch_T0000628;gene_name=TSPY3;ID=exon:HG00140_ch_T0000628:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6734225	6734302	.	-	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00140_ch_T0000628;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000628;transcript_name=HG00140_ch_T0000628;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000628:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6734303	6734909	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00140_ch_T0000628;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000628;transcript_name=HG00140_ch_T0000628;gene_name=TSPY3;ID=intron:HG00140_ch_T0000628:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6734910	6735441	.	-	.	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00140_ch_T0000628;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000628;transcript_name=HG00140_ch_T0000628;gene_name=TSPY3;ID=exon:HG00140_ch_T0000628:5;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6734910	6735395	.	-	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00140_ch_T0000628;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000628;transcript_name=HG00140_ch_T0000628;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000628:5;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6735393	6735395	.	-	0	source_transcript=ENST00000457222.6;source_transcript_name=TSPY3-203;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000457222.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457222.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000457222.6;transcript_id=HG00140_ch_T0000628;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000628;transcript_name=HG00140_ch_T0000628;gene_name=TSPY3;ID=start_codon:HG00140_ch_T0000628;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6732646	6735395	100	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00140_ch_T0000629;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_G0000179;transcript_name=HG00140_ch_T0000629;gene_name=TSPY3;ID=HG00140_ch_T0000629;Name=TSPY3
HG00140_chrY	CAT	exon	6732646	6732855	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00140_ch_T0000629;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000629;transcript_name=HG00140_ch_T0000629;gene_name=TSPY3;ID=exon:HG00140_ch_T0000629:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6732856	6733549	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00140_ch_T0000629;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000629;transcript_name=HG00140_ch_T0000629;gene_name=TSPY3;ID=intron:HG00140_ch_T0000629:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6733550	6733642	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00140_ch_T0000629;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000629;transcript_name=HG00140_ch_T0000629;gene_name=TSPY3;ID=exon:HG00140_ch_T0000629:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6733580	6733642	.	-	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00140_ch_T0000629;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000629;transcript_name=HG00140_ch_T0000629;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000629:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6733580	6733582	.	-	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00140_ch_T0000629;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000629;transcript_name=HG00140_ch_T0000629;gene_name=TSPY3;ID=stop_codon:HG00140_ch_T0000629;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6733643	6733737	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00140_ch_T0000629;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000629;transcript_name=HG00140_ch_T0000629;gene_name=TSPY3;ID=intron:HG00140_ch_T0000629:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6733738	6733883	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00140_ch_T0000629;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000629;transcript_name=HG00140_ch_T0000629;gene_name=TSPY3;ID=exon:HG00140_ch_T0000629:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6733738	6733883	.	-	2	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00140_ch_T0000629;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000629;transcript_name=HG00140_ch_T0000629;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000629:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6733884	6733984	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00140_ch_T0000629;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000629;transcript_name=HG00140_ch_T0000629;gene_name=TSPY3;ID=intron:HG00140_ch_T0000629:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6733985	6734096	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00140_ch_T0000629;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000629;transcript_name=HG00140_ch_T0000629;gene_name=TSPY3;ID=exon:HG00140_ch_T0000629:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6733985	6734096	.	-	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00140_ch_T0000629;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000629;transcript_name=HG00140_ch_T0000629;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000629:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6734097	6734224	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00140_ch_T0000629;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000629;transcript_name=HG00140_ch_T0000629;gene_name=TSPY3;ID=intron:HG00140_ch_T0000629:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6734225	6734302	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00140_ch_T0000629;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000629;transcript_name=HG00140_ch_T0000629;gene_name=TSPY3;ID=exon:HG00140_ch_T0000629:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6734225	6734302	.	-	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00140_ch_T0000629;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000629;transcript_name=HG00140_ch_T0000629;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000629:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6734303	6734909	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00140_ch_T0000629;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000629;transcript_name=HG00140_ch_T0000629;gene_name=TSPY3;ID=intron:HG00140_ch_T0000629:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6734910	6735395	.	-	.	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00140_ch_T0000629;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000629;transcript_name=HG00140_ch_T0000629;gene_name=TSPY3;ID=exon:HG00140_ch_T0000629:5;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6734910	6735395	.	-	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00140_ch_T0000629;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000629;transcript_name=HG00140_ch_T0000629;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000629:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6735393	6735395	.	-	0	source_transcript=ENST00000424594.1;source_transcript_name=TSPY3-201;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000424594.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424594.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000424594.1;transcript_id=HG00140_ch_T0000629;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000629;transcript_name=HG00140_ch_T0000629;gene_name=TSPY3;ID=start_codon:HG00140_ch_T0000629;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6732654	6734035	1000	-	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000469322.1;transcript_id=HG00140_ch_T0000630;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_G0000179;transcript_name=HG00140_ch_T0000630;gene_name=TSPY3;ID=HG00140_ch_T0000630;Name=TSPY3
HG00140_chrY	CAT	exon	6732654	6732855	.	-	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000469322.1;transcript_id=HG00140_ch_T0000630;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000630;transcript_name=HG00140_ch_T0000630;gene_name=TSPY3;ID=exon:HG00140_ch_T0000630:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6732856	6733549	.	-	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000469322.1;transcript_id=HG00140_ch_T0000630;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000630;transcript_name=HG00140_ch_T0000630;gene_name=TSPY3;ID=intron:HG00140_ch_T0000630:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6733550	6733642	.	-	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000469322.1;transcript_id=HG00140_ch_T0000630;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000630;transcript_name=HG00140_ch_T0000630;gene_name=TSPY3;ID=exon:HG00140_ch_T0000630:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6733643	6733737	.	-	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000469322.1;transcript_id=HG00140_ch_T0000630;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000630;transcript_name=HG00140_ch_T0000630;gene_name=TSPY3;ID=intron:HG00140_ch_T0000630:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6733738	6734035	.	-	.	source_transcript=ENST00000469322.1;source_transcript_name=TSPY3-204;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469322.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469322.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000469322.1;transcript_id=HG00140_ch_T0000630;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000630;transcript_name=HG00140_ch_T0000630;gene_name=TSPY3;ID=exon:HG00140_ch_T0000630:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6732833	6735395	100	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00140_ch_T0000631;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_G0000179;transcript_name=HG00140_ch_T0000631;gene_name=TSPY3;ID=HG00140_ch_T0000631;Name=TSPY3
HG00140_chrY	CAT	exon	6732833	6732855	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00140_ch_T0000631;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000631;transcript_name=HG00140_ch_T0000631;gene_name=TSPY3;ID=exon:HG00140_ch_T0000631:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6732833	6732855	.	-	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00140_ch_T0000631;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000631;transcript_name=HG00140_ch_T0000631;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000631:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6732833	6732835	.	-	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00140_ch_T0000631;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000631;transcript_name=HG00140_ch_T0000631;gene_name=TSPY3;ID=stop_codon:HG00140_ch_T0000631;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6732856	6733549	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00140_ch_T0000631;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000631;transcript_name=HG00140_ch_T0000631;gene_name=TSPY3;ID=intron:HG00140_ch_T0000631:0;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6733550	6733631	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00140_ch_T0000631;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000631;transcript_name=HG00140_ch_T0000631;gene_name=TSPY3;ID=exon:HG00140_ch_T0000631:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6733550	6733631	.	-	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00140_ch_T0000631;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000631;transcript_name=HG00140_ch_T0000631;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000631:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6733632	6733737	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00140_ch_T0000631;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000631;transcript_name=HG00140_ch_T0000631;gene_name=TSPY3;ID=intron:HG00140_ch_T0000631:1;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6733738	6733883	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00140_ch_T0000631;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000631;transcript_name=HG00140_ch_T0000631;gene_name=TSPY3;ID=exon:HG00140_ch_T0000631:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6733738	6733883	.	-	2	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00140_ch_T0000631;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000631;transcript_name=HG00140_ch_T0000631;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000631:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6733884	6733984	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00140_ch_T0000631;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000631;transcript_name=HG00140_ch_T0000631;gene_name=TSPY3;ID=intron:HG00140_ch_T0000631:2;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6733985	6734096	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00140_ch_T0000631;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000631;transcript_name=HG00140_ch_T0000631;gene_name=TSPY3;ID=exon:HG00140_ch_T0000631:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6733985	6734096	.	-	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00140_ch_T0000631;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000631;transcript_name=HG00140_ch_T0000631;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000631:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6734097	6734224	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00140_ch_T0000631;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000631;transcript_name=HG00140_ch_T0000631;gene_name=TSPY3;ID=intron:HG00140_ch_T0000631:3;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6734225	6734302	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00140_ch_T0000631;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000631;transcript_name=HG00140_ch_T0000631;gene_name=TSPY3;ID=exon:HG00140_ch_T0000631:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6734225	6734302	.	-	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00140_ch_T0000631;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000631;transcript_name=HG00140_ch_T0000631;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000631:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6734303	6734909	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00140_ch_T0000631;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000631;transcript_name=HG00140_ch_T0000631;gene_name=TSPY3;ID=intron:HG00140_ch_T0000631:4;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6734910	6735047	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00140_ch_T0000631;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000631;transcript_name=HG00140_ch_T0000631;gene_name=TSPY3;ID=exon:HG00140_ch_T0000631:5;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6734910	6735047	.	-	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00140_ch_T0000631;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000631;transcript_name=HG00140_ch_T0000631;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000631:5;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6735048	6735308	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00140_ch_T0000631;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000631;transcript_name=HG00140_ch_T0000631;gene_name=TSPY3;ID=intron:HG00140_ch_T0000631:5;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6735309	6735395	.	-	.	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00140_ch_T0000631;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000631;transcript_name=HG00140_ch_T0000631;gene_name=TSPY3;ID=exon:HG00140_ch_T0000631:6;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6735309	6735395	.	-	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00140_ch_T0000631;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000631;transcript_name=HG00140_ch_T0000631;gene_name=TSPY3;ID=CDS:HG00140_ch_T0000631:6;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6735393	6735395	.	-	0	source_transcript=ENST00000440483.5;source_transcript_name=TSPY3-202;source_gene=ENSG00000228927.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000228927.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440483.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440483.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=ENST00000440483.5;transcript_id=HG00140_ch_T0000631;gene_id=HG00140_ch_G0000179;Parent=HG00140_ch_T0000631;transcript_name=HG00140_ch_T0000631;gene_name=TSPY3;ID=start_codon:HG00140_ch_T0000631;Name=TSPY3;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6736395	6738387	.	+	.	source_gene_common_name=ENSG00000286120;source_gene=ENSG00000286120.1;gene_id=HG00140_ch_G0000180;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000286120;gene_sources=liftoff;ID=HG00140_ch_G0000180;Name=ENSG00000286120
HG00140_chrY	CAT	transcript	6736395	6738387	1000	+	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=HG00140_ch_T0000632;gene_id=HG00140_ch_G0000180;Parent=HG00140_ch_G0000180;transcript_name=HG00140_ch_T0000632;gene_name=ENSG00000286120;ID=HG00140_ch_T0000632;Name=ENSG00000286120
HG00140_chrY	CAT	exon	6736395	6736705	.	+	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=HG00140_ch_T0000632;gene_id=HG00140_ch_G0000180;Parent=HG00140_ch_T0000632;transcript_name=HG00140_ch_T0000632;gene_name=ENSG00000286120;ID=exon:HG00140_ch_T0000632:0;Name=ENSG00000286120;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6736706	6738241	.	+	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=HG00140_ch_T0000632;gene_id=HG00140_ch_G0000180;Parent=HG00140_ch_T0000632;transcript_name=HG00140_ch_T0000632;gene_name=ENSG00000286120;ID=intron:HG00140_ch_T0000632:0;Name=ENSG00000286120;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6738242	6738387	.	+	.	source_transcript=ENST00000432892.3;source_transcript_name=ENST00000432892;source_gene=ENSG00000286120.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000286120.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432892.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000432892.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286120;transcript_id=HG00140_ch_T0000632;gene_id=HG00140_ch_G0000180;Parent=HG00140_ch_T0000632;transcript_name=HG00140_ch_T0000632;gene_name=ENSG00000286120;ID=exon:HG00140_ch_T0000632:1;Name=ENSG00000286120;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6737835	6745707	.	+	.	source_gene_common_name=FAM197Y7;source_gene=ENSG00000228383.7;gene_id=HG00140_ch_G0000181;gene_biotype=lncRNA;gene_name=FAM197Y7;gene_sources=liftoff;ID=HG00140_ch_G0000181;Name=FAM197Y7
HG00140_chrY	CAT	transcript	6737835	6745707	1000	+	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00140_ch_T0000633;gene_id=HG00140_ch_G0000181;Parent=HG00140_ch_G0000181;transcript_name=HG00140_ch_T0000633;gene_name=FAM197Y7;ID=HG00140_ch_T0000633;Name=FAM197Y7
HG00140_chrY	CAT	exon	6737835	6737849	.	+	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00140_ch_T0000633;gene_id=HG00140_ch_G0000181;Parent=HG00140_ch_T0000633;transcript_name=HG00140_ch_T0000633;gene_name=FAM197Y7;ID=exon:HG00140_ch_T0000633:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6737850	6738045	.	+	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00140_ch_T0000633;gene_id=HG00140_ch_G0000181;Parent=HG00140_ch_T0000633;transcript_name=HG00140_ch_T0000633;gene_name=FAM197Y7;ID=intron:HG00140_ch_T0000633:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6738046	6738155	.	+	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00140_ch_T0000633;gene_id=HG00140_ch_G0000181;Parent=HG00140_ch_T0000633;transcript_name=HG00140_ch_T0000633;gene_name=FAM197Y7;ID=exon:HG00140_ch_T0000633:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6738156	6739956	.	+	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00140_ch_T0000633;gene_id=HG00140_ch_G0000181;Parent=HG00140_ch_T0000633;transcript_name=HG00140_ch_T0000633;gene_name=FAM197Y7;ID=intron:HG00140_ch_T0000633:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6739957	6740042	.	+	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00140_ch_T0000633;gene_id=HG00140_ch_G0000181;Parent=HG00140_ch_T0000633;transcript_name=HG00140_ch_T0000633;gene_name=FAM197Y7;ID=exon:HG00140_ch_T0000633:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6740043	6743593	.	+	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00140_ch_T0000633;gene_id=HG00140_ch_G0000181;Parent=HG00140_ch_T0000633;transcript_name=HG00140_ch_T0000633;gene_name=FAM197Y7;ID=intron:HG00140_ch_T0000633:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6743594	6745707	.	+	.	source_transcript=ENST00000433321.5;source_transcript_name=FAM197Y7-201;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433321.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433321.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00140_ch_T0000633;gene_id=HG00140_ch_G0000181;Parent=HG00140_ch_T0000633;transcript_name=HG00140_ch_T0000633;gene_name=FAM197Y7;ID=exon:HG00140_ch_T0000633:3;Name=FAM197Y7;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6738054	6743653	1000	+	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00140_ch_T0000634;gene_id=HG00140_ch_G0000181;Parent=HG00140_ch_G0000181;transcript_name=HG00140_ch_T0000634;gene_name=FAM197Y7;ID=HG00140_ch_T0000634;Name=FAM197Y7
HG00140_chrY	CAT	exon	6738054	6738155	.	+	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00140_ch_T0000634;gene_id=HG00140_ch_G0000181;Parent=HG00140_ch_T0000634;transcript_name=HG00140_ch_T0000634;gene_name=FAM197Y7;ID=exon:HG00140_ch_T0000634:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6738156	6738241	.	+	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00140_ch_T0000634;gene_id=HG00140_ch_G0000181;Parent=HG00140_ch_T0000634;transcript_name=HG00140_ch_T0000634;gene_name=FAM197Y7;ID=intron:HG00140_ch_T0000634:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6738242	6738387	.	+	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00140_ch_T0000634;gene_id=HG00140_ch_G0000181;Parent=HG00140_ch_T0000634;transcript_name=HG00140_ch_T0000634;gene_name=FAM197Y7;ID=exon:HG00140_ch_T0000634:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6738388	6739883	.	+	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00140_ch_T0000634;gene_id=HG00140_ch_G0000181;Parent=HG00140_ch_T0000634;transcript_name=HG00140_ch_T0000634;gene_name=FAM197Y7;ID=intron:HG00140_ch_T0000634:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6739884	6740042	.	+	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00140_ch_T0000634;gene_id=HG00140_ch_G0000181;Parent=HG00140_ch_T0000634;transcript_name=HG00140_ch_T0000634;gene_name=FAM197Y7;ID=exon:HG00140_ch_T0000634:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6740043	6743593	.	+	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00140_ch_T0000634;gene_id=HG00140_ch_G0000181;Parent=HG00140_ch_T0000634;transcript_name=HG00140_ch_T0000634;gene_name=FAM197Y7;ID=intron:HG00140_ch_T0000634:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6743594	6743653	.	+	.	source_transcript=ENST00000436801.5;source_transcript_name=FAM197Y7-202;source_gene=ENSG00000228383.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228383.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436801.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000436801.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;transcript_id=HG00140_ch_T0000634;gene_id=HG00140_ch_G0000181;Parent=HG00140_ch_T0000634;transcript_name=HG00140_ch_T0000634;gene_name=FAM197Y7;ID=exon:HG00140_ch_T0000634:3;Name=FAM197Y7;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6752916	6755730	.	-	.	source_gene_common_name=TSPY9;source_gene=ENSG00000238074.6;gene_id=HG00140_ch_G0000182;gene_biotype=protein_coding;gene_name=TSPY9;gene_sources=liftoff;ID=HG00140_ch_G0000182;Name=TSPY9
HG00140_chrY	CAT	transcript	6752916	6755730	100	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000635;gene_id=HG00140_ch_G0000182;Parent=HG00140_ch_G0000182;transcript_name=HG00140_ch_T0000635;gene_name=TSPY9;ID=HG00140_ch_T0000635;Name=TSPY9
HG00140_chrY	CAT	exon	6752916	6753126	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000635;gene_id=HG00140_ch_G0000182;Parent=HG00140_ch_T0000635;transcript_name=HG00140_ch_T0000635;gene_name=TSPY9;ID=exon:HG00140_ch_T0000635:0;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6753104	6753126	.	-	2	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000635;gene_id=HG00140_ch_G0000182;Parent=HG00140_ch_T0000635;transcript_name=HG00140_ch_T0000635;gene_name=TSPY9;ID=CDS:HG00140_ch_T0000635:0;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6753104	6753106	.	-	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000635;gene_id=HG00140_ch_G0000182;Parent=HG00140_ch_T0000635;transcript_name=HG00140_ch_T0000635;gene_name=TSPY9;ID=stop_codon:HG00140_ch_T0000635;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6753127	6753820	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000635;gene_id=HG00140_ch_G0000182;Parent=HG00140_ch_T0000635;transcript_name=HG00140_ch_T0000635;gene_name=TSPY9;ID=intron:HG00140_ch_T0000635:0;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6753821	6753902	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000635;gene_id=HG00140_ch_G0000182;Parent=HG00140_ch_T0000635;transcript_name=HG00140_ch_T0000635;gene_name=TSPY9;ID=exon:HG00140_ch_T0000635:1;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6753821	6753902	.	-	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000635;gene_id=HG00140_ch_G0000182;Parent=HG00140_ch_T0000635;transcript_name=HG00140_ch_T0000635;gene_name=TSPY9;ID=CDS:HG00140_ch_T0000635:1;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6753903	6754008	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000635;gene_id=HG00140_ch_G0000182;Parent=HG00140_ch_T0000635;transcript_name=HG00140_ch_T0000635;gene_name=TSPY9;ID=intron:HG00140_ch_T0000635:1;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6754009	6754154	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000635;gene_id=HG00140_ch_G0000182;Parent=HG00140_ch_T0000635;transcript_name=HG00140_ch_T0000635;gene_name=TSPY9;ID=exon:HG00140_ch_T0000635:2;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6754009	6754154	.	-	2	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000635;gene_id=HG00140_ch_G0000182;Parent=HG00140_ch_T0000635;transcript_name=HG00140_ch_T0000635;gene_name=TSPY9;ID=CDS:HG00140_ch_T0000635:2;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6754155	6754255	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000635;gene_id=HG00140_ch_G0000182;Parent=HG00140_ch_T0000635;transcript_name=HG00140_ch_T0000635;gene_name=TSPY9;ID=intron:HG00140_ch_T0000635:2;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6754256	6754367	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000635;gene_id=HG00140_ch_G0000182;Parent=HG00140_ch_T0000635;transcript_name=HG00140_ch_T0000635;gene_name=TSPY9;ID=exon:HG00140_ch_T0000635:3;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6754256	6754367	.	-	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000635;gene_id=HG00140_ch_G0000182;Parent=HG00140_ch_T0000635;transcript_name=HG00140_ch_T0000635;gene_name=TSPY9;ID=CDS:HG00140_ch_T0000635:3;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6754368	6754495	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000635;gene_id=HG00140_ch_G0000182;Parent=HG00140_ch_T0000635;transcript_name=HG00140_ch_T0000635;gene_name=TSPY9;ID=intron:HG00140_ch_T0000635:3;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6754496	6754573	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000635;gene_id=HG00140_ch_G0000182;Parent=HG00140_ch_T0000635;transcript_name=HG00140_ch_T0000635;gene_name=TSPY9;ID=exon:HG00140_ch_T0000635:4;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6754496	6754573	.	-	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000635;gene_id=HG00140_ch_G0000182;Parent=HG00140_ch_T0000635;transcript_name=HG00140_ch_T0000635;gene_name=TSPY9;ID=CDS:HG00140_ch_T0000635:4;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6754574	6755180	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000635;gene_id=HG00140_ch_G0000182;Parent=HG00140_ch_T0000635;transcript_name=HG00140_ch_T0000635;gene_name=TSPY9;ID=intron:HG00140_ch_T0000635:4;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6755181	6755730	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000635;gene_id=HG00140_ch_G0000182;Parent=HG00140_ch_T0000635;transcript_name=HG00140_ch_T0000635;gene_name=TSPY9;ID=exon:HG00140_ch_T0000635:5;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6755181	6755684	.	-	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000635;gene_id=HG00140_ch_G0000182;Parent=HG00140_ch_T0000635;transcript_name=HG00140_ch_T0000635;gene_name=TSPY9;ID=CDS:HG00140_ch_T0000635:5;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6755682	6755684	.	-	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000635;gene_id=HG00140_ch_G0000182;Parent=HG00140_ch_T0000635;transcript_name=HG00140_ch_T0000635;gene_name=TSPY9;ID=start_codon:HG00140_ch_T0000635;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6756684	6758676	.	+	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8_1;gene_id=HG00140_ch_G0000183;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG00140_ch_G0000183;Name=FAM197Y5
HG00140_chrY	CAT	transcript	6756684	6758676	1000	+	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000636;gene_id=HG00140_ch_G0000183;Parent=HG00140_ch_G0000183;transcript_name=HG00140_ch_T0000636;gene_name=FAM197Y5;ID=HG00140_ch_T0000636;Name=FAM197Y5
HG00140_chrY	CAT	exon	6756684	6756994	.	+	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000636;gene_id=HG00140_ch_G0000183;Parent=HG00140_ch_T0000636;transcript_name=HG00140_ch_T0000636;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000636:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6756995	6758530	.	+	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000636;gene_id=HG00140_ch_G0000183;Parent=HG00140_ch_T0000636;transcript_name=HG00140_ch_T0000636;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000636:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6758531	6758676	.	+	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000636;gene_id=HG00140_ch_G0000183;Parent=HG00140_ch_T0000636;transcript_name=HG00140_ch_T0000636;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000636:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6758331	6764075	.	+	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1;gene_id=HG00140_ch_G0000184;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG00140_ch_G0000184;Name=FAM197Y5
HG00140_chrY	CAT	transcript	6758331	6764075	1000	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000637;gene_id=HG00140_ch_G0000184;Parent=HG00140_ch_G0000184;transcript_name=HG00140_ch_T0000637;gene_name=FAM197Y5;ID=HG00140_ch_T0000637;Name=FAM197Y5
HG00140_chrY	CAT	exon	6758331	6758444	.	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000637;gene_id=HG00140_ch_G0000184;Parent=HG00140_ch_T0000637;transcript_name=HG00140_ch_T0000637;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000637:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6758445	6760249	.	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000637;gene_id=HG00140_ch_G0000184;Parent=HG00140_ch_T0000637;transcript_name=HG00140_ch_T0000637;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000637:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6760250	6760335	.	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000637;gene_id=HG00140_ch_G0000184;Parent=HG00140_ch_T0000637;transcript_name=HG00140_ch_T0000637;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000637:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6760336	6763885	.	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000637;gene_id=HG00140_ch_G0000184;Parent=HG00140_ch_T0000637;transcript_name=HG00140_ch_T0000637;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000637:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6763886	6764075	.	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000637;gene_id=HG00140_ch_G0000184;Parent=HG00140_ch_T0000637;transcript_name=HG00140_ch_T0000637;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000637:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6758343	6763945	1000	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000638;gene_id=HG00140_ch_G0000184;Parent=HG00140_ch_G0000184;transcript_name=HG00140_ch_T0000638;gene_name=FAM197Y5;ID=HG00140_ch_T0000638;Name=FAM197Y5
HG00140_chrY	CAT	exon	6758343	6758444	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000638;gene_id=HG00140_ch_G0000184;Parent=HG00140_ch_T0000638;transcript_name=HG00140_ch_T0000638;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000638:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6758445	6758530	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000638;gene_id=HG00140_ch_G0000184;Parent=HG00140_ch_T0000638;transcript_name=HG00140_ch_T0000638;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000638:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6758531	6758676	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000638;gene_id=HG00140_ch_G0000184;Parent=HG00140_ch_T0000638;transcript_name=HG00140_ch_T0000638;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000638:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6758677	6760176	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000638;gene_id=HG00140_ch_G0000184;Parent=HG00140_ch_T0000638;transcript_name=HG00140_ch_T0000638;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000638:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6760177	6760335	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000638;gene_id=HG00140_ch_G0000184;Parent=HG00140_ch_T0000638;transcript_name=HG00140_ch_T0000638;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000638:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6760336	6763885	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000638;gene_id=HG00140_ch_G0000184;Parent=HG00140_ch_T0000638;transcript_name=HG00140_ch_T0000638;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000638:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6763886	6763945	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000638;gene_id=HG00140_ch_G0000184;Parent=HG00140_ch_T0000638;transcript_name=HG00140_ch_T0000638;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000638:3;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6773254	6776074	.	-	.	source_gene_common_name=TSPY4;source_gene=ENSG00000233803.9;alternative_source_transcripts=ENST00000477879.1;gene_id=HG00140_ch_G0000185;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff;ID=HG00140_ch_G0000185;Name=TSPY4
HG00140_chrY	CAT	transcript	6773254	6776028	1000	-	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=297.909;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000477879.1;transcript_id=HG00140_ch_T0000639;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_G0000185;transcript_name=HG00140_ch_T0000639;gene_name=TSPY4;ID=HG00140_ch_T0000639;Name=TSPY4
HG00140_chrY	CAT	exon	6773254	6774037	.	-	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=297.909;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000477879.1;transcript_id=HG00140_ch_T0000639;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000639;transcript_name=HG00140_ch_T0000639;gene_name=TSPY4;ID=exon:HG00140_ch_T0000639:0;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6774038	6774164	.	-	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=297.909;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000477879.1;transcript_id=HG00140_ch_T0000639;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000639;transcript_name=HG00140_ch_T0000639;gene_name=TSPY4;ID=intron:HG00140_ch_T0000639:0;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6774165	6774711	.	-	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=297.909;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000477879.1;transcript_id=HG00140_ch_T0000639;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000639;transcript_name=HG00140_ch_T0000639;gene_name=TSPY4;ID=exon:HG00140_ch_T0000639:1;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6774712	6774839	.	-	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=297.909;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000477879.1;transcript_id=HG00140_ch_T0000639;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000639;transcript_name=HG00140_ch_T0000639;gene_name=TSPY4;ID=intron:HG00140_ch_T0000639:1;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6774840	6774917	.	-	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=297.909;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000477879.1;transcript_id=HG00140_ch_T0000639;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000639;transcript_name=HG00140_ch_T0000639;gene_name=TSPY4;ID=exon:HG00140_ch_T0000639:2;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6774918	6775524	.	-	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=297.909;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000477879.1;transcript_id=HG00140_ch_T0000639;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000639;transcript_name=HG00140_ch_T0000639;gene_name=TSPY4;ID=intron:HG00140_ch_T0000639:2;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6775525	6776028	.	-	.	source_transcript=ENST00000466036.1;source_transcript_name=TSPY4-203;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466036.1;transcript_score=297.909;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000477879.1;transcript_id=HG00140_ch_T0000639;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000639;transcript_name=HG00140_ch_T0000639;gene_name=TSPY4;ID=exon:HG00140_ch_T0000639:3;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6773260	6776074	100	-	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00140_ch_T0000640;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_G0000185;transcript_name=HG00140_ch_T0000640;gene_name=TSPY4;ID=HG00140_ch_T0000640;Name=TSPY4
HG00140_chrY	CAT	exon	6773260	6773470	.	-	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00140_ch_T0000640;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000640;transcript_name=HG00140_ch_T0000640;gene_name=TSPY4;ID=exon:HG00140_ch_T0000640:0;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6773448	6773470	.	-	2	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00140_ch_T0000640;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000640;transcript_name=HG00140_ch_T0000640;gene_name=TSPY4;ID=CDS:HG00140_ch_T0000640:0;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6773448	6773450	.	-	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00140_ch_T0000640;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000640;transcript_name=HG00140_ch_T0000640;gene_name=TSPY4;ID=stop_codon:HG00140_ch_T0000640;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6773471	6774164	.	-	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00140_ch_T0000640;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000640;transcript_name=HG00140_ch_T0000640;gene_name=TSPY4;ID=intron:HG00140_ch_T0000640:0;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6774165	6774246	.	-	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00140_ch_T0000640;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000640;transcript_name=HG00140_ch_T0000640;gene_name=TSPY4;ID=exon:HG00140_ch_T0000640:1;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6774165	6774246	.	-	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00140_ch_T0000640;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000640;transcript_name=HG00140_ch_T0000640;gene_name=TSPY4;ID=CDS:HG00140_ch_T0000640:1;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6774247	6774352	.	-	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00140_ch_T0000640;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000640;transcript_name=HG00140_ch_T0000640;gene_name=TSPY4;ID=intron:HG00140_ch_T0000640:1;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6774353	6774498	.	-	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00140_ch_T0000640;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000640;transcript_name=HG00140_ch_T0000640;gene_name=TSPY4;ID=exon:HG00140_ch_T0000640:2;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6774353	6774498	.	-	2	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00140_ch_T0000640;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000640;transcript_name=HG00140_ch_T0000640;gene_name=TSPY4;ID=CDS:HG00140_ch_T0000640:2;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6774499	6774599	.	-	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00140_ch_T0000640;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000640;transcript_name=HG00140_ch_T0000640;gene_name=TSPY4;ID=intron:HG00140_ch_T0000640:2;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6774600	6774711	.	-	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00140_ch_T0000640;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000640;transcript_name=HG00140_ch_T0000640;gene_name=TSPY4;ID=exon:HG00140_ch_T0000640:3;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6774600	6774711	.	-	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00140_ch_T0000640;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000640;transcript_name=HG00140_ch_T0000640;gene_name=TSPY4;ID=CDS:HG00140_ch_T0000640:3;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6774712	6774839	.	-	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00140_ch_T0000640;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000640;transcript_name=HG00140_ch_T0000640;gene_name=TSPY4;ID=intron:HG00140_ch_T0000640:3;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6774840	6774917	.	-	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00140_ch_T0000640;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000640;transcript_name=HG00140_ch_T0000640;gene_name=TSPY4;ID=exon:HG00140_ch_T0000640:4;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6774840	6774917	.	-	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00140_ch_T0000640;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000640;transcript_name=HG00140_ch_T0000640;gene_name=TSPY4;ID=CDS:HG00140_ch_T0000640:4;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6774918	6775524	.	-	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00140_ch_T0000640;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000640;transcript_name=HG00140_ch_T0000640;gene_name=TSPY4;ID=intron:HG00140_ch_T0000640:4;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6775525	6776074	.	-	.	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00140_ch_T0000640;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000640;transcript_name=HG00140_ch_T0000640;gene_name=TSPY4;ID=exon:HG00140_ch_T0000640:5;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6775525	6776028	.	-	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00140_ch_T0000640;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000640;transcript_name=HG00140_ch_T0000640;gene_name=TSPY4;ID=CDS:HG00140_ch_T0000640:5;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6776026	6776028	.	-	0	source_transcript=ENST00000426950.6;source_transcript_name=TSPY4-202;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426950.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426950.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00140_ch_T0000640;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000640;transcript_name=HG00140_ch_T0000640;gene_name=TSPY4;ID=start_codon:HG00140_ch_T0000640;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6773261	6776028	100	-	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00140_ch_T0000641;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_G0000185;transcript_name=HG00140_ch_T0000641;gene_name=TSPY4;ID=HG00140_ch_T0000641;Name=TSPY4
HG00140_chrY	CAT	exon	6773261	6773470	.	-	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00140_ch_T0000641;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000641;transcript_name=HG00140_ch_T0000641;gene_name=TSPY4;ID=exon:HG00140_ch_T0000641:0;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6773471	6774164	.	-	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00140_ch_T0000641;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000641;transcript_name=HG00140_ch_T0000641;gene_name=TSPY4;ID=intron:HG00140_ch_T0000641:0;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6774165	6774257	.	-	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00140_ch_T0000641;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000641;transcript_name=HG00140_ch_T0000641;gene_name=TSPY4;ID=exon:HG00140_ch_T0000641:1;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6774195	6774257	.	-	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00140_ch_T0000641;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000641;transcript_name=HG00140_ch_T0000641;gene_name=TSPY4;ID=CDS:HG00140_ch_T0000641:0;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6774195	6774197	.	-	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00140_ch_T0000641;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000641;transcript_name=HG00140_ch_T0000641;gene_name=TSPY4;ID=stop_codon:HG00140_ch_T0000641;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6774258	6774352	.	-	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00140_ch_T0000641;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000641;transcript_name=HG00140_ch_T0000641;gene_name=TSPY4;ID=intron:HG00140_ch_T0000641:1;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6774353	6774498	.	-	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00140_ch_T0000641;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000641;transcript_name=HG00140_ch_T0000641;gene_name=TSPY4;ID=exon:HG00140_ch_T0000641:2;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6774353	6774498	.	-	2	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00140_ch_T0000641;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000641;transcript_name=HG00140_ch_T0000641;gene_name=TSPY4;ID=CDS:HG00140_ch_T0000641:1;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6774499	6774599	.	-	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00140_ch_T0000641;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000641;transcript_name=HG00140_ch_T0000641;gene_name=TSPY4;ID=intron:HG00140_ch_T0000641:2;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6774600	6774711	.	-	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00140_ch_T0000641;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000641;transcript_name=HG00140_ch_T0000641;gene_name=TSPY4;ID=exon:HG00140_ch_T0000641:3;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6774600	6774711	.	-	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00140_ch_T0000641;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000641;transcript_name=HG00140_ch_T0000641;gene_name=TSPY4;ID=CDS:HG00140_ch_T0000641:2;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6774712	6774839	.	-	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00140_ch_T0000641;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000641;transcript_name=HG00140_ch_T0000641;gene_name=TSPY4;ID=intron:HG00140_ch_T0000641:3;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6774840	6774917	.	-	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00140_ch_T0000641;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000641;transcript_name=HG00140_ch_T0000641;gene_name=TSPY4;ID=exon:HG00140_ch_T0000641:4;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6774840	6774917	.	-	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00140_ch_T0000641;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000641;transcript_name=HG00140_ch_T0000641;gene_name=TSPY4;ID=CDS:HG00140_ch_T0000641:3;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6774918	6775524	.	-	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00140_ch_T0000641;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000641;transcript_name=HG00140_ch_T0000641;gene_name=TSPY4;ID=intron:HG00140_ch_T0000641:4;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6775525	6776028	.	-	.	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00140_ch_T0000641;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000641;transcript_name=HG00140_ch_T0000641;gene_name=TSPY4;ID=exon:HG00140_ch_T0000641:5;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6775525	6776028	.	-	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00140_ch_T0000641;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000641;transcript_name=HG00140_ch_T0000641;gene_name=TSPY4;ID=CDS:HG00140_ch_T0000641:4;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6776026	6776028	.	-	0	source_transcript=ENST00000383008.1;source_transcript_name=TSPY4-201;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383008.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00140_ch_T0000641;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000641;transcript_name=HG00140_ch_T0000641;gene_name=TSPY4;ID=start_codon:HG00140_ch_T0000641;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6773269	6774650	1000	-	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000642;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_G0000185;transcript_name=HG00140_ch_T0000642;gene_name=TSPY4;ID=HG00140_ch_T0000642;Name=TSPY4
HG00140_chrY	CAT	exon	6773269	6773470	.	-	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000642;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000642;transcript_name=HG00140_ch_T0000642;gene_name=TSPY4;ID=exon:HG00140_ch_T0000642:0;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6773471	6774164	.	-	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000642;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000642;transcript_name=HG00140_ch_T0000642;gene_name=TSPY4;ID=intron:HG00140_ch_T0000642:0;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6774165	6774257	.	-	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000642;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000642;transcript_name=HG00140_ch_T0000642;gene_name=TSPY4;ID=exon:HG00140_ch_T0000642:1;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6774258	6774352	.	-	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000642;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000642;transcript_name=HG00140_ch_T0000642;gene_name=TSPY4;ID=intron:HG00140_ch_T0000642:1;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6774353	6774650	.	-	.	source_transcript=ENST00000482082.1;source_transcript_name=TSPY4-204;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000482082.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000482082.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000642;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000642;transcript_name=HG00140_ch_T0000642;gene_name=TSPY4;ID=exon:HG00140_ch_T0000642:2;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6773381	6776074	100	-	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000643;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_G0000185;transcript_name=HG00140_ch_T0000643;gene_name=TSPY4;ID=HG00140_ch_T0000643;Name=TSPY4
HG00140_chrY	CAT	exon	6773381	6773470	.	-	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000643;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000643;transcript_name=HG00140_ch_T0000643;gene_name=TSPY4;ID=exon:HG00140_ch_T0000643:0;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6773448	6773470	.	-	2	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000643;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000643;transcript_name=HG00140_ch_T0000643;gene_name=TSPY4;ID=CDS:HG00140_ch_T0000643:0;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6773448	6773450	.	-	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000643;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000643;transcript_name=HG00140_ch_T0000643;gene_name=TSPY4;ID=stop_codon:HG00140_ch_T0000643;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6773471	6774164	.	-	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000643;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000643;transcript_name=HG00140_ch_T0000643;gene_name=TSPY4;ID=intron:HG00140_ch_T0000643:0;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6774165	6774246	.	-	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000643;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000643;transcript_name=HG00140_ch_T0000643;gene_name=TSPY4;ID=exon:HG00140_ch_T0000643:1;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6774165	6774246	.	-	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000643;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000643;transcript_name=HG00140_ch_T0000643;gene_name=TSPY4;ID=CDS:HG00140_ch_T0000643:1;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6774247	6774352	.	-	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000643;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000643;transcript_name=HG00140_ch_T0000643;gene_name=TSPY4;ID=intron:HG00140_ch_T0000643:1;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6774353	6774498	.	-	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000643;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000643;transcript_name=HG00140_ch_T0000643;gene_name=TSPY4;ID=exon:HG00140_ch_T0000643:2;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6774353	6774498	.	-	2	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000643;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000643;transcript_name=HG00140_ch_T0000643;gene_name=TSPY4;ID=CDS:HG00140_ch_T0000643:2;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6774499	6774599	.	-	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000643;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000643;transcript_name=HG00140_ch_T0000643;gene_name=TSPY4;ID=intron:HG00140_ch_T0000643:2;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6774600	6774711	.	-	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000643;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000643;transcript_name=HG00140_ch_T0000643;gene_name=TSPY4;ID=exon:HG00140_ch_T0000643:3;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6774600	6774711	.	-	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000643;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000643;transcript_name=HG00140_ch_T0000643;gene_name=TSPY4;ID=CDS:HG00140_ch_T0000643:3;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6774712	6774839	.	-	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000643;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000643;transcript_name=HG00140_ch_T0000643;gene_name=TSPY4;ID=intron:HG00140_ch_T0000643:3;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6774840	6774917	.	-	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000643;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000643;transcript_name=HG00140_ch_T0000643;gene_name=TSPY4;ID=exon:HG00140_ch_T0000643:4;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6774840	6774917	.	-	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000643;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000643;transcript_name=HG00140_ch_T0000643;gene_name=TSPY4;ID=CDS:HG00140_ch_T0000643:4;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6774918	6775524	.	-	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000643;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000643;transcript_name=HG00140_ch_T0000643;gene_name=TSPY4;ID=intron:HG00140_ch_T0000643:4;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6775525	6775662	.	-	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000643;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000643;transcript_name=HG00140_ch_T0000643;gene_name=TSPY4;ID=exon:HG00140_ch_T0000643:5;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6775525	6775662	.	-	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000643;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000643;transcript_name=HG00140_ch_T0000643;gene_name=TSPY4;ID=CDS:HG00140_ch_T0000643:5;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6775663	6775941	.	-	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000643;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000643;transcript_name=HG00140_ch_T0000643;gene_name=TSPY4;ID=intron:HG00140_ch_T0000643:5;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6775942	6776074	.	-	.	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000643;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000643;transcript_name=HG00140_ch_T0000643;gene_name=TSPY4;ID=exon:HG00140_ch_T0000643:6;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6775942	6776028	.	-	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000643;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000643;transcript_name=HG00140_ch_T0000643;gene_name=TSPY4;ID=CDS:HG00140_ch_T0000643:6;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6776026	6776028	.	-	0	source_transcript=ENST00000640033.2;source_transcript_name=TSPY4-205;source_gene=ENSG00000233803.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000233803.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000640033.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000640033.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG00140_ch_T0000643;gene_id=HG00140_ch_G0000185;Parent=HG00140_ch_T0000643;transcript_name=HG00140_ch_T0000643;gene_name=TSPY4;ID=start_codon:HG00140_ch_T0000643;Name=TSPY4;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6777028	6779020	.	+	.	source_gene_common_name=FAM197Y4;source_gene=ENSG00000274196.6;gene_id=HG00140_ch_G0000186;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y4;gene_sources=liftoff;ID=HG00140_ch_G0000186;Name=FAM197Y4
HG00140_chrY	CAT	transcript	6777028	6779020	1000	+	.	source_transcript=ENST00000622692.2;source_transcript_name=FAM197Y4-201;source_gene=ENSG00000274196.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000274196.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000622692.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000622692.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG00140_ch_T0000644;gene_id=HG00140_ch_G0000186;Parent=HG00140_ch_G0000186;transcript_name=HG00140_ch_T0000644;gene_name=FAM197Y4;ID=HG00140_ch_T0000644;Name=FAM197Y4
HG00140_chrY	CAT	exon	6777028	6777338	.	+	.	source_transcript=ENST00000622692.2;source_transcript_name=FAM197Y4-201;source_gene=ENSG00000274196.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000274196.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000622692.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000622692.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG00140_ch_T0000644;gene_id=HG00140_ch_G0000186;Parent=HG00140_ch_T0000644;transcript_name=HG00140_ch_T0000644;gene_name=FAM197Y4;ID=exon:HG00140_ch_T0000644:0;Name=FAM197Y4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6777339	6778874	.	+	.	source_transcript=ENST00000622692.2;source_transcript_name=FAM197Y4-201;source_gene=ENSG00000274196.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000274196.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000622692.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000622692.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG00140_ch_T0000644;gene_id=HG00140_ch_G0000186;Parent=HG00140_ch_T0000644;transcript_name=HG00140_ch_T0000644;gene_name=FAM197Y4;ID=intron:HG00140_ch_T0000644:0;Name=FAM197Y4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6778875	6779020	.	+	.	source_transcript=ENST00000622692.2;source_transcript_name=FAM197Y4-201;source_gene=ENSG00000274196.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000274196.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000622692.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000622692.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG00140_ch_T0000644;gene_id=HG00140_ch_G0000186;Parent=HG00140_ch_T0000644;transcript_name=HG00140_ch_T0000644;gene_name=FAM197Y4;ID=exon:HG00140_ch_T0000644:1;Name=FAM197Y4;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6778687	6784286	.	+	.	source_gene_common_name=FAM197Y4;source_gene=ENSG00000290373.1_1;gene_id=HG00140_ch_G0000187;gene_biotype=lncRNA;gene_name=FAM197Y4;gene_sources=liftoff;ID=HG00140_ch_G0000187;Name=FAM197Y4
HG00140_chrY	CAT	transcript	6778687	6784286	1000	+	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG00140_ch_T0000645;gene_id=HG00140_ch_G0000187;Parent=HG00140_ch_G0000187;transcript_name=HG00140_ch_T0000645;gene_name=FAM197Y4;ID=HG00140_ch_T0000645;Name=FAM197Y4
HG00140_chrY	CAT	exon	6778687	6778788	.	+	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG00140_ch_T0000645;gene_id=HG00140_ch_G0000187;Parent=HG00140_ch_T0000645;transcript_name=HG00140_ch_T0000645;gene_name=FAM197Y4;ID=exon:HG00140_ch_T0000645:0;Name=FAM197Y4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6778789	6778874	.	+	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG00140_ch_T0000645;gene_id=HG00140_ch_G0000187;Parent=HG00140_ch_T0000645;transcript_name=HG00140_ch_T0000645;gene_name=FAM197Y4;ID=intron:HG00140_ch_T0000645:0;Name=FAM197Y4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6778875	6779020	.	+	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG00140_ch_T0000645;gene_id=HG00140_ch_G0000187;Parent=HG00140_ch_T0000645;transcript_name=HG00140_ch_T0000645;gene_name=FAM197Y4;ID=exon:HG00140_ch_T0000645:1;Name=FAM197Y4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6779021	6780518	.	+	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG00140_ch_T0000645;gene_id=HG00140_ch_G0000187;Parent=HG00140_ch_T0000645;transcript_name=HG00140_ch_T0000645;gene_name=FAM197Y4;ID=intron:HG00140_ch_T0000645:1;Name=FAM197Y4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6780519	6780677	.	+	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG00140_ch_T0000645;gene_id=HG00140_ch_G0000187;Parent=HG00140_ch_T0000645;transcript_name=HG00140_ch_T0000645;gene_name=FAM197Y4;ID=exon:HG00140_ch_T0000645:2;Name=FAM197Y4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6780678	6784226	.	+	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG00140_ch_T0000645;gene_id=HG00140_ch_G0000187;Parent=HG00140_ch_T0000645;transcript_name=HG00140_ch_T0000645;gene_name=FAM197Y4;ID=intron:HG00140_ch_T0000645:2;Name=FAM197Y4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6784227	6784286	.	+	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG00140_ch_T0000645;gene_id=HG00140_ch_G0000187;Parent=HG00140_ch_T0000645;transcript_name=HG00140_ch_T0000645;gene_name=FAM197Y4;ID=exon:HG00140_ch_T0000645:3;Name=FAM197Y4;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6793577	6796373	.	-	.	source_gene_common_name=TSPY1;source_gene=ENSG00000258992.7;gene_id=HG00140_ch_G0000188;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff;ID=HG00140_ch_G0000188;Name=TSPY1
HG00140_chrY	CAT	transcript	6793577	6796373	100	-	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00140_ch_T0000646;gene_id=HG00140_ch_G0000188;Parent=HG00140_ch_G0000188;transcript_name=HG00140_ch_T0000646;gene_name=TSPY1;ID=HG00140_ch_T0000646;Name=TSPY1
HG00140_chrY	CAT	exon	6793577	6793787	.	-	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00140_ch_T0000646;gene_id=HG00140_ch_G0000188;Parent=HG00140_ch_T0000646;transcript_name=HG00140_ch_T0000646;gene_name=TSPY1;ID=exon:HG00140_ch_T0000646:0;Name=TSPY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6793765	6793787	.	-	2	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00140_ch_T0000646;gene_id=HG00140_ch_G0000188;Parent=HG00140_ch_T0000646;transcript_name=HG00140_ch_T0000646;gene_name=TSPY1;ID=CDS:HG00140_ch_T0000646:0;Name=TSPY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6793765	6793767	.	-	0	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00140_ch_T0000646;gene_id=HG00140_ch_G0000188;Parent=HG00140_ch_T0000646;transcript_name=HG00140_ch_T0000646;gene_name=TSPY1;ID=stop_codon:HG00140_ch_T0000646;Name=TSPY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6793788	6794481	.	-	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00140_ch_T0000646;gene_id=HG00140_ch_G0000188;Parent=HG00140_ch_T0000646;transcript_name=HG00140_ch_T0000646;gene_name=TSPY1;ID=intron:HG00140_ch_T0000646:0;Name=TSPY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6794482	6794563	.	-	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00140_ch_T0000646;gene_id=HG00140_ch_G0000188;Parent=HG00140_ch_T0000646;transcript_name=HG00140_ch_T0000646;gene_name=TSPY1;ID=exon:HG00140_ch_T0000646:1;Name=TSPY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6794482	6794563	.	-	0	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00140_ch_T0000646;gene_id=HG00140_ch_G0000188;Parent=HG00140_ch_T0000646;transcript_name=HG00140_ch_T0000646;gene_name=TSPY1;ID=CDS:HG00140_ch_T0000646:1;Name=TSPY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6794564	6794669	.	-	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00140_ch_T0000646;gene_id=HG00140_ch_G0000188;Parent=HG00140_ch_T0000646;transcript_name=HG00140_ch_T0000646;gene_name=TSPY1;ID=intron:HG00140_ch_T0000646:1;Name=TSPY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6794670	6794815	.	-	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00140_ch_T0000646;gene_id=HG00140_ch_G0000188;Parent=HG00140_ch_T0000646;transcript_name=HG00140_ch_T0000646;gene_name=TSPY1;ID=exon:HG00140_ch_T0000646:2;Name=TSPY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6794670	6794815	.	-	2	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00140_ch_T0000646;gene_id=HG00140_ch_G0000188;Parent=HG00140_ch_T0000646;transcript_name=HG00140_ch_T0000646;gene_name=TSPY1;ID=CDS:HG00140_ch_T0000646:2;Name=TSPY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6794816	6794916	.	-	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00140_ch_T0000646;gene_id=HG00140_ch_G0000188;Parent=HG00140_ch_T0000646;transcript_name=HG00140_ch_T0000646;gene_name=TSPY1;ID=intron:HG00140_ch_T0000646:2;Name=TSPY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6794917	6795028	.	-	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00140_ch_T0000646;gene_id=HG00140_ch_G0000188;Parent=HG00140_ch_T0000646;transcript_name=HG00140_ch_T0000646;gene_name=TSPY1;ID=exon:HG00140_ch_T0000646:3;Name=TSPY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6794917	6795028	.	-	0	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00140_ch_T0000646;gene_id=HG00140_ch_G0000188;Parent=HG00140_ch_T0000646;transcript_name=HG00140_ch_T0000646;gene_name=TSPY1;ID=CDS:HG00140_ch_T0000646:3;Name=TSPY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6795029	6795156	.	-	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00140_ch_T0000646;gene_id=HG00140_ch_G0000188;Parent=HG00140_ch_T0000646;transcript_name=HG00140_ch_T0000646;gene_name=TSPY1;ID=intron:HG00140_ch_T0000646:3;Name=TSPY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6795157	6795234	.	-	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00140_ch_T0000646;gene_id=HG00140_ch_G0000188;Parent=HG00140_ch_T0000646;transcript_name=HG00140_ch_T0000646;gene_name=TSPY1;ID=exon:HG00140_ch_T0000646:4;Name=TSPY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6795157	6795234	.	-	0	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00140_ch_T0000646;gene_id=HG00140_ch_G0000188;Parent=HG00140_ch_T0000646;transcript_name=HG00140_ch_T0000646;gene_name=TSPY1;ID=CDS:HG00140_ch_T0000646:4;Name=TSPY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6795235	6795841	.	-	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00140_ch_T0000646;gene_id=HG00140_ch_G0000188;Parent=HG00140_ch_T0000646;transcript_name=HG00140_ch_T0000646;gene_name=TSPY1;ID=intron:HG00140_ch_T0000646:4;Name=TSPY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6795842	6796373	.	-	.	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00140_ch_T0000646;gene_id=HG00140_ch_G0000188;Parent=HG00140_ch_T0000646;transcript_name=HG00140_ch_T0000646;gene_name=TSPY1;ID=exon:HG00140_ch_T0000646:5;Name=TSPY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6795842	6796327	.	-	0	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00140_ch_T0000646;gene_id=HG00140_ch_G0000188;Parent=HG00140_ch_T0000646;transcript_name=HG00140_ch_T0000646;gene_name=TSPY1;ID=CDS:HG00140_ch_T0000646:5;Name=TSPY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6796325	6796327	.	-	0	source_transcript=ENST00000451548.6;source_transcript_name=TSPY1-202;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000451548.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000451548.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00140_ch_T0000646;gene_id=HG00140_ch_G0000188;Parent=HG00140_ch_T0000646;transcript_name=HG00140_ch_T0000646;gene_name=TSPY1;ID=start_codon:HG00140_ch_T0000646;Name=TSPY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6793578	6796373	100	-	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00140_ch_T0000647;gene_id=HG00140_ch_G0000188;Parent=HG00140_ch_G0000188;transcript_name=HG00140_ch_T0000647;gene_name=TSPY1;ID=HG00140_ch_T0000647;Name=TSPY1
HG00140_chrY	CAT	exon	6793578	6793787	.	-	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00140_ch_T0000647;gene_id=HG00140_ch_G0000188;Parent=HG00140_ch_T0000647;transcript_name=HG00140_ch_T0000647;gene_name=TSPY1;ID=exon:HG00140_ch_T0000647:0;Name=TSPY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6793788	6794481	.	-	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00140_ch_T0000647;gene_id=HG00140_ch_G0000188;Parent=HG00140_ch_T0000647;transcript_name=HG00140_ch_T0000647;gene_name=TSPY1;ID=intron:HG00140_ch_T0000647:0;Name=TSPY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6794482	6794574	.	-	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00140_ch_T0000647;gene_id=HG00140_ch_G0000188;Parent=HG00140_ch_T0000647;transcript_name=HG00140_ch_T0000647;gene_name=TSPY1;ID=exon:HG00140_ch_T0000647:1;Name=TSPY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6794512	6794574	.	-	0	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00140_ch_T0000647;gene_id=HG00140_ch_G0000188;Parent=HG00140_ch_T0000647;transcript_name=HG00140_ch_T0000647;gene_name=TSPY1;ID=CDS:HG00140_ch_T0000647:0;Name=TSPY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6794512	6794514	.	-	0	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00140_ch_T0000647;gene_id=HG00140_ch_G0000188;Parent=HG00140_ch_T0000647;transcript_name=HG00140_ch_T0000647;gene_name=TSPY1;ID=stop_codon:HG00140_ch_T0000647;Name=TSPY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6794575	6794669	.	-	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00140_ch_T0000647;gene_id=HG00140_ch_G0000188;Parent=HG00140_ch_T0000647;transcript_name=HG00140_ch_T0000647;gene_name=TSPY1;ID=intron:HG00140_ch_T0000647:1;Name=TSPY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6794670	6794815	.	-	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00140_ch_T0000647;gene_id=HG00140_ch_G0000188;Parent=HG00140_ch_T0000647;transcript_name=HG00140_ch_T0000647;gene_name=TSPY1;ID=exon:HG00140_ch_T0000647:2;Name=TSPY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6794670	6794815	.	-	2	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00140_ch_T0000647;gene_id=HG00140_ch_G0000188;Parent=HG00140_ch_T0000647;transcript_name=HG00140_ch_T0000647;gene_name=TSPY1;ID=CDS:HG00140_ch_T0000647:1;Name=TSPY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6794816	6794916	.	-	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00140_ch_T0000647;gene_id=HG00140_ch_G0000188;Parent=HG00140_ch_T0000647;transcript_name=HG00140_ch_T0000647;gene_name=TSPY1;ID=intron:HG00140_ch_T0000647:2;Name=TSPY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6794917	6795028	.	-	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00140_ch_T0000647;gene_id=HG00140_ch_G0000188;Parent=HG00140_ch_T0000647;transcript_name=HG00140_ch_T0000647;gene_name=TSPY1;ID=exon:HG00140_ch_T0000647:3;Name=TSPY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6794917	6795028	.	-	0	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00140_ch_T0000647;gene_id=HG00140_ch_G0000188;Parent=HG00140_ch_T0000647;transcript_name=HG00140_ch_T0000647;gene_name=TSPY1;ID=CDS:HG00140_ch_T0000647:2;Name=TSPY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6795029	6795156	.	-	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00140_ch_T0000647;gene_id=HG00140_ch_G0000188;Parent=HG00140_ch_T0000647;transcript_name=HG00140_ch_T0000647;gene_name=TSPY1;ID=intron:HG00140_ch_T0000647:3;Name=TSPY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6795157	6795234	.	-	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00140_ch_T0000647;gene_id=HG00140_ch_G0000188;Parent=HG00140_ch_T0000647;transcript_name=HG00140_ch_T0000647;gene_name=TSPY1;ID=exon:HG00140_ch_T0000647:4;Name=TSPY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6795157	6795234	.	-	0	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00140_ch_T0000647;gene_id=HG00140_ch_G0000188;Parent=HG00140_ch_T0000647;transcript_name=HG00140_ch_T0000647;gene_name=TSPY1;ID=CDS:HG00140_ch_T0000647:3;Name=TSPY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6795235	6795841	.	-	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00140_ch_T0000647;gene_id=HG00140_ch_G0000188;Parent=HG00140_ch_T0000647;transcript_name=HG00140_ch_T0000647;gene_name=TSPY1;ID=intron:HG00140_ch_T0000647:4;Name=TSPY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6795842	6796373	.	-	.	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00140_ch_T0000647;gene_id=HG00140_ch_G0000188;Parent=HG00140_ch_T0000647;transcript_name=HG00140_ch_T0000647;gene_name=TSPY1;ID=exon:HG00140_ch_T0000647:5;Name=TSPY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6795842	6796327	.	-	0	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00140_ch_T0000647;gene_id=HG00140_ch_G0000188;Parent=HG00140_ch_T0000647;transcript_name=HG00140_ch_T0000647;gene_name=TSPY1;ID=CDS:HG00140_ch_T0000647:4;Name=TSPY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6796325	6796327	.	-	0	source_transcript=ENST00000423647.6;source_transcript_name=TSPY1-201;source_gene=ENSG00000258992.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000258992.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000423647.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000423647.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG00140_ch_T0000647;gene_id=HG00140_ch_G0000188;Parent=HG00140_ch_T0000647;transcript_name=HG00140_ch_T0000647;gene_name=TSPY1;ID=start_codon:HG00140_ch_T0000647;Name=TSPY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6797328	6799320	.	+	.	source_gene_common_name=FAM197Y4;source_gene=ENSG00000274196.6;gene_id=HG00140_ch_G0000189;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y4;gene_sources=liftoff;ID=HG00140_ch_G0000189;Name=FAM197Y4
HG00140_chrY	CAT	transcript	6797328	6799320	1000	+	.	source_transcript=ENST00000622692.2;source_transcript_name=FAM197Y4-201;source_gene=ENSG00000274196.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000274196.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000622692.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000622692.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG00140_ch_T0000648;gene_id=HG00140_ch_G0000189;Parent=HG00140_ch_G0000189;transcript_name=HG00140_ch_T0000648;gene_name=FAM197Y4;ID=HG00140_ch_T0000648;Name=FAM197Y4
HG00140_chrY	CAT	exon	6797328	6797638	.	+	.	source_transcript=ENST00000622692.2;source_transcript_name=FAM197Y4-201;source_gene=ENSG00000274196.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000274196.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000622692.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000622692.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG00140_ch_T0000648;gene_id=HG00140_ch_G0000189;Parent=HG00140_ch_T0000648;transcript_name=HG00140_ch_T0000648;gene_name=FAM197Y4;ID=exon:HG00140_ch_T0000648:0;Name=FAM197Y4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6797639	6799174	.	+	.	source_transcript=ENST00000622692.2;source_transcript_name=FAM197Y4-201;source_gene=ENSG00000274196.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000274196.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000622692.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000622692.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG00140_ch_T0000648;gene_id=HG00140_ch_G0000189;Parent=HG00140_ch_T0000648;transcript_name=HG00140_ch_T0000648;gene_name=FAM197Y4;ID=intron:HG00140_ch_T0000648:0;Name=FAM197Y4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6799175	6799320	.	+	.	source_transcript=ENST00000622692.2;source_transcript_name=FAM197Y4-201;source_gene=ENSG00000274196.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000274196.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000622692.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000622692.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG00140_ch_T0000648;gene_id=HG00140_ch_G0000189;Parent=HG00140_ch_T0000648;transcript_name=HG00140_ch_T0000648;gene_name=FAM197Y4;ID=exon:HG00140_ch_T0000648:1;Name=FAM197Y4;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6798987	6804576	.	+	.	source_gene_common_name=FAM197Y4;source_gene=ENSG00000290373.1;gene_id=HG00140_ch_G0000190;gene_biotype=lncRNA;gene_name=FAM197Y4;gene_sources=liftoff;ID=HG00140_ch_G0000190;Name=FAM197Y4
HG00140_chrY	CAT	transcript	6798987	6804576	1000	+	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG00140_ch_T0000649;gene_id=HG00140_ch_G0000190;Parent=HG00140_ch_G0000190;transcript_name=HG00140_ch_T0000649;gene_name=FAM197Y4;ID=HG00140_ch_T0000649;Name=FAM197Y4
HG00140_chrY	CAT	exon	6798987	6799088	.	+	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG00140_ch_T0000649;gene_id=HG00140_ch_G0000190;Parent=HG00140_ch_T0000649;transcript_name=HG00140_ch_T0000649;gene_name=FAM197Y4;ID=exon:HG00140_ch_T0000649:0;Name=FAM197Y4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6799089	6799174	.	+	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG00140_ch_T0000649;gene_id=HG00140_ch_G0000190;Parent=HG00140_ch_T0000649;transcript_name=HG00140_ch_T0000649;gene_name=FAM197Y4;ID=intron:HG00140_ch_T0000649:0;Name=FAM197Y4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6799175	6799320	.	+	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG00140_ch_T0000649;gene_id=HG00140_ch_G0000190;Parent=HG00140_ch_T0000649;transcript_name=HG00140_ch_T0000649;gene_name=FAM197Y4;ID=exon:HG00140_ch_T0000649:1;Name=FAM197Y4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6799321	6800807	.	+	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG00140_ch_T0000649;gene_id=HG00140_ch_G0000190;Parent=HG00140_ch_T0000649;transcript_name=HG00140_ch_T0000649;gene_name=FAM197Y4;ID=intron:HG00140_ch_T0000649:1;Name=FAM197Y4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6800808	6800966	.	+	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG00140_ch_T0000649;gene_id=HG00140_ch_G0000190;Parent=HG00140_ch_T0000649;transcript_name=HG00140_ch_T0000649;gene_name=FAM197Y4;ID=exon:HG00140_ch_T0000649:2;Name=FAM197Y4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6800967	6804516	.	+	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG00140_ch_T0000649;gene_id=HG00140_ch_G0000190;Parent=HG00140_ch_T0000649;transcript_name=HG00140_ch_T0000649;gene_name=FAM197Y4;ID=intron:HG00140_ch_T0000649:2;Name=FAM197Y4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6804517	6804576	.	+	.	source_transcript=ENST00000616275.4;source_transcript_name=FAM197Y4-202;source_gene=ENSG00000290373.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290373.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000616275.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000616275.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;transcript_id=HG00140_ch_T0000649;gene_id=HG00140_ch_G0000190;Parent=HG00140_ch_T0000649;transcript_name=HG00140_ch_T0000649;gene_name=FAM197Y4;ID=exon:HG00140_ch_T0000649:3;Name=FAM197Y4;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6813844	6816658	.	-	.	source_gene_common_name=TSPY9;source_gene=ENSG00000238074.6;gene_id=HG00140_ch_G0000191;gene_biotype=protein_coding;gene_name=TSPY9;gene_sources=liftoff;ID=HG00140_ch_G0000191;Name=TSPY9
HG00140_chrY	CAT	transcript	6813844	6816658	100	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000650;gene_id=HG00140_ch_G0000191;Parent=HG00140_ch_G0000191;transcript_name=HG00140_ch_T0000650;gene_name=TSPY9;ID=HG00140_ch_T0000650;Name=TSPY9
HG00140_chrY	CAT	exon	6813844	6814054	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000650;gene_id=HG00140_ch_G0000191;Parent=HG00140_ch_T0000650;transcript_name=HG00140_ch_T0000650;gene_name=TSPY9;ID=exon:HG00140_ch_T0000650:0;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6814032	6814054	.	-	2	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000650;gene_id=HG00140_ch_G0000191;Parent=HG00140_ch_T0000650;transcript_name=HG00140_ch_T0000650;gene_name=TSPY9;ID=CDS:HG00140_ch_T0000650:0;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6814032	6814034	.	-	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000650;gene_id=HG00140_ch_G0000191;Parent=HG00140_ch_T0000650;transcript_name=HG00140_ch_T0000650;gene_name=TSPY9;ID=stop_codon:HG00140_ch_T0000650;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6814055	6814748	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000650;gene_id=HG00140_ch_G0000191;Parent=HG00140_ch_T0000650;transcript_name=HG00140_ch_T0000650;gene_name=TSPY9;ID=intron:HG00140_ch_T0000650:0;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6814749	6814830	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000650;gene_id=HG00140_ch_G0000191;Parent=HG00140_ch_T0000650;transcript_name=HG00140_ch_T0000650;gene_name=TSPY9;ID=exon:HG00140_ch_T0000650:1;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6814749	6814830	.	-	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000650;gene_id=HG00140_ch_G0000191;Parent=HG00140_ch_T0000650;transcript_name=HG00140_ch_T0000650;gene_name=TSPY9;ID=CDS:HG00140_ch_T0000650:1;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6814831	6814936	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000650;gene_id=HG00140_ch_G0000191;Parent=HG00140_ch_T0000650;transcript_name=HG00140_ch_T0000650;gene_name=TSPY9;ID=intron:HG00140_ch_T0000650:1;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6814937	6815082	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000650;gene_id=HG00140_ch_G0000191;Parent=HG00140_ch_T0000650;transcript_name=HG00140_ch_T0000650;gene_name=TSPY9;ID=exon:HG00140_ch_T0000650:2;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6814937	6815082	.	-	2	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000650;gene_id=HG00140_ch_G0000191;Parent=HG00140_ch_T0000650;transcript_name=HG00140_ch_T0000650;gene_name=TSPY9;ID=CDS:HG00140_ch_T0000650:2;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6815083	6815183	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000650;gene_id=HG00140_ch_G0000191;Parent=HG00140_ch_T0000650;transcript_name=HG00140_ch_T0000650;gene_name=TSPY9;ID=intron:HG00140_ch_T0000650:2;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6815184	6815295	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000650;gene_id=HG00140_ch_G0000191;Parent=HG00140_ch_T0000650;transcript_name=HG00140_ch_T0000650;gene_name=TSPY9;ID=exon:HG00140_ch_T0000650:3;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6815184	6815295	.	-	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000650;gene_id=HG00140_ch_G0000191;Parent=HG00140_ch_T0000650;transcript_name=HG00140_ch_T0000650;gene_name=TSPY9;ID=CDS:HG00140_ch_T0000650:3;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6815296	6815423	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000650;gene_id=HG00140_ch_G0000191;Parent=HG00140_ch_T0000650;transcript_name=HG00140_ch_T0000650;gene_name=TSPY9;ID=intron:HG00140_ch_T0000650:3;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6815424	6815501	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000650;gene_id=HG00140_ch_G0000191;Parent=HG00140_ch_T0000650;transcript_name=HG00140_ch_T0000650;gene_name=TSPY9;ID=exon:HG00140_ch_T0000650:4;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6815424	6815501	.	-	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000650;gene_id=HG00140_ch_G0000191;Parent=HG00140_ch_T0000650;transcript_name=HG00140_ch_T0000650;gene_name=TSPY9;ID=CDS:HG00140_ch_T0000650:4;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6815502	6816108	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000650;gene_id=HG00140_ch_G0000191;Parent=HG00140_ch_T0000650;transcript_name=HG00140_ch_T0000650;gene_name=TSPY9;ID=intron:HG00140_ch_T0000650:4;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6816109	6816658	.	-	.	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000650;gene_id=HG00140_ch_G0000191;Parent=HG00140_ch_T0000650;transcript_name=HG00140_ch_T0000650;gene_name=TSPY9;ID=exon:HG00140_ch_T0000650:5;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6816109	6816612	.	-	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000650;gene_id=HG00140_ch_G0000191;Parent=HG00140_ch_T0000650;transcript_name=HG00140_ch_T0000650;gene_name=TSPY9;ID=CDS:HG00140_ch_T0000650:5;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6816610	6816612	.	-	0	source_transcript=ENST00000440215.5;source_transcript_name=TSPY9-201;source_gene=ENSG00000238074.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000238074.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440215.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440215.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;transcript_id=HG00140_ch_T0000650;gene_id=HG00140_ch_G0000191;Parent=HG00140_ch_T0000650;transcript_name=HG00140_ch_T0000650;gene_name=TSPY9;ID=start_codon:HG00140_ch_T0000650;Name=TSPY9;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6817612	6819605	.	+	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000225516.8;gene_id=HG00140_ch_G0000192;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG00140_ch_G0000192;Name=FAM197Y5
HG00140_chrY	CAT	transcript	6817612	6819605	1000	+	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000651;gene_id=HG00140_ch_G0000192;Parent=HG00140_ch_G0000192;transcript_name=HG00140_ch_T0000651;gene_name=FAM197Y5;ID=HG00140_ch_T0000651;Name=FAM197Y5
HG00140_chrY	CAT	exon	6817612	6817922	.	+	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000651;gene_id=HG00140_ch_G0000192;Parent=HG00140_ch_T0000651;transcript_name=HG00140_ch_T0000651;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000651:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6817923	6819459	.	+	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000651;gene_id=HG00140_ch_G0000192;Parent=HG00140_ch_T0000651;transcript_name=HG00140_ch_T0000651;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000651:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6819460	6819605	.	+	.	source_transcript=ENST00000423213.4;source_transcript_name=FAM197Y5-201;source_gene=ENSG00000225516.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225516.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423213.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423213.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000651;gene_id=HG00140_ch_G0000192;Parent=HG00140_ch_T0000651;transcript_name=HG00140_ch_T0000651;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000651:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6819260	6825008	.	+	.	source_gene_common_name=FAM197Y5;source_gene=ENSG00000290330.1;gene_id=HG00140_ch_G0000193;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG00140_ch_G0000193;Name=FAM197Y5
HG00140_chrY	CAT	transcript	6819260	6825008	1000	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000652;gene_id=HG00140_ch_G0000193;Parent=HG00140_ch_G0000193;transcript_name=HG00140_ch_T0000652;gene_name=FAM197Y5;ID=HG00140_ch_T0000652;Name=FAM197Y5
HG00140_chrY	CAT	exon	6819260	6819373	.	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000652;gene_id=HG00140_ch_G0000193;Parent=HG00140_ch_T0000652;transcript_name=HG00140_ch_T0000652;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000652:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6819374	6821180	.	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000652;gene_id=HG00140_ch_G0000193;Parent=HG00140_ch_T0000652;transcript_name=HG00140_ch_T0000652;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000652:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6821181	6821266	.	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000652;gene_id=HG00140_ch_G0000193;Parent=HG00140_ch_T0000652;transcript_name=HG00140_ch_T0000652;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000652:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6821267	6824818	.	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000652;gene_id=HG00140_ch_G0000193;Parent=HG00140_ch_T0000652;transcript_name=HG00140_ch_T0000652;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000652:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6824819	6825008	.	+	.	source_transcript=ENST00000615605.1;source_transcript_name=FAM197Y5-202;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000615605.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615605.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000652;gene_id=HG00140_ch_G0000193;Parent=HG00140_ch_T0000652;transcript_name=HG00140_ch_T0000652;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000652:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6819272	6824878	1000	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000653;gene_id=HG00140_ch_G0000193;Parent=HG00140_ch_G0000193;transcript_name=HG00140_ch_T0000653;gene_name=FAM197Y5;ID=HG00140_ch_T0000653;Name=FAM197Y5
HG00140_chrY	CAT	exon	6819272	6819373	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000653;gene_id=HG00140_ch_G0000193;Parent=HG00140_ch_T0000653;transcript_name=HG00140_ch_T0000653;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000653:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6819374	6819459	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000653;gene_id=HG00140_ch_G0000193;Parent=HG00140_ch_T0000653;transcript_name=HG00140_ch_T0000653;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000653:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6819460	6819605	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000653;gene_id=HG00140_ch_G0000193;Parent=HG00140_ch_T0000653;transcript_name=HG00140_ch_T0000653;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000653:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6819606	6821107	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000653;gene_id=HG00140_ch_G0000193;Parent=HG00140_ch_T0000653;transcript_name=HG00140_ch_T0000653;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000653:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6821108	6821266	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000653;gene_id=HG00140_ch_G0000193;Parent=HG00140_ch_T0000653;transcript_name=HG00140_ch_T0000653;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000653:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6821267	6824818	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000653;gene_id=HG00140_ch_G0000193;Parent=HG00140_ch_T0000653;transcript_name=HG00140_ch_T0000653;gene_name=FAM197Y5;ID=intron:HG00140_ch_T0000653:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6824819	6824878	.	+	.	source_transcript=ENST00000619815.4;source_transcript_name=FAM197Y5-203;source_gene=ENSG00000290330.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290330.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000619815.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000619815.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;transcript_id=HG00140_ch_T0000653;gene_id=HG00140_ch_G0000193;Parent=HG00140_ch_T0000653;transcript_name=HG00140_ch_T0000653;gene_name=FAM197Y5;ID=exon:HG00140_ch_T0000653:3;Name=FAM197Y5;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6834189	6836991	.	-	.	source_gene_common_name=TSPY8;source_gene=ENSG00000229549.9;alternative_source_transcripts=ENST00000477879.1;gene_id=HG00140_ch_G0000194;gene_biotype=protein_coding;gene_name=TSPY8;gene_sources=liftoff;ID=HG00140_ch_G0000194;Name=TSPY8
HG00140_chrY	CAT	transcript	6834189	6836945	1000	-	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=299.894;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000477879.1;transcript_id=HG00140_ch_T0000654;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_G0000194;transcript_name=HG00140_ch_T0000654;gene_name=TSPY8;ID=HG00140_ch_T0000654;Name=TSPY8
HG00140_chrY	CAT	exon	6834189	6834972	.	-	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000477879.1;transcript_id=HG00140_ch_T0000654;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000654;transcript_name=HG00140_ch_T0000654;gene_name=TSPY8;ID=exon:HG00140_ch_T0000654:0;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6834973	6835099	.	-	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000477879.1;transcript_id=HG00140_ch_T0000654;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000654;transcript_name=HG00140_ch_T0000654;gene_name=TSPY8;ID=intron:HG00140_ch_T0000654:0;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6835100	6835646	.	-	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000477879.1;transcript_id=HG00140_ch_T0000654;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000654;transcript_name=HG00140_ch_T0000654;gene_name=TSPY8;ID=exon:HG00140_ch_T0000654:1;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6835647	6835774	.	-	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000477879.1;transcript_id=HG00140_ch_T0000654;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000654;transcript_name=HG00140_ch_T0000654;gene_name=TSPY8;ID=intron:HG00140_ch_T0000654:1;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6835775	6835852	.	-	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000477879.1;transcript_id=HG00140_ch_T0000654;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000654;transcript_name=HG00140_ch_T0000654;gene_name=TSPY8;ID=exon:HG00140_ch_T0000654:2;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6835853	6836459	.	-	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000477879.1;transcript_id=HG00140_ch_T0000654;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000654;transcript_name=HG00140_ch_T0000654;gene_name=TSPY8;ID=intron:HG00140_ch_T0000654:2;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6836460	6836945	.	-	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=299.894;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000477879.1;transcript_id=HG00140_ch_T0000654;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000654;transcript_name=HG00140_ch_T0000654;gene_name=TSPY8;ID=exon:HG00140_ch_T0000654:3;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6834195	6836991	100	-	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00140_ch_T0000655;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_G0000194;transcript_name=HG00140_ch_T0000655;gene_name=TSPY8;ID=HG00140_ch_T0000655;Name=TSPY8
HG00140_chrY	CAT	exon	6834195	6834405	.	-	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00140_ch_T0000655;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000655;transcript_name=HG00140_ch_T0000655;gene_name=TSPY8;ID=exon:HG00140_ch_T0000655:0;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6834383	6834405	.	-	2	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00140_ch_T0000655;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000655;transcript_name=HG00140_ch_T0000655;gene_name=TSPY8;ID=CDS:HG00140_ch_T0000655:0;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6834383	6834385	.	-	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00140_ch_T0000655;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000655;transcript_name=HG00140_ch_T0000655;gene_name=TSPY8;ID=stop_codon:HG00140_ch_T0000655;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6834406	6835099	.	-	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00140_ch_T0000655;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000655;transcript_name=HG00140_ch_T0000655;gene_name=TSPY8;ID=intron:HG00140_ch_T0000655:0;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6835100	6835181	.	-	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00140_ch_T0000655;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000655;transcript_name=HG00140_ch_T0000655;gene_name=TSPY8;ID=exon:HG00140_ch_T0000655:1;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6835100	6835181	.	-	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00140_ch_T0000655;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000655;transcript_name=HG00140_ch_T0000655;gene_name=TSPY8;ID=CDS:HG00140_ch_T0000655:1;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6835182	6835287	.	-	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00140_ch_T0000655;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000655;transcript_name=HG00140_ch_T0000655;gene_name=TSPY8;ID=intron:HG00140_ch_T0000655:1;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6835288	6835433	.	-	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00140_ch_T0000655;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000655;transcript_name=HG00140_ch_T0000655;gene_name=TSPY8;ID=exon:HG00140_ch_T0000655:2;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6835288	6835433	.	-	2	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00140_ch_T0000655;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000655;transcript_name=HG00140_ch_T0000655;gene_name=TSPY8;ID=CDS:HG00140_ch_T0000655:2;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6835434	6835534	.	-	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00140_ch_T0000655;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000655;transcript_name=HG00140_ch_T0000655;gene_name=TSPY8;ID=intron:HG00140_ch_T0000655:2;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6835535	6835646	.	-	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00140_ch_T0000655;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000655;transcript_name=HG00140_ch_T0000655;gene_name=TSPY8;ID=exon:HG00140_ch_T0000655:3;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6835535	6835646	.	-	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00140_ch_T0000655;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000655;transcript_name=HG00140_ch_T0000655;gene_name=TSPY8;ID=CDS:HG00140_ch_T0000655:3;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6835647	6835774	.	-	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00140_ch_T0000655;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000655;transcript_name=HG00140_ch_T0000655;gene_name=TSPY8;ID=intron:HG00140_ch_T0000655:3;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6835775	6835852	.	-	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00140_ch_T0000655;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000655;transcript_name=HG00140_ch_T0000655;gene_name=TSPY8;ID=exon:HG00140_ch_T0000655:4;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6835775	6835852	.	-	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00140_ch_T0000655;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000655;transcript_name=HG00140_ch_T0000655;gene_name=TSPY8;ID=CDS:HG00140_ch_T0000655:4;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6835853	6836459	.	-	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00140_ch_T0000655;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000655;transcript_name=HG00140_ch_T0000655;gene_name=TSPY8;ID=intron:HG00140_ch_T0000655:4;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6836460	6836991	.	-	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00140_ch_T0000655;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000655;transcript_name=HG00140_ch_T0000655;gene_name=TSPY8;ID=exon:HG00140_ch_T0000655:5;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6836460	6836945	.	-	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00140_ch_T0000655;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000655;transcript_name=HG00140_ch_T0000655;gene_name=TSPY8;ID=CDS:HG00140_ch_T0000655:5;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6836943	6836945	.	-	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000287721.13;transcript_id=HG00140_ch_T0000655;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000655;transcript_name=HG00140_ch_T0000655;gene_name=TSPY8;ID=start_codon:HG00140_ch_T0000655;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6834196	6836945	100	-	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00140_ch_T0000656;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_G0000194;transcript_name=HG00140_ch_T0000656;gene_name=TSPY8;ID=HG00140_ch_T0000656;Name=TSPY8
HG00140_chrY	CAT	exon	6834196	6834405	.	-	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00140_ch_T0000656;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000656;transcript_name=HG00140_ch_T0000656;gene_name=TSPY8;ID=exon:HG00140_ch_T0000656:0;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6834406	6835099	.	-	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00140_ch_T0000656;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000656;transcript_name=HG00140_ch_T0000656;gene_name=TSPY8;ID=intron:HG00140_ch_T0000656:0;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6835100	6835192	.	-	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00140_ch_T0000656;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000656;transcript_name=HG00140_ch_T0000656;gene_name=TSPY8;ID=exon:HG00140_ch_T0000656:1;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6835130	6835192	.	-	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00140_ch_T0000656;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000656;transcript_name=HG00140_ch_T0000656;gene_name=TSPY8;ID=CDS:HG00140_ch_T0000656:0;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6835130	6835132	.	-	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00140_ch_T0000656;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000656;transcript_name=HG00140_ch_T0000656;gene_name=TSPY8;ID=stop_codon:HG00140_ch_T0000656;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6835193	6835287	.	-	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00140_ch_T0000656;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000656;transcript_name=HG00140_ch_T0000656;gene_name=TSPY8;ID=intron:HG00140_ch_T0000656:1;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6835288	6835433	.	-	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00140_ch_T0000656;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000656;transcript_name=HG00140_ch_T0000656;gene_name=TSPY8;ID=exon:HG00140_ch_T0000656:2;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6835288	6835433	.	-	2	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00140_ch_T0000656;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000656;transcript_name=HG00140_ch_T0000656;gene_name=TSPY8;ID=CDS:HG00140_ch_T0000656:1;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6835434	6835534	.	-	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00140_ch_T0000656;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000656;transcript_name=HG00140_ch_T0000656;gene_name=TSPY8;ID=intron:HG00140_ch_T0000656:2;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6835535	6835646	.	-	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00140_ch_T0000656;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000656;transcript_name=HG00140_ch_T0000656;gene_name=TSPY8;ID=exon:HG00140_ch_T0000656:3;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6835535	6835646	.	-	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00140_ch_T0000656;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000656;transcript_name=HG00140_ch_T0000656;gene_name=TSPY8;ID=CDS:HG00140_ch_T0000656:2;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6835647	6835774	.	-	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00140_ch_T0000656;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000656;transcript_name=HG00140_ch_T0000656;gene_name=TSPY8;ID=intron:HG00140_ch_T0000656:3;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6835775	6835852	.	-	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00140_ch_T0000656;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000656;transcript_name=HG00140_ch_T0000656;gene_name=TSPY8;ID=exon:HG00140_ch_T0000656:4;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6835775	6835852	.	-	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00140_ch_T0000656;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000656;transcript_name=HG00140_ch_T0000656;gene_name=TSPY8;ID=CDS:HG00140_ch_T0000656:3;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6835853	6836459	.	-	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00140_ch_T0000656;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000656;transcript_name=HG00140_ch_T0000656;gene_name=TSPY8;ID=intron:HG00140_ch_T0000656:4;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6836460	6836945	.	-	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00140_ch_T0000656;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000656;transcript_name=HG00140_ch_T0000656;gene_name=TSPY8;ID=exon:HG00140_ch_T0000656:5;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6836460	6836945	.	-	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00140_ch_T0000656;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000656;transcript_name=HG00140_ch_T0000656;gene_name=TSPY8;ID=CDS:HG00140_ch_T0000656:4;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6836943	6836945	.	-	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383000.1;transcript_id=HG00140_ch_T0000656;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000656;transcript_name=HG00140_ch_T0000656;gene_name=TSPY8;ID=start_codon:HG00140_ch_T0000656;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6834196	6836991	100	-	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=HG00140_ch_T0000657;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_G0000194;transcript_name=HG00140_ch_T0000657;gene_name=TSPY8;ID=HG00140_ch_T0000657;Name=TSPY8
HG00140_chrY	CAT	exon	6834196	6834405	.	-	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=HG00140_ch_T0000657;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000657;transcript_name=HG00140_ch_T0000657;gene_name=TSPY8;ID=exon:HG00140_ch_T0000657:0;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6834406	6835099	.	-	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=HG00140_ch_T0000657;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000657;transcript_name=HG00140_ch_T0000657;gene_name=TSPY8;ID=intron:HG00140_ch_T0000657:0;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6835100	6835192	.	-	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=HG00140_ch_T0000657;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000657;transcript_name=HG00140_ch_T0000657;gene_name=TSPY8;ID=exon:HG00140_ch_T0000657:1;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6835130	6835192	.	-	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=HG00140_ch_T0000657;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000657;transcript_name=HG00140_ch_T0000657;gene_name=TSPY8;ID=CDS:HG00140_ch_T0000657:0;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6835130	6835132	.	-	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=HG00140_ch_T0000657;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000657;transcript_name=HG00140_ch_T0000657;gene_name=TSPY8;ID=stop_codon:HG00140_ch_T0000657;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6835193	6835287	.	-	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=HG00140_ch_T0000657;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000657;transcript_name=HG00140_ch_T0000657;gene_name=TSPY8;ID=intron:HG00140_ch_T0000657:1;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6835288	6835433	.	-	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=HG00140_ch_T0000657;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000657;transcript_name=HG00140_ch_T0000657;gene_name=TSPY8;ID=exon:HG00140_ch_T0000657:2;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6835288	6835433	.	-	2	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=HG00140_ch_T0000657;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000657;transcript_name=HG00140_ch_T0000657;gene_name=TSPY8;ID=CDS:HG00140_ch_T0000657:1;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6835434	6835534	.	-	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=HG00140_ch_T0000657;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000657;transcript_name=HG00140_ch_T0000657;gene_name=TSPY8;ID=intron:HG00140_ch_T0000657:2;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6835535	6835646	.	-	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=HG00140_ch_T0000657;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000657;transcript_name=HG00140_ch_T0000657;gene_name=TSPY8;ID=exon:HG00140_ch_T0000657:3;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6835535	6835646	.	-	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=HG00140_ch_T0000657;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000657;transcript_name=HG00140_ch_T0000657;gene_name=TSPY8;ID=CDS:HG00140_ch_T0000657:2;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6835647	6835774	.	-	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=HG00140_ch_T0000657;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000657;transcript_name=HG00140_ch_T0000657;gene_name=TSPY8;ID=intron:HG00140_ch_T0000657:3;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6835775	6835852	.	-	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=HG00140_ch_T0000657;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000657;transcript_name=HG00140_ch_T0000657;gene_name=TSPY8;ID=exon:HG00140_ch_T0000657:4;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6835775	6835852	.	-	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=HG00140_ch_T0000657;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000657;transcript_name=HG00140_ch_T0000657;gene_name=TSPY8;ID=CDS:HG00140_ch_T0000657:3;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6835853	6836459	.	-	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=HG00140_ch_T0000657;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000657;transcript_name=HG00140_ch_T0000657;gene_name=TSPY8;ID=intron:HG00140_ch_T0000657:4;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6836460	6836597	.	-	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=HG00140_ch_T0000657;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000657;transcript_name=HG00140_ch_T0000657;gene_name=TSPY8;ID=exon:HG00140_ch_T0000657:5;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6836460	6836597	.	-	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=HG00140_ch_T0000657;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000657;transcript_name=HG00140_ch_T0000657;gene_name=TSPY8;ID=CDS:HG00140_ch_T0000657:4;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6836598	6836858	.	-	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=HG00140_ch_T0000657;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000657;transcript_name=HG00140_ch_T0000657;gene_name=TSPY8;ID=intron:HG00140_ch_T0000657:5;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6836859	6836991	.	-	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=HG00140_ch_T0000657;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000657;transcript_name=HG00140_ch_T0000657;gene_name=TSPY8;ID=exon:HG00140_ch_T0000657:6;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6836859	6836945	.	-	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=HG00140_ch_T0000657;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000657;transcript_name=HG00140_ch_T0000657;gene_name=TSPY8;ID=CDS:HG00140_ch_T0000657:5;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6836943	6836945	.	-	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383005.8;transcript_id=HG00140_ch_T0000657;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000657;transcript_name=HG00140_ch_T0000657;gene_name=TSPY8;ID=start_codon:HG00140_ch_T0000657;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6834204	6835585	1000	-	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=299.828;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000436159.2;transcript_id=HG00140_ch_T0000658;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_G0000194;transcript_name=HG00140_ch_T0000658;gene_name=TSPY8;ID=HG00140_ch_T0000658;Name=TSPY8
HG00140_chrY	CAT	exon	6834204	6834405	.	-	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000436159.2;transcript_id=HG00140_ch_T0000658;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000658;transcript_name=HG00140_ch_T0000658;gene_name=TSPY8;ID=exon:HG00140_ch_T0000658:0;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6834406	6835099	.	-	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000436159.2;transcript_id=HG00140_ch_T0000658;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000658;transcript_name=HG00140_ch_T0000658;gene_name=TSPY8;ID=intron:HG00140_ch_T0000658:0;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6835100	6835181	.	-	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000436159.2;transcript_id=HG00140_ch_T0000658;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000658;transcript_name=HG00140_ch_T0000658;gene_name=TSPY8;ID=exon:HG00140_ch_T0000658:1;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6835182	6835287	.	-	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000436159.2;transcript_id=HG00140_ch_T0000658;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000658;transcript_name=HG00140_ch_T0000658;gene_name=TSPY8;ID=intron:HG00140_ch_T0000658:1;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6835288	6835585	.	-	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000436159.2;transcript_id=HG00140_ch_T0000658;gene_id=HG00140_ch_G0000194;Parent=HG00140_ch_T0000658;transcript_name=HG00140_ch_T0000658;gene_name=TSPY8;ID=exon:HG00140_ch_T0000658:2;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6837944	6839939	.	+	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000234830.9_4;gene_id=HG00140_ch_G0000195;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG00140_ch_G0000195;Name=FAM197Y9
HG00140_chrY	CAT	transcript	6837944	6839939	1000	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000659;gene_id=HG00140_ch_G0000195;Parent=HG00140_ch_G0000195;transcript_name=HG00140_ch_T0000659;gene_name=FAM197Y9;ID=HG00140_ch_T0000659;Name=FAM197Y9
HG00140_chrY	CAT	exon	6837944	6838253	.	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000659;gene_id=HG00140_ch_G0000195;Parent=HG00140_ch_T0000659;transcript_name=HG00140_ch_T0000659;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000659:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6838254	6839597	.	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000659;gene_id=HG00140_ch_G0000195;Parent=HG00140_ch_T0000659;transcript_name=HG00140_ch_T0000659;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000659:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6839598	6839681	.	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000659;gene_id=HG00140_ch_G0000195;Parent=HG00140_ch_T0000659;transcript_name=HG00140_ch_T0000659;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000659:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6839682	6839793	.	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000659;gene_id=HG00140_ch_G0000195;Parent=HG00140_ch_T0000659;transcript_name=HG00140_ch_T0000659;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000659:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6839794	6839939	.	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9_4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9_4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000659;gene_id=HG00140_ch_G0000195;Parent=HG00140_ch_T0000659;transcript_name=HG00140_ch_T0000659;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000659:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6839588	6847286	.	+	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000290448.1_1;gene_id=HG00140_ch_G0000196;gene_biotype=lncRNA;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG00140_ch_G0000196;Name=FAM197Y9
HG00140_chrY	CAT	transcript	6839588	6847286	1000	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000660;gene_id=HG00140_ch_G0000196;Parent=HG00140_ch_G0000196;transcript_name=HG00140_ch_T0000660;gene_name=FAM197Y9;ID=HG00140_ch_T0000660;Name=FAM197Y9
HG00140_chrY	CAT	exon	6839588	6839707	.	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000660;gene_id=HG00140_ch_G0000196;Parent=HG00140_ch_T0000660;transcript_name=HG00140_ch_T0000660;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000660:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6839708	6841522	.	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000660;gene_id=HG00140_ch_G0000196;Parent=HG00140_ch_T0000660;transcript_name=HG00140_ch_T0000660;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000660:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6841523	6841608	.	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000660;gene_id=HG00140_ch_G0000196;Parent=HG00140_ch_T0000660;transcript_name=HG00140_ch_T0000660;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000660:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6841609	6845158	.	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000660;gene_id=HG00140_ch_G0000196;Parent=HG00140_ch_T0000660;transcript_name=HG00140_ch_T0000660;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000660:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6845159	6847286	.	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000660;gene_id=HG00140_ch_G0000196;Parent=HG00140_ch_T0000660;transcript_name=HG00140_ch_T0000660;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000660:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6839606	6845218	1000	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000661;gene_id=HG00140_ch_G0000196;Parent=HG00140_ch_G0000196;transcript_name=HG00140_ch_T0000661;gene_name=FAM197Y9;ID=HG00140_ch_T0000661;Name=FAM197Y9
HG00140_chrY	CAT	exon	6839606	6839707	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000661;gene_id=HG00140_ch_G0000196;Parent=HG00140_ch_T0000661;transcript_name=HG00140_ch_T0000661;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000661:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6839708	6839793	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000661;gene_id=HG00140_ch_G0000196;Parent=HG00140_ch_T0000661;transcript_name=HG00140_ch_T0000661;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000661:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6839794	6839939	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000661;gene_id=HG00140_ch_G0000196;Parent=HG00140_ch_T0000661;transcript_name=HG00140_ch_T0000661;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000661:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6839940	6841449	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000661;gene_id=HG00140_ch_G0000196;Parent=HG00140_ch_T0000661;transcript_name=HG00140_ch_T0000661;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000661:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6841450	6841608	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000661;gene_id=HG00140_ch_G0000196;Parent=HG00140_ch_T0000661;transcript_name=HG00140_ch_T0000661;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000661:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6841609	6845158	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000661;gene_id=HG00140_ch_G0000196;Parent=HG00140_ch_T0000661;transcript_name=HG00140_ch_T0000661;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000661:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6845159	6845218	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000661;gene_id=HG00140_ch_G0000196;Parent=HG00140_ch_T0000661;transcript_name=HG00140_ch_T0000661;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000661:3;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6854501	6857303	.	-	.	source_gene_common_name=TSPY8;source_gene=ENSG00000229549.9;alternative_source_transcripts=ENST00000466036.1,ENST00000466036.1;gene_id=HG00140_ch_G0000197;gene_biotype=protein_coding;gene_name=TSPY8;gene_sources=liftoff;ID=HG00140_ch_G0000197;Name=TSPY8
HG00140_chrY	CAT	transcript	6854501	6857257	1000	-	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000466036.1,ENST00000466036.1;transcript_id=HG00140_ch_T0000662;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_G0000197;transcript_name=HG00140_ch_T0000662;gene_name=TSPY8;ID=HG00140_ch_T0000662;Name=TSPY8
HG00140_chrY	CAT	exon	6854501	6855284	.	-	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000466036.1,ENST00000466036.1;transcript_id=HG00140_ch_T0000662;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000662;transcript_name=HG00140_ch_T0000662;gene_name=TSPY8;ID=exon:HG00140_ch_T0000662:0;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6855285	6855411	.	-	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000466036.1,ENST00000466036.1;transcript_id=HG00140_ch_T0000662;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000662;transcript_name=HG00140_ch_T0000662;gene_name=TSPY8;ID=intron:HG00140_ch_T0000662:0;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6855412	6855958	.	-	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000466036.1,ENST00000466036.1;transcript_id=HG00140_ch_T0000662;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000662;transcript_name=HG00140_ch_T0000662;gene_name=TSPY8;ID=exon:HG00140_ch_T0000662:1;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6855959	6856086	.	-	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000466036.1,ENST00000466036.1;transcript_id=HG00140_ch_T0000662;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000662;transcript_name=HG00140_ch_T0000662;gene_name=TSPY8;ID=intron:HG00140_ch_T0000662:1;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6856087	6856164	.	-	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000466036.1,ENST00000466036.1;transcript_id=HG00140_ch_T0000662;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000662;transcript_name=HG00140_ch_T0000662;gene_name=TSPY8;ID=exon:HG00140_ch_T0000662:2;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6856165	6856771	.	-	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000466036.1,ENST00000466036.1;transcript_id=HG00140_ch_T0000662;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000662;transcript_name=HG00140_ch_T0000662;gene_name=TSPY8;ID=intron:HG00140_ch_T0000662:2;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6856772	6857257	.	-	.	source_transcript=ENST00000477879.1;source_transcript_name=TSPY8-205;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000477879.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000477879.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000466036.1,ENST00000466036.1;transcript_id=HG00140_ch_T0000662;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000662;transcript_name=HG00140_ch_T0000662;gene_name=TSPY8;ID=exon:HG00140_ch_T0000662:3;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6854507	6857303	100	-	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=HG00140_ch_T0000663;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_G0000197;transcript_name=HG00140_ch_T0000663;gene_name=TSPY8;ID=HG00140_ch_T0000663;Name=TSPY8
HG00140_chrY	CAT	exon	6854507	6854717	.	-	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=HG00140_ch_T0000663;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000663;transcript_name=HG00140_ch_T0000663;gene_name=TSPY8;ID=exon:HG00140_ch_T0000663:0;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6854695	6854717	.	-	2	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=HG00140_ch_T0000663;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000663;transcript_name=HG00140_ch_T0000663;gene_name=TSPY8;ID=CDS:HG00140_ch_T0000663:0;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6854695	6854697	.	-	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=HG00140_ch_T0000663;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000663;transcript_name=HG00140_ch_T0000663;gene_name=TSPY8;ID=stop_codon:HG00140_ch_T0000663;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6854718	6855411	.	-	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=HG00140_ch_T0000663;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000663;transcript_name=HG00140_ch_T0000663;gene_name=TSPY8;ID=intron:HG00140_ch_T0000663:0;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6855412	6855493	.	-	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=HG00140_ch_T0000663;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000663;transcript_name=HG00140_ch_T0000663;gene_name=TSPY8;ID=exon:HG00140_ch_T0000663:1;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6855412	6855493	.	-	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=HG00140_ch_T0000663;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000663;transcript_name=HG00140_ch_T0000663;gene_name=TSPY8;ID=CDS:HG00140_ch_T0000663:1;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6855494	6855599	.	-	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=HG00140_ch_T0000663;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000663;transcript_name=HG00140_ch_T0000663;gene_name=TSPY8;ID=intron:HG00140_ch_T0000663:1;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6855600	6855745	.	-	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=HG00140_ch_T0000663;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000663;transcript_name=HG00140_ch_T0000663;gene_name=TSPY8;ID=exon:HG00140_ch_T0000663:2;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6855600	6855745	.	-	2	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=HG00140_ch_T0000663;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000663;transcript_name=HG00140_ch_T0000663;gene_name=TSPY8;ID=CDS:HG00140_ch_T0000663:2;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6855746	6855846	.	-	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=HG00140_ch_T0000663;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000663;transcript_name=HG00140_ch_T0000663;gene_name=TSPY8;ID=intron:HG00140_ch_T0000663:2;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6855847	6855958	.	-	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=HG00140_ch_T0000663;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000663;transcript_name=HG00140_ch_T0000663;gene_name=TSPY8;ID=exon:HG00140_ch_T0000663:3;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6855847	6855958	.	-	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=HG00140_ch_T0000663;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000663;transcript_name=HG00140_ch_T0000663;gene_name=TSPY8;ID=CDS:HG00140_ch_T0000663:3;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6855959	6856086	.	-	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=HG00140_ch_T0000663;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000663;transcript_name=HG00140_ch_T0000663;gene_name=TSPY8;ID=intron:HG00140_ch_T0000663:3;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6856087	6856164	.	-	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=HG00140_ch_T0000663;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000663;transcript_name=HG00140_ch_T0000663;gene_name=TSPY8;ID=exon:HG00140_ch_T0000663:4;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6856087	6856164	.	-	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=HG00140_ch_T0000663;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000663;transcript_name=HG00140_ch_T0000663;gene_name=TSPY8;ID=CDS:HG00140_ch_T0000663:4;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6856165	6856771	.	-	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=HG00140_ch_T0000663;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000663;transcript_name=HG00140_ch_T0000663;gene_name=TSPY8;ID=intron:HG00140_ch_T0000663:4;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6856772	6857303	.	-	.	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=HG00140_ch_T0000663;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000663;transcript_name=HG00140_ch_T0000663;gene_name=TSPY8;ID=exon:HG00140_ch_T0000663:5;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6856772	6857257	.	-	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=HG00140_ch_T0000663;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000663;transcript_name=HG00140_ch_T0000663;gene_name=TSPY8;ID=CDS:HG00140_ch_T0000663:5;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6857255	6857257	.	-	0	source_transcript=ENST00000287721.13;source_transcript_name=TSPY8-201;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000287721.13;alignment_mode=liftoff;normalized_transcript_id=ENST00000287721.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000426950.6,ENST00000426950.6;transcript_id=HG00140_ch_T0000663;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000663;transcript_name=HG00140_ch_T0000663;gene_name=TSPY8;ID=start_codon:HG00140_ch_T0000663;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6854508	6857257	100	-	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=HG00140_ch_T0000664;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_G0000197;transcript_name=HG00140_ch_T0000664;gene_name=TSPY8;ID=HG00140_ch_T0000664;Name=TSPY8
HG00140_chrY	CAT	exon	6854508	6854717	.	-	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=HG00140_ch_T0000664;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000664;transcript_name=HG00140_ch_T0000664;gene_name=TSPY8;ID=exon:HG00140_ch_T0000664:0;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6854718	6855411	.	-	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=HG00140_ch_T0000664;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000664;transcript_name=HG00140_ch_T0000664;gene_name=TSPY8;ID=intron:HG00140_ch_T0000664:0;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6855412	6855504	.	-	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=HG00140_ch_T0000664;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000664;transcript_name=HG00140_ch_T0000664;gene_name=TSPY8;ID=exon:HG00140_ch_T0000664:1;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6855442	6855504	.	-	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=HG00140_ch_T0000664;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000664;transcript_name=HG00140_ch_T0000664;gene_name=TSPY8;ID=CDS:HG00140_ch_T0000664:0;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6855442	6855444	.	-	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=HG00140_ch_T0000664;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000664;transcript_name=HG00140_ch_T0000664;gene_name=TSPY8;ID=stop_codon:HG00140_ch_T0000664;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6855505	6855599	.	-	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=HG00140_ch_T0000664;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000664;transcript_name=HG00140_ch_T0000664;gene_name=TSPY8;ID=intron:HG00140_ch_T0000664:1;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6855600	6855745	.	-	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=HG00140_ch_T0000664;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000664;transcript_name=HG00140_ch_T0000664;gene_name=TSPY8;ID=exon:HG00140_ch_T0000664:2;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6855600	6855745	.	-	2	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=HG00140_ch_T0000664;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000664;transcript_name=HG00140_ch_T0000664;gene_name=TSPY8;ID=CDS:HG00140_ch_T0000664:1;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6855746	6855846	.	-	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=HG00140_ch_T0000664;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000664;transcript_name=HG00140_ch_T0000664;gene_name=TSPY8;ID=intron:HG00140_ch_T0000664:2;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6855847	6855958	.	-	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=HG00140_ch_T0000664;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000664;transcript_name=HG00140_ch_T0000664;gene_name=TSPY8;ID=exon:HG00140_ch_T0000664:3;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6855847	6855958	.	-	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=HG00140_ch_T0000664;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000664;transcript_name=HG00140_ch_T0000664;gene_name=TSPY8;ID=CDS:HG00140_ch_T0000664:2;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6855959	6856086	.	-	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=HG00140_ch_T0000664;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000664;transcript_name=HG00140_ch_T0000664;gene_name=TSPY8;ID=intron:HG00140_ch_T0000664:3;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6856087	6856164	.	-	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=HG00140_ch_T0000664;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000664;transcript_name=HG00140_ch_T0000664;gene_name=TSPY8;ID=exon:HG00140_ch_T0000664:4;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6856087	6856164	.	-	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=HG00140_ch_T0000664;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000664;transcript_name=HG00140_ch_T0000664;gene_name=TSPY8;ID=CDS:HG00140_ch_T0000664:3;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6856165	6856771	.	-	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=HG00140_ch_T0000664;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000664;transcript_name=HG00140_ch_T0000664;gene_name=TSPY8;ID=intron:HG00140_ch_T0000664:4;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6856772	6857257	.	-	.	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=HG00140_ch_T0000664;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000664;transcript_name=HG00140_ch_T0000664;gene_name=TSPY8;ID=exon:HG00140_ch_T0000664:5;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6856772	6857257	.	-	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=HG00140_ch_T0000664;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000664;transcript_name=HG00140_ch_T0000664;gene_name=TSPY8;ID=CDS:HG00140_ch_T0000664:4;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6857255	6857257	.	-	0	source_transcript=ENST00000383000.1;source_transcript_name=TSPY8-202;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383000.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=ENST00000383008.1,ENST00000383008.1;transcript_id=HG00140_ch_T0000664;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000664;transcript_name=HG00140_ch_T0000664;gene_name=TSPY8;ID=start_codon:HG00140_ch_T0000664;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6854508	6857303	100	-	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00140_ch_T0000665;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_G0000197;transcript_name=HG00140_ch_T0000665;gene_name=TSPY8;ID=HG00140_ch_T0000665;Name=TSPY8
HG00140_chrY	CAT	exon	6854508	6854717	.	-	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00140_ch_T0000665;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000665;transcript_name=HG00140_ch_T0000665;gene_name=TSPY8;ID=exon:HG00140_ch_T0000665:0;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6854718	6855411	.	-	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00140_ch_T0000665;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000665;transcript_name=HG00140_ch_T0000665;gene_name=TSPY8;ID=intron:HG00140_ch_T0000665:0;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6855412	6855504	.	-	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00140_ch_T0000665;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000665;transcript_name=HG00140_ch_T0000665;gene_name=TSPY8;ID=exon:HG00140_ch_T0000665:1;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6855442	6855504	.	-	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00140_ch_T0000665;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000665;transcript_name=HG00140_ch_T0000665;gene_name=TSPY8;ID=CDS:HG00140_ch_T0000665:0;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	6855442	6855444	.	-	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00140_ch_T0000665;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000665;transcript_name=HG00140_ch_T0000665;gene_name=TSPY8;ID=stop_codon:HG00140_ch_T0000665;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6855505	6855599	.	-	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00140_ch_T0000665;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000665;transcript_name=HG00140_ch_T0000665;gene_name=TSPY8;ID=intron:HG00140_ch_T0000665:1;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6855600	6855745	.	-	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00140_ch_T0000665;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000665;transcript_name=HG00140_ch_T0000665;gene_name=TSPY8;ID=exon:HG00140_ch_T0000665:2;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6855600	6855745	.	-	2	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00140_ch_T0000665;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000665;transcript_name=HG00140_ch_T0000665;gene_name=TSPY8;ID=CDS:HG00140_ch_T0000665:1;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6855746	6855846	.	-	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00140_ch_T0000665;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000665;transcript_name=HG00140_ch_T0000665;gene_name=TSPY8;ID=intron:HG00140_ch_T0000665:2;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6855847	6855958	.	-	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00140_ch_T0000665;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000665;transcript_name=HG00140_ch_T0000665;gene_name=TSPY8;ID=exon:HG00140_ch_T0000665:3;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6855847	6855958	.	-	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00140_ch_T0000665;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000665;transcript_name=HG00140_ch_T0000665;gene_name=TSPY8;ID=CDS:HG00140_ch_T0000665:2;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6855959	6856086	.	-	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00140_ch_T0000665;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000665;transcript_name=HG00140_ch_T0000665;gene_name=TSPY8;ID=intron:HG00140_ch_T0000665:3;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6856087	6856164	.	-	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00140_ch_T0000665;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000665;transcript_name=HG00140_ch_T0000665;gene_name=TSPY8;ID=exon:HG00140_ch_T0000665:4;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6856087	6856164	.	-	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00140_ch_T0000665;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000665;transcript_name=HG00140_ch_T0000665;gene_name=TSPY8;ID=CDS:HG00140_ch_T0000665:3;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6856165	6856771	.	-	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00140_ch_T0000665;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000665;transcript_name=HG00140_ch_T0000665;gene_name=TSPY8;ID=intron:HG00140_ch_T0000665:4;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6856772	6856909	.	-	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00140_ch_T0000665;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000665;transcript_name=HG00140_ch_T0000665;gene_name=TSPY8;ID=exon:HG00140_ch_T0000665:5;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6856772	6856909	.	-	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00140_ch_T0000665;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000665;transcript_name=HG00140_ch_T0000665;gene_name=TSPY8;ID=CDS:HG00140_ch_T0000665:4;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6856910	6857170	.	-	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00140_ch_T0000665;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000665;transcript_name=HG00140_ch_T0000665;gene_name=TSPY8;ID=intron:HG00140_ch_T0000665:5;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6857171	6857303	.	-	.	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00140_ch_T0000665;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000665;transcript_name=HG00140_ch_T0000665;gene_name=TSPY8;ID=exon:HG00140_ch_T0000665:6;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	6857171	6857257	.	-	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00140_ch_T0000665;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000665;transcript_name=HG00140_ch_T0000665;gene_name=TSPY8;ID=CDS:HG00140_ch_T0000665:5;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	6857255	6857257	.	-	0	source_transcript=ENST00000383005.8;source_transcript_name=TSPY8-203;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383005.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000383005.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00140_ch_T0000665;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000665;transcript_name=HG00140_ch_T0000665;gene_name=TSPY8;ID=start_codon:HG00140_ch_T0000665;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6854516	6855897	1000	-	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00140_ch_T0000666;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_G0000197;transcript_name=HG00140_ch_T0000666;gene_name=TSPY8;ID=HG00140_ch_T0000666;Name=TSPY8
HG00140_chrY	CAT	exon	6854516	6854717	.	-	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00140_ch_T0000666;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000666;transcript_name=HG00140_ch_T0000666;gene_name=TSPY8;ID=exon:HG00140_ch_T0000666:0;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6854718	6855411	.	-	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00140_ch_T0000666;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000666;transcript_name=HG00140_ch_T0000666;gene_name=TSPY8;ID=intron:HG00140_ch_T0000666:0;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6855412	6855493	.	-	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00140_ch_T0000666;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000666;transcript_name=HG00140_ch_T0000666;gene_name=TSPY8;ID=exon:HG00140_ch_T0000666:1;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6855494	6855599	.	-	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00140_ch_T0000666;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000666;transcript_name=HG00140_ch_T0000666;gene_name=TSPY8;ID=intron:HG00140_ch_T0000666:1;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6855600	6855897	.	-	.	source_transcript=ENST00000436159.2;source_transcript_name=TSPY8-204;source_gene=ENSG00000229549.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000229549.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000436159.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000436159.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;transcript_id=HG00140_ch_T0000666;gene_id=HG00140_ch_G0000197;Parent=HG00140_ch_T0000666;transcript_name=HG00140_ch_T0000666;gene_name=TSPY8;ID=exon:HG00140_ch_T0000666:2;Name=TSPY8;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6859935	6864887	.	+	.	source_gene_common_name=TTTY20;source_gene=ENSG00000232808.1;alternative_source_transcripts=ENST00000434487.1,ENST00000434487.1;gene_id=HG00140_ch_G0000198;gene_biotype=lncRNA;gene_name=TTTY20;gene_sources=liftoff;ID=HG00140_ch_G0000198;Name=TTTY20
HG00140_chrY	CAT	transcript	6859935	6864887	1000	+	.	source_transcript=ENST00000434487.1;source_transcript_name=TTTY20-201;source_gene=ENSG00000232808.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000232808.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434487.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434487.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=ENST00000434487.1,ENST00000434487.1;transcript_id=HG00140_ch_T0000667;gene_id=HG00140_ch_G0000198;Parent=HG00140_ch_G0000198;transcript_name=HG00140_ch_T0000667;gene_name=TTTY20;ID=HG00140_ch_T0000667;Name=TTTY20
HG00140_chrY	CAT	exon	6859935	6860016	.	+	.	source_transcript=ENST00000434487.1;source_transcript_name=TTTY20-201;source_gene=ENSG00000232808.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000232808.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434487.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434487.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=ENST00000434487.1,ENST00000434487.1;transcript_id=HG00140_ch_T0000667;gene_id=HG00140_ch_G0000198;Parent=HG00140_ch_T0000667;transcript_name=HG00140_ch_T0000667;gene_name=TTTY20;ID=exon:HG00140_ch_T0000667:0;Name=TTTY20;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6860017	6864710	.	+	.	source_transcript=ENST00000434487.1;source_transcript_name=TTTY20-201;source_gene=ENSG00000232808.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000232808.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434487.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434487.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=ENST00000434487.1,ENST00000434487.1;transcript_id=HG00140_ch_T0000667;gene_id=HG00140_ch_G0000198;Parent=HG00140_ch_T0000667;transcript_name=HG00140_ch_T0000667;gene_name=TTTY20;ID=intron:HG00140_ch_T0000667:0;Name=TTTY20;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6864711	6864887	.	+	.	source_transcript=ENST00000434487.1;source_transcript_name=TTTY20-201;source_gene=ENSG00000232808.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000232808.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434487.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434487.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=ENST00000434487.1,ENST00000434487.1;transcript_id=HG00140_ch_T0000667;gene_id=HG00140_ch_G0000198;Parent=HG00140_ch_T0000667;transcript_name=HG00140_ch_T0000667;gene_name=TTTY20;ID=exon:HG00140_ch_T0000667:1;Name=TTTY20;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6868720	6868968	.	-	.	source_gene_common_name=ENSG00000275310;source_gene=ENSG00000275310.1;alternative_source_transcripts=ENST00000610661.1,ENST00000610661.1;gene_id=HG00140_ch_G0000199;gene_biotype=processed_pseudogene;gene_name=ENSG00000275310;gene_sources=liftoff;ID=HG00140_ch_G0000199;Name=ENSG00000275310
HG00140_chrY	CAT	transcript	6868720	6868968	1000	-	.	source_transcript=ENST00000610661.1;source_transcript_name=ENST00000610661;source_gene=ENSG00000275310.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000275310.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000610661.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000610661.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275310;alternative_source_transcripts=ENST00000610661.1,ENST00000610661.1;transcript_id=HG00140_ch_T0000668;gene_id=HG00140_ch_G0000199;Parent=HG00140_ch_G0000199;transcript_name=HG00140_ch_T0000668;gene_name=ENSG00000275310;ID=HG00140_ch_T0000668;Name=ENSG00000275310
HG00140_chrY	CAT	exon	6868720	6868968	.	-	.	source_transcript=ENST00000610661.1;source_transcript_name=ENST00000610661;source_gene=ENSG00000275310.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000275310.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000610661.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000610661.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275310;alternative_source_transcripts=ENST00000610661.1,ENST00000610661.1;transcript_id=HG00140_ch_T0000668;gene_id=HG00140_ch_G0000199;Parent=HG00140_ch_T0000668;transcript_name=HG00140_ch_T0000668;gene_name=ENSG00000275310;ID=exon:HG00140_ch_T0000668:0;Name=ENSG00000275310;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6869884	6886150	.	+	.	source_gene_common_name=ENSG00000299768;source_gene=ENSG00000299768.1;gene_id=HG00140_ch_G0000200;gene_biotype=lncRNA;gene_name=ENSG00000299768;gene_sources=liftoff;ID=HG00140_ch_G0000200;Name=ENSG00000299768
HG00140_chrY	CAT	transcript	6869884	6886150	1000	+	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000669;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_G0000200;transcript_name=HG00140_ch_T0000669;gene_name=ENSG00000299768;ID=HG00140_ch_T0000669;Name=ENSG00000299768
HG00140_chrY	CAT	exon	6869884	6870038	.	+	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000669;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000669;transcript_name=HG00140_ch_T0000669;gene_name=ENSG00000299768;ID=exon:HG00140_ch_T0000669:0;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6870039	6871893	.	+	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000669;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000669;transcript_name=HG00140_ch_T0000669;gene_name=ENSG00000299768;ID=intron:HG00140_ch_T0000669:0;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6871894	6872006	.	+	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000669;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000669;transcript_name=HG00140_ch_T0000669;gene_name=ENSG00000299768;ID=exon:HG00140_ch_T0000669:1;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6872007	6872478	.	+	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000669;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000669;transcript_name=HG00140_ch_T0000669;gene_name=ENSG00000299768;ID=intron:HG00140_ch_T0000669:1;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6872479	6872582	.	+	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000669;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000669;transcript_name=HG00140_ch_T0000669;gene_name=ENSG00000299768;ID=exon:HG00140_ch_T0000669:2;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6872583	6875597	.	+	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000669;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000669;transcript_name=HG00140_ch_T0000669;gene_name=ENSG00000299768;ID=intron:HG00140_ch_T0000669:2;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6875598	6875775	.	+	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000669;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000669;transcript_name=HG00140_ch_T0000669;gene_name=ENSG00000299768;ID=exon:HG00140_ch_T0000669:3;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6875776	6877675	.	+	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000669;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000669;transcript_name=HG00140_ch_T0000669;gene_name=ENSG00000299768;ID=intron:HG00140_ch_T0000669:3;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6877676	6877828	.	+	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000669;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000669;transcript_name=HG00140_ch_T0000669;gene_name=ENSG00000299768;ID=exon:HG00140_ch_T0000669:4;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6877829	6879876	.	+	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000669;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000669;transcript_name=HG00140_ch_T0000669;gene_name=ENSG00000299768;ID=intron:HG00140_ch_T0000669:4;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6879877	6879991	.	+	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000669;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000669;transcript_name=HG00140_ch_T0000669;gene_name=ENSG00000299768;ID=exon:HG00140_ch_T0000669:5;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6879992	6880946	.	+	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000669;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000669;transcript_name=HG00140_ch_T0000669;gene_name=ENSG00000299768;ID=intron:HG00140_ch_T0000669:5;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6880947	6881057	.	+	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000669;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000669;transcript_name=HG00140_ch_T0000669;gene_name=ENSG00000299768;ID=exon:HG00140_ch_T0000669:6;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6881058	6882836	.	+	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000669;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000669;transcript_name=HG00140_ch_T0000669;gene_name=ENSG00000299768;ID=intron:HG00140_ch_T0000669:6;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6882837	6882925	.	+	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000669;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000669;transcript_name=HG00140_ch_T0000669;gene_name=ENSG00000299768;ID=exon:HG00140_ch_T0000669:7;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6882926	6885932	.	+	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000669;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000669;transcript_name=HG00140_ch_T0000669;gene_name=ENSG00000299768;ID=intron:HG00140_ch_T0000669:7;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6885933	6886150	.	+	.	source_transcript=ENST00000766240.1;source_transcript_name=ENST00000766240;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766240.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766240.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000669;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000669;transcript_name=HG00140_ch_T0000669;gene_name=ENSG00000299768;ID=exon:HG00140_ch_T0000669:8;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6869901	6876513	1000	+	.	source_transcript=ENST00000766245.1;source_transcript_name=ENST00000766245;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766245.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000670;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_G0000200;transcript_name=HG00140_ch_T0000670;gene_name=ENSG00000299768;ID=HG00140_ch_T0000670;Name=ENSG00000299768
HG00140_chrY	CAT	exon	6869901	6870038	.	+	.	source_transcript=ENST00000766245.1;source_transcript_name=ENST00000766245;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000670;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000670;transcript_name=HG00140_ch_T0000670;gene_name=ENSG00000299768;ID=exon:HG00140_ch_T0000670:0;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6870039	6871893	.	+	.	source_transcript=ENST00000766245.1;source_transcript_name=ENST00000766245;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000670;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000670;transcript_name=HG00140_ch_T0000670;gene_name=ENSG00000299768;ID=intron:HG00140_ch_T0000670:0;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6871894	6872006	.	+	.	source_transcript=ENST00000766245.1;source_transcript_name=ENST00000766245;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000670;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000670;transcript_name=HG00140_ch_T0000670;gene_name=ENSG00000299768;ID=exon:HG00140_ch_T0000670:1;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6872007	6872478	.	+	.	source_transcript=ENST00000766245.1;source_transcript_name=ENST00000766245;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000670;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000670;transcript_name=HG00140_ch_T0000670;gene_name=ENSG00000299768;ID=intron:HG00140_ch_T0000670:1;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6872479	6872582	.	+	.	source_transcript=ENST00000766245.1;source_transcript_name=ENST00000766245;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000670;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000670;transcript_name=HG00140_ch_T0000670;gene_name=ENSG00000299768;ID=exon:HG00140_ch_T0000670:2;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6872583	6875597	.	+	.	source_transcript=ENST00000766245.1;source_transcript_name=ENST00000766245;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000670;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000670;transcript_name=HG00140_ch_T0000670;gene_name=ENSG00000299768;ID=intron:HG00140_ch_T0000670:2;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6875598	6876513	.	+	.	source_transcript=ENST00000766245.1;source_transcript_name=ENST00000766245;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766245.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000670;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000670;transcript_name=HG00140_ch_T0000670;gene_name=ENSG00000299768;ID=exon:HG00140_ch_T0000670:3;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6869901	6881306	1000	+	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000671;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_G0000200;transcript_name=HG00140_ch_T0000671;gene_name=ENSG00000299768;ID=HG00140_ch_T0000671;Name=ENSG00000299768
HG00140_chrY	CAT	exon	6869901	6870038	.	+	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000671;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000671;transcript_name=HG00140_ch_T0000671;gene_name=ENSG00000299768;ID=exon:HG00140_ch_T0000671:0;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6870039	6871893	.	+	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000671;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000671;transcript_name=HG00140_ch_T0000671;gene_name=ENSG00000299768;ID=intron:HG00140_ch_T0000671:0;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6871894	6872006	.	+	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000671;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000671;transcript_name=HG00140_ch_T0000671;gene_name=ENSG00000299768;ID=exon:HG00140_ch_T0000671:1;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6872007	6872478	.	+	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000671;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000671;transcript_name=HG00140_ch_T0000671;gene_name=ENSG00000299768;ID=intron:HG00140_ch_T0000671:1;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6872479	6872582	.	+	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000671;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000671;transcript_name=HG00140_ch_T0000671;gene_name=ENSG00000299768;ID=exon:HG00140_ch_T0000671:2;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6872583	6875597	.	+	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000671;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000671;transcript_name=HG00140_ch_T0000671;gene_name=ENSG00000299768;ID=intron:HG00140_ch_T0000671:2;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6875598	6875775	.	+	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000671;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000671;transcript_name=HG00140_ch_T0000671;gene_name=ENSG00000299768;ID=exon:HG00140_ch_T0000671:3;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6875776	6877675	.	+	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000671;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000671;transcript_name=HG00140_ch_T0000671;gene_name=ENSG00000299768;ID=intron:HG00140_ch_T0000671:3;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6877676	6877828	.	+	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000671;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000671;transcript_name=HG00140_ch_T0000671;gene_name=ENSG00000299768;ID=exon:HG00140_ch_T0000671:4;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6877829	6879876	.	+	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000671;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000671;transcript_name=HG00140_ch_T0000671;gene_name=ENSG00000299768;ID=intron:HG00140_ch_T0000671:4;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6879877	6881306	.	+	.	source_transcript=ENST00000766244.1;source_transcript_name=ENST00000766244;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766244.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766244.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000671;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000671;transcript_name=HG00140_ch_T0000671;gene_name=ENSG00000299768;ID=exon:HG00140_ch_T0000671:5;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6869926	6886148	1000	+	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000672;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_G0000200;transcript_name=HG00140_ch_T0000672;gene_name=ENSG00000299768;ID=HG00140_ch_T0000672;Name=ENSG00000299768
HG00140_chrY	CAT	exon	6869926	6870038	.	+	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000672;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000672;transcript_name=HG00140_ch_T0000672;gene_name=ENSG00000299768;ID=exon:HG00140_ch_T0000672:0;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6870039	6871893	.	+	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000672;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000672;transcript_name=HG00140_ch_T0000672;gene_name=ENSG00000299768;ID=intron:HG00140_ch_T0000672:0;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6871894	6872006	.	+	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000672;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000672;transcript_name=HG00140_ch_T0000672;gene_name=ENSG00000299768;ID=exon:HG00140_ch_T0000672:1;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6872007	6872478	.	+	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000672;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000672;transcript_name=HG00140_ch_T0000672;gene_name=ENSG00000299768;ID=intron:HG00140_ch_T0000672:1;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6872479	6872582	.	+	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000672;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000672;transcript_name=HG00140_ch_T0000672;gene_name=ENSG00000299768;ID=exon:HG00140_ch_T0000672:2;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6872583	6875597	.	+	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000672;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000672;transcript_name=HG00140_ch_T0000672;gene_name=ENSG00000299768;ID=intron:HG00140_ch_T0000672:2;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6875598	6875775	.	+	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000672;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000672;transcript_name=HG00140_ch_T0000672;gene_name=ENSG00000299768;ID=exon:HG00140_ch_T0000672:3;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6875776	6877675	.	+	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000672;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000672;transcript_name=HG00140_ch_T0000672;gene_name=ENSG00000299768;ID=intron:HG00140_ch_T0000672:3;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6877676	6877828	.	+	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000672;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000672;transcript_name=HG00140_ch_T0000672;gene_name=ENSG00000299768;ID=exon:HG00140_ch_T0000672:4;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6877829	6880946	.	+	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000672;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000672;transcript_name=HG00140_ch_T0000672;gene_name=ENSG00000299768;ID=intron:HG00140_ch_T0000672:4;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6880947	6881057	.	+	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000672;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000672;transcript_name=HG00140_ch_T0000672;gene_name=ENSG00000299768;ID=exon:HG00140_ch_T0000672:5;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6881058	6882836	.	+	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000672;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000672;transcript_name=HG00140_ch_T0000672;gene_name=ENSG00000299768;ID=intron:HG00140_ch_T0000672:5;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6882837	6882925	.	+	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000672;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000672;transcript_name=HG00140_ch_T0000672;gene_name=ENSG00000299768;ID=exon:HG00140_ch_T0000672:6;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6882926	6885932	.	+	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000672;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000672;transcript_name=HG00140_ch_T0000672;gene_name=ENSG00000299768;ID=intron:HG00140_ch_T0000672:6;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6885933	6886148	.	+	.	source_transcript=ENST00000766241.1;source_transcript_name=ENST00000766241;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766241.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766241.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000672;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000672;transcript_name=HG00140_ch_T0000672;gene_name=ENSG00000299768;ID=exon:HG00140_ch_T0000672:7;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6869926	6886148	1000	+	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000673;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_G0000200;transcript_name=HG00140_ch_T0000673;gene_name=ENSG00000299768;ID=HG00140_ch_T0000673;Name=ENSG00000299768
HG00140_chrY	CAT	exon	6869926	6870038	.	+	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000673;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000673;transcript_name=HG00140_ch_T0000673;gene_name=ENSG00000299768;ID=exon:HG00140_ch_T0000673:0;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6870039	6871893	.	+	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000673;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000673;transcript_name=HG00140_ch_T0000673;gene_name=ENSG00000299768;ID=intron:HG00140_ch_T0000673:0;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6871894	6872006	.	+	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000673;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000673;transcript_name=HG00140_ch_T0000673;gene_name=ENSG00000299768;ID=exon:HG00140_ch_T0000673:1;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6872007	6872478	.	+	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000673;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000673;transcript_name=HG00140_ch_T0000673;gene_name=ENSG00000299768;ID=intron:HG00140_ch_T0000673:1;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6872479	6872582	.	+	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000673;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000673;transcript_name=HG00140_ch_T0000673;gene_name=ENSG00000299768;ID=exon:HG00140_ch_T0000673:2;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6872583	6875597	.	+	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000673;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000673;transcript_name=HG00140_ch_T0000673;gene_name=ENSG00000299768;ID=intron:HG00140_ch_T0000673:2;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6875598	6875775	.	+	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000673;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000673;transcript_name=HG00140_ch_T0000673;gene_name=ENSG00000299768;ID=exon:HG00140_ch_T0000673:3;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6875776	6877675	.	+	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000673;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000673;transcript_name=HG00140_ch_T0000673;gene_name=ENSG00000299768;ID=intron:HG00140_ch_T0000673:3;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6877676	6877828	.	+	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000673;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000673;transcript_name=HG00140_ch_T0000673;gene_name=ENSG00000299768;ID=exon:HG00140_ch_T0000673:4;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6877829	6879876	.	+	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000673;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000673;transcript_name=HG00140_ch_T0000673;gene_name=ENSG00000299768;ID=intron:HG00140_ch_T0000673:4;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6879877	6879991	.	+	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000673;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000673;transcript_name=HG00140_ch_T0000673;gene_name=ENSG00000299768;ID=exon:HG00140_ch_T0000673:5;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6879992	6880946	.	+	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000673;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000673;transcript_name=HG00140_ch_T0000673;gene_name=ENSG00000299768;ID=intron:HG00140_ch_T0000673:5;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6880947	6881057	.	+	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000673;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000673;transcript_name=HG00140_ch_T0000673;gene_name=ENSG00000299768;ID=exon:HG00140_ch_T0000673:6;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6881058	6882640	.	+	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000673;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000673;transcript_name=HG00140_ch_T0000673;gene_name=ENSG00000299768;ID=intron:HG00140_ch_T0000673:6;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6882641	6882751	.	+	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000673;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000673;transcript_name=HG00140_ch_T0000673;gene_name=ENSG00000299768;ID=exon:HG00140_ch_T0000673:7;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6882752	6882836	.	+	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000673;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000673;transcript_name=HG00140_ch_T0000673;gene_name=ENSG00000299768;ID=intron:HG00140_ch_T0000673:7;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6882837	6882925	.	+	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000673;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000673;transcript_name=HG00140_ch_T0000673;gene_name=ENSG00000299768;ID=exon:HG00140_ch_T0000673:8;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6882926	6885932	.	+	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000673;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000673;transcript_name=HG00140_ch_T0000673;gene_name=ENSG00000299768;ID=intron:HG00140_ch_T0000673:8;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6885933	6886148	.	+	.	source_transcript=ENST00000766242.1;source_transcript_name=ENST00000766242;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766242.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000673;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000673;transcript_name=HG00140_ch_T0000673;gene_name=ENSG00000299768;ID=exon:HG00140_ch_T0000673:9;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6869927	6873094	1000	+	.	source_transcript=ENST00000766246.1;source_transcript_name=ENST00000766246;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766246.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766246.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000674;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_G0000200;transcript_name=HG00140_ch_T0000674;gene_name=ENSG00000299768;ID=HG00140_ch_T0000674;Name=ENSG00000299768
HG00140_chrY	CAT	exon	6869927	6870038	.	+	.	source_transcript=ENST00000766246.1;source_transcript_name=ENST00000766246;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766246.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000674;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000674;transcript_name=HG00140_ch_T0000674;gene_name=ENSG00000299768;ID=exon:HG00140_ch_T0000674:0;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6870039	6871893	.	+	.	source_transcript=ENST00000766246.1;source_transcript_name=ENST00000766246;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766246.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000674;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000674;transcript_name=HG00140_ch_T0000674;gene_name=ENSG00000299768;ID=intron:HG00140_ch_T0000674:0;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6871894	6872006	.	+	.	source_transcript=ENST00000766246.1;source_transcript_name=ENST00000766246;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766246.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000674;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000674;transcript_name=HG00140_ch_T0000674;gene_name=ENSG00000299768;ID=exon:HG00140_ch_T0000674:1;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6872007	6872478	.	+	.	source_transcript=ENST00000766246.1;source_transcript_name=ENST00000766246;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766246.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000674;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000674;transcript_name=HG00140_ch_T0000674;gene_name=ENSG00000299768;ID=intron:HG00140_ch_T0000674:1;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6872479	6873094	.	+	.	source_transcript=ENST00000766246.1;source_transcript_name=ENST00000766246;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766246.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000674;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000674;transcript_name=HG00140_ch_T0000674;gene_name=ENSG00000299768;ID=exon:HG00140_ch_T0000674:2;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	6869964	6886148	1000	+	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000675;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_G0000200;transcript_name=HG00140_ch_T0000675;gene_name=ENSG00000299768;ID=HG00140_ch_T0000675;Name=ENSG00000299768
HG00140_chrY	CAT	exon	6869964	6870092	.	+	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000675;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000675;transcript_name=HG00140_ch_T0000675;gene_name=ENSG00000299768;ID=exon:HG00140_ch_T0000675:0;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6870093	6871893	.	+	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000675;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000675;transcript_name=HG00140_ch_T0000675;gene_name=ENSG00000299768;ID=intron:HG00140_ch_T0000675:0;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6871894	6872006	.	+	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000675;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000675;transcript_name=HG00140_ch_T0000675;gene_name=ENSG00000299768;ID=exon:HG00140_ch_T0000675:1;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6872007	6872478	.	+	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000675;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000675;transcript_name=HG00140_ch_T0000675;gene_name=ENSG00000299768;ID=intron:HG00140_ch_T0000675:1;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6872479	6872582	.	+	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000675;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000675;transcript_name=HG00140_ch_T0000675;gene_name=ENSG00000299768;ID=exon:HG00140_ch_T0000675:2;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6872583	6875597	.	+	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000675;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000675;transcript_name=HG00140_ch_T0000675;gene_name=ENSG00000299768;ID=intron:HG00140_ch_T0000675:2;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6875598	6875775	.	+	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000675;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000675;transcript_name=HG00140_ch_T0000675;gene_name=ENSG00000299768;ID=exon:HG00140_ch_T0000675:3;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6875776	6877675	.	+	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000675;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000675;transcript_name=HG00140_ch_T0000675;gene_name=ENSG00000299768;ID=intron:HG00140_ch_T0000675:3;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6877676	6877828	.	+	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000675;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000675;transcript_name=HG00140_ch_T0000675;gene_name=ENSG00000299768;ID=exon:HG00140_ch_T0000675:4;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6877829	6879876	.	+	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000675;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000675;transcript_name=HG00140_ch_T0000675;gene_name=ENSG00000299768;ID=intron:HG00140_ch_T0000675:4;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6879877	6879991	.	+	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000675;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000675;transcript_name=HG00140_ch_T0000675;gene_name=ENSG00000299768;ID=exon:HG00140_ch_T0000675:5;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6879992	6880946	.	+	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000675;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000675;transcript_name=HG00140_ch_T0000675;gene_name=ENSG00000299768;ID=intron:HG00140_ch_T0000675:5;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6880947	6881057	.	+	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000675;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000675;transcript_name=HG00140_ch_T0000675;gene_name=ENSG00000299768;ID=exon:HG00140_ch_T0000675:6;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6881058	6882640	.	+	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000675;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000675;transcript_name=HG00140_ch_T0000675;gene_name=ENSG00000299768;ID=intron:HG00140_ch_T0000675:6;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6882641	6882751	.	+	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000675;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000675;transcript_name=HG00140_ch_T0000675;gene_name=ENSG00000299768;ID=exon:HG00140_ch_T0000675:7;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6882752	6882836	.	+	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000675;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000675;transcript_name=HG00140_ch_T0000675;gene_name=ENSG00000299768;ID=intron:HG00140_ch_T0000675:7;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6882837	6882925	.	+	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000675;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000675;transcript_name=HG00140_ch_T0000675;gene_name=ENSG00000299768;ID=exon:HG00140_ch_T0000675:8;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6882926	6885932	.	+	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000675;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000675;transcript_name=HG00140_ch_T0000675;gene_name=ENSG00000299768;ID=intron:HG00140_ch_T0000675:8;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6885933	6886148	.	+	.	source_transcript=ENST00000766243.1;source_transcript_name=ENST00000766243;source_gene=ENSG00000299768.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299768.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766243.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299768;transcript_id=HG00140_ch_T0000675;gene_id=HG00140_ch_G0000200;Parent=HG00140_ch_T0000675;transcript_name=HG00140_ch_T0000675;gene_name=ENSG00000299768;ID=exon:HG00140_ch_T0000675:9;Name=ENSG00000299768;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6871898	6883637	.	+	.	source_gene_common_name=RBMY1A3P;source_gene=ENSG00000197038.6;gene_id=HG00140_ch_G0000201;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY1A3P;gene_sources=liftoff;ID=HG00140_ch_G0000201;Name=RBMY1A3P
HG00140_chrY	CAT	transcript	6871898	6883637	1000	+	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG00140_ch_T0000676;gene_id=HG00140_ch_G0000201;Parent=HG00140_ch_G0000201;transcript_name=HG00140_ch_T0000676;gene_name=RBMY1A3P;ID=HG00140_ch_T0000676;Name=RBMY1A3P
HG00140_chrY	CAT	exon	6871898	6872006	.	+	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG00140_ch_T0000676;gene_id=HG00140_ch_G0000201;Parent=HG00140_ch_T0000676;transcript_name=HG00140_ch_T0000676;gene_name=RBMY1A3P;ID=exon:HG00140_ch_T0000676:0;Name=RBMY1A3P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6872007	6872478	.	+	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG00140_ch_T0000676;gene_id=HG00140_ch_G0000201;Parent=HG00140_ch_T0000676;transcript_name=HG00140_ch_T0000676;gene_name=RBMY1A3P;ID=intron:HG00140_ch_T0000676:0;Name=RBMY1A3P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6872479	6872582	.	+	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG00140_ch_T0000676;gene_id=HG00140_ch_G0000201;Parent=HG00140_ch_T0000676;transcript_name=HG00140_ch_T0000676;gene_name=RBMY1A3P;ID=exon:HG00140_ch_T0000676:1;Name=RBMY1A3P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6872583	6875597	.	+	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG00140_ch_T0000676;gene_id=HG00140_ch_G0000201;Parent=HG00140_ch_T0000676;transcript_name=HG00140_ch_T0000676;gene_name=RBMY1A3P;ID=intron:HG00140_ch_T0000676:1;Name=RBMY1A3P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6875598	6875775	.	+	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG00140_ch_T0000676;gene_id=HG00140_ch_G0000201;Parent=HG00140_ch_T0000676;transcript_name=HG00140_ch_T0000676;gene_name=RBMY1A3P;ID=exon:HG00140_ch_T0000676:2;Name=RBMY1A3P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6875776	6877675	.	+	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG00140_ch_T0000676;gene_id=HG00140_ch_G0000201;Parent=HG00140_ch_T0000676;transcript_name=HG00140_ch_T0000676;gene_name=RBMY1A3P;ID=intron:HG00140_ch_T0000676:2;Name=RBMY1A3P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6877676	6877828	.	+	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG00140_ch_T0000676;gene_id=HG00140_ch_G0000201;Parent=HG00140_ch_T0000676;transcript_name=HG00140_ch_T0000676;gene_name=RBMY1A3P;ID=exon:HG00140_ch_T0000676:3;Name=RBMY1A3P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6877829	6879876	.	+	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG00140_ch_T0000676;gene_id=HG00140_ch_G0000201;Parent=HG00140_ch_T0000676;transcript_name=HG00140_ch_T0000676;gene_name=RBMY1A3P;ID=intron:HG00140_ch_T0000676:3;Name=RBMY1A3P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6879877	6879991	.	+	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG00140_ch_T0000676;gene_id=HG00140_ch_G0000201;Parent=HG00140_ch_T0000676;transcript_name=HG00140_ch_T0000676;gene_name=RBMY1A3P;ID=exon:HG00140_ch_T0000676:4;Name=RBMY1A3P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6879992	6880946	.	+	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG00140_ch_T0000676;gene_id=HG00140_ch_G0000201;Parent=HG00140_ch_T0000676;transcript_name=HG00140_ch_T0000676;gene_name=RBMY1A3P;ID=intron:HG00140_ch_T0000676:4;Name=RBMY1A3P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6880947	6881057	.	+	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG00140_ch_T0000676;gene_id=HG00140_ch_G0000201;Parent=HG00140_ch_T0000676;transcript_name=HG00140_ch_T0000676;gene_name=RBMY1A3P;ID=exon:HG00140_ch_T0000676:5;Name=RBMY1A3P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6881058	6881484	.	+	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG00140_ch_T0000676;gene_id=HG00140_ch_G0000201;Parent=HG00140_ch_T0000676;transcript_name=HG00140_ch_T0000676;gene_name=RBMY1A3P;ID=intron:HG00140_ch_T0000676:5;Name=RBMY1A3P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6881485	6881594	.	+	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG00140_ch_T0000676;gene_id=HG00140_ch_G0000201;Parent=HG00140_ch_T0000676;transcript_name=HG00140_ch_T0000676;gene_name=RBMY1A3P;ID=exon:HG00140_ch_T0000676:6;Name=RBMY1A3P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6881595	6882031	.	+	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG00140_ch_T0000676;gene_id=HG00140_ch_G0000201;Parent=HG00140_ch_T0000676;transcript_name=HG00140_ch_T0000676;gene_name=RBMY1A3P;ID=intron:HG00140_ch_T0000676:6;Name=RBMY1A3P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6882032	6882142	.	+	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG00140_ch_T0000676;gene_id=HG00140_ch_G0000201;Parent=HG00140_ch_T0000676;transcript_name=HG00140_ch_T0000676;gene_name=RBMY1A3P;ID=exon:HG00140_ch_T0000676:7;Name=RBMY1A3P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6882143	6882640	.	+	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG00140_ch_T0000676;gene_id=HG00140_ch_G0000201;Parent=HG00140_ch_T0000676;transcript_name=HG00140_ch_T0000676;gene_name=RBMY1A3P;ID=intron:HG00140_ch_T0000676:7;Name=RBMY1A3P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6882641	6882751	.	+	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG00140_ch_T0000676;gene_id=HG00140_ch_G0000201;Parent=HG00140_ch_T0000676;transcript_name=HG00140_ch_T0000676;gene_name=RBMY1A3P;ID=exon:HG00140_ch_T0000676:8;Name=RBMY1A3P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6882752	6883335	.	+	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG00140_ch_T0000676;gene_id=HG00140_ch_G0000201;Parent=HG00140_ch_T0000676;transcript_name=HG00140_ch_T0000676;gene_name=RBMY1A3P;ID=intron:HG00140_ch_T0000676:8;Name=RBMY1A3P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6883336	6883637	.	+	.	source_transcript=ENST00000382670.3;source_transcript_name=RBMY1A3P-201;source_gene=ENSG00000197038.6;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197038.6;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382670.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382670.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;transcript_id=HG00140_ch_T0000676;gene_id=HG00140_ch_G0000201;Parent=HG00140_ch_T0000676;transcript_name=HG00140_ch_T0000676;gene_name=RBMY1A3P;ID=exon:HG00140_ch_T0000676:9;Name=RBMY1A3P;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6883255	6902525	.	-	.	source_gene_common_name=ENSG00000299745;source_gene=ENSG00000299745.1;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;gene_id=HG00140_ch_G0000202;gene_biotype=lncRNA;gene_name=ENSG00000299745;gene_sources=liftoff;ID=HG00140_ch_G0000202;Name=ENSG00000299745
HG00140_chrY	CAT	transcript	6883255	6902525	1000	-	.	source_transcript=ENST00000766005.1;source_transcript_name=ENST00000766005;source_gene=ENSG00000299745.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299745.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766005.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299745;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;transcript_id=HG00140_ch_T0000677;gene_id=HG00140_ch_G0000202;Parent=HG00140_ch_G0000202;transcript_name=HG00140_ch_T0000677;gene_name=ENSG00000299745;ID=HG00140_ch_T0000677;Name=ENSG00000299745
HG00140_chrY	CAT	exon	6883255	6883621	.	-	.	source_transcript=ENST00000766005.1;source_transcript_name=ENST00000766005;source_gene=ENSG00000299745.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299745.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766005.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299745;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;transcript_id=HG00140_ch_T0000677;gene_id=HG00140_ch_G0000202;Parent=HG00140_ch_T0000677;transcript_name=HG00140_ch_T0000677;gene_name=ENSG00000299745;ID=exon:HG00140_ch_T0000677:0;Name=ENSG00000299745;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6883622	6886354	.	-	.	source_transcript=ENST00000766005.1;source_transcript_name=ENST00000766005;source_gene=ENSG00000299745.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299745.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766005.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299745;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;transcript_id=HG00140_ch_T0000677;gene_id=HG00140_ch_G0000202;Parent=HG00140_ch_T0000677;transcript_name=HG00140_ch_T0000677;gene_name=ENSG00000299745;ID=intron:HG00140_ch_T0000677:0;Name=ENSG00000299745;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6886355	6886522	.	-	.	source_transcript=ENST00000766005.1;source_transcript_name=ENST00000766005;source_gene=ENSG00000299745.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299745.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766005.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299745;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;transcript_id=HG00140_ch_T0000677;gene_id=HG00140_ch_G0000202;Parent=HG00140_ch_T0000677;transcript_name=HG00140_ch_T0000677;gene_name=ENSG00000299745;ID=exon:HG00140_ch_T0000677:1;Name=ENSG00000299745;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6886523	6890111	.	-	.	source_transcript=ENST00000766005.1;source_transcript_name=ENST00000766005;source_gene=ENSG00000299745.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299745.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766005.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299745;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;transcript_id=HG00140_ch_T0000677;gene_id=HG00140_ch_G0000202;Parent=HG00140_ch_T0000677;transcript_name=HG00140_ch_T0000677;gene_name=ENSG00000299745;ID=intron:HG00140_ch_T0000677:1;Name=ENSG00000299745;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6890112	6890224	.	-	.	source_transcript=ENST00000766005.1;source_transcript_name=ENST00000766005;source_gene=ENSG00000299745.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299745.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766005.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299745;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;transcript_id=HG00140_ch_T0000677;gene_id=HG00140_ch_G0000202;Parent=HG00140_ch_T0000677;transcript_name=HG00140_ch_T0000677;gene_name=ENSG00000299745;ID=exon:HG00140_ch_T0000677:2;Name=ENSG00000299745;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6890225	6900892	.	-	.	source_transcript=ENST00000766005.1;source_transcript_name=ENST00000766005;source_gene=ENSG00000299745.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299745.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766005.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299745;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;transcript_id=HG00140_ch_T0000677;gene_id=HG00140_ch_G0000202;Parent=HG00140_ch_T0000677;transcript_name=HG00140_ch_T0000677;gene_name=ENSG00000299745;ID=intron:HG00140_ch_T0000677:2;Name=ENSG00000299745;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6900893	6900967	.	-	.	source_transcript=ENST00000766005.1;source_transcript_name=ENST00000766005;source_gene=ENSG00000299745.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299745.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766005.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299745;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;transcript_id=HG00140_ch_T0000677;gene_id=HG00140_ch_G0000202;Parent=HG00140_ch_T0000677;transcript_name=HG00140_ch_T0000677;gene_name=ENSG00000299745;ID=exon:HG00140_ch_T0000677:3;Name=ENSG00000299745;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6900968	6902212	.	-	.	source_transcript=ENST00000766005.1;source_transcript_name=ENST00000766005;source_gene=ENSG00000299745.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299745.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766005.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299745;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;transcript_id=HG00140_ch_T0000677;gene_id=HG00140_ch_G0000202;Parent=HG00140_ch_T0000677;transcript_name=HG00140_ch_T0000677;gene_name=ENSG00000299745;ID=intron:HG00140_ch_T0000677:3;Name=ENSG00000299745;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6902213	6902525	.	-	.	source_transcript=ENST00000766005.1;source_transcript_name=ENST00000766005;source_gene=ENSG00000299745.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299745.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766005.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299745;alternative_source_transcripts=ENST00000766005.1,ENST00000766005.1;transcript_id=HG00140_ch_T0000677;gene_id=HG00140_ch_G0000202;Parent=HG00140_ch_T0000677;transcript_name=HG00140_ch_T0000677;gene_name=ENSG00000299745;ID=exon:HG00140_ch_T0000677:4;Name=ENSG00000299745;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6963527	6963859	.	-	.	source_gene_common_name=ELOCP4;source_gene=ENSG00000232924.1;alternative_source_transcripts=ENST00000420090.1,ENST00000420090.1;gene_id=HG00140_ch_G0000203;gene_biotype=processed_pseudogene;gene_name=ELOCP4;gene_sources=liftoff;ID=HG00140_ch_G0000203;Name=ELOCP4
HG00140_chrY	CAT	transcript	6963527	6963859	1000	-	.	source_transcript=ENST00000420090.1;source_transcript_name=ELOCP4-201;source_gene=ENSG00000232924.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232924.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420090.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP4;alternative_source_transcripts=ENST00000420090.1,ENST00000420090.1;transcript_id=HG00140_ch_T0000678;gene_id=HG00140_ch_G0000203;Parent=HG00140_ch_G0000203;transcript_name=HG00140_ch_T0000678;gene_name=ELOCP4;ID=HG00140_ch_T0000678;Name=ELOCP4
HG00140_chrY	CAT	exon	6963527	6963859	.	-	.	source_transcript=ENST00000420090.1;source_transcript_name=ELOCP4-201;source_gene=ENSG00000232924.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232924.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420090.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP4;alternative_source_transcripts=ENST00000420090.1,ENST00000420090.1;transcript_id=HG00140_ch_T0000678;gene_id=HG00140_ch_G0000203;Parent=HG00140_ch_T0000678;transcript_name=HG00140_ch_T0000678;gene_name=ELOCP4;ID=exon:HG00140_ch_T0000678:0;Name=ELOCP4;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	6990170	7005137	.	+	.	source_gene_common_name=USP9YP4;source_gene=ENSG00000238154.1;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;gene_id=HG00140_ch_G0000204;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP4;gene_sources=liftoff;ID=HG00140_ch_G0000204;Name=USP9YP4
HG00140_chrY	CAT	transcript	6990170	7005137	1000	+	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=299.943;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=HG00140_ch_T0000679;gene_id=HG00140_ch_G0000204;Parent=HG00140_ch_G0000204;transcript_name=HG00140_ch_T0000679;gene_name=USP9YP4;ID=HG00140_ch_T0000679;Name=USP9YP4
HG00140_chrY	CAT	exon	6990170	6990384	.	+	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=299.943;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=HG00140_ch_T0000679;gene_id=HG00140_ch_G0000204;Parent=HG00140_ch_T0000679;transcript_name=HG00140_ch_T0000679;gene_name=USP9YP4;ID=exon:HG00140_ch_T0000679:0;Name=USP9YP4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6990385	6993185	.	+	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=299.943;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=HG00140_ch_T0000679;gene_id=HG00140_ch_G0000204;Parent=HG00140_ch_T0000679;transcript_name=HG00140_ch_T0000679;gene_name=USP9YP4;ID=intron:HG00140_ch_T0000679:0;Name=USP9YP4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6993186	6993392	.	+	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=299.943;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=HG00140_ch_T0000679;gene_id=HG00140_ch_G0000204;Parent=HG00140_ch_T0000679;transcript_name=HG00140_ch_T0000679;gene_name=USP9YP4;ID=exon:HG00140_ch_T0000679:1;Name=USP9YP4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6993393	6995504	.	+	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=299.943;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=HG00140_ch_T0000679;gene_id=HG00140_ch_G0000204;Parent=HG00140_ch_T0000679;transcript_name=HG00140_ch_T0000679;gene_name=USP9YP4;ID=intron:HG00140_ch_T0000679:1;Name=USP9YP4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	6995505	6995694	.	+	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=299.943;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=HG00140_ch_T0000679;gene_id=HG00140_ch_G0000204;Parent=HG00140_ch_T0000679;transcript_name=HG00140_ch_T0000679;gene_name=USP9YP4;ID=exon:HG00140_ch_T0000679:2;Name=USP9YP4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	6995695	7001070	.	+	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=299.943;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=HG00140_ch_T0000679;gene_id=HG00140_ch_G0000204;Parent=HG00140_ch_T0000679;transcript_name=HG00140_ch_T0000679;gene_name=USP9YP4;ID=intron:HG00140_ch_T0000679:2;Name=USP9YP4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7001071	7001194	.	+	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=299.943;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=HG00140_ch_T0000679;gene_id=HG00140_ch_G0000204;Parent=HG00140_ch_T0000679;transcript_name=HG00140_ch_T0000679;gene_name=USP9YP4;ID=exon:HG00140_ch_T0000679:3;Name=USP9YP4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7001195	7003693	.	+	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=299.943;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=HG00140_ch_T0000679;gene_id=HG00140_ch_G0000204;Parent=HG00140_ch_T0000679;transcript_name=HG00140_ch_T0000679;gene_name=USP9YP4;ID=intron:HG00140_ch_T0000679:3;Name=USP9YP4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7003694	7004578	.	+	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=299.943;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=HG00140_ch_T0000679;gene_id=HG00140_ch_G0000204;Parent=HG00140_ch_T0000679;transcript_name=HG00140_ch_T0000679;gene_name=USP9YP4;ID=exon:HG00140_ch_T0000679:4;Name=USP9YP4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7004579	7005013	.	+	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=299.943;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=HG00140_ch_T0000679;gene_id=HG00140_ch_G0000204;Parent=HG00140_ch_T0000679;transcript_name=HG00140_ch_T0000679;gene_name=USP9YP4;ID=intron:HG00140_ch_T0000679:4;Name=USP9YP4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7005014	7005137	.	+	.	source_transcript=ENST00000424401.1;source_transcript_name=USP9YP4-201;source_gene=ENSG00000238154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424401.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424401.1;transcript_score=299.943;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP4;alternative_source_transcripts=ENST00000424401.1,ENST00000424401.1;transcript_id=HG00140_ch_T0000679;gene_id=HG00140_ch_G0000204;Parent=HG00140_ch_T0000679;transcript_name=HG00140_ch_T0000679;gene_name=USP9YP4;ID=exon:HG00140_ch_T0000679:5;Name=USP9YP4;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	7008963	7011072	.	-	.	source_gene_common_name=USP9YP22;source_gene=ENSG00000224408.1;alternative_source_transcripts=ENST00000438971.1,ENST00000438971.1;gene_id=HG00140_ch_G0000205;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP22;gene_sources=liftoff;ID=HG00140_ch_G0000205;Name=USP9YP22
HG00140_chrY	CAT	transcript	7008963	7011072	1000	-	.	source_transcript=ENST00000438971.1;source_transcript_name=USP9YP22-201;source_gene=ENSG00000224408.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224408.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000438971.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438971.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP22;alternative_source_transcripts=ENST00000438971.1,ENST00000438971.1;transcript_id=HG00140_ch_T0000680;gene_id=HG00140_ch_G0000205;Parent=HG00140_ch_G0000205;transcript_name=HG00140_ch_T0000680;gene_name=USP9YP22;ID=HG00140_ch_T0000680;Name=USP9YP22
HG00140_chrY	CAT	exon	7008963	7009164	.	-	.	source_transcript=ENST00000438971.1;source_transcript_name=USP9YP22-201;source_gene=ENSG00000224408.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224408.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000438971.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438971.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP22;alternative_source_transcripts=ENST00000438971.1,ENST00000438971.1;transcript_id=HG00140_ch_T0000680;gene_id=HG00140_ch_G0000205;Parent=HG00140_ch_T0000680;transcript_name=HG00140_ch_T0000680;gene_name=USP9YP22;ID=exon:HG00140_ch_T0000680:0;Name=USP9YP22;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7009165	7010980	.	-	.	source_transcript=ENST00000438971.1;source_transcript_name=USP9YP22-201;source_gene=ENSG00000224408.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224408.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000438971.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438971.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP22;alternative_source_transcripts=ENST00000438971.1,ENST00000438971.1;transcript_id=HG00140_ch_T0000680;gene_id=HG00140_ch_G0000205;Parent=HG00140_ch_T0000680;transcript_name=HG00140_ch_T0000680;gene_name=USP9YP22;ID=intron:HG00140_ch_T0000680:0;Name=USP9YP22;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7010981	7011072	.	-	.	source_transcript=ENST00000438971.1;source_transcript_name=USP9YP22-201;source_gene=ENSG00000224408.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224408.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000438971.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438971.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP22;alternative_source_transcripts=ENST00000438971.1,ENST00000438971.1;transcript_id=HG00140_ch_T0000680;gene_id=HG00140_ch_G0000205;Parent=HG00140_ch_T0000680;transcript_name=HG00140_ch_T0000680;gene_name=USP9YP22;ID=exon:HG00140_ch_T0000680:1;Name=USP9YP22;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	7027064	7028681	.	+	.	source_gene_common_name=CDY3P;source_gene=ENSG00000232235.1;alternative_source_transcripts=ENST00000454543.1,ENST00000454543.1;gene_id=HG00140_ch_G0000206;gene_biotype=processed_pseudogene;gene_name=CDY3P;gene_sources=liftoff;ID=HG00140_ch_G0000206;Name=CDY3P
HG00140_chrY	CAT	transcript	7027064	7028681	1000	+	.	source_transcript=ENST00000454543.1;source_transcript_name=CDY3P-201;source_gene=ENSG00000232235.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232235.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000454543.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454543.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY3P;alternative_source_transcripts=ENST00000454543.1,ENST00000454543.1;transcript_id=HG00140_ch_T0000681;gene_id=HG00140_ch_G0000206;Parent=HG00140_ch_G0000206;transcript_name=HG00140_ch_T0000681;gene_name=CDY3P;ID=HG00140_ch_T0000681;Name=CDY3P
HG00140_chrY	CAT	exon	7027064	7028681	.	+	.	source_transcript=ENST00000454543.1;source_transcript_name=CDY3P-201;source_gene=ENSG00000232235.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232235.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000454543.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454543.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY3P;alternative_source_transcripts=ENST00000454543.1,ENST00000454543.1;transcript_id=HG00140_ch_T0000681;gene_id=HG00140_ch_G0000206;Parent=HG00140_ch_T0000681;transcript_name=HG00140_ch_T0000681;gene_name=CDY3P;ID=exon:HG00140_ch_T0000681:0;Name=CDY3P;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	7104817	7114225	.	-	.	source_gene_common_name=OFD1P3Y;source_gene=ENSG00000231988.1;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;gene_id=HG00140_ch_G0000207;gene_biotype=unprocessed_pseudogene;gene_name=OFD1P3Y;gene_sources=liftoff;ID=HG00140_ch_G0000207;Name=OFD1P3Y
HG00140_chrY	CAT	transcript	7104817	7114225	1000	-	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=HG00140_ch_T0000682;gene_id=HG00140_ch_G0000207;Parent=HG00140_ch_G0000207;transcript_name=HG00140_ch_T0000682;gene_name=OFD1P3Y;ID=HG00140_ch_T0000682;Name=OFD1P3Y
HG00140_chrY	CAT	exon	7104817	7105005	.	-	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=HG00140_ch_T0000682;gene_id=HG00140_ch_G0000207;Parent=HG00140_ch_T0000682;transcript_name=HG00140_ch_T0000682;gene_name=OFD1P3Y;ID=exon:HG00140_ch_T0000682:0;Name=OFD1P3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7105006	7107039	.	-	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=HG00140_ch_T0000682;gene_id=HG00140_ch_G0000207;Parent=HG00140_ch_T0000682;transcript_name=HG00140_ch_T0000682;gene_name=OFD1P3Y;ID=intron:HG00140_ch_T0000682:0;Name=OFD1P3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7107040	7107131	.	-	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=HG00140_ch_T0000682;gene_id=HG00140_ch_G0000207;Parent=HG00140_ch_T0000682;transcript_name=HG00140_ch_T0000682;gene_name=OFD1P3Y;ID=exon:HG00140_ch_T0000682:1;Name=OFD1P3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7107132	7108276	.	-	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=HG00140_ch_T0000682;gene_id=HG00140_ch_G0000207;Parent=HG00140_ch_T0000682;transcript_name=HG00140_ch_T0000682;gene_name=OFD1P3Y;ID=intron:HG00140_ch_T0000682:1;Name=OFD1P3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7108277	7108350	.	-	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=HG00140_ch_T0000682;gene_id=HG00140_ch_G0000207;Parent=HG00140_ch_T0000682;transcript_name=HG00140_ch_T0000682;gene_name=OFD1P3Y;ID=exon:HG00140_ch_T0000682:2;Name=OFD1P3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7108351	7110018	.	-	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=HG00140_ch_T0000682;gene_id=HG00140_ch_G0000207;Parent=HG00140_ch_T0000682;transcript_name=HG00140_ch_T0000682;gene_name=OFD1P3Y;ID=intron:HG00140_ch_T0000682:2;Name=OFD1P3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7110019	7110134	.	-	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=HG00140_ch_T0000682;gene_id=HG00140_ch_G0000207;Parent=HG00140_ch_T0000682;transcript_name=HG00140_ch_T0000682;gene_name=OFD1P3Y;ID=exon:HG00140_ch_T0000682:3;Name=OFD1P3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7110135	7113589	.	-	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=HG00140_ch_T0000682;gene_id=HG00140_ch_G0000207;Parent=HG00140_ch_T0000682;transcript_name=HG00140_ch_T0000682;gene_name=OFD1P3Y;ID=intron:HG00140_ch_T0000682:3;Name=OFD1P3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7113590	7113764	.	-	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=HG00140_ch_T0000682;gene_id=HG00140_ch_G0000207;Parent=HG00140_ch_T0000682;transcript_name=HG00140_ch_T0000682;gene_name=OFD1P3Y;ID=exon:HG00140_ch_T0000682:4;Name=OFD1P3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7113765	7114088	.	-	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=HG00140_ch_T0000682;gene_id=HG00140_ch_G0000207;Parent=HG00140_ch_T0000682;transcript_name=HG00140_ch_T0000682;gene_name=OFD1P3Y;ID=intron:HG00140_ch_T0000682:4;Name=OFD1P3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7114089	7114225	.	-	.	source_transcript=ENST00000453312.1;source_transcript_name=OFD1P3Y-201;source_gene=ENSG00000231988.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231988.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P3Y;alternative_source_transcripts=ENST00000453312.1,ENST00000453312.1;transcript_id=HG00140_ch_T0000682;gene_id=HG00140_ch_G0000207;Parent=HG00140_ch_T0000682;transcript_name=HG00140_ch_T0000682;gene_name=OFD1P3Y;ID=exon:HG00140_ch_T0000682:5;Name=OFD1P3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	7170723	7173067	.	+	.	source_gene_common_name=ENSG00000230025;source_gene=ENSG00000230025.1;alternative_source_transcripts=ENST00000434308.1,ENST00000434308.1;gene_id=HG00140_ch_G0000208;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000230025;gene_sources=liftoff;ID=HG00140_ch_G0000208;Name=ENSG00000230025
HG00140_chrY	CAT	transcript	7170723	7173067	1000	+	.	source_transcript=ENST00000434308.1;source_transcript_name=ENST00000434308;source_gene=ENSG00000230025.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230025.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434308.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230025;alternative_source_transcripts=ENST00000434308.1,ENST00000434308.1;transcript_id=HG00140_ch_T0000683;gene_id=HG00140_ch_G0000208;Parent=HG00140_ch_G0000208;transcript_name=HG00140_ch_T0000683;gene_name=ENSG00000230025;ID=HG00140_ch_T0000683;Name=ENSG00000230025
HG00140_chrY	CAT	exon	7170723	7171091	.	+	.	source_transcript=ENST00000434308.1;source_transcript_name=ENST00000434308;source_gene=ENSG00000230025.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230025.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230025;alternative_source_transcripts=ENST00000434308.1,ENST00000434308.1;transcript_id=HG00140_ch_T0000683;gene_id=HG00140_ch_G0000208;Parent=HG00140_ch_T0000683;transcript_name=HG00140_ch_T0000683;gene_name=ENSG00000230025;ID=exon:HG00140_ch_T0000683:0;Name=ENSG00000230025;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7171092	7172786	.	+	.	source_transcript=ENST00000434308.1;source_transcript_name=ENST00000434308;source_gene=ENSG00000230025.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230025.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230025;alternative_source_transcripts=ENST00000434308.1,ENST00000434308.1;transcript_id=HG00140_ch_T0000683;gene_id=HG00140_ch_G0000208;Parent=HG00140_ch_T0000683;transcript_name=HG00140_ch_T0000683;gene_name=ENSG00000230025;ID=intron:HG00140_ch_T0000683:0;Name=ENSG00000230025;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7172787	7172831	.	+	.	source_transcript=ENST00000434308.1;source_transcript_name=ENST00000434308;source_gene=ENSG00000230025.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230025.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230025;alternative_source_transcripts=ENST00000434308.1,ENST00000434308.1;transcript_id=HG00140_ch_T0000683;gene_id=HG00140_ch_G0000208;Parent=HG00140_ch_T0000683;transcript_name=HG00140_ch_T0000683;gene_name=ENSG00000230025;ID=exon:HG00140_ch_T0000683:1;Name=ENSG00000230025;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7172832	7172923	.	+	.	source_transcript=ENST00000434308.1;source_transcript_name=ENST00000434308;source_gene=ENSG00000230025.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230025.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230025;alternative_source_transcripts=ENST00000434308.1,ENST00000434308.1;transcript_id=HG00140_ch_T0000683;gene_id=HG00140_ch_G0000208;Parent=HG00140_ch_T0000683;transcript_name=HG00140_ch_T0000683;gene_name=ENSG00000230025;ID=intron:HG00140_ch_T0000683:1;Name=ENSG00000230025;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7172924	7173067	.	+	.	source_transcript=ENST00000434308.1;source_transcript_name=ENST00000434308;source_gene=ENSG00000230025.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230025.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230025;alternative_source_transcripts=ENST00000434308.1,ENST00000434308.1;transcript_id=HG00140_ch_T0000683;gene_id=HG00140_ch_G0000208;Parent=HG00140_ch_T0000683;transcript_name=HG00140_ch_T0000683;gene_name=ENSG00000230025;ID=exon:HG00140_ch_T0000683:2;Name=ENSG00000230025;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	7213369	7213754	.	+	.	source_gene_common_name=ENSG00000273731;source_gene=ENSG00000273731.1;alternative_source_transcripts=ENST00000614700.1,ENST00000614700.1;gene_id=HG00140_ch_G0000209;gene_biotype=processed_pseudogene;gene_name=ENSG00000273731;gene_sources=liftoff;ID=HG00140_ch_G0000209;Name=ENSG00000273731
HG00140_chrY	CAT	transcript	7213369	7213754	1000	+	.	source_transcript=ENST00000614700.1;source_transcript_name=ENST00000614700;source_gene=ENSG00000273731.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000273731.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000614700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614700.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273731;alternative_source_transcripts=ENST00000614700.1,ENST00000614700.1;transcript_id=HG00140_ch_T0000684;gene_id=HG00140_ch_G0000209;Parent=HG00140_ch_G0000209;transcript_name=HG00140_ch_T0000684;gene_name=ENSG00000273731;ID=HG00140_ch_T0000684;Name=ENSG00000273731
HG00140_chrY	CAT	exon	7213369	7213754	.	+	.	source_transcript=ENST00000614700.1;source_transcript_name=ENST00000614700;source_gene=ENSG00000273731.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000273731.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000614700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614700.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273731;alternative_source_transcripts=ENST00000614700.1,ENST00000614700.1;transcript_id=HG00140_ch_T0000684;gene_id=HG00140_ch_G0000209;Parent=HG00140_ch_T0000684;transcript_name=HG00140_ch_T0000684;gene_name=ENSG00000273731;ID=exon:HG00140_ch_T0000684:0;Name=ENSG00000273731;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	7222120	7229552	.	+	.	source_gene_common_name=ENSG00000301122;source_gene=ENSG00000301122.1;alternative_source_transcripts=ENST00000776360.1,ENST00000776360.1;gene_id=HG00140_ch_G0000210;gene_biotype=lncRNA;gene_name=ENSG00000301122;gene_sources=liftoff;ID=HG00140_ch_G0000210;Name=ENSG00000301122
HG00140_chrY	CAT	transcript	7222120	7229146	1000	+	.	source_transcript=ENST00000776360.1;source_transcript_name=ENST00000776360;source_gene=ENSG00000301122.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301122.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776360.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301122;alternative_source_transcripts=ENST00000776360.1,ENST00000776360.1;transcript_id=HG00140_ch_T0000685;gene_id=HG00140_ch_G0000210;Parent=HG00140_ch_G0000210;transcript_name=HG00140_ch_T0000685;gene_name=ENSG00000301122;ID=HG00140_ch_T0000685;Name=ENSG00000301122
HG00140_chrY	CAT	exon	7222120	7222235	.	+	.	source_transcript=ENST00000776360.1;source_transcript_name=ENST00000776360;source_gene=ENSG00000301122.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301122.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776360.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301122;alternative_source_transcripts=ENST00000776360.1,ENST00000776360.1;transcript_id=HG00140_ch_T0000685;gene_id=HG00140_ch_G0000210;Parent=HG00140_ch_T0000685;transcript_name=HG00140_ch_T0000685;gene_name=ENSG00000301122;ID=exon:HG00140_ch_T0000685:0;Name=ENSG00000301122;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7222236	7225959	.	+	.	source_transcript=ENST00000776360.1;source_transcript_name=ENST00000776360;source_gene=ENSG00000301122.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301122.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776360.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301122;alternative_source_transcripts=ENST00000776360.1,ENST00000776360.1;transcript_id=HG00140_ch_T0000685;gene_id=HG00140_ch_G0000210;Parent=HG00140_ch_T0000685;transcript_name=HG00140_ch_T0000685;gene_name=ENSG00000301122;ID=intron:HG00140_ch_T0000685:0;Name=ENSG00000301122;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7225960	7226537	.	+	.	source_transcript=ENST00000776360.1;source_transcript_name=ENST00000776360;source_gene=ENSG00000301122.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301122.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776360.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301122;alternative_source_transcripts=ENST00000776360.1,ENST00000776360.1;transcript_id=HG00140_ch_T0000685;gene_id=HG00140_ch_G0000210;Parent=HG00140_ch_T0000685;transcript_name=HG00140_ch_T0000685;gene_name=ENSG00000301122;ID=exon:HG00140_ch_T0000685:1;Name=ENSG00000301122;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7226538	7228779	.	+	.	source_transcript=ENST00000776360.1;source_transcript_name=ENST00000776360;source_gene=ENSG00000301122.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301122.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776360.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301122;alternative_source_transcripts=ENST00000776360.1,ENST00000776360.1;transcript_id=HG00140_ch_T0000685;gene_id=HG00140_ch_G0000210;Parent=HG00140_ch_T0000685;transcript_name=HG00140_ch_T0000685;gene_name=ENSG00000301122;ID=intron:HG00140_ch_T0000685:1;Name=ENSG00000301122;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7228780	7229146	.	+	.	source_transcript=ENST00000776360.1;source_transcript_name=ENST00000776360;source_gene=ENSG00000301122.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301122.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776360.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301122;alternative_source_transcripts=ENST00000776360.1,ENST00000776360.1;transcript_id=HG00140_ch_T0000685;gene_id=HG00140_ch_G0000210;Parent=HG00140_ch_T0000685;transcript_name=HG00140_ch_T0000685;gene_name=ENSG00000301122;ID=exon:HG00140_ch_T0000685:2;Name=ENSG00000301122;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7226012	7229552	1000	+	.	source_transcript=ENST00000776361.1;source_transcript_name=ENST00000776361;source_gene=ENSG00000301122.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301122.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776361.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776361.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301122;alternative_source_transcripts=ENST00000776361.1,ENST00000776361.1;transcript_id=HG00140_ch_T0000686;gene_id=HG00140_ch_G0000210;Parent=HG00140_ch_G0000210;transcript_name=HG00140_ch_T0000686;gene_name=ENSG00000301122;ID=HG00140_ch_T0000686;Name=ENSG00000301122
HG00140_chrY	CAT	exon	7226012	7226537	.	+	.	source_transcript=ENST00000776361.1;source_transcript_name=ENST00000776361;source_gene=ENSG00000301122.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301122.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776361.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776361.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301122;alternative_source_transcripts=ENST00000776361.1,ENST00000776361.1;transcript_id=HG00140_ch_T0000686;gene_id=HG00140_ch_G0000210;Parent=HG00140_ch_T0000686;transcript_name=HG00140_ch_T0000686;gene_name=ENSG00000301122;ID=exon:HG00140_ch_T0000686:0;Name=ENSG00000301122;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7226538	7228779	.	+	.	source_transcript=ENST00000776361.1;source_transcript_name=ENST00000776361;source_gene=ENSG00000301122.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301122.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776361.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776361.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301122;alternative_source_transcripts=ENST00000776361.1,ENST00000776361.1;transcript_id=HG00140_ch_T0000686;gene_id=HG00140_ch_G0000210;Parent=HG00140_ch_T0000686;transcript_name=HG00140_ch_T0000686;gene_name=ENSG00000301122;ID=intron:HG00140_ch_T0000686:0;Name=ENSG00000301122;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7228780	7229552	.	+	.	source_transcript=ENST00000776361.1;source_transcript_name=ENST00000776361;source_gene=ENSG00000301122.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301122.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776361.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776361.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301122;alternative_source_transcripts=ENST00000776361.1,ENST00000776361.1;transcript_id=HG00140_ch_T0000686;gene_id=HG00140_ch_G0000210;Parent=HG00140_ch_T0000686;transcript_name=HG00140_ch_T0000686;gene_name=ENSG00000301122;ID=exon:HG00140_ch_T0000686:1;Name=ENSG00000301122;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	7228750	7238599	.	-	.	source_gene_common_name=ENSG00000173357;source_gene=ENSG00000173357.13;gene_id=HG00140_ch_G0000211;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000173357;gene_sources=liftoff;ID=HG00140_ch_G0000211;Name=ENSG00000173357
HG00140_chrY	CAT	transcript	7228750	7238599	1000	-	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=HG00140_ch_T0000687;gene_id=HG00140_ch_G0000211;Parent=HG00140_ch_G0000211;transcript_name=HG00140_ch_T0000687;gene_name=ENSG00000173357;ID=HG00140_ch_T0000687;Name=ENSG00000173357
HG00140_chrY	CAT	exon	7228750	7229052	.	-	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=HG00140_ch_T0000687;gene_id=HG00140_ch_G0000211;Parent=HG00140_ch_T0000687;transcript_name=HG00140_ch_T0000687;gene_name=ENSG00000173357;ID=exon:HG00140_ch_T0000687:0;Name=ENSG00000173357;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7229053	7229458	.	-	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=HG00140_ch_T0000687;gene_id=HG00140_ch_G0000211;Parent=HG00140_ch_T0000687;transcript_name=HG00140_ch_T0000687;gene_name=ENSG00000173357;ID=intron:HG00140_ch_T0000687:0;Name=ENSG00000173357;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7229459	7229547	.	-	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=HG00140_ch_T0000687;gene_id=HG00140_ch_G0000211;Parent=HG00140_ch_T0000687;transcript_name=HG00140_ch_T0000687;gene_name=ENSG00000173357;ID=exon:HG00140_ch_T0000687:1;Name=ENSG00000173357;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7229548	7229628	.	-	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=HG00140_ch_T0000687;gene_id=HG00140_ch_G0000211;Parent=HG00140_ch_T0000687;transcript_name=HG00140_ch_T0000687;gene_name=ENSG00000173357;ID=intron:HG00140_ch_T0000687:1;Name=ENSG00000173357;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7229629	7229739	.	-	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=HG00140_ch_T0000687;gene_id=HG00140_ch_G0000211;Parent=HG00140_ch_T0000687;transcript_name=HG00140_ch_T0000687;gene_name=ENSG00000173357;ID=exon:HG00140_ch_T0000687:2;Name=ENSG00000173357;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7229740	7230618	.	-	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=HG00140_ch_T0000687;gene_id=HG00140_ch_G0000211;Parent=HG00140_ch_T0000687;transcript_name=HG00140_ch_T0000687;gene_name=ENSG00000173357;ID=intron:HG00140_ch_T0000687:2;Name=ENSG00000173357;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7230619	7230730	.	-	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=HG00140_ch_T0000687;gene_id=HG00140_ch_G0000211;Parent=HG00140_ch_T0000687;transcript_name=HG00140_ch_T0000687;gene_name=ENSG00000173357;ID=exon:HG00140_ch_T0000687:3;Name=ENSG00000173357;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7230731	7232724	.	-	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=HG00140_ch_T0000687;gene_id=HG00140_ch_G0000211;Parent=HG00140_ch_T0000687;transcript_name=HG00140_ch_T0000687;gene_name=ENSG00000173357;ID=intron:HG00140_ch_T0000687:3;Name=ENSG00000173357;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7232725	7232877	.	-	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=HG00140_ch_T0000687;gene_id=HG00140_ch_G0000211;Parent=HG00140_ch_T0000687;transcript_name=HG00140_ch_T0000687;gene_name=ENSG00000173357;ID=exon:HG00140_ch_T0000687:4;Name=ENSG00000173357;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7232878	7234762	.	-	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=HG00140_ch_T0000687;gene_id=HG00140_ch_G0000211;Parent=HG00140_ch_T0000687;transcript_name=HG00140_ch_T0000687;gene_name=ENSG00000173357;ID=intron:HG00140_ch_T0000687:4;Name=ENSG00000173357;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7234763	7234940	.	-	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=HG00140_ch_T0000687;gene_id=HG00140_ch_G0000211;Parent=HG00140_ch_T0000687;transcript_name=HG00140_ch_T0000687;gene_name=ENSG00000173357;ID=exon:HG00140_ch_T0000687:5;Name=ENSG00000173357;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7234941	7237625	.	-	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=HG00140_ch_T0000687;gene_id=HG00140_ch_G0000211;Parent=HG00140_ch_T0000687;transcript_name=HG00140_ch_T0000687;gene_name=ENSG00000173357;ID=intron:HG00140_ch_T0000687:5;Name=ENSG00000173357;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7237626	7237729	.	-	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=HG00140_ch_T0000687;gene_id=HG00140_ch_G0000211;Parent=HG00140_ch_T0000687;transcript_name=HG00140_ch_T0000687;gene_name=ENSG00000173357;ID=exon:HG00140_ch_T0000687:6;Name=ENSG00000173357;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7237730	7238490	.	-	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=HG00140_ch_T0000687;gene_id=HG00140_ch_G0000211;Parent=HG00140_ch_T0000687;transcript_name=HG00140_ch_T0000687;gene_name=ENSG00000173357;ID=intron:HG00140_ch_T0000687:6;Name=ENSG00000173357;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7238491	7238599	.	-	.	source_transcript=ENST00000455422.5;source_transcript_name=ENST00000455422;source_gene=ENSG00000173357.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000173357.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455422.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455422.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000173357;transcript_id=HG00140_ch_T0000687;gene_id=HG00140_ch_G0000211;Parent=HG00140_ch_T0000687;transcript_name=HG00140_ch_T0000687;gene_name=ENSG00000173357;ID=exon:HG00140_ch_T0000687:7;Name=ENSG00000173357;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	7230668	7234875	.	-	.	source_gene_common_name=ENSG00000290342;source_gene=ENSG00000290342.1;gene_id=HG00140_ch_G0000212;gene_biotype=lncRNA;gene_name=ENSG00000290342;gene_sources=liftoff;ID=HG00140_ch_G0000212;Name=ENSG00000290342
HG00140_chrY	CAT	transcript	7230668	7234875	1000	-	.	source_transcript=ENST00000311828.7;source_transcript_name=ENST00000311828;source_gene=ENSG00000290342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000311828.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000311828.7;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290342;transcript_id=HG00140_ch_T0000688;gene_id=HG00140_ch_G0000212;Parent=HG00140_ch_G0000212;transcript_name=HG00140_ch_T0000688;gene_name=ENSG00000290342;ID=HG00140_ch_T0000688;Name=ENSG00000290342
HG00140_chrY	CAT	exon	7230668	7230730	.	-	.	source_transcript=ENST00000311828.7;source_transcript_name=ENST00000311828;source_gene=ENSG00000290342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000311828.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000311828.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290342;transcript_id=HG00140_ch_T0000688;gene_id=HG00140_ch_G0000212;Parent=HG00140_ch_T0000688;transcript_name=HG00140_ch_T0000688;gene_name=ENSG00000290342;ID=exon:HG00140_ch_T0000688:0;Name=ENSG00000290342;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7230731	7232724	.	-	.	source_transcript=ENST00000311828.7;source_transcript_name=ENST00000311828;source_gene=ENSG00000290342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000311828.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000311828.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290342;transcript_id=HG00140_ch_T0000688;gene_id=HG00140_ch_G0000212;Parent=HG00140_ch_T0000688;transcript_name=HG00140_ch_T0000688;gene_name=ENSG00000290342;ID=intron:HG00140_ch_T0000688:0;Name=ENSG00000290342;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7232725	7232877	.	-	.	source_transcript=ENST00000311828.7;source_transcript_name=ENST00000311828;source_gene=ENSG00000290342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000311828.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000311828.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290342;transcript_id=HG00140_ch_T0000688;gene_id=HG00140_ch_G0000212;Parent=HG00140_ch_T0000688;transcript_name=HG00140_ch_T0000688;gene_name=ENSG00000290342;ID=exon:HG00140_ch_T0000688:1;Name=ENSG00000290342;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7232878	7234762	.	-	.	source_transcript=ENST00000311828.7;source_transcript_name=ENST00000311828;source_gene=ENSG00000290342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000311828.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000311828.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290342;transcript_id=HG00140_ch_T0000688;gene_id=HG00140_ch_G0000212;Parent=HG00140_ch_T0000688;transcript_name=HG00140_ch_T0000688;gene_name=ENSG00000290342;ID=intron:HG00140_ch_T0000688:1;Name=ENSG00000290342;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7234763	7234875	.	-	.	source_transcript=ENST00000311828.7;source_transcript_name=ENST00000311828;source_gene=ENSG00000290342.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290342.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000311828.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000311828.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290342;transcript_id=HG00140_ch_T0000688;gene_id=HG00140_ch_G0000212;Parent=HG00140_ch_T0000688;transcript_name=HG00140_ch_T0000688;gene_name=ENSG00000290342;ID=exon:HG00140_ch_T0000688:2;Name=ENSG00000290342;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	7241547	7243620	.	+	.	source_gene_common_name=ENSG00000228207;source_gene=ENSG00000228207.1;alternative_source_transcripts=ENST00000432613.1,ENST00000432613.1;gene_id=HG00140_ch_G0000213;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000228207;gene_sources=liftoff;ID=HG00140_ch_G0000213;Name=ENSG00000228207
HG00140_chrY	CAT	transcript	7241547	7243620	1000	+	.	source_transcript=ENST00000432613.1;source_transcript_name=ENST00000432613;source_gene=ENSG00000228207.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228207.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432613.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228207;alternative_source_transcripts=ENST00000432613.1,ENST00000432613.1;transcript_id=HG00140_ch_T0000689;gene_id=HG00140_ch_G0000213;Parent=HG00140_ch_G0000213;transcript_name=HG00140_ch_T0000689;gene_name=ENSG00000228207;ID=HG00140_ch_T0000689;Name=ENSG00000228207
HG00140_chrY	CAT	exon	7241547	7241832	.	+	.	source_transcript=ENST00000432613.1;source_transcript_name=ENST00000432613;source_gene=ENSG00000228207.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228207.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228207;alternative_source_transcripts=ENST00000432613.1,ENST00000432613.1;transcript_id=HG00140_ch_T0000689;gene_id=HG00140_ch_G0000213;Parent=HG00140_ch_T0000689;transcript_name=HG00140_ch_T0000689;gene_name=ENSG00000228207;ID=exon:HG00140_ch_T0000689:0;Name=ENSG00000228207;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7241833	7243083	.	+	.	source_transcript=ENST00000432613.1;source_transcript_name=ENST00000432613;source_gene=ENSG00000228207.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228207.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228207;alternative_source_transcripts=ENST00000432613.1,ENST00000432613.1;transcript_id=HG00140_ch_T0000689;gene_id=HG00140_ch_G0000213;Parent=HG00140_ch_T0000689;transcript_name=HG00140_ch_T0000689;gene_name=ENSG00000228207;ID=intron:HG00140_ch_T0000689:0;Name=ENSG00000228207;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7243084	7243222	.	+	.	source_transcript=ENST00000432613.1;source_transcript_name=ENST00000432613;source_gene=ENSG00000228207.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228207.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228207;alternative_source_transcripts=ENST00000432613.1,ENST00000432613.1;transcript_id=HG00140_ch_T0000689;gene_id=HG00140_ch_G0000213;Parent=HG00140_ch_T0000689;transcript_name=HG00140_ch_T0000689;gene_name=ENSG00000228207;ID=exon:HG00140_ch_T0000689:1;Name=ENSG00000228207;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7243223	7243309	.	+	.	source_transcript=ENST00000432613.1;source_transcript_name=ENST00000432613;source_gene=ENSG00000228207.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228207.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228207;alternative_source_transcripts=ENST00000432613.1,ENST00000432613.1;transcript_id=HG00140_ch_T0000689;gene_id=HG00140_ch_G0000213;Parent=HG00140_ch_T0000689;transcript_name=HG00140_ch_T0000689;gene_name=ENSG00000228207;ID=intron:HG00140_ch_T0000689:1;Name=ENSG00000228207;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7243310	7243453	.	+	.	source_transcript=ENST00000432613.1;source_transcript_name=ENST00000432613;source_gene=ENSG00000228207.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228207.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228207;alternative_source_transcripts=ENST00000432613.1,ENST00000432613.1;transcript_id=HG00140_ch_T0000689;gene_id=HG00140_ch_G0000213;Parent=HG00140_ch_T0000689;transcript_name=HG00140_ch_T0000689;gene_name=ENSG00000228207;ID=exon:HG00140_ch_T0000689:2;Name=ENSG00000228207;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7243454	7243564	.	+	.	source_transcript=ENST00000432613.1;source_transcript_name=ENST00000432613;source_gene=ENSG00000228207.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228207.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228207;alternative_source_transcripts=ENST00000432613.1,ENST00000432613.1;transcript_id=HG00140_ch_T0000689;gene_id=HG00140_ch_G0000213;Parent=HG00140_ch_T0000689;transcript_name=HG00140_ch_T0000689;gene_name=ENSG00000228207;ID=intron:HG00140_ch_T0000689:2;Name=ENSG00000228207;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7243565	7243620	.	+	.	source_transcript=ENST00000432613.1;source_transcript_name=ENST00000432613;source_gene=ENSG00000228207.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228207.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228207;alternative_source_transcripts=ENST00000432613.1,ENST00000432613.1;transcript_id=HG00140_ch_T0000689;gene_id=HG00140_ch_G0000213;Parent=HG00140_ch_T0000689;transcript_name=HG00140_ch_T0000689;gene_name=ENSG00000228207;ID=exon:HG00140_ch_T0000689:3;Name=ENSG00000228207;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	7327488	7361637	.	+	.	source_gene_common_name=TTTY11;source_gene=ENSG00000290381.2;gene_id=HG00140_ch_G0000214;gene_biotype=lncRNA;gene_name=TTTY11;gene_sources=liftoff;ID=HG00140_ch_G0000214;Name=TTTY11
HG00140_chrY	CAT	transcript	7327488	7329475	1000	+	.	source_transcript=ENST00000806873.1;source_transcript_name=TTTY11-203;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000806873.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000806873.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=HG00140_ch_T0000690;gene_id=HG00140_ch_G0000214;Parent=HG00140_ch_G0000214;transcript_name=HG00140_ch_T0000690;gene_name=TTTY11;ID=HG00140_ch_T0000690;Name=TTTY11
HG00140_chrY	CAT	exon	7327488	7327605	.	+	.	source_transcript=ENST00000806873.1;source_transcript_name=TTTY11-203;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000806873.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000806873.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=HG00140_ch_T0000690;gene_id=HG00140_ch_G0000214;Parent=HG00140_ch_T0000690;transcript_name=HG00140_ch_T0000690;gene_name=TTTY11;ID=exon:HG00140_ch_T0000690:0;Name=TTTY11;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7327606	7329021	.	+	.	source_transcript=ENST00000806873.1;source_transcript_name=TTTY11-203;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000806873.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000806873.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=HG00140_ch_T0000690;gene_id=HG00140_ch_G0000214;Parent=HG00140_ch_T0000690;transcript_name=HG00140_ch_T0000690;gene_name=TTTY11;ID=intron:HG00140_ch_T0000690:0;Name=TTTY11;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7329022	7329475	.	+	.	source_transcript=ENST00000806873.1;source_transcript_name=TTTY11-203;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000806873.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000806873.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=HG00140_ch_T0000690;gene_id=HG00140_ch_G0000214;Parent=HG00140_ch_T0000690;transcript_name=HG00140_ch_T0000690;gene_name=TTTY11;ID=exon:HG00140_ch_T0000690:1;Name=TTTY11;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7327569	7361637	1000	+	.	source_transcript=ENST00000253470.4;source_transcript_name=TTTY11-202;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253470.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253470.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=HG00140_ch_T0000691;gene_id=HG00140_ch_G0000214;Parent=HG00140_ch_G0000214;transcript_name=HG00140_ch_T0000691;gene_name=TTTY11;ID=HG00140_ch_T0000691;Name=TTTY11
HG00140_chrY	CAT	exon	7327569	7327605	.	+	.	source_transcript=ENST00000253470.4;source_transcript_name=TTTY11-202;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253470.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253470.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=HG00140_ch_T0000691;gene_id=HG00140_ch_G0000214;Parent=HG00140_ch_T0000691;transcript_name=HG00140_ch_T0000691;gene_name=TTTY11;ID=exon:HG00140_ch_T0000691:0;Name=TTTY11;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7327606	7350002	.	+	.	source_transcript=ENST00000253470.4;source_transcript_name=TTTY11-202;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253470.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253470.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=HG00140_ch_T0000691;gene_id=HG00140_ch_G0000214;Parent=HG00140_ch_T0000691;transcript_name=HG00140_ch_T0000691;gene_name=TTTY11;ID=intron:HG00140_ch_T0000691:0;Name=TTTY11;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7350003	7350086	.	+	.	source_transcript=ENST00000253470.4;source_transcript_name=TTTY11-202;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253470.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253470.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=HG00140_ch_T0000691;gene_id=HG00140_ch_G0000214;Parent=HG00140_ch_T0000691;transcript_name=HG00140_ch_T0000691;gene_name=TTTY11;ID=exon:HG00140_ch_T0000691:1;Name=TTTY11;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7350087	7355644	.	+	.	source_transcript=ENST00000253470.4;source_transcript_name=TTTY11-202;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253470.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253470.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=HG00140_ch_T0000691;gene_id=HG00140_ch_G0000214;Parent=HG00140_ch_T0000691;transcript_name=HG00140_ch_T0000691;gene_name=TTTY11;ID=intron:HG00140_ch_T0000691:1;Name=TTTY11;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7355645	7355947	.	+	.	source_transcript=ENST00000253470.4;source_transcript_name=TTTY11-202;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253470.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253470.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=HG00140_ch_T0000691;gene_id=HG00140_ch_G0000214;Parent=HG00140_ch_T0000691;transcript_name=HG00140_ch_T0000691;gene_name=TTTY11;ID=exon:HG00140_ch_T0000691:2;Name=TTTY11;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7355948	7360743	.	+	.	source_transcript=ENST00000253470.4;source_transcript_name=TTTY11-202;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253470.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253470.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=HG00140_ch_T0000691;gene_id=HG00140_ch_G0000214;Parent=HG00140_ch_T0000691;transcript_name=HG00140_ch_T0000691;gene_name=TTTY11;ID=intron:HG00140_ch_T0000691:2;Name=TTTY11;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7360744	7361059	.	+	.	source_transcript=ENST00000253470.4;source_transcript_name=TTTY11-202;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253470.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253470.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=HG00140_ch_T0000691;gene_id=HG00140_ch_G0000214;Parent=HG00140_ch_T0000691;transcript_name=HG00140_ch_T0000691;gene_name=TTTY11;ID=exon:HG00140_ch_T0000691:3;Name=TTTY11;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7361060	7361540	.	+	.	source_transcript=ENST00000253470.4;source_transcript_name=TTTY11-202;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253470.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253470.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=HG00140_ch_T0000691;gene_id=HG00140_ch_G0000214;Parent=HG00140_ch_T0000691;transcript_name=HG00140_ch_T0000691;gene_name=TTTY11;ID=intron:HG00140_ch_T0000691:3;Name=TTTY11;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7361541	7361637	.	+	.	source_transcript=ENST00000253470.4;source_transcript_name=TTTY11-202;source_gene=ENSG00000290381.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290381.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253470.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253470.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=HG00140_ch_T0000691;gene_id=HG00140_ch_G0000214;Parent=HG00140_ch_T0000691;transcript_name=HG00140_ch_T0000691;gene_name=TTTY11;ID=exon:HG00140_ch_T0000691:4;Name=TTTY11;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	7355645	7355947	.	+	.	source_gene_common_name=TTTY11;source_gene=ENSG00000180910.9;gene_id=HG00140_ch_G0000215;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TTTY11;gene_sources=liftoff;ID=HG00140_ch_G0000215;Name=TTTY11
HG00140_chrY	CAT	transcript	7355645	7355947	1000	+	.	source_transcript=ENST00000651367.1;source_transcript_name=TTTY11-201;source_gene=ENSG00000180910.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000180910.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000651367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651367.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=HG00140_ch_T0000692;gene_id=HG00140_ch_G0000215;Parent=HG00140_ch_G0000215;transcript_name=HG00140_ch_T0000692;gene_name=TTTY11;ID=HG00140_ch_T0000692;Name=TTTY11
HG00140_chrY	CAT	exon	7355645	7355947	.	+	.	source_transcript=ENST00000651367.1;source_transcript_name=TTTY11-201;source_gene=ENSG00000180910.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000180910.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000651367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;transcript_id=HG00140_ch_T0000692;gene_id=HG00140_ch_G0000215;Parent=HG00140_ch_T0000692;transcript_name=HG00140_ch_T0000692;gene_name=TTTY11;ID=exon:HG00140_ch_T0000692:0;Name=TTTY11;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	7405691	7423175	.	+	.	source_gene_common_name=ENSG00000309903;source_gene=ENSG00000309903.1;alternative_source_transcripts=ENST00000845392.1,ENST00000845392.1;gene_id=HG00140_ch_G0000216;gene_biotype=lncRNA;gene_name=ENSG00000309903;gene_sources=liftoff;ID=HG00140_ch_G0000216;Name=ENSG00000309903
HG00140_chrY	CAT	transcript	7405691	7423172	1000	+	.	source_transcript=ENST00000845392.1;source_transcript_name=ENST00000845392;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845392.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845392.1,ENST00000845392.1;transcript_id=HG00140_ch_T0000693;gene_id=HG00140_ch_G0000216;Parent=HG00140_ch_G0000216;transcript_name=HG00140_ch_T0000693;gene_name=ENSG00000309903;ID=HG00140_ch_T0000693;Name=ENSG00000309903
HG00140_chrY	CAT	exon	7405691	7405870	.	+	.	source_transcript=ENST00000845392.1;source_transcript_name=ENST00000845392;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845392.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845392.1,ENST00000845392.1;transcript_id=HG00140_ch_T0000693;gene_id=HG00140_ch_G0000216;Parent=HG00140_ch_T0000693;transcript_name=HG00140_ch_T0000693;gene_name=ENSG00000309903;ID=exon:HG00140_ch_T0000693:0;Name=ENSG00000309903;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7405871	7411478	.	+	.	source_transcript=ENST00000845392.1;source_transcript_name=ENST00000845392;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845392.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845392.1,ENST00000845392.1;transcript_id=HG00140_ch_T0000693;gene_id=HG00140_ch_G0000216;Parent=HG00140_ch_T0000693;transcript_name=HG00140_ch_T0000693;gene_name=ENSG00000309903;ID=intron:HG00140_ch_T0000693:0;Name=ENSG00000309903;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7411479	7411578	.	+	.	source_transcript=ENST00000845392.1;source_transcript_name=ENST00000845392;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845392.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845392.1,ENST00000845392.1;transcript_id=HG00140_ch_T0000693;gene_id=HG00140_ch_G0000216;Parent=HG00140_ch_T0000693;transcript_name=HG00140_ch_T0000693;gene_name=ENSG00000309903;ID=exon:HG00140_ch_T0000693:1;Name=ENSG00000309903;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7411579	7422312	.	+	.	source_transcript=ENST00000845392.1;source_transcript_name=ENST00000845392;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845392.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845392.1,ENST00000845392.1;transcript_id=HG00140_ch_T0000693;gene_id=HG00140_ch_G0000216;Parent=HG00140_ch_T0000693;transcript_name=HG00140_ch_T0000693;gene_name=ENSG00000309903;ID=intron:HG00140_ch_T0000693:1;Name=ENSG00000309903;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7422313	7422575	.	+	.	source_transcript=ENST00000845392.1;source_transcript_name=ENST00000845392;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845392.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845392.1,ENST00000845392.1;transcript_id=HG00140_ch_T0000693;gene_id=HG00140_ch_G0000216;Parent=HG00140_ch_T0000693;transcript_name=HG00140_ch_T0000693;gene_name=ENSG00000309903;ID=exon:HG00140_ch_T0000693:2;Name=ENSG00000309903;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7422576	7422665	.	+	.	source_transcript=ENST00000845392.1;source_transcript_name=ENST00000845392;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845392.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845392.1,ENST00000845392.1;transcript_id=HG00140_ch_T0000693;gene_id=HG00140_ch_G0000216;Parent=HG00140_ch_T0000693;transcript_name=HG00140_ch_T0000693;gene_name=ENSG00000309903;ID=intron:HG00140_ch_T0000693:2;Name=ENSG00000309903;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7422666	7422761	.	+	.	source_transcript=ENST00000845392.1;source_transcript_name=ENST00000845392;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845392.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845392.1,ENST00000845392.1;transcript_id=HG00140_ch_T0000693;gene_id=HG00140_ch_G0000216;Parent=HG00140_ch_T0000693;transcript_name=HG00140_ch_T0000693;gene_name=ENSG00000309903;ID=exon:HG00140_ch_T0000693:3;Name=ENSG00000309903;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7422762	7422858	.	+	.	source_transcript=ENST00000845392.1;source_transcript_name=ENST00000845392;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845392.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845392.1,ENST00000845392.1;transcript_id=HG00140_ch_T0000693;gene_id=HG00140_ch_G0000216;Parent=HG00140_ch_T0000693;transcript_name=HG00140_ch_T0000693;gene_name=ENSG00000309903;ID=intron:HG00140_ch_T0000693:3;Name=ENSG00000309903;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7422859	7423172	.	+	.	source_transcript=ENST00000845392.1;source_transcript_name=ENST00000845392;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845392.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845392.1,ENST00000845392.1;transcript_id=HG00140_ch_T0000693;gene_id=HG00140_ch_G0000216;Parent=HG00140_ch_T0000693;transcript_name=HG00140_ch_T0000693;gene_name=ENSG00000309903;ID=exon:HG00140_ch_T0000693:4;Name=ENSG00000309903;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7420656	7423175	1000	+	.	source_transcript=ENST00000845393.1;source_transcript_name=ENST00000845393;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845393.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845393.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845393.1,ENST00000845393.1;transcript_id=HG00140_ch_T0000694;gene_id=HG00140_ch_G0000216;Parent=HG00140_ch_G0000216;transcript_name=HG00140_ch_T0000694;gene_name=ENSG00000309903;ID=HG00140_ch_T0000694;Name=ENSG00000309903
HG00140_chrY	CAT	exon	7420656	7420844	.	+	.	source_transcript=ENST00000845393.1;source_transcript_name=ENST00000845393;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845393.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845393.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845393.1,ENST00000845393.1;transcript_id=HG00140_ch_T0000694;gene_id=HG00140_ch_G0000216;Parent=HG00140_ch_T0000694;transcript_name=HG00140_ch_T0000694;gene_name=ENSG00000309903;ID=exon:HG00140_ch_T0000694:0;Name=ENSG00000309903;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7420845	7422312	.	+	.	source_transcript=ENST00000845393.1;source_transcript_name=ENST00000845393;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845393.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845393.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845393.1,ENST00000845393.1;transcript_id=HG00140_ch_T0000694;gene_id=HG00140_ch_G0000216;Parent=HG00140_ch_T0000694;transcript_name=HG00140_ch_T0000694;gene_name=ENSG00000309903;ID=intron:HG00140_ch_T0000694:0;Name=ENSG00000309903;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7422313	7422575	.	+	.	source_transcript=ENST00000845393.1;source_transcript_name=ENST00000845393;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845393.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845393.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845393.1,ENST00000845393.1;transcript_id=HG00140_ch_T0000694;gene_id=HG00140_ch_G0000216;Parent=HG00140_ch_T0000694;transcript_name=HG00140_ch_T0000694;gene_name=ENSG00000309903;ID=exon:HG00140_ch_T0000694:1;Name=ENSG00000309903;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7422576	7422665	.	+	.	source_transcript=ENST00000845393.1;source_transcript_name=ENST00000845393;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845393.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845393.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845393.1,ENST00000845393.1;transcript_id=HG00140_ch_T0000694;gene_id=HG00140_ch_G0000216;Parent=HG00140_ch_T0000694;transcript_name=HG00140_ch_T0000694;gene_name=ENSG00000309903;ID=intron:HG00140_ch_T0000694:1;Name=ENSG00000309903;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7422666	7422761	.	+	.	source_transcript=ENST00000845393.1;source_transcript_name=ENST00000845393;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845393.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845393.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845393.1,ENST00000845393.1;transcript_id=HG00140_ch_T0000694;gene_id=HG00140_ch_G0000216;Parent=HG00140_ch_T0000694;transcript_name=HG00140_ch_T0000694;gene_name=ENSG00000309903;ID=exon:HG00140_ch_T0000694:2;Name=ENSG00000309903;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7422762	7422858	.	+	.	source_transcript=ENST00000845393.1;source_transcript_name=ENST00000845393;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845393.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845393.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845393.1,ENST00000845393.1;transcript_id=HG00140_ch_T0000694;gene_id=HG00140_ch_G0000216;Parent=HG00140_ch_T0000694;transcript_name=HG00140_ch_T0000694;gene_name=ENSG00000309903;ID=intron:HG00140_ch_T0000694:2;Name=ENSG00000309903;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7422859	7423175	.	+	.	source_transcript=ENST00000845393.1;source_transcript_name=ENST00000845393;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845393.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845393.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845393.1,ENST00000845393.1;transcript_id=HG00140_ch_T0000694;gene_id=HG00140_ch_G0000216;Parent=HG00140_ch_T0000694;transcript_name=HG00140_ch_T0000694;gene_name=ENSG00000309903;ID=exon:HG00140_ch_T0000694:3;Name=ENSG00000309903;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7420679	7422624	1000	+	.	source_transcript=ENST00000845394.1;source_transcript_name=ENST00000845394;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845394.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845394.1,ENST00000845394.1;transcript_id=HG00140_ch_T0000695;gene_id=HG00140_ch_G0000216;Parent=HG00140_ch_G0000216;transcript_name=HG00140_ch_T0000695;gene_name=ENSG00000309903;ID=HG00140_ch_T0000695;Name=ENSG00000309903
HG00140_chrY	CAT	exon	7420679	7420844	.	+	.	source_transcript=ENST00000845394.1;source_transcript_name=ENST00000845394;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845394.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845394.1,ENST00000845394.1;transcript_id=HG00140_ch_T0000695;gene_id=HG00140_ch_G0000216;Parent=HG00140_ch_T0000695;transcript_name=HG00140_ch_T0000695;gene_name=ENSG00000309903;ID=exon:HG00140_ch_T0000695:0;Name=ENSG00000309903;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7420845	7422312	.	+	.	source_transcript=ENST00000845394.1;source_transcript_name=ENST00000845394;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845394.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845394.1,ENST00000845394.1;transcript_id=HG00140_ch_T0000695;gene_id=HG00140_ch_G0000216;Parent=HG00140_ch_T0000695;transcript_name=HG00140_ch_T0000695;gene_name=ENSG00000309903;ID=intron:HG00140_ch_T0000695:0;Name=ENSG00000309903;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7422313	7422624	.	+	.	source_transcript=ENST00000845394.1;source_transcript_name=ENST00000845394;source_gene=ENSG00000309903.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309903.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000845394.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000845394.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309903;alternative_source_transcripts=ENST00000845394.1,ENST00000845394.1;transcript_id=HG00140_ch_T0000695;gene_id=HG00140_ch_G0000216;Parent=HG00140_ch_T0000695;transcript_name=HG00140_ch_T0000695;gene_name=ENSG00000309903;ID=exon:HG00140_ch_T0000695:1;Name=ENSG00000309903;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	7431114	7594588	.	-	.	source_gene_common_name=LINC00279;source_gene=ENSG00000286217.3;gene_id=HG00140_ch_G0000217;gene_biotype=lncRNA;gene_name=LINC00279;gene_sources=liftoff;ID=HG00140_ch_G0000217;Name=LINC00279
HG00140_chrY	CAT	transcript	7431114	7561620	1000	-	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000696;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_G0000217;transcript_name=HG00140_ch_T0000696;gene_name=LINC00279;ID=HG00140_ch_T0000696;Name=LINC00279
HG00140_chrY	CAT	exon	7431114	7431685	.	-	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000696;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000696;transcript_name=HG00140_ch_T0000696;gene_name=LINC00279;ID=exon:HG00140_ch_T0000696:0;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7431686	7434678	.	-	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000696;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000696;transcript_name=HG00140_ch_T0000696;gene_name=LINC00279;ID=intron:HG00140_ch_T0000696:0;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7434679	7434840	.	-	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000696;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000696;transcript_name=HG00140_ch_T0000696;gene_name=LINC00279;ID=exon:HG00140_ch_T0000696:1;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7434841	7439685	.	-	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000696;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000696;transcript_name=HG00140_ch_T0000696;gene_name=LINC00279;ID=intron:HG00140_ch_T0000696:1;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7439686	7439847	.	-	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000696;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000696;transcript_name=HG00140_ch_T0000696;gene_name=LINC00279;ID=exon:HG00140_ch_T0000696:2;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7439848	7444715	.	-	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000696;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000696;transcript_name=HG00140_ch_T0000696;gene_name=LINC00279;ID=intron:HG00140_ch_T0000696:2;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7444716	7444877	.	-	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000696;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000696;transcript_name=HG00140_ch_T0000696;gene_name=LINC00279;ID=exon:HG00140_ch_T0000696:3;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7444878	7447030	.	-	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000696;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000696;transcript_name=HG00140_ch_T0000696;gene_name=LINC00279;ID=intron:HG00140_ch_T0000696:3;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7447031	7447192	.	-	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000696;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000696;transcript_name=HG00140_ch_T0000696;gene_name=LINC00279;ID=exon:HG00140_ch_T0000696:4;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7447193	7451738	.	-	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000696;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000696;transcript_name=HG00140_ch_T0000696;gene_name=LINC00279;ID=intron:HG00140_ch_T0000696:4;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7451739	7451934	.	-	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000696;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000696;transcript_name=HG00140_ch_T0000696;gene_name=LINC00279;ID=exon:HG00140_ch_T0000696:5;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7451935	7454605	.	-	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000696;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000696;transcript_name=HG00140_ch_T0000696;gene_name=LINC00279;ID=intron:HG00140_ch_T0000696:5;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7454606	7454767	.	-	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000696;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000696;transcript_name=HG00140_ch_T0000696;gene_name=LINC00279;ID=exon:HG00140_ch_T0000696:6;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7454768	7457550	.	-	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000696;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000696;transcript_name=HG00140_ch_T0000696;gene_name=LINC00279;ID=intron:HG00140_ch_T0000696:6;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7457551	7457754	.	-	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000696;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000696;transcript_name=HG00140_ch_T0000696;gene_name=LINC00279;ID=exon:HG00140_ch_T0000696:7;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7457755	7462463	.	-	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000696;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000696;transcript_name=HG00140_ch_T0000696;gene_name=LINC00279;ID=intron:HG00140_ch_T0000696:7;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7462464	7462625	.	-	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000696;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000696;transcript_name=HG00140_ch_T0000696;gene_name=LINC00279;ID=exon:HG00140_ch_T0000696:8;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7462626	7464056	.	-	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000696;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000696;transcript_name=HG00140_ch_T0000696;gene_name=LINC00279;ID=intron:HG00140_ch_T0000696:8;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7464057	7464216	.	-	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000696;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000696;transcript_name=HG00140_ch_T0000696;gene_name=LINC00279;ID=exon:HG00140_ch_T0000696:9;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7464217	7466540	.	-	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000696;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000696;transcript_name=HG00140_ch_T0000696;gene_name=LINC00279;ID=intron:HG00140_ch_T0000696:9;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7466541	7466615	.	-	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000696;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000696;transcript_name=HG00140_ch_T0000696;gene_name=LINC00279;ID=exon:HG00140_ch_T0000696:10;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7466616	7561378	.	-	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000696;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000696;transcript_name=HG00140_ch_T0000696;gene_name=LINC00279;ID=intron:HG00140_ch_T0000696:10;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7561379	7561620	.	-	.	source_transcript=ENST00000650816.1;source_transcript_name=LINC00279-203;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000696;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000696;transcript_name=HG00140_ch_T0000696;gene_name=LINC00279;ID=exon:HG00140_ch_T0000696:11;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7450113	7561573	1000	-	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000703;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_G0000217;transcript_name=HG00140_ch_T0000703;gene_name=LINC00279;ID=HG00140_ch_T0000703;Name=LINC00279
HG00140_chrY	CAT	exon	7450113	7450561	.	-	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000703;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000703;transcript_name=HG00140_ch_T0000703;gene_name=LINC00279;ID=exon:HG00140_ch_T0000703:0;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7450562	7450786	.	-	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000703;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000703;transcript_name=HG00140_ch_T0000703;gene_name=LINC00279;ID=intron:HG00140_ch_T0000703:0;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7450787	7451934	.	-	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000703;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000703;transcript_name=HG00140_ch_T0000703;gene_name=LINC00279;ID=exon:HG00140_ch_T0000703:1;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7451935	7454605	.	-	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000703;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000703;transcript_name=HG00140_ch_T0000703;gene_name=LINC00279;ID=intron:HG00140_ch_T0000703:1;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7454606	7454767	.	-	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000703;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000703;transcript_name=HG00140_ch_T0000703;gene_name=LINC00279;ID=exon:HG00140_ch_T0000703:2;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7454768	7457550	.	-	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000703;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000703;transcript_name=HG00140_ch_T0000703;gene_name=LINC00279;ID=intron:HG00140_ch_T0000703:2;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7457551	7457754	.	-	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000703;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000703;transcript_name=HG00140_ch_T0000703;gene_name=LINC00279;ID=exon:HG00140_ch_T0000703:3;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7457755	7462463	.	-	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000703;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000703;transcript_name=HG00140_ch_T0000703;gene_name=LINC00279;ID=intron:HG00140_ch_T0000703:3;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7462464	7462625	.	-	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000703;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000703;transcript_name=HG00140_ch_T0000703;gene_name=LINC00279;ID=exon:HG00140_ch_T0000703:4;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7462626	7464056	.	-	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000703;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000703;transcript_name=HG00140_ch_T0000703;gene_name=LINC00279;ID=intron:HG00140_ch_T0000703:4;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7464057	7464216	.	-	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000703;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000703;transcript_name=HG00140_ch_T0000703;gene_name=LINC00279;ID=exon:HG00140_ch_T0000703:5;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7464217	7466540	.	-	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000703;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000703;transcript_name=HG00140_ch_T0000703;gene_name=LINC00279;ID=intron:HG00140_ch_T0000703:5;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7466541	7466615	.	-	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000703;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000703;transcript_name=HG00140_ch_T0000703;gene_name=LINC00279;ID=exon:HG00140_ch_T0000703:6;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7466616	7561378	.	-	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000703;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000703;transcript_name=HG00140_ch_T0000703;gene_name=LINC00279;ID=intron:HG00140_ch_T0000703:6;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7561379	7561573	.	-	.	source_transcript=ENST00000651700.2;source_transcript_name=LINC00279-205;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000703;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000703;transcript_name=HG00140_ch_T0000703;gene_name=LINC00279;ID=exon:HG00140_ch_T0000703:7;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7457507	7561631	1000	-	.	source_transcript=ENST00000842833.1;source_transcript_name=LINC00279-210;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842833.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000710;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_G0000217;transcript_name=HG00140_ch_T0000710;gene_name=LINC00279;ID=HG00140_ch_T0000710;Name=LINC00279
HG00140_chrY	CAT	exon	7457507	7457754	.	-	.	source_transcript=ENST00000842833.1;source_transcript_name=LINC00279-210;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842833.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000710;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000710;transcript_name=HG00140_ch_T0000710;gene_name=LINC00279;ID=exon:HG00140_ch_T0000710:0;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7457755	7462463	.	-	.	source_transcript=ENST00000842833.1;source_transcript_name=LINC00279-210;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842833.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000710;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000710;transcript_name=HG00140_ch_T0000710;gene_name=LINC00279;ID=intron:HG00140_ch_T0000710:0;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7462464	7462625	.	-	.	source_transcript=ENST00000842833.1;source_transcript_name=LINC00279-210;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842833.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000710;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000710;transcript_name=HG00140_ch_T0000710;gene_name=LINC00279;ID=exon:HG00140_ch_T0000710:1;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7462626	7464056	.	-	.	source_transcript=ENST00000842833.1;source_transcript_name=LINC00279-210;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842833.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000710;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000710;transcript_name=HG00140_ch_T0000710;gene_name=LINC00279;ID=intron:HG00140_ch_T0000710:1;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7464057	7464216	.	-	.	source_transcript=ENST00000842833.1;source_transcript_name=LINC00279-210;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842833.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000710;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000710;transcript_name=HG00140_ch_T0000710;gene_name=LINC00279;ID=exon:HG00140_ch_T0000710:2;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7464217	7466540	.	-	.	source_transcript=ENST00000842833.1;source_transcript_name=LINC00279-210;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842833.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000710;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000710;transcript_name=HG00140_ch_T0000710;gene_name=LINC00279;ID=intron:HG00140_ch_T0000710:2;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7466541	7466615	.	-	.	source_transcript=ENST00000842833.1;source_transcript_name=LINC00279-210;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842833.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000710;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000710;transcript_name=HG00140_ch_T0000710;gene_name=LINC00279;ID=exon:HG00140_ch_T0000710:3;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7466616	7561378	.	-	.	source_transcript=ENST00000842833.1;source_transcript_name=LINC00279-210;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842833.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000710;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000710;transcript_name=HG00140_ch_T0000710;gene_name=LINC00279;ID=intron:HG00140_ch_T0000710:3;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7561379	7561631	.	-	.	source_transcript=ENST00000842833.1;source_transcript_name=LINC00279-210;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842833.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842833.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000710;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000710;transcript_name=HG00140_ch_T0000710;gene_name=LINC00279;ID=exon:HG00140_ch_T0000710:4;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7457508	7459122	1000	-	.	source_transcript=ENST00000842842.1;source_transcript_name=LINC00279-219;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842842.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842842.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000711;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_G0000217;transcript_name=HG00140_ch_T0000711;gene_name=LINC00279;ID=HG00140_ch_T0000711;Name=LINC00279
HG00140_chrY	CAT	exon	7457508	7457754	.	-	.	source_transcript=ENST00000842842.1;source_transcript_name=LINC00279-219;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842842.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842842.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000711;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000711;transcript_name=HG00140_ch_T0000711;gene_name=LINC00279;ID=exon:HG00140_ch_T0000711:0;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7457755	7458867	.	-	.	source_transcript=ENST00000842842.1;source_transcript_name=LINC00279-219;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842842.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842842.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000711;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000711;transcript_name=HG00140_ch_T0000711;gene_name=LINC00279;ID=intron:HG00140_ch_T0000711:0;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7458868	7459122	.	-	.	source_transcript=ENST00000842842.1;source_transcript_name=LINC00279-219;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842842.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842842.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000711;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000711;transcript_name=HG00140_ch_T0000711;gene_name=LINC00279;ID=exon:HG00140_ch_T0000711:1;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7457511	7467099	1000	-	.	source_transcript=ENST00000842840.1;source_transcript_name=LINC00279-217;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842840.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000712;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_G0000217;transcript_name=HG00140_ch_T0000712;gene_name=LINC00279;ID=HG00140_ch_T0000712;Name=LINC00279
HG00140_chrY	CAT	exon	7457511	7457754	.	-	.	source_transcript=ENST00000842840.1;source_transcript_name=LINC00279-217;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842840.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000712;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000712;transcript_name=HG00140_ch_T0000712;gene_name=LINC00279;ID=exon:HG00140_ch_T0000712:0;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7457755	7462463	.	-	.	source_transcript=ENST00000842840.1;source_transcript_name=LINC00279-217;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842840.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000712;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000712;transcript_name=HG00140_ch_T0000712;gene_name=LINC00279;ID=intron:HG00140_ch_T0000712:0;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7462464	7462625	.	-	.	source_transcript=ENST00000842840.1;source_transcript_name=LINC00279-217;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842840.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000712;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000712;transcript_name=HG00140_ch_T0000712;gene_name=LINC00279;ID=exon:HG00140_ch_T0000712:1;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7462626	7464056	.	-	.	source_transcript=ENST00000842840.1;source_transcript_name=LINC00279-217;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842840.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000712;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000712;transcript_name=HG00140_ch_T0000712;gene_name=LINC00279;ID=intron:HG00140_ch_T0000712:1;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7464057	7464216	.	-	.	source_transcript=ENST00000842840.1;source_transcript_name=LINC00279-217;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842840.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000712;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000712;transcript_name=HG00140_ch_T0000712;gene_name=LINC00279;ID=exon:HG00140_ch_T0000712:2;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7464217	7466540	.	-	.	source_transcript=ENST00000842840.1;source_transcript_name=LINC00279-217;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842840.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000712;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000712;transcript_name=HG00140_ch_T0000712;gene_name=LINC00279;ID=intron:HG00140_ch_T0000712:2;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7466541	7466615	.	-	.	source_transcript=ENST00000842840.1;source_transcript_name=LINC00279-217;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842840.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000712;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000712;transcript_name=HG00140_ch_T0000712;gene_name=LINC00279;ID=exon:HG00140_ch_T0000712:3;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7466616	7466886	.	-	.	source_transcript=ENST00000842840.1;source_transcript_name=LINC00279-217;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842840.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000712;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000712;transcript_name=HG00140_ch_T0000712;gene_name=LINC00279;ID=intron:HG00140_ch_T0000712:3;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7466887	7467099	.	-	.	source_transcript=ENST00000842840.1;source_transcript_name=LINC00279-217;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842840.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000712;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000712;transcript_name=HG00140_ch_T0000712;gene_name=LINC00279;ID=exon:HG00140_ch_T0000712:4;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7457512	7512025	1000	-	.	source_transcript=ENST00000842837.1;source_transcript_name=LINC00279-214;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842837.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000713;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_G0000217;transcript_name=HG00140_ch_T0000713;gene_name=LINC00279;ID=HG00140_ch_T0000713;Name=LINC00279
HG00140_chrY	CAT	exon	7457512	7457754	.	-	.	source_transcript=ENST00000842837.1;source_transcript_name=LINC00279-214;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842837.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000713;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000713;transcript_name=HG00140_ch_T0000713;gene_name=LINC00279;ID=exon:HG00140_ch_T0000713:0;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7457755	7462463	.	-	.	source_transcript=ENST00000842837.1;source_transcript_name=LINC00279-214;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842837.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000713;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000713;transcript_name=HG00140_ch_T0000713;gene_name=LINC00279;ID=intron:HG00140_ch_T0000713:0;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7462464	7462625	.	-	.	source_transcript=ENST00000842837.1;source_transcript_name=LINC00279-214;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842837.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000713;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000713;transcript_name=HG00140_ch_T0000713;gene_name=LINC00279;ID=exon:HG00140_ch_T0000713:1;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7462626	7464056	.	-	.	source_transcript=ENST00000842837.1;source_transcript_name=LINC00279-214;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842837.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000713;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000713;transcript_name=HG00140_ch_T0000713;gene_name=LINC00279;ID=intron:HG00140_ch_T0000713:1;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7464057	7464216	.	-	.	source_transcript=ENST00000842837.1;source_transcript_name=LINC00279-214;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842837.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000713;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000713;transcript_name=HG00140_ch_T0000713;gene_name=LINC00279;ID=exon:HG00140_ch_T0000713:2;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7464217	7466540	.	-	.	source_transcript=ENST00000842837.1;source_transcript_name=LINC00279-214;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842837.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000713;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000713;transcript_name=HG00140_ch_T0000713;gene_name=LINC00279;ID=intron:HG00140_ch_T0000713:2;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7466541	7466615	.	-	.	source_transcript=ENST00000842837.1;source_transcript_name=LINC00279-214;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842837.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000713;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000713;transcript_name=HG00140_ch_T0000713;gene_name=LINC00279;ID=exon:HG00140_ch_T0000713:3;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7466616	7511735	.	-	.	source_transcript=ENST00000842837.1;source_transcript_name=LINC00279-214;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842837.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000713;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000713;transcript_name=HG00140_ch_T0000713;gene_name=LINC00279;ID=intron:HG00140_ch_T0000713:3;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7511736	7512025	.	-	.	source_transcript=ENST00000842837.1;source_transcript_name=LINC00279-214;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842837.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000713;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000713;transcript_name=HG00140_ch_T0000713;gene_name=LINC00279;ID=exon:HG00140_ch_T0000713:4;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7462239	7467251	1000	-	.	source_transcript=ENST00000842841.1;source_transcript_name=LINC00279-218;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842841.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000715;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_G0000217;transcript_name=HG00140_ch_T0000715;gene_name=LINC00279;ID=HG00140_ch_T0000715;Name=LINC00279
HG00140_chrY	CAT	exon	7462239	7462625	.	-	.	source_transcript=ENST00000842841.1;source_transcript_name=LINC00279-218;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842841.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000715;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000715;transcript_name=HG00140_ch_T0000715;gene_name=LINC00279;ID=exon:HG00140_ch_T0000715:0;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7462626	7464056	.	-	.	source_transcript=ENST00000842841.1;source_transcript_name=LINC00279-218;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842841.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000715;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000715;transcript_name=HG00140_ch_T0000715;gene_name=LINC00279;ID=intron:HG00140_ch_T0000715:0;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7464057	7464216	.	-	.	source_transcript=ENST00000842841.1;source_transcript_name=LINC00279-218;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842841.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000715;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000715;transcript_name=HG00140_ch_T0000715;gene_name=LINC00279;ID=exon:HG00140_ch_T0000715:1;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7464217	7466540	.	-	.	source_transcript=ENST00000842841.1;source_transcript_name=LINC00279-218;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842841.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000715;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000715;transcript_name=HG00140_ch_T0000715;gene_name=LINC00279;ID=intron:HG00140_ch_T0000715:1;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7466541	7466615	.	-	.	source_transcript=ENST00000842841.1;source_transcript_name=LINC00279-218;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842841.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000715;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000715;transcript_name=HG00140_ch_T0000715;gene_name=LINC00279;ID=exon:HG00140_ch_T0000715:2;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7466616	7466886	.	-	.	source_transcript=ENST00000842841.1;source_transcript_name=LINC00279-218;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842841.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000715;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000715;transcript_name=HG00140_ch_T0000715;gene_name=LINC00279;ID=intron:HG00140_ch_T0000715:2;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7466887	7467251	.	-	.	source_transcript=ENST00000842841.1;source_transcript_name=LINC00279-218;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842841.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842841.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000715;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000715;transcript_name=HG00140_ch_T0000715;gene_name=LINC00279;ID=exon:HG00140_ch_T0000715:3;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7466213	7467244	1000	-	.	source_transcript=ENST00000842843.1;source_transcript_name=LINC00279-220;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842843.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000720;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_G0000217;transcript_name=HG00140_ch_T0000720;gene_name=LINC00279;ID=HG00140_ch_T0000720;Name=LINC00279
HG00140_chrY	CAT	exon	7466213	7466380	.	-	.	source_transcript=ENST00000842843.1;source_transcript_name=LINC00279-220;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000720;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000720;transcript_name=HG00140_ch_T0000720;gene_name=LINC00279;ID=exon:HG00140_ch_T0000720:0;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7466381	7466540	.	-	.	source_transcript=ENST00000842843.1;source_transcript_name=LINC00279-220;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000720;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000720;transcript_name=HG00140_ch_T0000720;gene_name=LINC00279;ID=intron:HG00140_ch_T0000720:0;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7466541	7466615	.	-	.	source_transcript=ENST00000842843.1;source_transcript_name=LINC00279-220;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000720;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000720;transcript_name=HG00140_ch_T0000720;gene_name=LINC00279;ID=exon:HG00140_ch_T0000720:1;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7466616	7466886	.	-	.	source_transcript=ENST00000842843.1;source_transcript_name=LINC00279-220;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000720;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000720;transcript_name=HG00140_ch_T0000720;gene_name=LINC00279;ID=intron:HG00140_ch_T0000720:1;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7466887	7467244	.	-	.	source_transcript=ENST00000842843.1;source_transcript_name=LINC00279-220;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842843.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842843.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000720;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000720;transcript_name=HG00140_ch_T0000720;gene_name=LINC00279;ID=exon:HG00140_ch_T0000720:2;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7478946	7561573	1000	-	.	source_transcript=ENST00000657784.1;source_transcript_name=LINC00279-208;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657784.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000731;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_G0000217;transcript_name=HG00140_ch_T0000731;gene_name=LINC00279;ID=HG00140_ch_T0000731;Name=LINC00279
HG00140_chrY	CAT	exon	7478946	7484470	.	-	.	source_transcript=ENST00000657784.1;source_transcript_name=LINC00279-208;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000731;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000731;transcript_name=HG00140_ch_T0000731;gene_name=LINC00279;ID=exon:HG00140_ch_T0000731:0;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7484471	7486939	.	-	.	source_transcript=ENST00000657784.1;source_transcript_name=LINC00279-208;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000731;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000731;transcript_name=HG00140_ch_T0000731;gene_name=LINC00279;ID=intron:HG00140_ch_T0000731:0;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7486940	7487012	.	-	.	source_transcript=ENST00000657784.1;source_transcript_name=LINC00279-208;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000731;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000731;transcript_name=HG00140_ch_T0000731;gene_name=LINC00279;ID=exon:HG00140_ch_T0000731:1;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7487013	7561378	.	-	.	source_transcript=ENST00000657784.1;source_transcript_name=LINC00279-208;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000731;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000731;transcript_name=HG00140_ch_T0000731;gene_name=LINC00279;ID=intron:HG00140_ch_T0000731:1;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7561379	7561573	.	-	.	source_transcript=ENST00000657784.1;source_transcript_name=LINC00279-208;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000731;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000731;transcript_name=HG00140_ch_T0000731;gene_name=LINC00279;ID=exon:HG00140_ch_T0000731:2;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7484256	7484997	1000	-	.	source_transcript=ENST00000842844.1;source_transcript_name=LINC00279-221;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842844.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000732;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_G0000217;transcript_name=HG00140_ch_T0000732;gene_name=LINC00279;ID=HG00140_ch_T0000732;Name=LINC00279
HG00140_chrY	CAT	exon	7484256	7484470	.	-	.	source_transcript=ENST00000842844.1;source_transcript_name=LINC00279-221;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000732;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000732;transcript_name=HG00140_ch_T0000732;gene_name=LINC00279;ID=exon:HG00140_ch_T0000732:0;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7484471	7484805	.	-	.	source_transcript=ENST00000842844.1;source_transcript_name=LINC00279-221;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000732;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000732;transcript_name=HG00140_ch_T0000732;gene_name=LINC00279;ID=intron:HG00140_ch_T0000732:0;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7484806	7484997	.	-	.	source_transcript=ENST00000842844.1;source_transcript_name=LINC00279-221;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842844.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842844.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000732;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000732;transcript_name=HG00140_ch_T0000732;gene_name=LINC00279;ID=exon:HG00140_ch_T0000732:1;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7494471	7561631	1000	-	.	source_transcript=ENST00000842834.1;source_transcript_name=LINC00279-211;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842834.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000733;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_G0000217;transcript_name=HG00140_ch_T0000733;gene_name=LINC00279;ID=HG00140_ch_T0000733;Name=LINC00279
HG00140_chrY	CAT	exon	7494471	7494808	.	-	.	source_transcript=ENST00000842834.1;source_transcript_name=LINC00279-211;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000733;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000733;transcript_name=HG00140_ch_T0000733;gene_name=LINC00279;ID=exon:HG00140_ch_T0000733:0;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7494809	7495384	.	-	.	source_transcript=ENST00000842834.1;source_transcript_name=LINC00279-211;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000733;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000733;transcript_name=HG00140_ch_T0000733;gene_name=LINC00279;ID=intron:HG00140_ch_T0000733:0;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7495385	7495534	.	-	.	source_transcript=ENST00000842834.1;source_transcript_name=LINC00279-211;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000733;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000733;transcript_name=HG00140_ch_T0000733;gene_name=LINC00279;ID=exon:HG00140_ch_T0000733:1;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7495535	7511735	.	-	.	source_transcript=ENST00000842834.1;source_transcript_name=LINC00279-211;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000733;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000733;transcript_name=HG00140_ch_T0000733;gene_name=LINC00279;ID=intron:HG00140_ch_T0000733:1;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7511736	7511958	.	-	.	source_transcript=ENST00000842834.1;source_transcript_name=LINC00279-211;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000733;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000733;transcript_name=HG00140_ch_T0000733;gene_name=LINC00279;ID=exon:HG00140_ch_T0000733:2;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7511959	7512418	.	-	.	source_transcript=ENST00000842834.1;source_transcript_name=LINC00279-211;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000733;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000733;transcript_name=HG00140_ch_T0000733;gene_name=LINC00279;ID=intron:HG00140_ch_T0000733:2;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7512419	7512505	.	-	.	source_transcript=ENST00000842834.1;source_transcript_name=LINC00279-211;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000733;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000733;transcript_name=HG00140_ch_T0000733;gene_name=LINC00279;ID=exon:HG00140_ch_T0000733:3;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7512506	7561378	.	-	.	source_transcript=ENST00000842834.1;source_transcript_name=LINC00279-211;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000733;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000733;transcript_name=HG00140_ch_T0000733;gene_name=LINC00279;ID=intron:HG00140_ch_T0000733:3;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7561379	7561631	.	-	.	source_transcript=ENST00000842834.1;source_transcript_name=LINC00279-211;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842834.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842834.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000733;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000733;transcript_name=HG00140_ch_T0000733;gene_name=LINC00279;ID=exon:HG00140_ch_T0000733:4;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7494471	7511973	1000	-	.	source_transcript=ENST00000842838.1;source_transcript_name=LINC00279-215;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842838.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000734;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_G0000217;transcript_name=HG00140_ch_T0000734;gene_name=LINC00279;ID=HG00140_ch_T0000734;Name=LINC00279
HG00140_chrY	CAT	exon	7494471	7494808	.	-	.	source_transcript=ENST00000842838.1;source_transcript_name=LINC00279-215;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842838.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000734;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000734;transcript_name=HG00140_ch_T0000734;gene_name=LINC00279;ID=exon:HG00140_ch_T0000734:0;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7494809	7495384	.	-	.	source_transcript=ENST00000842838.1;source_transcript_name=LINC00279-215;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842838.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000734;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000734;transcript_name=HG00140_ch_T0000734;gene_name=LINC00279;ID=intron:HG00140_ch_T0000734:0;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7495385	7495534	.	-	.	source_transcript=ENST00000842838.1;source_transcript_name=LINC00279-215;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842838.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000734;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000734;transcript_name=HG00140_ch_T0000734;gene_name=LINC00279;ID=exon:HG00140_ch_T0000734:1;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7495535	7511735	.	-	.	source_transcript=ENST00000842838.1;source_transcript_name=LINC00279-215;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842838.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000734;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000734;transcript_name=HG00140_ch_T0000734;gene_name=LINC00279;ID=intron:HG00140_ch_T0000734:1;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7511736	7511973	.	-	.	source_transcript=ENST00000842838.1;source_transcript_name=LINC00279-215;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842838.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000734;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000734;transcript_name=HG00140_ch_T0000734;gene_name=LINC00279;ID=exon:HG00140_ch_T0000734:2;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7494473	7561603	1000	-	.	source_transcript=ENST00000842835.1;source_transcript_name=LINC00279-212;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842835.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000735;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_G0000217;transcript_name=HG00140_ch_T0000735;gene_name=LINC00279;ID=HG00140_ch_T0000735;Name=LINC00279
HG00140_chrY	CAT	exon	7494473	7494808	.	-	.	source_transcript=ENST00000842835.1;source_transcript_name=LINC00279-212;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000735;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000735;transcript_name=HG00140_ch_T0000735;gene_name=LINC00279;ID=exon:HG00140_ch_T0000735:0;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7494809	7495384	.	-	.	source_transcript=ENST00000842835.1;source_transcript_name=LINC00279-212;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000735;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000735;transcript_name=HG00140_ch_T0000735;gene_name=LINC00279;ID=intron:HG00140_ch_T0000735:0;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7495385	7495534	.	-	.	source_transcript=ENST00000842835.1;source_transcript_name=LINC00279-212;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000735;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000735;transcript_name=HG00140_ch_T0000735;gene_name=LINC00279;ID=exon:HG00140_ch_T0000735:1;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7495535	7561378	.	-	.	source_transcript=ENST00000842835.1;source_transcript_name=LINC00279-212;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000735;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000735;transcript_name=HG00140_ch_T0000735;gene_name=LINC00279;ID=intron:HG00140_ch_T0000735:1;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7561379	7561603	.	-	.	source_transcript=ENST00000842835.1;source_transcript_name=LINC00279-212;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000735;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000735;transcript_name=HG00140_ch_T0000735;gene_name=LINC00279;ID=exon:HG00140_ch_T0000735:2;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7494474	7561592	1000	-	.	source_transcript=ENST00000842836.1;source_transcript_name=LINC00279-213;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842836.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000736;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_G0000217;transcript_name=HG00140_ch_T0000736;gene_name=LINC00279;ID=HG00140_ch_T0000736;Name=LINC00279
HG00140_chrY	CAT	exon	7494474	7494808	.	-	.	source_transcript=ENST00000842836.1;source_transcript_name=LINC00279-213;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000736;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000736;transcript_name=HG00140_ch_T0000736;gene_name=LINC00279;ID=exon:HG00140_ch_T0000736:0;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7494809	7495384	.	-	.	source_transcript=ENST00000842836.1;source_transcript_name=LINC00279-213;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000736;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000736;transcript_name=HG00140_ch_T0000736;gene_name=LINC00279;ID=intron:HG00140_ch_T0000736:0;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7495385	7495534	.	-	.	source_transcript=ENST00000842836.1;source_transcript_name=LINC00279-213;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000736;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000736;transcript_name=HG00140_ch_T0000736;gene_name=LINC00279;ID=exon:HG00140_ch_T0000736:1;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7495535	7561372	.	-	.	source_transcript=ENST00000842836.1;source_transcript_name=LINC00279-213;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000736;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000736;transcript_name=HG00140_ch_T0000736;gene_name=LINC00279;ID=intron:HG00140_ch_T0000736:1;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7561373	7561592	.	-	.	source_transcript=ENST00000842836.1;source_transcript_name=LINC00279-213;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842836.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842836.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000736;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000736;transcript_name=HG00140_ch_T0000736;gene_name=LINC00279;ID=exon:HG00140_ch_T0000736:2;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7494499	7545013	1000	-	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000737;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_G0000217;transcript_name=HG00140_ch_T0000737;gene_name=LINC00279;ID=HG00140_ch_T0000737;Name=LINC00279
HG00140_chrY	CAT	exon	7494499	7494808	.	-	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000737;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000737;transcript_name=HG00140_ch_T0000737;gene_name=LINC00279;ID=exon:HG00140_ch_T0000737:0;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7494809	7495384	.	-	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000737;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000737;transcript_name=HG00140_ch_T0000737;gene_name=LINC00279;ID=intron:HG00140_ch_T0000737:0;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7495385	7495534	.	-	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000737;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000737;transcript_name=HG00140_ch_T0000737;gene_name=LINC00279;ID=exon:HG00140_ch_T0000737:1;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7495535	7511735	.	-	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000737;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000737;transcript_name=HG00140_ch_T0000737;gene_name=LINC00279;ID=intron:HG00140_ch_T0000737:1;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7511736	7511958	.	-	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000737;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000737;transcript_name=HG00140_ch_T0000737;gene_name=LINC00279;ID=exon:HG00140_ch_T0000737:2;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7511959	7512418	.	-	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000737;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000737;transcript_name=HG00140_ch_T0000737;gene_name=LINC00279;ID=intron:HG00140_ch_T0000737:2;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7512419	7512505	.	-	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000737;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000737;transcript_name=HG00140_ch_T0000737;gene_name=LINC00279;ID=exon:HG00140_ch_T0000737:3;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7512506	7537738	.	-	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000737;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000737;transcript_name=HG00140_ch_T0000737;gene_name=LINC00279;ID=intron:HG00140_ch_T0000737:3;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7537739	7537825	.	-	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000737;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000737;transcript_name=HG00140_ch_T0000737;gene_name=LINC00279;ID=exon:HG00140_ch_T0000737:4;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7537826	7538032	.	-	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000737;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000737;transcript_name=HG00140_ch_T0000737;gene_name=LINC00279;ID=intron:HG00140_ch_T0000737:4;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7538033	7538105	.	-	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000737;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000737;transcript_name=HG00140_ch_T0000737;gene_name=LINC00279;ID=exon:HG00140_ch_T0000737:5;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7538106	7544035	.	-	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000737;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000737;transcript_name=HG00140_ch_T0000737;gene_name=LINC00279;ID=intron:HG00140_ch_T0000737:5;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7544036	7545013	.	-	.	source_transcript=ENST00000651793.1;source_transcript_name=LINC00279-206;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000737;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000737;transcript_name=HG00140_ch_T0000737;gene_name=LINC00279;ID=exon:HG00140_ch_T0000737:6;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7494565	7511882	1000	-	.	source_transcript=ENST00000652539.1;source_transcript_name=LINC00279-207;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652539.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652539.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000738;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_G0000217;transcript_name=HG00140_ch_T0000738;gene_name=LINC00279;ID=HG00140_ch_T0000738;Name=LINC00279
HG00140_chrY	CAT	exon	7494565	7494808	.	-	.	source_transcript=ENST00000652539.1;source_transcript_name=LINC00279-207;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652539.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652539.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000738;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000738;transcript_name=HG00140_ch_T0000738;gene_name=LINC00279;ID=exon:HG00140_ch_T0000738:0;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7494809	7495384	.	-	.	source_transcript=ENST00000652539.1;source_transcript_name=LINC00279-207;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652539.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652539.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000738;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000738;transcript_name=HG00140_ch_T0000738;gene_name=LINC00279;ID=intron:HG00140_ch_T0000738:0;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7495385	7495534	.	-	.	source_transcript=ENST00000652539.1;source_transcript_name=LINC00279-207;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652539.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652539.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000738;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000738;transcript_name=HG00140_ch_T0000738;gene_name=LINC00279;ID=exon:HG00140_ch_T0000738:1;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7495535	7500641	.	-	.	source_transcript=ENST00000652539.1;source_transcript_name=LINC00279-207;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652539.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652539.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000738;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000738;transcript_name=HG00140_ch_T0000738;gene_name=LINC00279;ID=intron:HG00140_ch_T0000738:1;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7500642	7500837	.	-	.	source_transcript=ENST00000652539.1;source_transcript_name=LINC00279-207;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652539.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652539.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000738;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000738;transcript_name=HG00140_ch_T0000738;gene_name=LINC00279;ID=exon:HG00140_ch_T0000738:2;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7500838	7505180	.	-	.	source_transcript=ENST00000652539.1;source_transcript_name=LINC00279-207;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652539.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652539.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000738;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000738;transcript_name=HG00140_ch_T0000738;gene_name=LINC00279;ID=intron:HG00140_ch_T0000738:2;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7505181	7505409	.	-	.	source_transcript=ENST00000652539.1;source_transcript_name=LINC00279-207;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652539.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652539.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000738;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000738;transcript_name=HG00140_ch_T0000738;gene_name=LINC00279;ID=exon:HG00140_ch_T0000738:3;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7505410	7511735	.	-	.	source_transcript=ENST00000652539.1;source_transcript_name=LINC00279-207;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652539.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652539.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000738;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000738;transcript_name=HG00140_ch_T0000738;gene_name=LINC00279;ID=intron:HG00140_ch_T0000738:3;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7511736	7511882	.	-	.	source_transcript=ENST00000652539.1;source_transcript_name=LINC00279-207;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652539.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652539.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000738;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000738;transcript_name=HG00140_ch_T0000738;gene_name=LINC00279;ID=exon:HG00140_ch_T0000738:4;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7500127	7506675	1000	-	.	source_transcript=ENST00000413486.2;source_transcript_name=LINC00279-201;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413486.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000413486.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000739;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_G0000217;transcript_name=HG00140_ch_T0000739;gene_name=LINC00279;ID=HG00140_ch_T0000739;Name=LINC00279
HG00140_chrY	CAT	exon	7500127	7500290	.	-	.	source_transcript=ENST00000413486.2;source_transcript_name=LINC00279-201;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413486.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000413486.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000739;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000739;transcript_name=HG00140_ch_T0000739;gene_name=LINC00279;ID=exon:HG00140_ch_T0000739:0;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7500291	7500641	.	-	.	source_transcript=ENST00000413486.2;source_transcript_name=LINC00279-201;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413486.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000413486.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000739;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000739;transcript_name=HG00140_ch_T0000739;gene_name=LINC00279;ID=intron:HG00140_ch_T0000739:0;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7500642	7500837	.	-	.	source_transcript=ENST00000413486.2;source_transcript_name=LINC00279-201;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413486.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000413486.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000739;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000739;transcript_name=HG00140_ch_T0000739;gene_name=LINC00279;ID=exon:HG00140_ch_T0000739:1;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7500838	7506562	.	-	.	source_transcript=ENST00000413486.2;source_transcript_name=LINC00279-201;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413486.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000413486.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000739;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000739;transcript_name=HG00140_ch_T0000739;gene_name=LINC00279;ID=intron:HG00140_ch_T0000739:1;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7506563	7506675	.	-	.	source_transcript=ENST00000413486.2;source_transcript_name=LINC00279-201;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413486.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000413486.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000739;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000739;transcript_name=HG00140_ch_T0000739;gene_name=LINC00279;ID=exon:HG00140_ch_T0000739:2;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7542529	7594564	1000	-	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000740;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_G0000217;transcript_name=HG00140_ch_T0000740;gene_name=LINC00279;ID=HG00140_ch_T0000740;Name=LINC00279
HG00140_chrY	CAT	exon	7542529	7543864	.	-	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000740;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000740;transcript_name=HG00140_ch_T0000740;gene_name=LINC00279;ID=exon:HG00140_ch_T0000740:0;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7543865	7544035	.	-	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000740;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000740;transcript_name=HG00140_ch_T0000740;gene_name=LINC00279;ID=intron:HG00140_ch_T0000740:0;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7544036	7544143	.	-	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000740;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000740;transcript_name=HG00140_ch_T0000740;gene_name=LINC00279;ID=exon:HG00140_ch_T0000740:1;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7544144	7544355	.	-	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000740;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000740;transcript_name=HG00140_ch_T0000740;gene_name=LINC00279;ID=intron:HG00140_ch_T0000740:1;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7544356	7544436	.	-	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000740;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000740;transcript_name=HG00140_ch_T0000740;gene_name=LINC00279;ID=exon:HG00140_ch_T0000740:2;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7544437	7547363	.	-	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000740;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000740;transcript_name=HG00140_ch_T0000740;gene_name=LINC00279;ID=intron:HG00140_ch_T0000740:2;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7547364	7547523	.	-	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000740;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000740;transcript_name=HG00140_ch_T0000740;gene_name=LINC00279;ID=exon:HG00140_ch_T0000740:3;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7547524	7547874	.	-	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000740;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000740;transcript_name=HG00140_ch_T0000740;gene_name=LINC00279;ID=intron:HG00140_ch_T0000740:3;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7547875	7547968	.	-	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000740;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000740;transcript_name=HG00140_ch_T0000740;gene_name=LINC00279;ID=exon:HG00140_ch_T0000740:4;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7547969	7548193	.	-	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000740;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000740;transcript_name=HG00140_ch_T0000740;gene_name=LINC00279;ID=intron:HG00140_ch_T0000740:4;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7548194	7548274	.	-	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000740;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000740;transcript_name=HG00140_ch_T0000740;gene_name=LINC00279;ID=exon:HG00140_ch_T0000740:5;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7548275	7549621	.	-	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000740;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000740;transcript_name=HG00140_ch_T0000740;gene_name=LINC00279;ID=intron:HG00140_ch_T0000740:5;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7549622	7549861	.	-	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000740;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000740;transcript_name=HG00140_ch_T0000740;gene_name=LINC00279;ID=exon:HG00140_ch_T0000740:6;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7549862	7559819	.	-	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000740;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000740;transcript_name=HG00140_ch_T0000740;gene_name=LINC00279;ID=intron:HG00140_ch_T0000740:6;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7559820	7559870	.	-	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000740;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000740;transcript_name=HG00140_ch_T0000740;gene_name=LINC00279;ID=exon:HG00140_ch_T0000740:7;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7559871	7561378	.	-	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000740;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000740;transcript_name=HG00140_ch_T0000740;gene_name=LINC00279;ID=intron:HG00140_ch_T0000740:7;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7561379	7561494	.	-	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000740;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000740;transcript_name=HG00140_ch_T0000740;gene_name=LINC00279;ID=exon:HG00140_ch_T0000740:8;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7561495	7563261	.	-	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000740;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000740;transcript_name=HG00140_ch_T0000740;gene_name=LINC00279;ID=intron:HG00140_ch_T0000740:8;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7563262	7563425	.	-	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000740;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000740;transcript_name=HG00140_ch_T0000740;gene_name=LINC00279;ID=exon:HG00140_ch_T0000740:9;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7563426	7582789	.	-	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000740;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000740;transcript_name=HG00140_ch_T0000740;gene_name=LINC00279;ID=intron:HG00140_ch_T0000740:9;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7582790	7583024	.	-	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000740;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000740;transcript_name=HG00140_ch_T0000740;gene_name=LINC00279;ID=exon:HG00140_ch_T0000740:10;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7583025	7583918	.	-	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000740;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000740;transcript_name=HG00140_ch_T0000740;gene_name=LINC00279;ID=intron:HG00140_ch_T0000740:10;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7583919	7583996	.	-	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000740;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000740;transcript_name=HG00140_ch_T0000740;gene_name=LINC00279;ID=exon:HG00140_ch_T0000740:11;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7583997	7584565	.	-	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000740;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000740;transcript_name=HG00140_ch_T0000740;gene_name=LINC00279;ID=intron:HG00140_ch_T0000740:11;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7584566	7584685	.	-	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000740;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000740;transcript_name=HG00140_ch_T0000740;gene_name=LINC00279;ID=exon:HG00140_ch_T0000740:12;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7584686	7585536	.	-	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000740;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000740;transcript_name=HG00140_ch_T0000740;gene_name=LINC00279;ID=intron:HG00140_ch_T0000740:12;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7585537	7585644	.	-	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000740;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000740;transcript_name=HG00140_ch_T0000740;gene_name=LINC00279;ID=exon:HG00140_ch_T0000740:13;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7585645	7594476	.	-	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000740;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000740;transcript_name=HG00140_ch_T0000740;gene_name=LINC00279;ID=intron:HG00140_ch_T0000740:13;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7594477	7594564	.	-	.	source_transcript=ENST00000651511.1;source_transcript_name=LINC00279-204;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651511.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651511.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000740;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000740;transcript_name=HG00140_ch_T0000740;gene_name=LINC00279;ID=exon:HG00140_ch_T0000740:14;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7547272	7561453	1000	-	.	source_transcript=ENST00000650791.1;source_transcript_name=LINC00279-202;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650791.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000741;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_G0000217;transcript_name=HG00140_ch_T0000741;gene_name=LINC00279;ID=HG00140_ch_T0000741;Name=LINC00279
HG00140_chrY	CAT	exon	7547272	7547523	.	-	.	source_transcript=ENST00000650791.1;source_transcript_name=LINC00279-202;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000741;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000741;transcript_name=HG00140_ch_T0000741;gene_name=LINC00279;ID=exon:HG00140_ch_T0000741:0;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7547524	7549621	.	-	.	source_transcript=ENST00000650791.1;source_transcript_name=LINC00279-202;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000741;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000741;transcript_name=HG00140_ch_T0000741;gene_name=LINC00279;ID=intron:HG00140_ch_T0000741:0;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7549622	7549861	.	-	.	source_transcript=ENST00000650791.1;source_transcript_name=LINC00279-202;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000741;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000741;transcript_name=HG00140_ch_T0000741;gene_name=LINC00279;ID=exon:HG00140_ch_T0000741:1;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7549862	7559819	.	-	.	source_transcript=ENST00000650791.1;source_transcript_name=LINC00279-202;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000741;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000741;transcript_name=HG00140_ch_T0000741;gene_name=LINC00279;ID=intron:HG00140_ch_T0000741:1;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7559820	7559870	.	-	.	source_transcript=ENST00000650791.1;source_transcript_name=LINC00279-202;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000741;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000741;transcript_name=HG00140_ch_T0000741;gene_name=LINC00279;ID=exon:HG00140_ch_T0000741:2;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7559871	7561372	.	-	.	source_transcript=ENST00000650791.1;source_transcript_name=LINC00279-202;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000741;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000741;transcript_name=HG00140_ch_T0000741;gene_name=LINC00279;ID=intron:HG00140_ch_T0000741:2;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7561373	7561453	.	-	.	source_transcript=ENST00000650791.1;source_transcript_name=LINC00279-202;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000741;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000741;transcript_name=HG00140_ch_T0000741;gene_name=LINC00279;ID=exon:HG00140_ch_T0000741:3;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7549019	7561603	1000	-	.	source_transcript=ENST00000842839.1;source_transcript_name=LINC00279-216;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842839.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000742;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_G0000217;transcript_name=HG00140_ch_T0000742;gene_name=LINC00279;ID=HG00140_ch_T0000742;Name=LINC00279
HG00140_chrY	CAT	exon	7549019	7549883	.	-	.	source_transcript=ENST00000842839.1;source_transcript_name=LINC00279-216;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000742;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000742;transcript_name=HG00140_ch_T0000742;gene_name=LINC00279;ID=exon:HG00140_ch_T0000742:0;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7549884	7561372	.	-	.	source_transcript=ENST00000842839.1;source_transcript_name=LINC00279-216;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000742;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000742;transcript_name=HG00140_ch_T0000742;gene_name=LINC00279;ID=intron:HG00140_ch_T0000742:0;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7561373	7561603	.	-	.	source_transcript=ENST00000842839.1;source_transcript_name=LINC00279-216;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000842839.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000842839.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000742;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000742;transcript_name=HG00140_ch_T0000742;gene_name=LINC00279;ID=exon:HG00140_ch_T0000742:1;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7584154	7594588	1000	-	.	source_transcript=ENST00000767031.1;source_transcript_name=LINC00279-209;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000767031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000767031.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000743;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_G0000217;transcript_name=HG00140_ch_T0000743;gene_name=LINC00279;ID=HG00140_ch_T0000743;Name=LINC00279
HG00140_chrY	CAT	exon	7584154	7584685	.	-	.	source_transcript=ENST00000767031.1;source_transcript_name=LINC00279-209;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000767031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000767031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000743;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000743;transcript_name=HG00140_ch_T0000743;gene_name=LINC00279;ID=exon:HG00140_ch_T0000743:0;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7584686	7585536	.	-	.	source_transcript=ENST00000767031.1;source_transcript_name=LINC00279-209;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000767031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000767031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000743;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000743;transcript_name=HG00140_ch_T0000743;gene_name=LINC00279;ID=intron:HG00140_ch_T0000743:0;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7585537	7585644	.	-	.	source_transcript=ENST00000767031.1;source_transcript_name=LINC00279-209;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000767031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000767031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000743;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000743;transcript_name=HG00140_ch_T0000743;gene_name=LINC00279;ID=exon:HG00140_ch_T0000743:1;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7585645	7594476	.	-	.	source_transcript=ENST00000767031.1;source_transcript_name=LINC00279-209;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000767031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000767031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000743;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000743;transcript_name=HG00140_ch_T0000743;gene_name=LINC00279;ID=intron:HG00140_ch_T0000743:1;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7594477	7594588	.	-	.	source_transcript=ENST00000767031.1;source_transcript_name=LINC00279-209;source_gene=ENSG00000286217.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286217.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000767031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000767031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;transcript_id=HG00140_ch_T0000743;gene_id=HG00140_ch_G0000217;Parent=HG00140_ch_T0000743;transcript_name=HG00140_ch_T0000743;gene_name=LINC00279;ID=exon:HG00140_ch_T0000743:2;Name=LINC00279;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	7434028	7462378	.	+	.	source_gene_common_name=TTTY18;source_gene=ENSG00000233699.3;alternative_source_transcripts=ENST00000843019.1,ENST00000843019.1;gene_id=HG00140_ch_G0000218;gene_biotype=lncRNA;gene_name=TTTY18;gene_sources=liftoff;ID=HG00140_ch_G0000218;Name=TTTY18
HG00140_chrY	CAT	transcript	7434028	7440853	1000	+	.	source_transcript=ENST00000843019.1;source_transcript_name=TTTY18-209;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843019.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843019.1,ENST00000843019.1;transcript_id=HG00140_ch_T0000697;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_G0000218;transcript_name=HG00140_ch_T0000697;gene_name=TTTY18;ID=HG00140_ch_T0000697;Name=TTTY18
HG00140_chrY	CAT	exon	7434028	7434234	.	+	.	source_transcript=ENST00000843019.1;source_transcript_name=TTTY18-209;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843019.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843019.1,ENST00000843019.1;transcript_id=HG00140_ch_T0000697;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000697;transcript_name=HG00140_ch_T0000697;gene_name=TTTY18;ID=exon:HG00140_ch_T0000697:0;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7434235	7440705	.	+	.	source_transcript=ENST00000843019.1;source_transcript_name=TTTY18-209;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843019.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843019.1,ENST00000843019.1;transcript_id=HG00140_ch_T0000697;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000697;transcript_name=HG00140_ch_T0000697;gene_name=TTTY18;ID=intron:HG00140_ch_T0000697:0;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7440706	7440853	.	+	.	source_transcript=ENST00000843019.1;source_transcript_name=TTTY18-209;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843019.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843019.1,ENST00000843019.1;transcript_id=HG00140_ch_T0000697;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000697;transcript_name=HG00140_ch_T0000697;gene_name=TTTY18;ID=exon:HG00140_ch_T0000697:1;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7434047	7451645	1000	+	.	source_transcript=ENST00000843013.1;source_transcript_name=TTTY18-203;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843013.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843013.1,ENST00000843013.1;transcript_id=HG00140_ch_T0000698;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_G0000218;transcript_name=HG00140_ch_T0000698;gene_name=TTTY18;ID=HG00140_ch_T0000698;Name=TTTY18
HG00140_chrY	CAT	exon	7434047	7434234	.	+	.	source_transcript=ENST00000843013.1;source_transcript_name=TTTY18-203;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843013.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843013.1,ENST00000843013.1;transcript_id=HG00140_ch_T0000698;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000698;transcript_name=HG00140_ch_T0000698;gene_name=TTTY18;ID=exon:HG00140_ch_T0000698:0;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7434235	7449628	.	+	.	source_transcript=ENST00000843013.1;source_transcript_name=TTTY18-203;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843013.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843013.1,ENST00000843013.1;transcript_id=HG00140_ch_T0000698;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000698;transcript_name=HG00140_ch_T0000698;gene_name=TTTY18;ID=intron:HG00140_ch_T0000698:0;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7449629	7449845	.	+	.	source_transcript=ENST00000843013.1;source_transcript_name=TTTY18-203;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843013.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843013.1,ENST00000843013.1;transcript_id=HG00140_ch_T0000698;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000698;transcript_name=HG00140_ch_T0000698;gene_name=TTTY18;ID=exon:HG00140_ch_T0000698:1;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7449846	7450426	.	+	.	source_transcript=ENST00000843013.1;source_transcript_name=TTTY18-203;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843013.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843013.1,ENST00000843013.1;transcript_id=HG00140_ch_T0000698;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000698;transcript_name=HG00140_ch_T0000698;gene_name=TTTY18;ID=intron:HG00140_ch_T0000698:1;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7450427	7450504	.	+	.	source_transcript=ENST00000843013.1;source_transcript_name=TTTY18-203;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843013.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843013.1,ENST00000843013.1;transcript_id=HG00140_ch_T0000698;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000698;transcript_name=HG00140_ch_T0000698;gene_name=TTTY18;ID=exon:HG00140_ch_T0000698:2;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7450505	7450988	.	+	.	source_transcript=ENST00000843013.1;source_transcript_name=TTTY18-203;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843013.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843013.1,ENST00000843013.1;transcript_id=HG00140_ch_T0000698;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000698;transcript_name=HG00140_ch_T0000698;gene_name=TTTY18;ID=intron:HG00140_ch_T0000698:2;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7450989	7451194	.	+	.	source_transcript=ENST00000843013.1;source_transcript_name=TTTY18-203;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843013.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843013.1,ENST00000843013.1;transcript_id=HG00140_ch_T0000698;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000698;transcript_name=HG00140_ch_T0000698;gene_name=TTTY18;ID=exon:HG00140_ch_T0000698:3;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7451195	7451556	.	+	.	source_transcript=ENST00000843013.1;source_transcript_name=TTTY18-203;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843013.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843013.1,ENST00000843013.1;transcript_id=HG00140_ch_T0000698;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000698;transcript_name=HG00140_ch_T0000698;gene_name=TTTY18;ID=intron:HG00140_ch_T0000698:3;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7451557	7451645	.	+	.	source_transcript=ENST00000843013.1;source_transcript_name=TTTY18-203;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843013.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843013.1,ENST00000843013.1;transcript_id=HG00140_ch_T0000698;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000698;transcript_name=HG00140_ch_T0000698;gene_name=TTTY18;ID=exon:HG00140_ch_T0000698:4;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7434062	7461847	1000	+	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=HG00140_ch_T0000699;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_G0000218;transcript_name=HG00140_ch_T0000699;gene_name=TTTY18;ID=HG00140_ch_T0000699;Name=TTTY18
HG00140_chrY	CAT	exon	7434062	7434234	.	+	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=HG00140_ch_T0000699;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000699;transcript_name=HG00140_ch_T0000699;gene_name=TTTY18;ID=exon:HG00140_ch_T0000699:0;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7434235	7450426	.	+	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=HG00140_ch_T0000699;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000699;transcript_name=HG00140_ch_T0000699;gene_name=TTTY18;ID=intron:HG00140_ch_T0000699:0;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7450427	7450504	.	+	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=HG00140_ch_T0000699;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000699;transcript_name=HG00140_ch_T0000699;gene_name=TTTY18;ID=exon:HG00140_ch_T0000699:1;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7450505	7450988	.	+	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=HG00140_ch_T0000699;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000699;transcript_name=HG00140_ch_T0000699;gene_name=TTTY18;ID=intron:HG00140_ch_T0000699:1;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7450989	7451194	.	+	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=HG00140_ch_T0000699;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000699;transcript_name=HG00140_ch_T0000699;gene_name=TTTY18;ID=exon:HG00140_ch_T0000699:2;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7451195	7458234	.	+	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=HG00140_ch_T0000699;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000699;transcript_name=HG00140_ch_T0000699;gene_name=TTTY18;ID=intron:HG00140_ch_T0000699:2;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7458235	7458289	.	+	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=HG00140_ch_T0000699;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000699;transcript_name=HG00140_ch_T0000699;gene_name=TTTY18;ID=exon:HG00140_ch_T0000699:3;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7458290	7461032	.	+	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=HG00140_ch_T0000699;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000699;transcript_name=HG00140_ch_T0000699;gene_name=TTTY18;ID=intron:HG00140_ch_T0000699:3;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7461033	7461251	.	+	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=HG00140_ch_T0000699;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000699;transcript_name=HG00140_ch_T0000699;gene_name=TTTY18;ID=exon:HG00140_ch_T0000699:4;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7461252	7461539	.	+	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=HG00140_ch_T0000699;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000699;transcript_name=HG00140_ch_T0000699;gene_name=TTTY18;ID=intron:HG00140_ch_T0000699:4;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7461540	7461847	.	+	.	source_transcript=ENST00000843012.1;source_transcript_name=TTTY18-202;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843012.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843012.1,ENST00000843012.1;transcript_id=HG00140_ch_T0000699;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000699;transcript_name=HG00140_ch_T0000699;gene_name=TTTY18;ID=exon:HG00140_ch_T0000699:5;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7443973	7462378	1000	+	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=HG00140_ch_T0000701;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_G0000218;transcript_name=HG00140_ch_T0000701;gene_name=TTTY18;ID=HG00140_ch_T0000701;Name=TTTY18
HG00140_chrY	CAT	exon	7443973	7444132	.	+	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=HG00140_ch_T0000701;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000701;transcript_name=HG00140_ch_T0000701;gene_name=TTTY18;ID=exon:HG00140_ch_T0000701:0;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7444133	7450426	.	+	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=HG00140_ch_T0000701;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000701;transcript_name=HG00140_ch_T0000701;gene_name=TTTY18;ID=intron:HG00140_ch_T0000701:0;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7450427	7450504	.	+	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=HG00140_ch_T0000701;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000701;transcript_name=HG00140_ch_T0000701;gene_name=TTTY18;ID=exon:HG00140_ch_T0000701:1;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7450505	7450988	.	+	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=HG00140_ch_T0000701;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000701;transcript_name=HG00140_ch_T0000701;gene_name=TTTY18;ID=intron:HG00140_ch_T0000701:1;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7450989	7451194	.	+	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=HG00140_ch_T0000701;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000701;transcript_name=HG00140_ch_T0000701;gene_name=TTTY18;ID=exon:HG00140_ch_T0000701:2;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7451195	7455809	.	+	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=HG00140_ch_T0000701;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000701;transcript_name=HG00140_ch_T0000701;gene_name=TTTY18;ID=intron:HG00140_ch_T0000701:2;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7455810	7455894	.	+	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=HG00140_ch_T0000701;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000701;transcript_name=HG00140_ch_T0000701;gene_name=TTTY18;ID=exon:HG00140_ch_T0000701:3;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7455895	7458234	.	+	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=HG00140_ch_T0000701;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000701;transcript_name=HG00140_ch_T0000701;gene_name=TTTY18;ID=intron:HG00140_ch_T0000701:3;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7458235	7458289	.	+	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=HG00140_ch_T0000701;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000701;transcript_name=HG00140_ch_T0000701;gene_name=TTTY18;ID=exon:HG00140_ch_T0000701:4;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7458290	7461032	.	+	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=HG00140_ch_T0000701;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000701;transcript_name=HG00140_ch_T0000701;gene_name=TTTY18;ID=intron:HG00140_ch_T0000701:4;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7461033	7461251	.	+	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=HG00140_ch_T0000701;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000701;transcript_name=HG00140_ch_T0000701;gene_name=TTTY18;ID=exon:HG00140_ch_T0000701:5;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7461252	7461539	.	+	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=HG00140_ch_T0000701;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000701;transcript_name=HG00140_ch_T0000701;gene_name=TTTY18;ID=intron:HG00140_ch_T0000701:5;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7461540	7462378	.	+	.	source_transcript=ENST00000438677.2;source_transcript_name=TTTY18-201;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000438677.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000438677.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000438677.2,ENST00000438677.2;transcript_id=HG00140_ch_T0000701;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000701;transcript_name=HG00140_ch_T0000701;gene_name=TTTY18;ID=exon:HG00140_ch_T0000701:6;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7449636	7457784	1000	+	.	source_transcript=ENST00000843018.1;source_transcript_name=TTTY18-208;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843018.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843018.1,ENST00000843018.1;transcript_id=HG00140_ch_T0000702;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_G0000218;transcript_name=HG00140_ch_T0000702;gene_name=TTTY18;ID=HG00140_ch_T0000702;Name=TTTY18
HG00140_chrY	CAT	exon	7449636	7449845	.	+	.	source_transcript=ENST00000843018.1;source_transcript_name=TTTY18-208;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843018.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843018.1,ENST00000843018.1;transcript_id=HG00140_ch_T0000702;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000702;transcript_name=HG00140_ch_T0000702;gene_name=TTTY18;ID=exon:HG00140_ch_T0000702:0;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7449846	7450426	.	+	.	source_transcript=ENST00000843018.1;source_transcript_name=TTTY18-208;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843018.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843018.1,ENST00000843018.1;transcript_id=HG00140_ch_T0000702;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000702;transcript_name=HG00140_ch_T0000702;gene_name=TTTY18;ID=intron:HG00140_ch_T0000702:0;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7450427	7450504	.	+	.	source_transcript=ENST00000843018.1;source_transcript_name=TTTY18-208;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843018.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843018.1,ENST00000843018.1;transcript_id=HG00140_ch_T0000702;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000702;transcript_name=HG00140_ch_T0000702;gene_name=TTTY18;ID=exon:HG00140_ch_T0000702:1;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7450505	7450988	.	+	.	source_transcript=ENST00000843018.1;source_transcript_name=TTTY18-208;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843018.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843018.1,ENST00000843018.1;transcript_id=HG00140_ch_T0000702;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000702;transcript_name=HG00140_ch_T0000702;gene_name=TTTY18;ID=intron:HG00140_ch_T0000702:1;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7450989	7451194	.	+	.	source_transcript=ENST00000843018.1;source_transcript_name=TTTY18-208;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843018.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843018.1,ENST00000843018.1;transcript_id=HG00140_ch_T0000702;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000702;transcript_name=HG00140_ch_T0000702;gene_name=TTTY18;ID=exon:HG00140_ch_T0000702:2;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7451195	7455809	.	+	.	source_transcript=ENST00000843018.1;source_transcript_name=TTTY18-208;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843018.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843018.1,ENST00000843018.1;transcript_id=HG00140_ch_T0000702;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000702;transcript_name=HG00140_ch_T0000702;gene_name=TTTY18;ID=intron:HG00140_ch_T0000702:2;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7455810	7455894	.	+	.	source_transcript=ENST00000843018.1;source_transcript_name=TTTY18-208;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843018.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843018.1,ENST00000843018.1;transcript_id=HG00140_ch_T0000702;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000702;transcript_name=HG00140_ch_T0000702;gene_name=TTTY18;ID=exon:HG00140_ch_T0000702:3;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7455895	7457605	.	+	.	source_transcript=ENST00000843018.1;source_transcript_name=TTTY18-208;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843018.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843018.1,ENST00000843018.1;transcript_id=HG00140_ch_T0000702;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000702;transcript_name=HG00140_ch_T0000702;gene_name=TTTY18;ID=intron:HG00140_ch_T0000702:3;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7457606	7457784	.	+	.	source_transcript=ENST00000843018.1;source_transcript_name=TTTY18-208;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843018.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843018.1,ENST00000843018.1;transcript_id=HG00140_ch_T0000702;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000702;transcript_name=HG00140_ch_T0000702;gene_name=TTTY18;ID=exon:HG00140_ch_T0000702:4;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7453491	7462375	1000	+	.	source_transcript=ENST00000843014.1;source_transcript_name=TTTY18-204;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843014.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843014.1,ENST00000843014.1;transcript_id=HG00140_ch_T0000704;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_G0000218;transcript_name=HG00140_ch_T0000704;gene_name=TTTY18;ID=HG00140_ch_T0000704;Name=TTTY18
HG00140_chrY	CAT	exon	7453491	7453700	.	+	.	source_transcript=ENST00000843014.1;source_transcript_name=TTTY18-204;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843014.1,ENST00000843014.1;transcript_id=HG00140_ch_T0000704;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000704;transcript_name=HG00140_ch_T0000704;gene_name=TTTY18;ID=exon:HG00140_ch_T0000704:0;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7453701	7455809	.	+	.	source_transcript=ENST00000843014.1;source_transcript_name=TTTY18-204;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843014.1,ENST00000843014.1;transcript_id=HG00140_ch_T0000704;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000704;transcript_name=HG00140_ch_T0000704;gene_name=TTTY18;ID=intron:HG00140_ch_T0000704:0;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7455810	7455894	.	+	.	source_transcript=ENST00000843014.1;source_transcript_name=TTTY18-204;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843014.1,ENST00000843014.1;transcript_id=HG00140_ch_T0000704;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000704;transcript_name=HG00140_ch_T0000704;gene_name=TTTY18;ID=exon:HG00140_ch_T0000704:1;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7455895	7458234	.	+	.	source_transcript=ENST00000843014.1;source_transcript_name=TTTY18-204;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843014.1,ENST00000843014.1;transcript_id=HG00140_ch_T0000704;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000704;transcript_name=HG00140_ch_T0000704;gene_name=TTTY18;ID=intron:HG00140_ch_T0000704:1;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7458235	7458289	.	+	.	source_transcript=ENST00000843014.1;source_transcript_name=TTTY18-204;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843014.1,ENST00000843014.1;transcript_id=HG00140_ch_T0000704;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000704;transcript_name=HG00140_ch_T0000704;gene_name=TTTY18;ID=exon:HG00140_ch_T0000704:2;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7458290	7461032	.	+	.	source_transcript=ENST00000843014.1;source_transcript_name=TTTY18-204;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843014.1,ENST00000843014.1;transcript_id=HG00140_ch_T0000704;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000704;transcript_name=HG00140_ch_T0000704;gene_name=TTTY18;ID=intron:HG00140_ch_T0000704:2;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7461033	7461251	.	+	.	source_transcript=ENST00000843014.1;source_transcript_name=TTTY18-204;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843014.1,ENST00000843014.1;transcript_id=HG00140_ch_T0000704;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000704;transcript_name=HG00140_ch_T0000704;gene_name=TTTY18;ID=exon:HG00140_ch_T0000704:3;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7461252	7461539	.	+	.	source_transcript=ENST00000843014.1;source_transcript_name=TTTY18-204;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843014.1,ENST00000843014.1;transcript_id=HG00140_ch_T0000704;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000704;transcript_name=HG00140_ch_T0000704;gene_name=TTTY18;ID=intron:HG00140_ch_T0000704:3;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7461540	7462375	.	+	.	source_transcript=ENST00000843014.1;source_transcript_name=TTTY18-204;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843014.1,ENST00000843014.1;transcript_id=HG00140_ch_T0000704;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000704;transcript_name=HG00140_ch_T0000704;gene_name=TTTY18;ID=exon:HG00140_ch_T0000704:4;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7453491	7461853	1000	+	.	source_transcript=ENST00000843015.1;source_transcript_name=TTTY18-205;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843015.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843015.1,ENST00000843015.1;transcript_id=HG00140_ch_T0000705;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_G0000218;transcript_name=HG00140_ch_T0000705;gene_name=TTTY18;ID=HG00140_ch_T0000705;Name=TTTY18
HG00140_chrY	CAT	exon	7453491	7453700	.	+	.	source_transcript=ENST00000843015.1;source_transcript_name=TTTY18-205;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843015.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843015.1,ENST00000843015.1;transcript_id=HG00140_ch_T0000705;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000705;transcript_name=HG00140_ch_T0000705;gene_name=TTTY18;ID=exon:HG00140_ch_T0000705:0;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7453701	7458234	.	+	.	source_transcript=ENST00000843015.1;source_transcript_name=TTTY18-205;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843015.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843015.1,ENST00000843015.1;transcript_id=HG00140_ch_T0000705;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000705;transcript_name=HG00140_ch_T0000705;gene_name=TTTY18;ID=intron:HG00140_ch_T0000705:0;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7458235	7458289	.	+	.	source_transcript=ENST00000843015.1;source_transcript_name=TTTY18-205;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843015.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843015.1,ENST00000843015.1;transcript_id=HG00140_ch_T0000705;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000705;transcript_name=HG00140_ch_T0000705;gene_name=TTTY18;ID=exon:HG00140_ch_T0000705:1;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7458290	7461032	.	+	.	source_transcript=ENST00000843015.1;source_transcript_name=TTTY18-205;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843015.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843015.1,ENST00000843015.1;transcript_id=HG00140_ch_T0000705;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000705;transcript_name=HG00140_ch_T0000705;gene_name=TTTY18;ID=intron:HG00140_ch_T0000705:1;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7461033	7461251	.	+	.	source_transcript=ENST00000843015.1;source_transcript_name=TTTY18-205;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843015.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843015.1,ENST00000843015.1;transcript_id=HG00140_ch_T0000705;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000705;transcript_name=HG00140_ch_T0000705;gene_name=TTTY18;ID=exon:HG00140_ch_T0000705:2;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7461252	7461539	.	+	.	source_transcript=ENST00000843015.1;source_transcript_name=TTTY18-205;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843015.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843015.1,ENST00000843015.1;transcript_id=HG00140_ch_T0000705;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000705;transcript_name=HG00140_ch_T0000705;gene_name=TTTY18;ID=intron:HG00140_ch_T0000705:2;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7461540	7461853	.	+	.	source_transcript=ENST00000843015.1;source_transcript_name=TTTY18-205;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843015.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843015.1,ENST00000843015.1;transcript_id=HG00140_ch_T0000705;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000705;transcript_name=HG00140_ch_T0000705;gene_name=TTTY18;ID=exon:HG00140_ch_T0000705:3;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7453492	7457786	1000	+	.	source_transcript=ENST00000843020.1;source_transcript_name=TTTY18-210;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843020.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843020.1,ENST00000843020.1;transcript_id=HG00140_ch_T0000706;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_G0000218;transcript_name=HG00140_ch_T0000706;gene_name=TTTY18;ID=HG00140_ch_T0000706;Name=TTTY18
HG00140_chrY	CAT	exon	7453492	7453700	.	+	.	source_transcript=ENST00000843020.1;source_transcript_name=TTTY18-210;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843020.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843020.1,ENST00000843020.1;transcript_id=HG00140_ch_T0000706;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000706;transcript_name=HG00140_ch_T0000706;gene_name=TTTY18;ID=exon:HG00140_ch_T0000706:0;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7453701	7455809	.	+	.	source_transcript=ENST00000843020.1;source_transcript_name=TTTY18-210;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843020.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843020.1,ENST00000843020.1;transcript_id=HG00140_ch_T0000706;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000706;transcript_name=HG00140_ch_T0000706;gene_name=TTTY18;ID=intron:HG00140_ch_T0000706:0;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7455810	7455894	.	+	.	source_transcript=ENST00000843020.1;source_transcript_name=TTTY18-210;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843020.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843020.1,ENST00000843020.1;transcript_id=HG00140_ch_T0000706;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000706;transcript_name=HG00140_ch_T0000706;gene_name=TTTY18;ID=exon:HG00140_ch_T0000706:1;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7455895	7457538	.	+	.	source_transcript=ENST00000843020.1;source_transcript_name=TTTY18-210;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843020.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843020.1,ENST00000843020.1;transcript_id=HG00140_ch_T0000706;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000706;transcript_name=HG00140_ch_T0000706;gene_name=TTTY18;ID=intron:HG00140_ch_T0000706:1;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7457539	7457786	.	+	.	source_transcript=ENST00000843020.1;source_transcript_name=TTTY18-210;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843020.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843020.1,ENST00000843020.1;transcript_id=HG00140_ch_T0000706;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000706;transcript_name=HG00140_ch_T0000706;gene_name=TTTY18;ID=exon:HG00140_ch_T0000706:2;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7453495	7457787	1000	+	.	source_transcript=ENST00000843021.1;source_transcript_name=TTTY18-211;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843021.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843021.1,ENST00000843021.1;transcript_id=HG00140_ch_T0000707;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_G0000218;transcript_name=HG00140_ch_T0000707;gene_name=TTTY18;ID=HG00140_ch_T0000707;Name=TTTY18
HG00140_chrY	CAT	exon	7453495	7453700	.	+	.	source_transcript=ENST00000843021.1;source_transcript_name=TTTY18-211;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843021.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843021.1,ENST00000843021.1;transcript_id=HG00140_ch_T0000707;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000707;transcript_name=HG00140_ch_T0000707;gene_name=TTTY18;ID=exon:HG00140_ch_T0000707:0;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7453701	7455809	.	+	.	source_transcript=ENST00000843021.1;source_transcript_name=TTTY18-211;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843021.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843021.1,ENST00000843021.1;transcript_id=HG00140_ch_T0000707;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000707;transcript_name=HG00140_ch_T0000707;gene_name=TTTY18;ID=intron:HG00140_ch_T0000707:0;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7455810	7455894	.	+	.	source_transcript=ENST00000843021.1;source_transcript_name=TTTY18-211;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843021.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843021.1,ENST00000843021.1;transcript_id=HG00140_ch_T0000707;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000707;transcript_name=HG00140_ch_T0000707;gene_name=TTTY18;ID=exon:HG00140_ch_T0000707:1;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7455895	7457605	.	+	.	source_transcript=ENST00000843021.1;source_transcript_name=TTTY18-211;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843021.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843021.1,ENST00000843021.1;transcript_id=HG00140_ch_T0000707;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000707;transcript_name=HG00140_ch_T0000707;gene_name=TTTY18;ID=intron:HG00140_ch_T0000707:1;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7457606	7457787	.	+	.	source_transcript=ENST00000843021.1;source_transcript_name=TTTY18-211;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843021.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843021.1,ENST00000843021.1;transcript_id=HG00140_ch_T0000707;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000707;transcript_name=HG00140_ch_T0000707;gene_name=TTTY18;ID=exon:HG00140_ch_T0000707:2;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7453526	7461849	1000	+	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=HG00140_ch_T0000708;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_G0000218;transcript_name=HG00140_ch_T0000708;gene_name=TTTY18;ID=HG00140_ch_T0000708;Name=TTTY18
HG00140_chrY	CAT	exon	7453526	7453700	.	+	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=HG00140_ch_T0000708;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000708;transcript_name=HG00140_ch_T0000708;gene_name=TTTY18;ID=exon:HG00140_ch_T0000708:0;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7453701	7455809	.	+	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=HG00140_ch_T0000708;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000708;transcript_name=HG00140_ch_T0000708;gene_name=TTTY18;ID=intron:HG00140_ch_T0000708:0;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7455810	7455894	.	+	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=HG00140_ch_T0000708;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000708;transcript_name=HG00140_ch_T0000708;gene_name=TTTY18;ID=exon:HG00140_ch_T0000708:1;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7455895	7458234	.	+	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=HG00140_ch_T0000708;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000708;transcript_name=HG00140_ch_T0000708;gene_name=TTTY18;ID=intron:HG00140_ch_T0000708:1;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7458235	7458289	.	+	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=HG00140_ch_T0000708;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000708;transcript_name=HG00140_ch_T0000708;gene_name=TTTY18;ID=exon:HG00140_ch_T0000708:2;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7458290	7459314	.	+	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=HG00140_ch_T0000708;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000708;transcript_name=HG00140_ch_T0000708;gene_name=TTTY18;ID=intron:HG00140_ch_T0000708:2;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7459315	7459450	.	+	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=HG00140_ch_T0000708;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000708;transcript_name=HG00140_ch_T0000708;gene_name=TTTY18;ID=exon:HG00140_ch_T0000708:3;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7459451	7461032	.	+	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=HG00140_ch_T0000708;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000708;transcript_name=HG00140_ch_T0000708;gene_name=TTTY18;ID=intron:HG00140_ch_T0000708:3;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7461033	7461251	.	+	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=HG00140_ch_T0000708;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000708;transcript_name=HG00140_ch_T0000708;gene_name=TTTY18;ID=exon:HG00140_ch_T0000708:4;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7461252	7461539	.	+	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=HG00140_ch_T0000708;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000708;transcript_name=HG00140_ch_T0000708;gene_name=TTTY18;ID=intron:HG00140_ch_T0000708:4;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7461540	7461849	.	+	.	source_transcript=ENST00000843016.1;source_transcript_name=TTTY18-206;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843016.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843016.1,ENST00000843016.1;transcript_id=HG00140_ch_T0000708;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000708;transcript_name=HG00140_ch_T0000708;gene_name=TTTY18;ID=exon:HG00140_ch_T0000708:5;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7453529	7461849	1000	+	.	source_transcript=ENST00000843017.1;source_transcript_name=TTTY18-207;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843017.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843017.1,ENST00000843017.1;transcript_id=HG00140_ch_T0000709;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_G0000218;transcript_name=HG00140_ch_T0000709;gene_name=TTTY18;ID=HG00140_ch_T0000709;Name=TTTY18
HG00140_chrY	CAT	exon	7453529	7453700	.	+	.	source_transcript=ENST00000843017.1;source_transcript_name=TTTY18-207;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843017.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843017.1,ENST00000843017.1;transcript_id=HG00140_ch_T0000709;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000709;transcript_name=HG00140_ch_T0000709;gene_name=TTTY18;ID=exon:HG00140_ch_T0000709:0;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7453701	7455809	.	+	.	source_transcript=ENST00000843017.1;source_transcript_name=TTTY18-207;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843017.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843017.1,ENST00000843017.1;transcript_id=HG00140_ch_T0000709;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000709;transcript_name=HG00140_ch_T0000709;gene_name=TTTY18;ID=intron:HG00140_ch_T0000709:0;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7455810	7455894	.	+	.	source_transcript=ENST00000843017.1;source_transcript_name=TTTY18-207;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843017.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843017.1,ENST00000843017.1;transcript_id=HG00140_ch_T0000709;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000709;transcript_name=HG00140_ch_T0000709;gene_name=TTTY18;ID=exon:HG00140_ch_T0000709:1;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7455895	7458234	.	+	.	source_transcript=ENST00000843017.1;source_transcript_name=TTTY18-207;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843017.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843017.1,ENST00000843017.1;transcript_id=HG00140_ch_T0000709;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000709;transcript_name=HG00140_ch_T0000709;gene_name=TTTY18;ID=intron:HG00140_ch_T0000709:1;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7458235	7458289	.	+	.	source_transcript=ENST00000843017.1;source_transcript_name=TTTY18-207;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843017.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843017.1,ENST00000843017.1;transcript_id=HG00140_ch_T0000709;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000709;transcript_name=HG00140_ch_T0000709;gene_name=TTTY18;ID=exon:HG00140_ch_T0000709:2;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7458290	7461539	.	+	.	source_transcript=ENST00000843017.1;source_transcript_name=TTTY18-207;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843017.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843017.1,ENST00000843017.1;transcript_id=HG00140_ch_T0000709;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000709;transcript_name=HG00140_ch_T0000709;gene_name=TTTY18;ID=intron:HG00140_ch_T0000709:2;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7461540	7461849	.	+	.	source_transcript=ENST00000843017.1;source_transcript_name=TTTY18-207;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843017.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843017.1,ENST00000843017.1;transcript_id=HG00140_ch_T0000709;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000709;transcript_name=HG00140_ch_T0000709;gene_name=TTTY18;ID=exon:HG00140_ch_T0000709:3;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7459251	7461847	1000	+	.	source_transcript=ENST00000843022.1;source_transcript_name=TTTY18-212;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843022.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843022.1,ENST00000843022.1;transcript_id=HG00140_ch_T0000714;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_G0000218;transcript_name=HG00140_ch_T0000714;gene_name=TTTY18;ID=HG00140_ch_T0000714;Name=TTTY18
HG00140_chrY	CAT	exon	7459251	7459450	.	+	.	source_transcript=ENST00000843022.1;source_transcript_name=TTTY18-212;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843022.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843022.1,ENST00000843022.1;transcript_id=HG00140_ch_T0000714;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000714;transcript_name=HG00140_ch_T0000714;gene_name=TTTY18;ID=exon:HG00140_ch_T0000714:0;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7459451	7461032	.	+	.	source_transcript=ENST00000843022.1;source_transcript_name=TTTY18-212;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843022.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843022.1,ENST00000843022.1;transcript_id=HG00140_ch_T0000714;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000714;transcript_name=HG00140_ch_T0000714;gene_name=TTTY18;ID=intron:HG00140_ch_T0000714:0;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7461033	7461251	.	+	.	source_transcript=ENST00000843022.1;source_transcript_name=TTTY18-212;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843022.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843022.1,ENST00000843022.1;transcript_id=HG00140_ch_T0000714;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000714;transcript_name=HG00140_ch_T0000714;gene_name=TTTY18;ID=exon:HG00140_ch_T0000714:1;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7461252	7461539	.	+	.	source_transcript=ENST00000843022.1;source_transcript_name=TTTY18-212;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843022.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843022.1,ENST00000843022.1;transcript_id=HG00140_ch_T0000714;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000714;transcript_name=HG00140_ch_T0000714;gene_name=TTTY18;ID=intron:HG00140_ch_T0000714:1;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7461540	7461847	.	+	.	source_transcript=ENST00000843022.1;source_transcript_name=TTTY18-212;source_gene=ENSG00000233699.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000233699.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843022.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=ENST00000843022.1,ENST00000843022.1;transcript_id=HG00140_ch_T0000714;gene_id=HG00140_ch_G0000218;Parent=HG00140_ch_T0000714;transcript_name=HG00140_ch_T0000714;gene_name=TTTY18;ID=exon:HG00140_ch_T0000714:2;Name=TTTY18;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	7439667	7440478	.	-	.	source_gene_common_name=TTTY19;source_gene=ENSG00000232419.1;gene_id=HG00140_ch_G0000219;gene_biotype=lncRNA;gene_name=TTTY19;gene_sources=liftoff;ID=HG00140_ch_G0000219;Name=TTTY19
HG00140_chrY	CAT	transcript	7439667	7440478	1000	-	.	source_transcript=ENST00000453955.1;source_transcript_name=TTTY19-201;source_gene=ENSG00000232419.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000232419.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000453955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453955.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;transcript_id=HG00140_ch_T0000700;gene_id=HG00140_ch_G0000219;Parent=HG00140_ch_G0000219;transcript_name=HG00140_ch_T0000700;gene_name=TTTY19;ID=HG00140_ch_T0000700;Name=TTTY19
HG00140_chrY	CAT	exon	7439667	7439847	.	-	.	source_transcript=ENST00000453955.1;source_transcript_name=TTTY19-201;source_gene=ENSG00000232419.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000232419.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000453955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453955.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;transcript_id=HG00140_ch_T0000700;gene_id=HG00140_ch_G0000219;Parent=HG00140_ch_T0000700;transcript_name=HG00140_ch_T0000700;gene_name=TTTY19;ID=exon:HG00140_ch_T0000700:0;Name=TTTY19;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7439848	7440390	.	-	.	source_transcript=ENST00000453955.1;source_transcript_name=TTTY19-201;source_gene=ENSG00000232419.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000232419.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000453955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453955.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;transcript_id=HG00140_ch_T0000700;gene_id=HG00140_ch_G0000219;Parent=HG00140_ch_T0000700;transcript_name=HG00140_ch_T0000700;gene_name=TTTY19;ID=intron:HG00140_ch_T0000700:0;Name=TTTY19;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7440391	7440478	.	-	.	source_transcript=ENST00000453955.1;source_transcript_name=TTTY19-201;source_gene=ENSG00000232419.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000232419.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000453955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453955.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;transcript_id=HG00140_ch_T0000700;gene_id=HG00140_ch_G0000219;Parent=HG00140_ch_T0000700;transcript_name=HG00140_ch_T0000700;gene_name=TTTY19;ID=exon:HG00140_ch_T0000700:1;Name=TTTY19;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	7465774	7477559	.	+	.	source_gene_common_name=ENSG00000309700;source_gene=ENSG00000309700.1;alternative_source_transcripts=ENST00000843139.1,ENST00000843139.1;gene_id=HG00140_ch_G0000220;gene_biotype=lncRNA;gene_name=ENSG00000309700;gene_sources=liftoff,transMap_pairwise;ID=HG00140_ch_G0000220;Name=ENSG00000309700
HG00140_chrY	CAT	transcript	7465774	7472827	1000	+	.	source_transcript=ENST00000843139.1;source_transcript_name=ENST00000843139;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843139.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843139.1,ENST00000843139.1;transcript_id=HG00140_ch_T0000716;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_G0000220;transcript_name=HG00140_ch_T0000716;gene_name=ENSG00000309700;ID=HG00140_ch_T0000716;Name=ENSG00000309700
HG00140_chrY	CAT	exon	7465774	7465985	.	+	.	source_transcript=ENST00000843139.1;source_transcript_name=ENST00000843139;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843139.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843139.1,ENST00000843139.1;transcript_id=HG00140_ch_T0000716;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000716;transcript_name=HG00140_ch_T0000716;gene_name=ENSG00000309700;ID=exon:HG00140_ch_T0000716:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7465986	7467624	.	+	.	source_transcript=ENST00000843139.1;source_transcript_name=ENST00000843139;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843139.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843139.1,ENST00000843139.1;transcript_id=HG00140_ch_T0000716;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000716;transcript_name=HG00140_ch_T0000716;gene_name=ENSG00000309700;ID=intron:HG00140_ch_T0000716:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7467625	7467708	.	+	.	source_transcript=ENST00000843139.1;source_transcript_name=ENST00000843139;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843139.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843139.1,ENST00000843139.1;transcript_id=HG00140_ch_T0000716;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000716;transcript_name=HG00140_ch_T0000716;gene_name=ENSG00000309700;ID=exon:HG00140_ch_T0000716:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7467709	7470006	.	+	.	source_transcript=ENST00000843139.1;source_transcript_name=ENST00000843139;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843139.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843139.1,ENST00000843139.1;transcript_id=HG00140_ch_T0000716;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000716;transcript_name=HG00140_ch_T0000716;gene_name=ENSG00000309700;ID=intron:HG00140_ch_T0000716:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7470007	7470081	.	+	.	source_transcript=ENST00000843139.1;source_transcript_name=ENST00000843139;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843139.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843139.1,ENST00000843139.1;transcript_id=HG00140_ch_T0000716;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000716;transcript_name=HG00140_ch_T0000716;gene_name=ENSG00000309700;ID=exon:HG00140_ch_T0000716:2;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7470082	7471059	.	+	.	source_transcript=ENST00000843139.1;source_transcript_name=ENST00000843139;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843139.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843139.1,ENST00000843139.1;transcript_id=HG00140_ch_T0000716;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000716;transcript_name=HG00140_ch_T0000716;gene_name=ENSG00000309700;ID=intron:HG00140_ch_T0000716:2;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7471060	7471208	.	+	.	source_transcript=ENST00000843139.1;source_transcript_name=ENST00000843139;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843139.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843139.1,ENST00000843139.1;transcript_id=HG00140_ch_T0000716;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000716;transcript_name=HG00140_ch_T0000716;gene_name=ENSG00000309700;ID=exon:HG00140_ch_T0000716:3;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7471209	7472362	.	+	.	source_transcript=ENST00000843139.1;source_transcript_name=ENST00000843139;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843139.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843139.1,ENST00000843139.1;transcript_id=HG00140_ch_T0000716;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000716;transcript_name=HG00140_ch_T0000716;gene_name=ENSG00000309700;ID=intron:HG00140_ch_T0000716:3;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7472363	7472827	.	+	.	source_transcript=ENST00000843139.1;source_transcript_name=ENST00000843139;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843139.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843139.1,ENST00000843139.1;transcript_id=HG00140_ch_T0000716;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000716;transcript_name=HG00140_ch_T0000716;gene_name=ENSG00000309700;ID=exon:HG00140_ch_T0000716:4;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7465795	7477558	1000	+	.	source_transcript=ENST00000843132.1;source_transcript_name=ENST00000843132;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843132.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843132.1,ENST00000843132.1;transcript_id=HG00140_ch_T0000717;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_G0000220;transcript_name=HG00140_ch_T0000717;gene_name=ENSG00000309700;ID=HG00140_ch_T0000717;Name=ENSG00000309700
HG00140_chrY	CAT	exon	7465795	7465985	.	+	.	source_transcript=ENST00000843132.1;source_transcript_name=ENST00000843132;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843132.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843132.1,ENST00000843132.1;transcript_id=HG00140_ch_T0000717;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000717;transcript_name=HG00140_ch_T0000717;gene_name=ENSG00000309700;ID=exon:HG00140_ch_T0000717:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7465986	7467477	.	+	.	source_transcript=ENST00000843132.1;source_transcript_name=ENST00000843132;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843132.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843132.1,ENST00000843132.1;transcript_id=HG00140_ch_T0000717;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000717;transcript_name=HG00140_ch_T0000717;gene_name=ENSG00000309700;ID=intron:HG00140_ch_T0000717:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7467478	7467708	.	+	.	source_transcript=ENST00000843132.1;source_transcript_name=ENST00000843132;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843132.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843132.1,ENST00000843132.1;transcript_id=HG00140_ch_T0000717;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000717;transcript_name=HG00140_ch_T0000717;gene_name=ENSG00000309700;ID=exon:HG00140_ch_T0000717:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7467709	7470006	.	+	.	source_transcript=ENST00000843132.1;source_transcript_name=ENST00000843132;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843132.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843132.1,ENST00000843132.1;transcript_id=HG00140_ch_T0000717;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000717;transcript_name=HG00140_ch_T0000717;gene_name=ENSG00000309700;ID=intron:HG00140_ch_T0000717:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7470007	7470081	.	+	.	source_transcript=ENST00000843132.1;source_transcript_name=ENST00000843132;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843132.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843132.1,ENST00000843132.1;transcript_id=HG00140_ch_T0000717;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000717;transcript_name=HG00140_ch_T0000717;gene_name=ENSG00000309700;ID=exon:HG00140_ch_T0000717:2;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7470082	7471059	.	+	.	source_transcript=ENST00000843132.1;source_transcript_name=ENST00000843132;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843132.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843132.1,ENST00000843132.1;transcript_id=HG00140_ch_T0000717;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000717;transcript_name=HG00140_ch_T0000717;gene_name=ENSG00000309700;ID=intron:HG00140_ch_T0000717:2;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7471060	7471208	.	+	.	source_transcript=ENST00000843132.1;source_transcript_name=ENST00000843132;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843132.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843132.1,ENST00000843132.1;transcript_id=HG00140_ch_T0000717;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000717;transcript_name=HG00140_ch_T0000717;gene_name=ENSG00000309700;ID=exon:HG00140_ch_T0000717:3;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7471209	7477316	.	+	.	source_transcript=ENST00000843132.1;source_transcript_name=ENST00000843132;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843132.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843132.1,ENST00000843132.1;transcript_id=HG00140_ch_T0000717;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000717;transcript_name=HG00140_ch_T0000717;gene_name=ENSG00000309700;ID=intron:HG00140_ch_T0000717:3;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7477317	7477558	.	+	.	source_transcript=ENST00000843132.1;source_transcript_name=ENST00000843132;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843132.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843132.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843132.1,ENST00000843132.1;transcript_id=HG00140_ch_T0000717;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000717;transcript_name=HG00140_ch_T0000717;gene_name=ENSG00000309700;ID=exon:HG00140_ch_T0000717:4;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7465803	7477558	1000	+	.	source_transcript=ENST00000843133.1;source_transcript_name=ENST00000843133;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843133.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843133.1,ENST00000843133.1;transcript_id=HG00140_ch_T0000718;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_G0000220;transcript_name=HG00140_ch_T0000718;gene_name=ENSG00000309700;ID=HG00140_ch_T0000718;Name=ENSG00000309700
HG00140_chrY	CAT	exon	7465803	7465985	.	+	.	source_transcript=ENST00000843133.1;source_transcript_name=ENST00000843133;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843133.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843133.1,ENST00000843133.1;transcript_id=HG00140_ch_T0000718;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000718;transcript_name=HG00140_ch_T0000718;gene_name=ENSG00000309700;ID=exon:HG00140_ch_T0000718:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7465986	7467624	.	+	.	source_transcript=ENST00000843133.1;source_transcript_name=ENST00000843133;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843133.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843133.1,ENST00000843133.1;transcript_id=HG00140_ch_T0000718;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000718;transcript_name=HG00140_ch_T0000718;gene_name=ENSG00000309700;ID=intron:HG00140_ch_T0000718:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7467625	7467708	.	+	.	source_transcript=ENST00000843133.1;source_transcript_name=ENST00000843133;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843133.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843133.1,ENST00000843133.1;transcript_id=HG00140_ch_T0000718;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000718;transcript_name=HG00140_ch_T0000718;gene_name=ENSG00000309700;ID=exon:HG00140_ch_T0000718:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7467709	7470006	.	+	.	source_transcript=ENST00000843133.1;source_transcript_name=ENST00000843133;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843133.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843133.1,ENST00000843133.1;transcript_id=HG00140_ch_T0000718;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000718;transcript_name=HG00140_ch_T0000718;gene_name=ENSG00000309700;ID=intron:HG00140_ch_T0000718:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7470007	7470081	.	+	.	source_transcript=ENST00000843133.1;source_transcript_name=ENST00000843133;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843133.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843133.1,ENST00000843133.1;transcript_id=HG00140_ch_T0000718;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000718;transcript_name=HG00140_ch_T0000718;gene_name=ENSG00000309700;ID=exon:HG00140_ch_T0000718:2;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7470082	7471059	.	+	.	source_transcript=ENST00000843133.1;source_transcript_name=ENST00000843133;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843133.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843133.1,ENST00000843133.1;transcript_id=HG00140_ch_T0000718;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000718;transcript_name=HG00140_ch_T0000718;gene_name=ENSG00000309700;ID=intron:HG00140_ch_T0000718:2;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7471060	7471208	.	+	.	source_transcript=ENST00000843133.1;source_transcript_name=ENST00000843133;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843133.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843133.1,ENST00000843133.1;transcript_id=HG00140_ch_T0000718;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000718;transcript_name=HG00140_ch_T0000718;gene_name=ENSG00000309700;ID=exon:HG00140_ch_T0000718:3;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7471209	7477316	.	+	.	source_transcript=ENST00000843133.1;source_transcript_name=ENST00000843133;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843133.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843133.1,ENST00000843133.1;transcript_id=HG00140_ch_T0000718;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000718;transcript_name=HG00140_ch_T0000718;gene_name=ENSG00000309700;ID=intron:HG00140_ch_T0000718:3;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7477317	7477558	.	+	.	source_transcript=ENST00000843133.1;source_transcript_name=ENST00000843133;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843133.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843133.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843133.1,ENST00000843133.1;transcript_id=HG00140_ch_T0000718;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000718;transcript_name=HG00140_ch_T0000718;gene_name=ENSG00000309700;ID=exon:HG00140_ch_T0000718:4;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7465889	7477558	1000	+	.	source_transcript=ENST00000843134.1;source_transcript_name=ENST00000843134;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843134.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843134.1,ENST00000843134.1;transcript_id=HG00140_ch_T0000719;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_G0000220;transcript_name=HG00140_ch_T0000719;gene_name=ENSG00000309700;ID=HG00140_ch_T0000719;Name=ENSG00000309700
HG00140_chrY	CAT	exon	7465889	7465985	.	+	.	source_transcript=ENST00000843134.1;source_transcript_name=ENST00000843134;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843134.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843134.1,ENST00000843134.1;transcript_id=HG00140_ch_T0000719;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000719;transcript_name=HG00140_ch_T0000719;gene_name=ENSG00000309700;ID=exon:HG00140_ch_T0000719:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7465986	7467624	.	+	.	source_transcript=ENST00000843134.1;source_transcript_name=ENST00000843134;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843134.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843134.1,ENST00000843134.1;transcript_id=HG00140_ch_T0000719;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000719;transcript_name=HG00140_ch_T0000719;gene_name=ENSG00000309700;ID=intron:HG00140_ch_T0000719:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7467625	7467708	.	+	.	source_transcript=ENST00000843134.1;source_transcript_name=ENST00000843134;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843134.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843134.1,ENST00000843134.1;transcript_id=HG00140_ch_T0000719;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000719;transcript_name=HG00140_ch_T0000719;gene_name=ENSG00000309700;ID=exon:HG00140_ch_T0000719:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7467709	7470006	.	+	.	source_transcript=ENST00000843134.1;source_transcript_name=ENST00000843134;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843134.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843134.1,ENST00000843134.1;transcript_id=HG00140_ch_T0000719;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000719;transcript_name=HG00140_ch_T0000719;gene_name=ENSG00000309700;ID=intron:HG00140_ch_T0000719:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7470007	7470081	.	+	.	source_transcript=ENST00000843134.1;source_transcript_name=ENST00000843134;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843134.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843134.1,ENST00000843134.1;transcript_id=HG00140_ch_T0000719;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000719;transcript_name=HG00140_ch_T0000719;gene_name=ENSG00000309700;ID=exon:HG00140_ch_T0000719:2;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7470082	7477316	.	+	.	source_transcript=ENST00000843134.1;source_transcript_name=ENST00000843134;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843134.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843134.1,ENST00000843134.1;transcript_id=HG00140_ch_T0000719;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000719;transcript_name=HG00140_ch_T0000719;gene_name=ENSG00000309700;ID=intron:HG00140_ch_T0000719:2;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7477317	7477558	.	+	.	source_transcript=ENST00000843134.1;source_transcript_name=ENST00000843134;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843134.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843134.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843134.1,ENST00000843134.1;transcript_id=HG00140_ch_T0000719;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000719;transcript_name=HG00140_ch_T0000719;gene_name=ENSG00000309700;ID=exon:HG00140_ch_T0000719:3;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7467238	7477559	1000	+	.	source_transcript=ENST00000843135.1;source_transcript_name=ENST00000843135;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843135.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843135.1;transcript_id=HG00140_ch_T0000721;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_G0000220;transcript_name=HG00140_ch_T0000721;gene_name=ENSG00000309700;ID=HG00140_ch_T0000721;Name=ENSG00000309700
HG00140_chrY	CAT	exon	7467238	7467708	.	+	.	source_transcript=ENST00000843135.1;source_transcript_name=ENST00000843135;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843135.1;transcript_id=HG00140_ch_T0000721;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000721;transcript_name=HG00140_ch_T0000721;gene_name=ENSG00000309700;ID=exon:HG00140_ch_T0000721:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7467709	7470006	.	+	.	source_transcript=ENST00000843135.1;source_transcript_name=ENST00000843135;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843135.1;transcript_id=HG00140_ch_T0000721;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000721;transcript_name=HG00140_ch_T0000721;gene_name=ENSG00000309700;ID=intron:HG00140_ch_T0000721:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7470007	7470081	.	+	.	source_transcript=ENST00000843135.1;source_transcript_name=ENST00000843135;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843135.1;transcript_id=HG00140_ch_T0000721;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000721;transcript_name=HG00140_ch_T0000721;gene_name=ENSG00000309700;ID=exon:HG00140_ch_T0000721:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7470082	7471059	.	+	.	source_transcript=ENST00000843135.1;source_transcript_name=ENST00000843135;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843135.1;transcript_id=HG00140_ch_T0000721;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000721;transcript_name=HG00140_ch_T0000721;gene_name=ENSG00000309700;ID=intron:HG00140_ch_T0000721:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7471060	7471208	.	+	.	source_transcript=ENST00000843135.1;source_transcript_name=ENST00000843135;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843135.1;transcript_id=HG00140_ch_T0000721;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000721;transcript_name=HG00140_ch_T0000721;gene_name=ENSG00000309700;ID=exon:HG00140_ch_T0000721:2;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7471209	7477316	.	+	.	source_transcript=ENST00000843135.1;source_transcript_name=ENST00000843135;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843135.1;transcript_id=HG00140_ch_T0000721;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000721;transcript_name=HG00140_ch_T0000721;gene_name=ENSG00000309700;ID=intron:HG00140_ch_T0000721:2;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7477317	7477559	.	+	.	source_transcript=ENST00000843135.1;source_transcript_name=ENST00000843135;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843135.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843135.1;transcript_id=HG00140_ch_T0000721;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000721;transcript_name=HG00140_ch_T0000721;gene_name=ENSG00000309700;ID=exon:HG00140_ch_T0000721:3;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7467238	7477558	1000	+	.	source_transcript=ENST00000843135.1;source_transcript_name=ENST00000843135;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843135.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000843135.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;transcript_id=HG00140_ch_T0000722;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_G0000220;transcript_name=HG00140_ch_T0000722;gene_name=ENSG00000309700;ID=HG00140_ch_T0000722;Name=ENSG00000309700
HG00140_chrY	CAT	exon	7467238	7467708	.	+	.	source_transcript=ENST00000843135.1;source_transcript_name=ENST00000843135;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843135.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000843135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;transcript_id=HG00140_ch_T0000722;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000722;transcript_name=HG00140_ch_T0000722;gene_name=ENSG00000309700;ID=exon:HG00140_ch_T0000722:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7467709	7470006	.	+	.	source_transcript=ENST00000843135.1;source_transcript_name=ENST00000843135;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843135.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000843135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;transcript_id=HG00140_ch_T0000722;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000722;transcript_name=HG00140_ch_T0000722;gene_name=ENSG00000309700;ID=intron:HG00140_ch_T0000722:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7470007	7470081	.	+	.	source_transcript=ENST00000843135.1;source_transcript_name=ENST00000843135;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843135.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000843135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;transcript_id=HG00140_ch_T0000722;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000722;transcript_name=HG00140_ch_T0000722;gene_name=ENSG00000309700;ID=exon:HG00140_ch_T0000722:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7470082	7471059	.	+	.	source_transcript=ENST00000843135.1;source_transcript_name=ENST00000843135;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843135.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000843135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;transcript_id=HG00140_ch_T0000722;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000722;transcript_name=HG00140_ch_T0000722;gene_name=ENSG00000309700;ID=intron:HG00140_ch_T0000722:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7471060	7471208	.	+	.	source_transcript=ENST00000843135.1;source_transcript_name=ENST00000843135;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843135.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000843135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;transcript_id=HG00140_ch_T0000722;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000722;transcript_name=HG00140_ch_T0000722;gene_name=ENSG00000309700;ID=exon:HG00140_ch_T0000722:2;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7471209	7477316	.	+	.	source_transcript=ENST00000843135.1;source_transcript_name=ENST00000843135;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843135.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000843135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;transcript_id=HG00140_ch_T0000722;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000722;transcript_name=HG00140_ch_T0000722;gene_name=ENSG00000309700;ID=intron:HG00140_ch_T0000722:2;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7477317	7477558	.	+	.	source_transcript=ENST00000843135.1;source_transcript_name=ENST00000843135;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843135.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000843135.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;transcript_id=HG00140_ch_T0000722;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000722;transcript_name=HG00140_ch_T0000722;gene_name=ENSG00000309700;ID=exon:HG00140_ch_T0000722:3;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7467326	7477558	1000	+	.	source_transcript=ENST00000843136.1;source_transcript_name=ENST00000843136;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843136.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843136.1,ENST00000843136.1;transcript_id=HG00140_ch_T0000723;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_G0000220;transcript_name=HG00140_ch_T0000723;gene_name=ENSG00000309700;ID=HG00140_ch_T0000723;Name=ENSG00000309700
HG00140_chrY	CAT	exon	7467326	7467708	.	+	.	source_transcript=ENST00000843136.1;source_transcript_name=ENST00000843136;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843136.1,ENST00000843136.1;transcript_id=HG00140_ch_T0000723;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000723;transcript_name=HG00140_ch_T0000723;gene_name=ENSG00000309700;ID=exon:HG00140_ch_T0000723:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7467709	7471059	.	+	.	source_transcript=ENST00000843136.1;source_transcript_name=ENST00000843136;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843136.1,ENST00000843136.1;transcript_id=HG00140_ch_T0000723;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000723;transcript_name=HG00140_ch_T0000723;gene_name=ENSG00000309700;ID=intron:HG00140_ch_T0000723:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7471060	7471208	.	+	.	source_transcript=ENST00000843136.1;source_transcript_name=ENST00000843136;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843136.1,ENST00000843136.1;transcript_id=HG00140_ch_T0000723;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000723;transcript_name=HG00140_ch_T0000723;gene_name=ENSG00000309700;ID=exon:HG00140_ch_T0000723:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7471209	7477316	.	+	.	source_transcript=ENST00000843136.1;source_transcript_name=ENST00000843136;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843136.1,ENST00000843136.1;transcript_id=HG00140_ch_T0000723;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000723;transcript_name=HG00140_ch_T0000723;gene_name=ENSG00000309700;ID=intron:HG00140_ch_T0000723:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7477317	7477558	.	+	.	source_transcript=ENST00000843136.1;source_transcript_name=ENST00000843136;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843136.1,ENST00000843136.1;transcript_id=HG00140_ch_T0000723;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000723;transcript_name=HG00140_ch_T0000723;gene_name=ENSG00000309700;ID=exon:HG00140_ch_T0000723:2;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7467372	7477558	1000	+	.	source_transcript=ENST00000843137.1;source_transcript_name=ENST00000843137;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843137.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843137.1,ENST00000843137.1;transcript_id=HG00140_ch_T0000724;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_G0000220;transcript_name=HG00140_ch_T0000724;gene_name=ENSG00000309700;ID=HG00140_ch_T0000724;Name=ENSG00000309700
HG00140_chrY	CAT	exon	7467372	7467708	.	+	.	source_transcript=ENST00000843137.1;source_transcript_name=ENST00000843137;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843137.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843137.1,ENST00000843137.1;transcript_id=HG00140_ch_T0000724;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000724;transcript_name=HG00140_ch_T0000724;gene_name=ENSG00000309700;ID=exon:HG00140_ch_T0000724:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7467709	7470006	.	+	.	source_transcript=ENST00000843137.1;source_transcript_name=ENST00000843137;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843137.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843137.1,ENST00000843137.1;transcript_id=HG00140_ch_T0000724;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000724;transcript_name=HG00140_ch_T0000724;gene_name=ENSG00000309700;ID=intron:HG00140_ch_T0000724:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7470007	7470081	.	+	.	source_transcript=ENST00000843137.1;source_transcript_name=ENST00000843137;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843137.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843137.1,ENST00000843137.1;transcript_id=HG00140_ch_T0000724;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000724;transcript_name=HG00140_ch_T0000724;gene_name=ENSG00000309700;ID=exon:HG00140_ch_T0000724:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7470082	7477316	.	+	.	source_transcript=ENST00000843137.1;source_transcript_name=ENST00000843137;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843137.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843137.1,ENST00000843137.1;transcript_id=HG00140_ch_T0000724;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000724;transcript_name=HG00140_ch_T0000724;gene_name=ENSG00000309700;ID=intron:HG00140_ch_T0000724:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7477317	7477558	.	+	.	source_transcript=ENST00000843137.1;source_transcript_name=ENST00000843137;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843137.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843137.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843137.1,ENST00000843137.1;transcript_id=HG00140_ch_T0000724;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000724;transcript_name=HG00140_ch_T0000724;gene_name=ENSG00000309700;ID=exon:HG00140_ch_T0000724:2;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7467507	7477558	1000	+	.	source_transcript=ENST00000843138.1;source_transcript_name=ENST00000843138;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843138.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843138.1,ENST00000843138.1;transcript_id=HG00140_ch_T0000725;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_G0000220;transcript_name=HG00140_ch_T0000725;gene_name=ENSG00000309700;ID=HG00140_ch_T0000725;Name=ENSG00000309700
HG00140_chrY	CAT	exon	7467507	7467708	.	+	.	source_transcript=ENST00000843138.1;source_transcript_name=ENST00000843138;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843138.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843138.1,ENST00000843138.1;transcript_id=HG00140_ch_T0000725;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000725;transcript_name=HG00140_ch_T0000725;gene_name=ENSG00000309700;ID=exon:HG00140_ch_T0000725:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7467709	7477316	.	+	.	source_transcript=ENST00000843138.1;source_transcript_name=ENST00000843138;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843138.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843138.1,ENST00000843138.1;transcript_id=HG00140_ch_T0000725;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000725;transcript_name=HG00140_ch_T0000725;gene_name=ENSG00000309700;ID=intron:HG00140_ch_T0000725:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7477317	7477558	.	+	.	source_transcript=ENST00000843138.1;source_transcript_name=ENST00000843138;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843138.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843138.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843138.1,ENST00000843138.1;transcript_id=HG00140_ch_T0000725;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000725;transcript_name=HG00140_ch_T0000725;gene_name=ENSG00000309700;ID=exon:HG00140_ch_T0000725:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7467539	7472824	1000	+	.	source_transcript=ENST00000843142.1;source_transcript_name=ENST00000843142;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843142.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843142.1,ENST00000843142.1;transcript_id=HG00140_ch_T0000726;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_G0000220;transcript_name=HG00140_ch_T0000726;gene_name=ENSG00000309700;ID=HG00140_ch_T0000726;Name=ENSG00000309700
HG00140_chrY	CAT	exon	7467539	7467708	.	+	.	source_transcript=ENST00000843142.1;source_transcript_name=ENST00000843142;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843142.1,ENST00000843142.1;transcript_id=HG00140_ch_T0000726;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000726;transcript_name=HG00140_ch_T0000726;gene_name=ENSG00000309700;ID=exon:HG00140_ch_T0000726:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7467709	7470006	.	+	.	source_transcript=ENST00000843142.1;source_transcript_name=ENST00000843142;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843142.1,ENST00000843142.1;transcript_id=HG00140_ch_T0000726;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000726;transcript_name=HG00140_ch_T0000726;gene_name=ENSG00000309700;ID=intron:HG00140_ch_T0000726:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7470007	7470081	.	+	.	source_transcript=ENST00000843142.1;source_transcript_name=ENST00000843142;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843142.1,ENST00000843142.1;transcript_id=HG00140_ch_T0000726;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000726;transcript_name=HG00140_ch_T0000726;gene_name=ENSG00000309700;ID=exon:HG00140_ch_T0000726:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7470082	7471059	.	+	.	source_transcript=ENST00000843142.1;source_transcript_name=ENST00000843142;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843142.1,ENST00000843142.1;transcript_id=HG00140_ch_T0000726;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000726;transcript_name=HG00140_ch_T0000726;gene_name=ENSG00000309700;ID=intron:HG00140_ch_T0000726:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7471060	7471208	.	+	.	source_transcript=ENST00000843142.1;source_transcript_name=ENST00000843142;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843142.1,ENST00000843142.1;transcript_id=HG00140_ch_T0000726;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000726;transcript_name=HG00140_ch_T0000726;gene_name=ENSG00000309700;ID=exon:HG00140_ch_T0000726:2;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7471209	7472362	.	+	.	source_transcript=ENST00000843142.1;source_transcript_name=ENST00000843142;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843142.1,ENST00000843142.1;transcript_id=HG00140_ch_T0000726;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000726;transcript_name=HG00140_ch_T0000726;gene_name=ENSG00000309700;ID=intron:HG00140_ch_T0000726:2;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7472363	7472824	.	+	.	source_transcript=ENST00000843142.1;source_transcript_name=ENST00000843142;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843142.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843142.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843142.1,ENST00000843142.1;transcript_id=HG00140_ch_T0000726;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000726;transcript_name=HG00140_ch_T0000726;gene_name=ENSG00000309700;ID=exon:HG00140_ch_T0000726:3;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7470906	7477559	1000	+	.	source_transcript=ENST00000843140.1;source_transcript_name=ENST00000843140;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843140.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843140.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843140.1;transcript_id=HG00140_ch_T0000727;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_G0000220;transcript_name=HG00140_ch_T0000727;gene_name=ENSG00000309700;ID=HG00140_ch_T0000727;Name=ENSG00000309700
HG00140_chrY	CAT	exon	7470906	7471208	.	+	.	source_transcript=ENST00000843140.1;source_transcript_name=ENST00000843140;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843140.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843140.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843140.1;transcript_id=HG00140_ch_T0000727;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000727;transcript_name=HG00140_ch_T0000727;gene_name=ENSG00000309700;ID=exon:HG00140_ch_T0000727:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7471209	7477316	.	+	.	source_transcript=ENST00000843140.1;source_transcript_name=ENST00000843140;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843140.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843140.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843140.1;transcript_id=HG00140_ch_T0000727;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000727;transcript_name=HG00140_ch_T0000727;gene_name=ENSG00000309700;ID=intron:HG00140_ch_T0000727:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7477317	7477559	.	+	.	source_transcript=ENST00000843140.1;source_transcript_name=ENST00000843140;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843140.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843140.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843140.1;transcript_id=HG00140_ch_T0000727;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000727;transcript_name=HG00140_ch_T0000727;gene_name=ENSG00000309700;ID=exon:HG00140_ch_T0000727:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7470906	7477558	1000	+	.	source_transcript=ENST00000843140.1;source_transcript_name=ENST00000843140;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843140.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000843140.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;transcript_id=HG00140_ch_T0000728;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_G0000220;transcript_name=HG00140_ch_T0000728;gene_name=ENSG00000309700;ID=HG00140_ch_T0000728;Name=ENSG00000309700
HG00140_chrY	CAT	exon	7470906	7471208	.	+	.	source_transcript=ENST00000843140.1;source_transcript_name=ENST00000843140;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843140.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000843140.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;transcript_id=HG00140_ch_T0000728;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000728;transcript_name=HG00140_ch_T0000728;gene_name=ENSG00000309700;ID=exon:HG00140_ch_T0000728:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7471209	7477316	.	+	.	source_transcript=ENST00000843140.1;source_transcript_name=ENST00000843140;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843140.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000843140.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;transcript_id=HG00140_ch_T0000728;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000728;transcript_name=HG00140_ch_T0000728;gene_name=ENSG00000309700;ID=intron:HG00140_ch_T0000728:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7477317	7477558	.	+	.	source_transcript=ENST00000843140.1;source_transcript_name=ENST00000843140;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843140.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000843140.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;transcript_id=HG00140_ch_T0000728;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000728;transcript_name=HG00140_ch_T0000728;gene_name=ENSG00000309700;ID=exon:HG00140_ch_T0000728:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7470910	7472827	1000	+	.	source_transcript=ENST00000843143.1;source_transcript_name=ENST00000843143;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843143.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843143.1,ENST00000843143.1;transcript_id=HG00140_ch_T0000729;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_G0000220;transcript_name=HG00140_ch_T0000729;gene_name=ENSG00000309700;ID=HG00140_ch_T0000729;Name=ENSG00000309700
HG00140_chrY	CAT	exon	7470910	7471208	.	+	.	source_transcript=ENST00000843143.1;source_transcript_name=ENST00000843143;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843143.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843143.1,ENST00000843143.1;transcript_id=HG00140_ch_T0000729;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000729;transcript_name=HG00140_ch_T0000729;gene_name=ENSG00000309700;ID=exon:HG00140_ch_T0000729:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7471209	7472362	.	+	.	source_transcript=ENST00000843143.1;source_transcript_name=ENST00000843143;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843143.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843143.1,ENST00000843143.1;transcript_id=HG00140_ch_T0000729;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000729;transcript_name=HG00140_ch_T0000729;gene_name=ENSG00000309700;ID=intron:HG00140_ch_T0000729:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7472363	7472827	.	+	.	source_transcript=ENST00000843143.1;source_transcript_name=ENST00000843143;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843143.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843143.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843143.1,ENST00000843143.1;transcript_id=HG00140_ch_T0000729;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000729;transcript_name=HG00140_ch_T0000729;gene_name=ENSG00000309700;ID=exon:HG00140_ch_T0000729:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7470916	7477557	1000	+	.	source_transcript=ENST00000843141.1;source_transcript_name=ENST00000843141;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843141.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843141.1,ENST00000843141.1;transcript_id=HG00140_ch_T0000730;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_G0000220;transcript_name=HG00140_ch_T0000730;gene_name=ENSG00000309700;ID=HG00140_ch_T0000730;Name=ENSG00000309700
HG00140_chrY	CAT	exon	7470916	7471208	.	+	.	source_transcript=ENST00000843141.1;source_transcript_name=ENST00000843141;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843141.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843141.1,ENST00000843141.1;transcript_id=HG00140_ch_T0000730;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000730;transcript_name=HG00140_ch_T0000730;gene_name=ENSG00000309700;ID=exon:HG00140_ch_T0000730:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7471209	7475682	.	+	.	source_transcript=ENST00000843141.1;source_transcript_name=ENST00000843141;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843141.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843141.1,ENST00000843141.1;transcript_id=HG00140_ch_T0000730;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000730;transcript_name=HG00140_ch_T0000730;gene_name=ENSG00000309700;ID=intron:HG00140_ch_T0000730:0;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7475683	7475721	.	+	.	source_transcript=ENST00000843141.1;source_transcript_name=ENST00000843141;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843141.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843141.1,ENST00000843141.1;transcript_id=HG00140_ch_T0000730;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000730;transcript_name=HG00140_ch_T0000730;gene_name=ENSG00000309700;ID=exon:HG00140_ch_T0000730:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7475722	7477316	.	+	.	source_transcript=ENST00000843141.1;source_transcript_name=ENST00000843141;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843141.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843141.1,ENST00000843141.1;transcript_id=HG00140_ch_T0000730;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000730;transcript_name=HG00140_ch_T0000730;gene_name=ENSG00000309700;ID=intron:HG00140_ch_T0000730:1;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7477317	7477557	.	+	.	source_transcript=ENST00000843141.1;source_transcript_name=ENST00000843141;source_gene=ENSG00000309700.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309700.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000843141.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000843141.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309700;alternative_source_transcripts=ENST00000843141.1,ENST00000843141.1;transcript_id=HG00140_ch_T0000730;gene_id=HG00140_ch_G0000220;Parent=HG00140_ch_T0000730;transcript_name=HG00140_ch_T0000730;gene_name=ENSG00000309700;ID=exon:HG00140_ch_T0000730:2;Name=ENSG00000309700;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	7627348	7627732	.	+	.	source_gene_common_name=ENSG00000275866;source_gene=ENSG00000275866.1;alternative_source_transcripts=ENST00000621514.1,ENST00000621514.1;gene_id=HG00140_ch_G0000221;gene_biotype=processed_pseudogene;gene_name=ENSG00000275866;gene_sources=liftoff;ID=HG00140_ch_G0000221;Name=ENSG00000275866
HG00140_chrY	CAT	transcript	7627348	7627732	1000	+	.	source_transcript=ENST00000621514.1;source_transcript_name=ENST00000621514;source_gene=ENSG00000275866.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000275866.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000621514.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621514.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275866;alternative_source_transcripts=ENST00000621514.1,ENST00000621514.1;transcript_id=HG00140_ch_T0000744;gene_id=HG00140_ch_G0000221;Parent=HG00140_ch_G0000221;transcript_name=HG00140_ch_T0000744;gene_name=ENSG00000275866;ID=HG00140_ch_T0000744;Name=ENSG00000275866
HG00140_chrY	CAT	exon	7627348	7627732	.	+	.	source_transcript=ENST00000621514.1;source_transcript_name=ENST00000621514;source_gene=ENSG00000275866.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000275866.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000621514.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621514.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275866;alternative_source_transcripts=ENST00000621514.1,ENST00000621514.1;transcript_id=HG00140_ch_T0000744;gene_id=HG00140_ch_G0000221;Parent=HG00140_ch_T0000744;transcript_name=HG00140_ch_T0000744;gene_name=ENSG00000275866;ID=exon:HG00140_ch_T0000744:0;Name=ENSG00000275866;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	7725204	7726313	.	+	.	source_gene_common_name=ZNF736P10Y;source_gene=ENSG00000216824.2;alternative_source_transcripts=ENST00000403990.2,ENST00000403990.2;gene_id=HG00140_ch_G0000222;gene_biotype=processed_pseudogene;gene_name=ZNF736P10Y;gene_sources=liftoff;ID=HG00140_ch_G0000222;Name=ZNF736P10Y
HG00140_chrY	CAT	transcript	7725204	7726313	1000	+	.	source_transcript=ENST00000403990.2;source_transcript_name=ZNF736P10Y-201;source_gene=ENSG00000216824.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000216824.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000403990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000403990.2;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P10Y;alternative_source_transcripts=ENST00000403990.2,ENST00000403990.2;transcript_id=HG00140_ch_T0000745;gene_id=HG00140_ch_G0000222;Parent=HG00140_ch_G0000222;transcript_name=HG00140_ch_T0000745;gene_name=ZNF736P10Y;ID=HG00140_ch_T0000745;Name=ZNF736P10Y
HG00140_chrY	CAT	exon	7725204	7726313	.	+	.	source_transcript=ENST00000403990.2;source_transcript_name=ZNF736P10Y-201;source_gene=ENSG00000216824.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000216824.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000403990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000403990.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P10Y;alternative_source_transcripts=ENST00000403990.2,ENST00000403990.2;transcript_id=HG00140_ch_T0000745;gene_id=HG00140_ch_G0000222;Parent=HG00140_ch_T0000745;transcript_name=HG00140_ch_T0000745;gene_name=ZNF736P10Y;ID=exon:HG00140_ch_T0000745:0;Name=ZNF736P10Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	7731050	7732067	.	+	.	source_gene_common_name=TRIM60P3Y;source_gene=ENSG00000227830.1;alternative_source_transcripts=ENST00000432201.1,ENST00000432201.1;gene_id=HG00140_ch_G0000223;gene_biotype=processed_pseudogene;gene_name=TRIM60P3Y;gene_sources=liftoff;ID=HG00140_ch_G0000223;Name=TRIM60P3Y
HG00140_chrY	CAT	transcript	7731050	7732067	1000	+	.	source_transcript=ENST00000432201.1;source_transcript_name=TRIM60P3Y-201;source_gene=ENSG00000227830.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227830.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000432201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432201.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P3Y;alternative_source_transcripts=ENST00000432201.1,ENST00000432201.1;transcript_id=HG00140_ch_T0000746;gene_id=HG00140_ch_G0000223;Parent=HG00140_ch_G0000223;transcript_name=HG00140_ch_T0000746;gene_name=TRIM60P3Y;ID=HG00140_ch_T0000746;Name=TRIM60P3Y
HG00140_chrY	CAT	exon	7731050	7731304	.	+	.	source_transcript=ENST00000432201.1;source_transcript_name=TRIM60P3Y-201;source_gene=ENSG00000227830.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227830.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000432201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432201.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P3Y;alternative_source_transcripts=ENST00000432201.1,ENST00000432201.1;transcript_id=HG00140_ch_T0000746;gene_id=HG00140_ch_G0000223;Parent=HG00140_ch_T0000746;transcript_name=HG00140_ch_T0000746;gene_name=TRIM60P3Y;ID=exon:HG00140_ch_T0000746:0;Name=TRIM60P3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7731305	7731649	.	+	.	source_transcript=ENST00000432201.1;source_transcript_name=TRIM60P3Y-201;source_gene=ENSG00000227830.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227830.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000432201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432201.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P3Y;alternative_source_transcripts=ENST00000432201.1,ENST00000432201.1;transcript_id=HG00140_ch_T0000746;gene_id=HG00140_ch_G0000223;Parent=HG00140_ch_T0000746;transcript_name=HG00140_ch_T0000746;gene_name=TRIM60P3Y;ID=intron:HG00140_ch_T0000746:0;Name=TRIM60P3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7731650	7732067	.	+	.	source_transcript=ENST00000432201.1;source_transcript_name=TRIM60P3Y-201;source_gene=ENSG00000227830.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227830.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000432201.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432201.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P3Y;alternative_source_transcripts=ENST00000432201.1,ENST00000432201.1;transcript_id=HG00140_ch_T0000746;gene_id=HG00140_ch_G0000223;Parent=HG00140_ch_T0000746;transcript_name=HG00140_ch_T0000746;gene_name=TRIM60P3Y;ID=exon:HG00140_ch_T0000746:1;Name=TRIM60P3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	7737704	7750063	.	-	.	source_gene_common_name=ENSG00000303338;source_gene=ENSG00000303338.1;alternative_source_transcripts=ENST00000793767.1,ENST00000793767.1;gene_id=HG00140_ch_G0000224;gene_biotype=lncRNA;gene_name=ENSG00000303338;gene_sources=liftoff;ID=HG00140_ch_G0000224;Name=ENSG00000303338
HG00140_chrY	CAT	transcript	7737704	7750031	1000	-	.	source_transcript=ENST00000793767.1;source_transcript_name=ENST00000793767;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793767.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793767.1,ENST00000793767.1;transcript_id=HG00140_ch_T0000747;gene_id=HG00140_ch_G0000224;Parent=HG00140_ch_G0000224;transcript_name=HG00140_ch_T0000747;gene_name=ENSG00000303338;ID=HG00140_ch_T0000747;Name=ENSG00000303338
HG00140_chrY	CAT	exon	7737704	7737977	.	-	.	source_transcript=ENST00000793767.1;source_transcript_name=ENST00000793767;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793767.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793767.1,ENST00000793767.1;transcript_id=HG00140_ch_T0000747;gene_id=HG00140_ch_G0000224;Parent=HG00140_ch_T0000747;transcript_name=HG00140_ch_T0000747;gene_name=ENSG00000303338;ID=exon:HG00140_ch_T0000747:0;Name=ENSG00000303338;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7737978	7741269	.	-	.	source_transcript=ENST00000793767.1;source_transcript_name=ENST00000793767;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793767.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793767.1,ENST00000793767.1;transcript_id=HG00140_ch_T0000747;gene_id=HG00140_ch_G0000224;Parent=HG00140_ch_T0000747;transcript_name=HG00140_ch_T0000747;gene_name=ENSG00000303338;ID=intron:HG00140_ch_T0000747:0;Name=ENSG00000303338;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7741270	7741422	.	-	.	source_transcript=ENST00000793767.1;source_transcript_name=ENST00000793767;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793767.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793767.1,ENST00000793767.1;transcript_id=HG00140_ch_T0000747;gene_id=HG00140_ch_G0000224;Parent=HG00140_ch_T0000747;transcript_name=HG00140_ch_T0000747;gene_name=ENSG00000303338;ID=exon:HG00140_ch_T0000747:1;Name=ENSG00000303338;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7741423	7742123	.	-	.	source_transcript=ENST00000793767.1;source_transcript_name=ENST00000793767;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793767.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793767.1,ENST00000793767.1;transcript_id=HG00140_ch_T0000747;gene_id=HG00140_ch_G0000224;Parent=HG00140_ch_T0000747;transcript_name=HG00140_ch_T0000747;gene_name=ENSG00000303338;ID=intron:HG00140_ch_T0000747:1;Name=ENSG00000303338;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7742124	7742377	.	-	.	source_transcript=ENST00000793767.1;source_transcript_name=ENST00000793767;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793767.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793767.1,ENST00000793767.1;transcript_id=HG00140_ch_T0000747;gene_id=HG00140_ch_G0000224;Parent=HG00140_ch_T0000747;transcript_name=HG00140_ch_T0000747;gene_name=ENSG00000303338;ID=exon:HG00140_ch_T0000747:2;Name=ENSG00000303338;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7742378	7749971	.	-	.	source_transcript=ENST00000793767.1;source_transcript_name=ENST00000793767;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793767.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793767.1,ENST00000793767.1;transcript_id=HG00140_ch_T0000747;gene_id=HG00140_ch_G0000224;Parent=HG00140_ch_T0000747;transcript_name=HG00140_ch_T0000747;gene_name=ENSG00000303338;ID=intron:HG00140_ch_T0000747:2;Name=ENSG00000303338;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7749972	7750031	.	-	.	source_transcript=ENST00000793767.1;source_transcript_name=ENST00000793767;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793767.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793767.1,ENST00000793767.1;transcript_id=HG00140_ch_T0000747;gene_id=HG00140_ch_G0000224;Parent=HG00140_ch_T0000747;transcript_name=HG00140_ch_T0000747;gene_name=ENSG00000303338;ID=exon:HG00140_ch_T0000747:3;Name=ENSG00000303338;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7742263	7750063	1000	-	.	source_transcript=ENST00000793768.1;source_transcript_name=ENST00000793768;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793768.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793768.1,ENST00000793768.1;transcript_id=HG00140_ch_T0000748;gene_id=HG00140_ch_G0000224;Parent=HG00140_ch_G0000224;transcript_name=HG00140_ch_T0000748;gene_name=ENSG00000303338;ID=HG00140_ch_T0000748;Name=ENSG00000303338
HG00140_chrY	CAT	exon	7742263	7742377	.	-	.	source_transcript=ENST00000793768.1;source_transcript_name=ENST00000793768;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793768.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793768.1,ENST00000793768.1;transcript_id=HG00140_ch_T0000748;gene_id=HG00140_ch_G0000224;Parent=HG00140_ch_T0000748;transcript_name=HG00140_ch_T0000748;gene_name=ENSG00000303338;ID=exon:HG00140_ch_T0000748:0;Name=ENSG00000303338;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7742378	7749971	.	-	.	source_transcript=ENST00000793768.1;source_transcript_name=ENST00000793768;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793768.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793768.1,ENST00000793768.1;transcript_id=HG00140_ch_T0000748;gene_id=HG00140_ch_G0000224;Parent=HG00140_ch_T0000748;transcript_name=HG00140_ch_T0000748;gene_name=ENSG00000303338;ID=intron:HG00140_ch_T0000748:0;Name=ENSG00000303338;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7749972	7750063	.	-	.	source_transcript=ENST00000793768.1;source_transcript_name=ENST00000793768;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793768.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793768.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793768.1,ENST00000793768.1;transcript_id=HG00140_ch_T0000748;gene_id=HG00140_ch_G0000224;Parent=HG00140_ch_T0000748;transcript_name=HG00140_ch_T0000748;gene_name=ENSG00000303338;ID=exon:HG00140_ch_T0000748:1;Name=ENSG00000303338;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7742268	7750057	1000	-	.	source_transcript=ENST00000793769.1;source_transcript_name=ENST00000793769;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793769.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793769.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793769.1,ENST00000793769.1;transcript_id=HG00140_ch_T0000749;gene_id=HG00140_ch_G0000224;Parent=HG00140_ch_G0000224;transcript_name=HG00140_ch_T0000749;gene_name=ENSG00000303338;ID=HG00140_ch_T0000749;Name=ENSG00000303338
HG00140_chrY	CAT	exon	7742268	7742377	.	-	.	source_transcript=ENST00000793769.1;source_transcript_name=ENST00000793769;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793769.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793769.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793769.1,ENST00000793769.1;transcript_id=HG00140_ch_T0000749;gene_id=HG00140_ch_G0000224;Parent=HG00140_ch_T0000749;transcript_name=HG00140_ch_T0000749;gene_name=ENSG00000303338;ID=exon:HG00140_ch_T0000749:0;Name=ENSG00000303338;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7742378	7744944	.	-	.	source_transcript=ENST00000793769.1;source_transcript_name=ENST00000793769;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793769.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793769.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793769.1,ENST00000793769.1;transcript_id=HG00140_ch_T0000749;gene_id=HG00140_ch_G0000224;Parent=HG00140_ch_T0000749;transcript_name=HG00140_ch_T0000749;gene_name=ENSG00000303338;ID=intron:HG00140_ch_T0000749:0;Name=ENSG00000303338;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7744945	7745030	.	-	.	source_transcript=ENST00000793769.1;source_transcript_name=ENST00000793769;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793769.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793769.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793769.1,ENST00000793769.1;transcript_id=HG00140_ch_T0000749;gene_id=HG00140_ch_G0000224;Parent=HG00140_ch_T0000749;transcript_name=HG00140_ch_T0000749;gene_name=ENSG00000303338;ID=exon:HG00140_ch_T0000749:1;Name=ENSG00000303338;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7745031	7749971	.	-	.	source_transcript=ENST00000793769.1;source_transcript_name=ENST00000793769;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793769.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793769.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793769.1,ENST00000793769.1;transcript_id=HG00140_ch_T0000749;gene_id=HG00140_ch_G0000224;Parent=HG00140_ch_T0000749;transcript_name=HG00140_ch_T0000749;gene_name=ENSG00000303338;ID=intron:HG00140_ch_T0000749:1;Name=ENSG00000303338;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7749972	7750057	.	-	.	source_transcript=ENST00000793769.1;source_transcript_name=ENST00000793769;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793769.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793769.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793769.1,ENST00000793769.1;transcript_id=HG00140_ch_T0000749;gene_id=HG00140_ch_G0000224;Parent=HG00140_ch_T0000749;transcript_name=HG00140_ch_T0000749;gene_name=ENSG00000303338;ID=exon:HG00140_ch_T0000749:2;Name=ENSG00000303338;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7744774	7750063	1000	-	.	source_transcript=ENST00000793770.1;source_transcript_name=ENST00000793770;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793770.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793770.1,ENST00000793770.1;transcript_id=HG00140_ch_T0000750;gene_id=HG00140_ch_G0000224;Parent=HG00140_ch_G0000224;transcript_name=HG00140_ch_T0000750;gene_name=ENSG00000303338;ID=HG00140_ch_T0000750;Name=ENSG00000303338
HG00140_chrY	CAT	exon	7744774	7745030	.	-	.	source_transcript=ENST00000793770.1;source_transcript_name=ENST00000793770;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793770.1,ENST00000793770.1;transcript_id=HG00140_ch_T0000750;gene_id=HG00140_ch_G0000224;Parent=HG00140_ch_T0000750;transcript_name=HG00140_ch_T0000750;gene_name=ENSG00000303338;ID=exon:HG00140_ch_T0000750:0;Name=ENSG00000303338;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7745031	7749971	.	-	.	source_transcript=ENST00000793770.1;source_transcript_name=ENST00000793770;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793770.1,ENST00000793770.1;transcript_id=HG00140_ch_T0000750;gene_id=HG00140_ch_G0000224;Parent=HG00140_ch_T0000750;transcript_name=HG00140_ch_T0000750;gene_name=ENSG00000303338;ID=intron:HG00140_ch_T0000750:0;Name=ENSG00000303338;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7749972	7750063	.	-	.	source_transcript=ENST00000793770.1;source_transcript_name=ENST00000793770;source_gene=ENSG00000303338.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303338.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793770.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303338;alternative_source_transcripts=ENST00000793770.1,ENST00000793770.1;transcript_id=HG00140_ch_T0000750;gene_id=HG00140_ch_G0000224;Parent=HG00140_ch_T0000750;transcript_name=HG00140_ch_T0000750;gene_name=ENSG00000303338;ID=exon:HG00140_ch_T0000750:1;Name=ENSG00000303338;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	7772394	7772863	.	-	.	source_gene_common_name=MTND2P3;source_gene=ENSG00000234850.1;alternative_source_transcripts=ENST00000452458.1,ENST00000452458.1;gene_id=HG00140_ch_G0000225;gene_biotype=processed_pseudogene;gene_name=MTND2P3;gene_sources=liftoff;ID=HG00140_ch_G0000225;Name=MTND2P3
HG00140_chrY	CAT	transcript	7772394	7772863	1000	-	.	source_transcript=ENST00000452458.1;source_transcript_name=MTND2P3-201;source_gene=ENSG00000234850.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234850.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000452458.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452458.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTND2P3;alternative_source_transcripts=ENST00000452458.1,ENST00000452458.1;transcript_id=HG00140_ch_T0000751;gene_id=HG00140_ch_G0000225;Parent=HG00140_ch_G0000225;transcript_name=HG00140_ch_T0000751;gene_name=MTND2P3;ID=HG00140_ch_T0000751;Name=MTND2P3
HG00140_chrY	CAT	exon	7772394	7772863	.	-	.	source_transcript=ENST00000452458.1;source_transcript_name=MTND2P3-201;source_gene=ENSG00000234850.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234850.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000452458.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452458.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTND2P3;alternative_source_transcripts=ENST00000452458.1,ENST00000452458.1;transcript_id=HG00140_ch_T0000751;gene_id=HG00140_ch_G0000225;Parent=HG00140_ch_T0000751;transcript_name=HG00140_ch_T0000751;gene_name=MTND2P3;ID=exon:HG00140_ch_T0000751:0;Name=MTND2P3;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	7773074	7773441	.	-	.	source_gene_common_name=MTND1P1;source_gene=ENSG00000226529.1;alternative_source_transcripts=ENST00000445453.1,ENST00000445453.1;gene_id=HG00140_ch_G0000226;gene_biotype=processed_pseudogene;gene_name=MTND1P1;gene_sources=liftoff;ID=HG00140_ch_G0000226;Name=MTND1P1
HG00140_chrY	CAT	transcript	7773074	7773441	1000	-	.	source_transcript=ENST00000445453.1;source_transcript_name=MTND1P1-201;source_gene=ENSG00000226529.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226529.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445453.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445453.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTND1P1;alternative_source_transcripts=ENST00000445453.1,ENST00000445453.1;transcript_id=HG00140_ch_T0000752;gene_id=HG00140_ch_G0000226;Parent=HG00140_ch_G0000226;transcript_name=HG00140_ch_T0000752;gene_name=MTND1P1;ID=HG00140_ch_T0000752;Name=MTND1P1
HG00140_chrY	CAT	exon	7773074	7773441	.	-	.	source_transcript=ENST00000445453.1;source_transcript_name=MTND1P1-201;source_gene=ENSG00000226529.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226529.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445453.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445453.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTND1P1;alternative_source_transcripts=ENST00000445453.1,ENST00000445453.1;transcript_id=HG00140_ch_T0000752;gene_id=HG00140_ch_G0000226;Parent=HG00140_ch_T0000752;transcript_name=HG00140_ch_T0000752;gene_name=MTND1P1;ID=exon:HG00140_ch_T0000752:0;Name=MTND1P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	7779954	7781064	.	-	.	source_gene_common_name=MTCYBP1;source_gene=ENSG00000234179.1;alternative_source_transcripts=ENST00000454315.1,ENST00000454315.1;gene_id=HG00140_ch_G0000227;gene_biotype=processed_pseudogene;gene_name=MTCYBP1;gene_sources=liftoff;ID=HG00140_ch_G0000227;Name=MTCYBP1
HG00140_chrY	CAT	transcript	7779954	7781064	1000	-	.	source_transcript=ENST00000454315.1;source_transcript_name=MTCYBP1-201;source_gene=ENSG00000234179.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234179.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000454315.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454315.1;transcript_score=198.481;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTCYBP1;alternative_source_transcripts=ENST00000454315.1,ENST00000454315.1;transcript_id=HG00140_ch_T0000753;gene_id=HG00140_ch_G0000227;Parent=HG00140_ch_G0000227;transcript_name=HG00140_ch_T0000753;gene_name=MTCYBP1;ID=HG00140_ch_T0000753;Name=MTCYBP1
HG00140_chrY	CAT	exon	7779954	7781064	.	-	.	source_transcript=ENST00000454315.1;source_transcript_name=MTCYBP1-201;source_gene=ENSG00000234179.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234179.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000454315.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454315.1;transcript_score=198.481;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTCYBP1;alternative_source_transcripts=ENST00000454315.1,ENST00000454315.1;transcript_id=HG00140_ch_T0000753;gene_id=HG00140_ch_G0000227;Parent=HG00140_ch_T0000753;transcript_name=HG00140_ch_T0000753;gene_name=MTCYBP1;ID=exon:HG00140_ch_T0000753:0;Name=MTCYBP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	7781137	7781560	.	+	.	source_gene_common_name=MTND6P1;source_gene=ENSG00000223955.1;alternative_source_transcripts=ENST00000417434.1,ENST00000417434.1;gene_id=HG00140_ch_G0000228;gene_biotype=processed_pseudogene;gene_name=MTND6P1;gene_sources=liftoff;ID=HG00140_ch_G0000228;Name=MTND6P1
HG00140_chrY	CAT	transcript	7781137	7781560	1000	+	.	source_transcript=ENST00000417434.1;source_transcript_name=MTND6P1-201;source_gene=ENSG00000223955.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000223955.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000417434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417434.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTND6P1;alternative_source_transcripts=ENST00000417434.1,ENST00000417434.1;transcript_id=HG00140_ch_T0000754;gene_id=HG00140_ch_G0000228;Parent=HG00140_ch_G0000228;transcript_name=HG00140_ch_T0000754;gene_name=MTND6P1;ID=HG00140_ch_T0000754;Name=MTND6P1
HG00140_chrY	CAT	exon	7781137	7781560	.	+	.	source_transcript=ENST00000417434.1;source_transcript_name=MTND6P1-201;source_gene=ENSG00000223955.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000223955.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000417434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417434.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTND6P1;alternative_source_transcripts=ENST00000417434.1,ENST00000417434.1;transcript_id=HG00140_ch_T0000754;gene_id=HG00140_ch_G0000228;Parent=HG00140_ch_T0000754;transcript_name=HG00140_ch_T0000754;gene_name=MTND6P1;ID=exon:HG00140_ch_T0000754:0;Name=MTND6P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	7792952	7794164	.	-	.	source_gene_common_name=ZNF736P6Y;source_gene=ENSG00000224634.1;alternative_source_transcripts=ENST00000447526.1,ENST00000447526.1;gene_id=HG00140_ch_G0000229;gene_biotype=processed_pseudogene;gene_name=ZNF736P6Y;gene_sources=liftoff;ID=HG00140_ch_G0000229;Name=ZNF736P6Y
HG00140_chrY	CAT	transcript	7792952	7794164	1000	-	.	source_transcript=ENST00000447526.1;source_transcript_name=ZNF736P6Y-201;source_gene=ENSG00000224634.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224634.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000447526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447526.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P6Y;alternative_source_transcripts=ENST00000447526.1,ENST00000447526.1;transcript_id=HG00140_ch_T0000755;gene_id=HG00140_ch_G0000229;Parent=HG00140_ch_G0000229;transcript_name=HG00140_ch_T0000755;gene_name=ZNF736P6Y;ID=HG00140_ch_T0000755;Name=ZNF736P6Y
HG00140_chrY	CAT	exon	7792952	7794164	.	-	.	source_transcript=ENST00000447526.1;source_transcript_name=ZNF736P6Y-201;source_gene=ENSG00000224634.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224634.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000447526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P6Y;alternative_source_transcripts=ENST00000447526.1,ENST00000447526.1;transcript_id=HG00140_ch_T0000755;gene_id=HG00140_ch_G0000229;Parent=HG00140_ch_T0000755;transcript_name=HG00140_ch_T0000755;gene_name=ZNF736P6Y;ID=exon:HG00140_ch_T0000755:0;Name=ZNF736P6Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	7862867	7864878	.	-	.	source_gene_common_name=TSPY24P;source_gene=ENSG00000215601.3;alternative_source_transcripts=ENST00000431340.1,ENST00000431340.1;gene_id=HG00140_ch_G0000230;gene_biotype=unprocessed_pseudogene;gene_name=TSPY24P;gene_sources=liftoff;ID=HG00140_ch_G0000230;Name=TSPY24P
HG00140_chrY	CAT	transcript	7862867	7864878	1000	-	.	source_transcript=ENST00000431340.1;source_transcript_name=TSPY24P-201;source_gene=ENSG00000215601.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000215601.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431340.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY24P;alternative_source_transcripts=ENST00000431340.1,ENST00000431340.1;transcript_id=HG00140_ch_T0000756;gene_id=HG00140_ch_G0000230;Parent=HG00140_ch_G0000230;transcript_name=HG00140_ch_T0000756;gene_name=TSPY24P;ID=HG00140_ch_T0000756;Name=TSPY24P
HG00140_chrY	CAT	exon	7862867	7862915	.	-	.	source_transcript=ENST00000431340.1;source_transcript_name=TSPY24P-201;source_gene=ENSG00000215601.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000215601.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431340.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY24P;alternative_source_transcripts=ENST00000431340.1,ENST00000431340.1;transcript_id=HG00140_ch_T0000756;gene_id=HG00140_ch_G0000230;Parent=HG00140_ch_T0000756;transcript_name=HG00140_ch_T0000756;gene_name=TSPY24P;ID=exon:HG00140_ch_T0000756:0;Name=TSPY24P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7862916	7863033	.	-	.	source_transcript=ENST00000431340.1;source_transcript_name=TSPY24P-201;source_gene=ENSG00000215601.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000215601.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431340.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY24P;alternative_source_transcripts=ENST00000431340.1,ENST00000431340.1;transcript_id=HG00140_ch_T0000756;gene_id=HG00140_ch_G0000230;Parent=HG00140_ch_T0000756;transcript_name=HG00140_ch_T0000756;gene_name=TSPY24P;ID=intron:HG00140_ch_T0000756:0;Name=TSPY24P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7863034	7863179	.	-	.	source_transcript=ENST00000431340.1;source_transcript_name=TSPY24P-201;source_gene=ENSG00000215601.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000215601.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431340.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY24P;alternative_source_transcripts=ENST00000431340.1,ENST00000431340.1;transcript_id=HG00140_ch_T0000756;gene_id=HG00140_ch_G0000230;Parent=HG00140_ch_T0000756;transcript_name=HG00140_ch_T0000756;gene_name=TSPY24P;ID=exon:HG00140_ch_T0000756:1;Name=TSPY24P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7863180	7863265	.	-	.	source_transcript=ENST00000431340.1;source_transcript_name=TSPY24P-201;source_gene=ENSG00000215601.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000215601.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431340.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY24P;alternative_source_transcripts=ENST00000431340.1,ENST00000431340.1;transcript_id=HG00140_ch_T0000756;gene_id=HG00140_ch_G0000230;Parent=HG00140_ch_T0000756;transcript_name=HG00140_ch_T0000756;gene_name=TSPY24P;ID=intron:HG00140_ch_T0000756:1;Name=TSPY24P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7863266	7863375	.	-	.	source_transcript=ENST00000431340.1;source_transcript_name=TSPY24P-201;source_gene=ENSG00000215601.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000215601.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431340.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY24P;alternative_source_transcripts=ENST00000431340.1,ENST00000431340.1;transcript_id=HG00140_ch_T0000756;gene_id=HG00140_ch_G0000230;Parent=HG00140_ch_T0000756;transcript_name=HG00140_ch_T0000756;gene_name=TSPY24P;ID=exon:HG00140_ch_T0000756:2;Name=TSPY24P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7863376	7864740	.	-	.	source_transcript=ENST00000431340.1;source_transcript_name=TSPY24P-201;source_gene=ENSG00000215601.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000215601.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431340.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY24P;alternative_source_transcripts=ENST00000431340.1,ENST00000431340.1;transcript_id=HG00140_ch_T0000756;gene_id=HG00140_ch_G0000230;Parent=HG00140_ch_T0000756;transcript_name=HG00140_ch_T0000756;gene_name=TSPY24P;ID=intron:HG00140_ch_T0000756:2;Name=TSPY24P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7864741	7864878	.	-	.	source_transcript=ENST00000431340.1;source_transcript_name=TSPY24P-201;source_gene=ENSG00000215601.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000215601.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431340.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY24P;alternative_source_transcripts=ENST00000431340.1,ENST00000431340.1;transcript_id=HG00140_ch_T0000756;gene_id=HG00140_ch_G0000230;Parent=HG00140_ch_T0000756;transcript_name=HG00140_ch_T0000756;gene_name=TSPY24P;ID=exon:HG00140_ch_T0000756:3;Name=TSPY24P;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	7867888	7880623	.	+	.	source_gene_common_name=RBMY2KP;source_gene=ENSG00000225809.1;alternative_source_transcripts=ENST00000418221.1;gene_id=HG00140_ch_G0000231;gene_biotype=unprocessed_pseudogene;gene_name=RBMY2KP;gene_sources=liftoff,transMap;ID=HG00140_ch_G0000231;Name=RBMY2KP
HG00140_chrY	CAT	transcript	7867888	7880623	1000	+	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=HG00140_ch_T0000757;gene_id=HG00140_ch_G0000231;Parent=HG00140_ch_G0000231;transcript_name=HG00140_ch_T0000757;gene_name=RBMY2KP;ID=HG00140_ch_T0000757;Name=RBMY2KP
HG00140_chrY	CAT	exon	7867888	7867995	.	+	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=HG00140_ch_T0000757;gene_id=HG00140_ch_G0000231;Parent=HG00140_ch_T0000757;transcript_name=HG00140_ch_T0000757;gene_name=RBMY2KP;ID=exon:HG00140_ch_T0000757:0;Name=RBMY2KP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7867996	7868419	.	+	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=HG00140_ch_T0000757;gene_id=HG00140_ch_G0000231;Parent=HG00140_ch_T0000757;transcript_name=HG00140_ch_T0000757;gene_name=RBMY2KP;ID=intron:HG00140_ch_T0000757:0;Name=RBMY2KP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7868420	7868522	.	+	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=HG00140_ch_T0000757;gene_id=HG00140_ch_G0000231;Parent=HG00140_ch_T0000757;transcript_name=HG00140_ch_T0000757;gene_name=RBMY2KP;ID=exon:HG00140_ch_T0000757:1;Name=RBMY2KP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7868523	7873642	.	+	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=HG00140_ch_T0000757;gene_id=HG00140_ch_G0000231;Parent=HG00140_ch_T0000757;transcript_name=HG00140_ch_T0000757;gene_name=RBMY2KP;ID=intron:HG00140_ch_T0000757:1;Name=RBMY2KP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7873643	7873792	.	+	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=HG00140_ch_T0000757;gene_id=HG00140_ch_G0000231;Parent=HG00140_ch_T0000757;transcript_name=HG00140_ch_T0000757;gene_name=RBMY2KP;ID=exon:HG00140_ch_T0000757:2;Name=RBMY2KP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7873793	7878642	.	+	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=HG00140_ch_T0000757;gene_id=HG00140_ch_G0000231;Parent=HG00140_ch_T0000757;transcript_name=HG00140_ch_T0000757;gene_name=RBMY2KP;ID=intron:HG00140_ch_T0000757:2;Name=RBMY2KP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7878643	7878757	.	+	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=HG00140_ch_T0000757;gene_id=HG00140_ch_G0000231;Parent=HG00140_ch_T0000757;transcript_name=HG00140_ch_T0000757;gene_name=RBMY2KP;ID=exon:HG00140_ch_T0000757:3;Name=RBMY2KP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7878758	7879627	.	+	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=HG00140_ch_T0000757;gene_id=HG00140_ch_G0000231;Parent=HG00140_ch_T0000757;transcript_name=HG00140_ch_T0000757;gene_name=RBMY2KP;ID=intron:HG00140_ch_T0000757:3;Name=RBMY2KP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7879628	7879897	.	+	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=HG00140_ch_T0000757;gene_id=HG00140_ch_G0000231;Parent=HG00140_ch_T0000757;transcript_name=HG00140_ch_T0000757;gene_name=RBMY2KP;ID=exon:HG00140_ch_T0000757:4;Name=RBMY2KP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7879898	7880306	.	+	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=HG00140_ch_T0000757;gene_id=HG00140_ch_G0000231;Parent=HG00140_ch_T0000757;transcript_name=HG00140_ch_T0000757;gene_name=RBMY2KP;ID=intron:HG00140_ch_T0000757:4;Name=RBMY2KP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7880307	7880623	.	+	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=transMap;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;alternative_source_transcripts=ENST00000418221.1;transcript_id=HG00140_ch_T0000757;gene_id=HG00140_ch_G0000231;Parent=HG00140_ch_T0000757;transcript_name=HG00140_ch_T0000757;gene_name=RBMY2KP;ID=exon:HG00140_ch_T0000757:5;Name=RBMY2KP;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	7867888	7880623	1000	+	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=HG00140_ch_T0000758;gene_id=HG00140_ch_G0000231;Parent=HG00140_ch_G0000231;transcript_name=HG00140_ch_T0000758;gene_name=RBMY2KP;ID=HG00140_ch_T0000758;Name=RBMY2KP
HG00140_chrY	CAT	exon	7867888	7867995	.	+	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=HG00140_ch_T0000758;gene_id=HG00140_ch_G0000231;Parent=HG00140_ch_T0000758;transcript_name=HG00140_ch_T0000758;gene_name=RBMY2KP;ID=exon:HG00140_ch_T0000758:0;Name=RBMY2KP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7867996	7868419	.	+	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=HG00140_ch_T0000758;gene_id=HG00140_ch_G0000231;Parent=HG00140_ch_T0000758;transcript_name=HG00140_ch_T0000758;gene_name=RBMY2KP;ID=intron:HG00140_ch_T0000758:0;Name=RBMY2KP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7868420	7868522	.	+	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=HG00140_ch_T0000758;gene_id=HG00140_ch_G0000231;Parent=HG00140_ch_T0000758;transcript_name=HG00140_ch_T0000758;gene_name=RBMY2KP;ID=exon:HG00140_ch_T0000758:1;Name=RBMY2KP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7868523	7873642	.	+	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=HG00140_ch_T0000758;gene_id=HG00140_ch_G0000231;Parent=HG00140_ch_T0000758;transcript_name=HG00140_ch_T0000758;gene_name=RBMY2KP;ID=intron:HG00140_ch_T0000758:1;Name=RBMY2KP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7873643	7873792	.	+	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=HG00140_ch_T0000758;gene_id=HG00140_ch_G0000231;Parent=HG00140_ch_T0000758;transcript_name=HG00140_ch_T0000758;gene_name=RBMY2KP;ID=exon:HG00140_ch_T0000758:2;Name=RBMY2KP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7873793	7878642	.	+	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=HG00140_ch_T0000758;gene_id=HG00140_ch_G0000231;Parent=HG00140_ch_T0000758;transcript_name=HG00140_ch_T0000758;gene_name=RBMY2KP;ID=intron:HG00140_ch_T0000758:2;Name=RBMY2KP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7878643	7878757	.	+	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=HG00140_ch_T0000758;gene_id=HG00140_ch_G0000231;Parent=HG00140_ch_T0000758;transcript_name=HG00140_ch_T0000758;gene_name=RBMY2KP;ID=exon:HG00140_ch_T0000758:3;Name=RBMY2KP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7878758	7879627	.	+	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=HG00140_ch_T0000758;gene_id=HG00140_ch_G0000231;Parent=HG00140_ch_T0000758;transcript_name=HG00140_ch_T0000758;gene_name=RBMY2KP;ID=intron:HG00140_ch_T0000758:3;Name=RBMY2KP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7879628	7879738	.	+	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=HG00140_ch_T0000758;gene_id=HG00140_ch_G0000231;Parent=HG00140_ch_T0000758;transcript_name=HG00140_ch_T0000758;gene_name=RBMY2KP;ID=exon:HG00140_ch_T0000758:4;Name=RBMY2KP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7879739	7879809	.	+	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=HG00140_ch_T0000758;gene_id=HG00140_ch_G0000231;Parent=HG00140_ch_T0000758;transcript_name=HG00140_ch_T0000758;gene_name=RBMY2KP;ID=intron:HG00140_ch_T0000758:4;Name=RBMY2KP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7879810	7879897	.	+	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=HG00140_ch_T0000758;gene_id=HG00140_ch_G0000231;Parent=HG00140_ch_T0000758;transcript_name=HG00140_ch_T0000758;gene_name=RBMY2KP;ID=exon:HG00140_ch_T0000758:5;Name=RBMY2KP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7879898	7880306	.	+	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=HG00140_ch_T0000758;gene_id=HG00140_ch_G0000231;Parent=HG00140_ch_T0000758;transcript_name=HG00140_ch_T0000758;gene_name=RBMY2KP;ID=intron:HG00140_ch_T0000758:5;Name=RBMY2KP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	7880307	7880623	.	+	.	source_transcript=ENST00000418221.1;source_transcript_name=RBMY2KP-201;source_gene=ENSG00000225809.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225809.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418221.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418221.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2KP;transcript_id=HG00140_ch_T0000758;gene_id=HG00140_ch_G0000231;Parent=HG00140_ch_T0000758;transcript_name=HG00140_ch_T0000758;gene_name=RBMY2KP;ID=exon:HG00140_ch_T0000758:6;Name=RBMY2KP;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	7993379	8002858	.	+	.	source_gene_common_name=ENSG00000299844;source_gene=ENSG00000299844.1;alternative_source_transcripts=ENST00000766734.1,ENST00000766734.1;gene_id=HG00140_ch_G0000232;gene_biotype=lncRNA;gene_name=ENSG00000299844;gene_sources=liftoff;ID=HG00140_ch_G0000232;Name=ENSG00000299844
HG00140_chrY	CAT	transcript	7993379	8002858	1000	+	.	source_transcript=ENST00000766734.1;source_transcript_name=ENST00000766734;source_gene=ENSG00000299844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766734.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299844;alternative_source_transcripts=ENST00000766734.1,ENST00000766734.1;transcript_id=HG00140_ch_T0000759;gene_id=HG00140_ch_G0000232;Parent=HG00140_ch_G0000232;transcript_name=HG00140_ch_T0000759;gene_name=ENSG00000299844;ID=HG00140_ch_T0000759;Name=ENSG00000299844
HG00140_chrY	CAT	exon	7993379	7993443	.	+	.	source_transcript=ENST00000766734.1;source_transcript_name=ENST00000766734;source_gene=ENSG00000299844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766734.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299844;alternative_source_transcripts=ENST00000766734.1,ENST00000766734.1;transcript_id=HG00140_ch_T0000759;gene_id=HG00140_ch_G0000232;Parent=HG00140_ch_T0000759;transcript_name=HG00140_ch_T0000759;gene_name=ENSG00000299844;ID=exon:HG00140_ch_T0000759:0;Name=ENSG00000299844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	7993444	8000702	.	+	.	source_transcript=ENST00000766734.1;source_transcript_name=ENST00000766734;source_gene=ENSG00000299844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766734.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299844;alternative_source_transcripts=ENST00000766734.1,ENST00000766734.1;transcript_id=HG00140_ch_T0000759;gene_id=HG00140_ch_G0000232;Parent=HG00140_ch_T0000759;transcript_name=HG00140_ch_T0000759;gene_name=ENSG00000299844;ID=intron:HG00140_ch_T0000759:0;Name=ENSG00000299844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8000703	8000810	.	+	.	source_transcript=ENST00000766734.1;source_transcript_name=ENST00000766734;source_gene=ENSG00000299844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766734.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299844;alternative_source_transcripts=ENST00000766734.1,ENST00000766734.1;transcript_id=HG00140_ch_T0000759;gene_id=HG00140_ch_G0000232;Parent=HG00140_ch_T0000759;transcript_name=HG00140_ch_T0000759;gene_name=ENSG00000299844;ID=exon:HG00140_ch_T0000759:1;Name=ENSG00000299844;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8000811	8002710	.	+	.	source_transcript=ENST00000766734.1;source_transcript_name=ENST00000766734;source_gene=ENSG00000299844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766734.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299844;alternative_source_transcripts=ENST00000766734.1,ENST00000766734.1;transcript_id=HG00140_ch_T0000759;gene_id=HG00140_ch_G0000232;Parent=HG00140_ch_T0000759;transcript_name=HG00140_ch_T0000759;gene_name=ENSG00000299844;ID=intron:HG00140_ch_T0000759:1;Name=ENSG00000299844;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8002711	8002858	.	+	.	source_transcript=ENST00000766734.1;source_transcript_name=ENST00000766734;source_gene=ENSG00000299844.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299844.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766734.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299844;alternative_source_transcripts=ENST00000766734.1,ENST00000766734.1;transcript_id=HG00140_ch_T0000759;gene_id=HG00140_ch_G0000232;Parent=HG00140_ch_T0000759;transcript_name=HG00140_ch_T0000759;gene_name=ENSG00000299844;ID=exon:HG00140_ch_T0000759:2;Name=ENSG00000299844;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	8000836	8017909	.	-	.	source_gene_common_name=RBMY2JP;source_gene=ENSG00000227204.1;gene_id=HG00140_ch_G0000233;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY2JP;gene_sources=liftoff;ID=HG00140_ch_G0000233;Name=RBMY2JP
HG00140_chrY	CAT	transcript	8000836	8017909	1000	-	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG00140_ch_T0000760;gene_id=HG00140_ch_G0000233;Parent=HG00140_ch_G0000233;transcript_name=HG00140_ch_T0000760;gene_name=RBMY2JP;ID=HG00140_ch_T0000760;Name=RBMY2JP
HG00140_chrY	CAT	exon	8000836	8001137	.	-	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG00140_ch_T0000760;gene_id=HG00140_ch_G0000233;Parent=HG00140_ch_T0000760;transcript_name=HG00140_ch_T0000760;gene_name=RBMY2JP;ID=exon:HG00140_ch_T0000760:0;Name=RBMY2JP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8001138	8001551	.	-	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG00140_ch_T0000760;gene_id=HG00140_ch_G0000233;Parent=HG00140_ch_T0000760;transcript_name=HG00140_ch_T0000760;gene_name=RBMY2JP;ID=intron:HG00140_ch_T0000760:0;Name=RBMY2JP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8001552	8001645	.	-	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG00140_ch_T0000760;gene_id=HG00140_ch_G0000233;Parent=HG00140_ch_T0000760;transcript_name=HG00140_ch_T0000760;gene_name=RBMY2JP;ID=exon:HG00140_ch_T0000760:1;Name=RBMY2JP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8001646	8001724	.	-	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG00140_ch_T0000760;gene_id=HG00140_ch_G0000233;Parent=HG00140_ch_T0000760;transcript_name=HG00140_ch_T0000760;gene_name=RBMY2JP;ID=intron:HG00140_ch_T0000760:1;Name=RBMY2JP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8001725	8001831	.	-	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG00140_ch_T0000760;gene_id=HG00140_ch_G0000233;Parent=HG00140_ch_T0000760;transcript_name=HG00140_ch_T0000760;gene_name=RBMY2JP;ID=exon:HG00140_ch_T0000760:2;Name=RBMY2JP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8001832	8002700	.	-	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG00140_ch_T0000760;gene_id=HG00140_ch_G0000233;Parent=HG00140_ch_T0000760;transcript_name=HG00140_ch_T0000760;gene_name=RBMY2JP;ID=intron:HG00140_ch_T0000760:2;Name=RBMY2JP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8002701	8002813	.	-	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG00140_ch_T0000760;gene_id=HG00140_ch_G0000233;Parent=HG00140_ch_T0000760;transcript_name=HG00140_ch_T0000760;gene_name=RBMY2JP;ID=exon:HG00140_ch_T0000760:3;Name=RBMY2JP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8002814	8010876	.	-	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG00140_ch_T0000760;gene_id=HG00140_ch_G0000233;Parent=HG00140_ch_T0000760;transcript_name=HG00140_ch_T0000760;gene_name=RBMY2JP;ID=intron:HG00140_ch_T0000760:3;Name=RBMY2JP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8010877	8010913	.	-	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG00140_ch_T0000760;gene_id=HG00140_ch_G0000233;Parent=HG00140_ch_T0000760;transcript_name=HG00140_ch_T0000760;gene_name=RBMY2JP;ID=exon:HG00140_ch_T0000760:4;Name=RBMY2JP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8010914	8011238	.	-	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG00140_ch_T0000760;gene_id=HG00140_ch_G0000233;Parent=HG00140_ch_T0000760;transcript_name=HG00140_ch_T0000760;gene_name=RBMY2JP;ID=intron:HG00140_ch_T0000760:4;Name=RBMY2JP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8011239	8011354	.	-	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG00140_ch_T0000760;gene_id=HG00140_ch_G0000233;Parent=HG00140_ch_T0000760;transcript_name=HG00140_ch_T0000760;gene_name=RBMY2JP;ID=exon:HG00140_ch_T0000760:5;Name=RBMY2JP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8011355	8013213	.	-	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG00140_ch_T0000760;gene_id=HG00140_ch_G0000233;Parent=HG00140_ch_T0000760;transcript_name=HG00140_ch_T0000760;gene_name=RBMY2JP;ID=intron:HG00140_ch_T0000760:5;Name=RBMY2JP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8013214	8013391	.	-	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG00140_ch_T0000760;gene_id=HG00140_ch_G0000233;Parent=HG00140_ch_T0000760;transcript_name=HG00140_ch_T0000760;gene_name=RBMY2JP;ID=exon:HG00140_ch_T0000760:6;Name=RBMY2JP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8013392	8015803	.	-	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG00140_ch_T0000760;gene_id=HG00140_ch_G0000233;Parent=HG00140_ch_T0000760;transcript_name=HG00140_ch_T0000760;gene_name=RBMY2JP;ID=intron:HG00140_ch_T0000760:6;Name=RBMY2JP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8015804	8015806	.	-	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG00140_ch_T0000760;gene_id=HG00140_ch_G0000233;Parent=HG00140_ch_T0000760;transcript_name=HG00140_ch_T0000760;gene_name=RBMY2JP;ID=exon:HG00140_ch_T0000760:7;Name=RBMY2JP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8015807	8017800	.	-	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG00140_ch_T0000760;gene_id=HG00140_ch_G0000233;Parent=HG00140_ch_T0000760;transcript_name=HG00140_ch_T0000760;gene_name=RBMY2JP;ID=intron:HG00140_ch_T0000760:7;Name=RBMY2JP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8017801	8017909	.	-	.	source_transcript=ENST00000425544.1;source_transcript_name=RBMY2JP-201;source_gene=ENSG00000227204.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227204.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000425544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2JP;transcript_id=HG00140_ch_T0000760;gene_id=HG00140_ch_G0000233;Parent=HG00140_ch_T0000760;transcript_name=HG00140_ch_T0000760;gene_name=RBMY2JP;ID=exon:HG00140_ch_T0000760:8;Name=RBMY2JP;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	8001325	8016600	.	-	.	source_gene_common_name=ENSG00000299821;source_gene=ENSG00000299821.1;gene_id=HG00140_ch_G0000234;gene_biotype=lncRNA;gene_name=ENSG00000299821;gene_sources=liftoff;ID=HG00140_ch_G0000234;Name=ENSG00000299821
HG00140_chrY	CAT	transcript	8001325	8016600	1000	-	.	source_transcript=ENST00000766670.1;source_transcript_name=ENST00000766670;source_gene=ENSG00000299821.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299821.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766670.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299821;transcript_id=HG00140_ch_T0000761;gene_id=HG00140_ch_G0000234;Parent=HG00140_ch_G0000234;transcript_name=HG00140_ch_T0000761;gene_name=ENSG00000299821;ID=HG00140_ch_T0000761;Name=ENSG00000299821
HG00140_chrY	CAT	exon	8001325	8001640	.	-	.	source_transcript=ENST00000766670.1;source_transcript_name=ENST00000766670;source_gene=ENSG00000299821.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299821.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766670.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299821;transcript_id=HG00140_ch_T0000761;gene_id=HG00140_ch_G0000234;Parent=HG00140_ch_T0000761;transcript_name=HG00140_ch_T0000761;gene_name=ENSG00000299821;ID=exon:HG00140_ch_T0000761:0;Name=ENSG00000299821;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8001641	8004078	.	-	.	source_transcript=ENST00000766670.1;source_transcript_name=ENST00000766670;source_gene=ENSG00000299821.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299821.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766670.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299821;transcript_id=HG00140_ch_T0000761;gene_id=HG00140_ch_G0000234;Parent=HG00140_ch_T0000761;transcript_name=HG00140_ch_T0000761;gene_name=ENSG00000299821;ID=intron:HG00140_ch_T0000761:0;Name=ENSG00000299821;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8004079	8004239	.	-	.	source_transcript=ENST00000766670.1;source_transcript_name=ENST00000766670;source_gene=ENSG00000299821.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299821.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766670.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299821;transcript_id=HG00140_ch_T0000761;gene_id=HG00140_ch_G0000234;Parent=HG00140_ch_T0000761;transcript_name=HG00140_ch_T0000761;gene_name=ENSG00000299821;ID=exon:HG00140_ch_T0000761:1;Name=ENSG00000299821;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8004240	8015950	.	-	.	source_transcript=ENST00000766670.1;source_transcript_name=ENST00000766670;source_gene=ENSG00000299821.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299821.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766670.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299821;transcript_id=HG00140_ch_T0000761;gene_id=HG00140_ch_G0000234;Parent=HG00140_ch_T0000761;transcript_name=HG00140_ch_T0000761;gene_name=ENSG00000299821;ID=intron:HG00140_ch_T0000761:1;Name=ENSG00000299821;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8015951	8016600	.	-	.	source_transcript=ENST00000766670.1;source_transcript_name=ENST00000766670;source_gene=ENSG00000299821.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299821.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766670.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299821;transcript_id=HG00140_ch_T0000761;gene_id=HG00140_ch_G0000234;Parent=HG00140_ch_T0000761;transcript_name=HG00140_ch_T0000761;gene_name=ENSG00000299821;ID=exon:HG00140_ch_T0000761:2;Name=ENSG00000299821;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	8018705	8076594	.	+	.	source_gene_common_name=ENSG00000293305;source_gene=ENSG00000293305.2;gene_id=HG00140_ch_G0000235;gene_biotype=lncRNA;gene_name=ENSG00000293305;gene_sources=liftoff;ID=HG00140_ch_G0000235;Name=ENSG00000293305
HG00140_chrY	CAT	transcript	8018705	8075162	1000	+	.	source_transcript=ENST00000700787.2;source_transcript_name=ENST00000700787;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700787.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700787.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000762;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_G0000235;transcript_name=HG00140_ch_T0000762;gene_name=ENSG00000293305;ID=HG00140_ch_T0000762;Name=ENSG00000293305
HG00140_chrY	CAT	exon	8018705	8018981	.	+	.	source_transcript=ENST00000700787.2;source_transcript_name=ENST00000700787;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700787.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700787.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000762;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_T0000762;transcript_name=HG00140_ch_T0000762;gene_name=ENSG00000293305;ID=exon:HG00140_ch_T0000762:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8018982	8033074	.	+	.	source_transcript=ENST00000700787.2;source_transcript_name=ENST00000700787;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700787.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700787.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000762;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_T0000762;transcript_name=HG00140_ch_T0000762;gene_name=ENSG00000293305;ID=intron:HG00140_ch_T0000762:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8033075	8033189	.	+	.	source_transcript=ENST00000700787.2;source_transcript_name=ENST00000700787;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700787.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700787.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000762;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_T0000762;transcript_name=HG00140_ch_T0000762;gene_name=ENSG00000293305;ID=exon:HG00140_ch_T0000762:1;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8033190	8067864	.	+	.	source_transcript=ENST00000700787.2;source_transcript_name=ENST00000700787;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700787.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700787.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000762;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_T0000762;transcript_name=HG00140_ch_T0000762;gene_name=ENSG00000293305;ID=intron:HG00140_ch_T0000762:1;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8067865	8068049	.	+	.	source_transcript=ENST00000700787.2;source_transcript_name=ENST00000700787;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700787.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700787.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000762;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_T0000762;transcript_name=HG00140_ch_T0000762;gene_name=ENSG00000293305;ID=exon:HG00140_ch_T0000762:2;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8068050	8074921	.	+	.	source_transcript=ENST00000700787.2;source_transcript_name=ENST00000700787;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700787.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700787.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000762;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_T0000762;transcript_name=HG00140_ch_T0000762;gene_name=ENSG00000293305;ID=intron:HG00140_ch_T0000762:2;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8074922	8075162	.	+	.	source_transcript=ENST00000700787.2;source_transcript_name=ENST00000700787;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700787.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700787.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000762;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_T0000762;transcript_name=HG00140_ch_T0000762;gene_name=ENSG00000293305;ID=exon:HG00140_ch_T0000762:3;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	8018746	8076594	1000	+	.	source_transcript=ENST00000651148.1;source_transcript_name=ENST00000651148;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651148.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000763;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_G0000235;transcript_name=HG00140_ch_T0000763;gene_name=ENSG00000293305;ID=HG00140_ch_T0000763;Name=ENSG00000293305
HG00140_chrY	CAT	exon	8018746	8018955	.	+	.	source_transcript=ENST00000651148.1;source_transcript_name=ENST00000651148;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000763;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_T0000763;transcript_name=HG00140_ch_T0000763;gene_name=ENSG00000293305;ID=exon:HG00140_ch_T0000763:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8018956	8033074	.	+	.	source_transcript=ENST00000651148.1;source_transcript_name=ENST00000651148;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000763;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_T0000763;transcript_name=HG00140_ch_T0000763;gene_name=ENSG00000293305;ID=intron:HG00140_ch_T0000763:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8033075	8033189	.	+	.	source_transcript=ENST00000651148.1;source_transcript_name=ENST00000651148;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000763;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_T0000763;transcript_name=HG00140_ch_T0000763;gene_name=ENSG00000293305;ID=exon:HG00140_ch_T0000763:1;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8033190	8067864	.	+	.	source_transcript=ENST00000651148.1;source_transcript_name=ENST00000651148;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000763;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_T0000763;transcript_name=HG00140_ch_T0000763;gene_name=ENSG00000293305;ID=intron:HG00140_ch_T0000763:1;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8067865	8068049	.	+	.	source_transcript=ENST00000651148.1;source_transcript_name=ENST00000651148;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000763;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_T0000763;transcript_name=HG00140_ch_T0000763;gene_name=ENSG00000293305;ID=exon:HG00140_ch_T0000763:2;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8068050	8074921	.	+	.	source_transcript=ENST00000651148.1;source_transcript_name=ENST00000651148;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000763;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_T0000763;transcript_name=HG00140_ch_T0000763;gene_name=ENSG00000293305;ID=intron:HG00140_ch_T0000763:2;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8074922	8076594	.	+	.	source_transcript=ENST00000651148.1;source_transcript_name=ENST00000651148;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000763;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_T0000763;transcript_name=HG00140_ch_T0000763;gene_name=ENSG00000293305;ID=exon:HG00140_ch_T0000763:3;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	8018747	8075167	1000	+	.	source_transcript=ENST00000726686.1;source_transcript_name=ENST00000726686;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726686.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000764;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_G0000235;transcript_name=HG00140_ch_T0000764;gene_name=ENSG00000293305;ID=HG00140_ch_T0000764;Name=ENSG00000293305
HG00140_chrY	CAT	exon	8018747	8018981	.	+	.	source_transcript=ENST00000726686.1;source_transcript_name=ENST00000726686;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726686.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000764;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_T0000764;transcript_name=HG00140_ch_T0000764;gene_name=ENSG00000293305;ID=exon:HG00140_ch_T0000764:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8018982	8033074	.	+	.	source_transcript=ENST00000726686.1;source_transcript_name=ENST00000726686;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726686.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000764;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_T0000764;transcript_name=HG00140_ch_T0000764;gene_name=ENSG00000293305;ID=intron:HG00140_ch_T0000764:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8033075	8033189	.	+	.	source_transcript=ENST00000726686.1;source_transcript_name=ENST00000726686;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726686.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000764;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_T0000764;transcript_name=HG00140_ch_T0000764;gene_name=ENSG00000293305;ID=exon:HG00140_ch_T0000764:1;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8033190	8074921	.	+	.	source_transcript=ENST00000726686.1;source_transcript_name=ENST00000726686;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726686.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000764;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_T0000764;transcript_name=HG00140_ch_T0000764;gene_name=ENSG00000293305;ID=intron:HG00140_ch_T0000764:1;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8074922	8075167	.	+	.	source_transcript=ENST00000726686.1;source_transcript_name=ENST00000726686;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726686.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726686.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000764;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_T0000764;transcript_name=HG00140_ch_T0000764;gene_name=ENSG00000293305;ID=exon:HG00140_ch_T0000764:2;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	8018758	8075162	1000	+	.	source_transcript=ENST00000726687.1;source_transcript_name=ENST00000726687;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726687.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000765;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_G0000235;transcript_name=HG00140_ch_T0000765;gene_name=ENSG00000293305;ID=HG00140_ch_T0000765;Name=ENSG00000293305
HG00140_chrY	CAT	exon	8018758	8018981	.	+	.	source_transcript=ENST00000726687.1;source_transcript_name=ENST00000726687;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726687.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000765;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_T0000765;transcript_name=HG00140_ch_T0000765;gene_name=ENSG00000293305;ID=exon:HG00140_ch_T0000765:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8018982	8074921	.	+	.	source_transcript=ENST00000726687.1;source_transcript_name=ENST00000726687;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726687.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000765;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_T0000765;transcript_name=HG00140_ch_T0000765;gene_name=ENSG00000293305;ID=intron:HG00140_ch_T0000765:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8074922	8075162	.	+	.	source_transcript=ENST00000726687.1;source_transcript_name=ENST00000726687;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726687.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000765;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_T0000765;transcript_name=HG00140_ch_T0000765;gene_name=ENSG00000293305;ID=exon:HG00140_ch_T0000765:1;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	8018796	8075158	1000	+	.	source_transcript=ENST00000726689.1;source_transcript_name=ENST00000726689;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726689.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000766;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_G0000235;transcript_name=HG00140_ch_T0000766;gene_name=ENSG00000293305;ID=HG00140_ch_T0000766;Name=ENSG00000293305
HG00140_chrY	CAT	exon	8018796	8018981	.	+	.	source_transcript=ENST00000726689.1;source_transcript_name=ENST00000726689;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726689.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000766;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_T0000766;transcript_name=HG00140_ch_T0000766;gene_name=ENSG00000293305;ID=exon:HG00140_ch_T0000766:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8018982	8067864	.	+	.	source_transcript=ENST00000726689.1;source_transcript_name=ENST00000726689;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726689.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000766;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_T0000766;transcript_name=HG00140_ch_T0000766;gene_name=ENSG00000293305;ID=intron:HG00140_ch_T0000766:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8067865	8067987	.	+	.	source_transcript=ENST00000726689.1;source_transcript_name=ENST00000726689;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726689.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000766;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_T0000766;transcript_name=HG00140_ch_T0000766;gene_name=ENSG00000293305;ID=exon:HG00140_ch_T0000766:1;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8067988	8074921	.	+	.	source_transcript=ENST00000726689.1;source_transcript_name=ENST00000726689;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726689.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000766;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_T0000766;transcript_name=HG00140_ch_T0000766;gene_name=ENSG00000293305;ID=intron:HG00140_ch_T0000766:1;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8074922	8075158	.	+	.	source_transcript=ENST00000726689.1;source_transcript_name=ENST00000726689;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726689.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726689.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000766;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_T0000766;transcript_name=HG00140_ch_T0000766;gene_name=ENSG00000293305;ID=exon:HG00140_ch_T0000766:2;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	8018796	8075162	1000	+	.	source_transcript=ENST00000726688.1;source_transcript_name=ENST00000726688;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726688.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000767;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_G0000235;transcript_name=HG00140_ch_T0000767;gene_name=ENSG00000293305;ID=HG00140_ch_T0000767;Name=ENSG00000293305
HG00140_chrY	CAT	exon	8018796	8018981	.	+	.	source_transcript=ENST00000726688.1;source_transcript_name=ENST00000726688;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726688.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000767;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_T0000767;transcript_name=HG00140_ch_T0000767;gene_name=ENSG00000293305;ID=exon:HG00140_ch_T0000767:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8018982	8067864	.	+	.	source_transcript=ENST00000726688.1;source_transcript_name=ENST00000726688;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726688.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000767;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_T0000767;transcript_name=HG00140_ch_T0000767;gene_name=ENSG00000293305;ID=intron:HG00140_ch_T0000767:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8067865	8068049	.	+	.	source_transcript=ENST00000726688.1;source_transcript_name=ENST00000726688;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726688.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000767;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_T0000767;transcript_name=HG00140_ch_T0000767;gene_name=ENSG00000293305;ID=exon:HG00140_ch_T0000767:1;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8068050	8074921	.	+	.	source_transcript=ENST00000726688.1;source_transcript_name=ENST00000726688;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726688.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000767;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_T0000767;transcript_name=HG00140_ch_T0000767;gene_name=ENSG00000293305;ID=intron:HG00140_ch_T0000767:1;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8074922	8075162	.	+	.	source_transcript=ENST00000726688.1;source_transcript_name=ENST00000726688;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726688.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726688.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000767;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_T0000767;transcript_name=HG00140_ch_T0000767;gene_name=ENSG00000293305;ID=exon:HG00140_ch_T0000767:2;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	8052914	8075158	1000	+	.	source_transcript=ENST00000726690.1;source_transcript_name=ENST00000726690;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726690.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000768;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_G0000235;transcript_name=HG00140_ch_T0000768;gene_name=ENSG00000293305;ID=HG00140_ch_T0000768;Name=ENSG00000293305
HG00140_chrY	CAT	exon	8052914	8053006	.	+	.	source_transcript=ENST00000726690.1;source_transcript_name=ENST00000726690;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726690.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000768;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_T0000768;transcript_name=HG00140_ch_T0000768;gene_name=ENSG00000293305;ID=exon:HG00140_ch_T0000768:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8053007	8053290	.	+	.	source_transcript=ENST00000726690.1;source_transcript_name=ENST00000726690;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726690.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000768;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_T0000768;transcript_name=HG00140_ch_T0000768;gene_name=ENSG00000293305;ID=intron:HG00140_ch_T0000768:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8053291	8053441	.	+	.	source_transcript=ENST00000726690.1;source_transcript_name=ENST00000726690;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726690.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000768;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_T0000768;transcript_name=HG00140_ch_T0000768;gene_name=ENSG00000293305;ID=exon:HG00140_ch_T0000768:1;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8053442	8067864	.	+	.	source_transcript=ENST00000726690.1;source_transcript_name=ENST00000726690;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726690.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000768;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_T0000768;transcript_name=HG00140_ch_T0000768;gene_name=ENSG00000293305;ID=intron:HG00140_ch_T0000768:1;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8067865	8068049	.	+	.	source_transcript=ENST00000726690.1;source_transcript_name=ENST00000726690;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726690.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000768;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_T0000768;transcript_name=HG00140_ch_T0000768;gene_name=ENSG00000293305;ID=exon:HG00140_ch_T0000768:2;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8068050	8074921	.	+	.	source_transcript=ENST00000726690.1;source_transcript_name=ENST00000726690;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726690.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000768;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_T0000768;transcript_name=HG00140_ch_T0000768;gene_name=ENSG00000293305;ID=intron:HG00140_ch_T0000768:2;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8074922	8075158	.	+	.	source_transcript=ENST00000726690.1;source_transcript_name=ENST00000726690;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726690.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000768;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_T0000768;transcript_name=HG00140_ch_T0000768;gene_name=ENSG00000293305;ID=exon:HG00140_ch_T0000768:3;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	8052968	8075162	1000	+	.	source_transcript=ENST00000726691.1;source_transcript_name=ENST00000726691;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726691.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000769;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_G0000235;transcript_name=HG00140_ch_T0000769;gene_name=ENSG00000293305;ID=HG00140_ch_T0000769;Name=ENSG00000293305
HG00140_chrY	CAT	exon	8052968	8053006	.	+	.	source_transcript=ENST00000726691.1;source_transcript_name=ENST00000726691;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726691.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000769;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_T0000769;transcript_name=HG00140_ch_T0000769;gene_name=ENSG00000293305;ID=exon:HG00140_ch_T0000769:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8053007	8067864	.	+	.	source_transcript=ENST00000726691.1;source_transcript_name=ENST00000726691;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726691.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000769;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_T0000769;transcript_name=HG00140_ch_T0000769;gene_name=ENSG00000293305;ID=intron:HG00140_ch_T0000769:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8067865	8067987	.	+	.	source_transcript=ENST00000726691.1;source_transcript_name=ENST00000726691;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726691.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000769;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_T0000769;transcript_name=HG00140_ch_T0000769;gene_name=ENSG00000293305;ID=exon:HG00140_ch_T0000769:1;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8067988	8074921	.	+	.	source_transcript=ENST00000726691.1;source_transcript_name=ENST00000726691;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726691.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000769;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_T0000769;transcript_name=HG00140_ch_T0000769;gene_name=ENSG00000293305;ID=intron:HG00140_ch_T0000769:1;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8074922	8075162	.	+	.	source_transcript=ENST00000726691.1;source_transcript_name=ENST00000726691;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726691.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726691.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000769;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_T0000769;transcript_name=HG00140_ch_T0000769;gene_name=ENSG00000293305;ID=exon:HG00140_ch_T0000769:2;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	8052970	8075159	1000	+	.	source_transcript=ENST00000726692.1;source_transcript_name=ENST00000726692;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726692.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726692.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000770;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_G0000235;transcript_name=HG00140_ch_T0000770;gene_name=ENSG00000293305;ID=HG00140_ch_T0000770;Name=ENSG00000293305
HG00140_chrY	CAT	exon	8052970	8053006	.	+	.	source_transcript=ENST00000726692.1;source_transcript_name=ENST00000726692;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726692.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726692.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000770;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_T0000770;transcript_name=HG00140_ch_T0000770;gene_name=ENSG00000293305;ID=exon:HG00140_ch_T0000770:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8053007	8067864	.	+	.	source_transcript=ENST00000726692.1;source_transcript_name=ENST00000726692;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726692.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726692.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000770;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_T0000770;transcript_name=HG00140_ch_T0000770;gene_name=ENSG00000293305;ID=intron:HG00140_ch_T0000770:0;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8067865	8068049	.	+	.	source_transcript=ENST00000726692.1;source_transcript_name=ENST00000726692;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726692.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726692.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000770;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_T0000770;transcript_name=HG00140_ch_T0000770;gene_name=ENSG00000293305;ID=exon:HG00140_ch_T0000770:1;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8068050	8074921	.	+	.	source_transcript=ENST00000726692.1;source_transcript_name=ENST00000726692;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726692.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726692.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000770;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_T0000770;transcript_name=HG00140_ch_T0000770;gene_name=ENSG00000293305;ID=intron:HG00140_ch_T0000770:1;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8074922	8075159	.	+	.	source_transcript=ENST00000726692.1;source_transcript_name=ENST00000726692;source_gene=ENSG00000293305.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293305.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726692.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726692.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293305;transcript_id=HG00140_ch_T0000770;gene_id=HG00140_ch_G0000235;Parent=HG00140_ch_T0000770;transcript_name=HG00140_ch_T0000770;gene_name=ENSG00000293305;ID=exon:HG00140_ch_T0000770:2;Name=ENSG00000293305;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	8074316	8076143	.	+	.	source_gene_common_name=ZNF736P9Y;source_gene=ENSG00000239893.4;gene_id=HG00140_ch_G0000236;gene_biotype=transcribed_processed_pseudogene;gene_name=ZNF736P9Y;gene_sources=liftoff;ID=HG00140_ch_G0000236;Name=ZNF736P9Y
HG00140_chrY	CAT	transcript	8074316	8076143	1000	+	.	source_transcript=ENST00000439586.1;source_transcript_name=ZNF736P9Y-201;source_gene=ENSG00000239893.4;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000239893.4;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000439586.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439586.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P9Y;transcript_id=HG00140_ch_T0000771;gene_id=HG00140_ch_G0000236;Parent=HG00140_ch_G0000236;transcript_name=HG00140_ch_T0000771;gene_name=ZNF736P9Y;ID=HG00140_ch_T0000771;Name=ZNF736P9Y
HG00140_chrY	CAT	exon	8074316	8074437	.	+	.	source_transcript=ENST00000439586.1;source_transcript_name=ZNF736P9Y-201;source_gene=ENSG00000239893.4;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000239893.4;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000439586.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439586.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P9Y;transcript_id=HG00140_ch_T0000771;gene_id=HG00140_ch_G0000236;Parent=HG00140_ch_T0000771;transcript_name=HG00140_ch_T0000771;gene_name=ZNF736P9Y;ID=exon:HG00140_ch_T0000771:0;Name=ZNF736P9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8074438	8074920	.	+	.	source_transcript=ENST00000439586.1;source_transcript_name=ZNF736P9Y-201;source_gene=ENSG00000239893.4;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000239893.4;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000439586.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439586.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P9Y;transcript_id=HG00140_ch_T0000771;gene_id=HG00140_ch_G0000236;Parent=HG00140_ch_T0000771;transcript_name=HG00140_ch_T0000771;gene_name=ZNF736P9Y;ID=intron:HG00140_ch_T0000771:0;Name=ZNF736P9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8074921	8076143	.	+	.	source_transcript=ENST00000439586.1;source_transcript_name=ZNF736P9Y-201;source_gene=ENSG00000239893.4;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000239893.4;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000439586.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439586.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P9Y;transcript_id=HG00140_ch_T0000771;gene_id=HG00140_ch_G0000236;Parent=HG00140_ch_T0000771;transcript_name=HG00140_ch_T0000771;gene_name=ZNF736P9Y;ID=exon:HG00140_ch_T0000771:1;Name=ZNF736P9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	8153231	8154050	.	+	.	source_gene_common_name=ZNF736P7Y;source_gene=ENSG00000241200.1;alternative_source_transcripts=ENST00000425158.1,ENST00000425158.1;gene_id=HG00140_ch_G0000237;gene_biotype=processed_pseudogene;gene_name=ZNF736P7Y;gene_sources=liftoff;ID=HG00140_ch_G0000237;Name=ZNF736P7Y
HG00140_chrY	CAT	transcript	8153231	8154050	1000	+	.	source_transcript=ENST00000425158.1;source_transcript_name=ZNF736P7Y-201;source_gene=ENSG00000241200.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000241200.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425158.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P7Y;alternative_source_transcripts=ENST00000425158.1,ENST00000425158.1;transcript_id=HG00140_ch_T0000772;gene_id=HG00140_ch_G0000237;Parent=HG00140_ch_G0000237;transcript_name=HG00140_ch_T0000772;gene_name=ZNF736P7Y;ID=HG00140_ch_T0000772;Name=ZNF736P7Y
HG00140_chrY	CAT	exon	8153231	8154050	.	+	.	source_transcript=ENST00000425158.1;source_transcript_name=ZNF736P7Y-201;source_gene=ENSG00000241200.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000241200.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P7Y;alternative_source_transcripts=ENST00000425158.1,ENST00000425158.1;transcript_id=HG00140_ch_T0000772;gene_id=HG00140_ch_G0000237;Parent=HG00140_ch_T0000772;transcript_name=HG00140_ch_T0000772;gene_name=ZNF736P7Y;ID=exon:HG00140_ch_T0000772:0;Name=ZNF736P7Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	8207397	8212040	.	+	.	source_gene_common_name=BPY2DP;source_gene=ENSG00000229745.1;alternative_source_transcripts=ENST00000422208.1,ENST00000422208.1;gene_id=HG00140_ch_G0000238;gene_biotype=unprocessed_pseudogene;gene_name=BPY2DP;gene_sources=liftoff;ID=HG00140_ch_G0000238;Name=BPY2DP
HG00140_chrY	CAT	transcript	8207397	8212040	1000	+	.	source_transcript=ENST00000422208.1;source_transcript_name=BPY2DP-201;source_gene=ENSG00000229745.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229745.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422208.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2DP;alternative_source_transcripts=ENST00000422208.1,ENST00000422208.1;transcript_id=HG00140_ch_T0000773;gene_id=HG00140_ch_G0000238;Parent=HG00140_ch_G0000238;transcript_name=HG00140_ch_T0000773;gene_name=BPY2DP;ID=HG00140_ch_T0000773;Name=BPY2DP
HG00140_chrY	CAT	exon	8207397	8207466	.	+	.	source_transcript=ENST00000422208.1;source_transcript_name=BPY2DP-201;source_gene=ENSG00000229745.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229745.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2DP;alternative_source_transcripts=ENST00000422208.1,ENST00000422208.1;transcript_id=HG00140_ch_T0000773;gene_id=HG00140_ch_G0000238;Parent=HG00140_ch_T0000773;transcript_name=HG00140_ch_T0000773;gene_name=BPY2DP;ID=exon:HG00140_ch_T0000773:0;Name=BPY2DP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8207467	8208332	.	+	.	source_transcript=ENST00000422208.1;source_transcript_name=BPY2DP-201;source_gene=ENSG00000229745.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229745.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2DP;alternative_source_transcripts=ENST00000422208.1,ENST00000422208.1;transcript_id=HG00140_ch_T0000773;gene_id=HG00140_ch_G0000238;Parent=HG00140_ch_T0000773;transcript_name=HG00140_ch_T0000773;gene_name=BPY2DP;ID=intron:HG00140_ch_T0000773:0;Name=BPY2DP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8208333	8208402	.	+	.	source_transcript=ENST00000422208.1;source_transcript_name=BPY2DP-201;source_gene=ENSG00000229745.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229745.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2DP;alternative_source_transcripts=ENST00000422208.1,ENST00000422208.1;transcript_id=HG00140_ch_T0000773;gene_id=HG00140_ch_G0000238;Parent=HG00140_ch_T0000773;transcript_name=HG00140_ch_T0000773;gene_name=BPY2DP;ID=exon:HG00140_ch_T0000773:1;Name=BPY2DP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8208403	8211237	.	+	.	source_transcript=ENST00000422208.1;source_transcript_name=BPY2DP-201;source_gene=ENSG00000229745.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229745.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2DP;alternative_source_transcripts=ENST00000422208.1,ENST00000422208.1;transcript_id=HG00140_ch_T0000773;gene_id=HG00140_ch_G0000238;Parent=HG00140_ch_T0000773;transcript_name=HG00140_ch_T0000773;gene_name=BPY2DP;ID=intron:HG00140_ch_T0000773:1;Name=BPY2DP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8211238	8211343	.	+	.	source_transcript=ENST00000422208.1;source_transcript_name=BPY2DP-201;source_gene=ENSG00000229745.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229745.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2DP;alternative_source_transcripts=ENST00000422208.1,ENST00000422208.1;transcript_id=HG00140_ch_T0000773;gene_id=HG00140_ch_G0000238;Parent=HG00140_ch_T0000773;transcript_name=HG00140_ch_T0000773;gene_name=BPY2DP;ID=exon:HG00140_ch_T0000773:2;Name=BPY2DP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8211344	8212021	.	+	.	source_transcript=ENST00000422208.1;source_transcript_name=BPY2DP-201;source_gene=ENSG00000229745.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229745.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2DP;alternative_source_transcripts=ENST00000422208.1,ENST00000422208.1;transcript_id=HG00140_ch_T0000773;gene_id=HG00140_ch_G0000238;Parent=HG00140_ch_T0000773;transcript_name=HG00140_ch_T0000773;gene_name=BPY2DP;ID=intron:HG00140_ch_T0000773:2;Name=BPY2DP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8212022	8212040	.	+	.	source_transcript=ENST00000422208.1;source_transcript_name=BPY2DP-201;source_gene=ENSG00000229745.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229745.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422208.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422208.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2DP;alternative_source_transcripts=ENST00000422208.1,ENST00000422208.1;transcript_id=HG00140_ch_T0000773;gene_id=HG00140_ch_G0000238;Parent=HG00140_ch_T0000773;transcript_name=HG00140_ch_T0000773;gene_name=BPY2DP;ID=exon:HG00140_ch_T0000773:3;Name=BPY2DP;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	8230947	8231615	.	+	.	source_gene_common_name=ZNF736P8Y;source_gene=ENSG00000244246.1;alternative_source_transcripts=ENST00000451913.1,ENST00000451913.1;gene_id=HG00140_ch_G0000239;gene_biotype=processed_pseudogene;gene_name=ZNF736P8Y;gene_sources=liftoff;ID=HG00140_ch_G0000239;Name=ZNF736P8Y
HG00140_chrY	CAT	transcript	8230947	8231615	1000	+	.	source_transcript=ENST00000451913.1;source_transcript_name=ZNF736P8Y-201;source_gene=ENSG00000244246.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000244246.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000451913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451913.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P8Y;alternative_source_transcripts=ENST00000451913.1,ENST00000451913.1;transcript_id=HG00140_ch_T0000774;gene_id=HG00140_ch_G0000239;Parent=HG00140_ch_G0000239;transcript_name=HG00140_ch_T0000774;gene_name=ZNF736P8Y;ID=HG00140_ch_T0000774;Name=ZNF736P8Y
HG00140_chrY	CAT	exon	8230947	8231615	.	+	.	source_transcript=ENST00000451913.1;source_transcript_name=ZNF736P8Y-201;source_gene=ENSG00000244246.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000244246.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000451913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P8Y;alternative_source_transcripts=ENST00000451913.1,ENST00000451913.1;transcript_id=HG00140_ch_T0000774;gene_id=HG00140_ch_G0000239;Parent=HG00140_ch_T0000774;transcript_name=HG00140_ch_T0000774;gene_name=ZNF736P8Y;ID=exon:HG00140_ch_T0000774:0;Name=ZNF736P8Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	8237734	8239501	.	+	.	source_gene_common_name=ENSG00000273863;source_gene=ENSG00000273863.1;alternative_source_transcripts=ENST00000614118.1,ENST00000614118.1;gene_id=HG00140_ch_G0000240;gene_biotype=processed_pseudogene;gene_name=ENSG00000273863;gene_sources=liftoff;ID=HG00140_ch_G0000240;Name=ENSG00000273863
HG00140_chrY	CAT	transcript	8237734	8239501	1000	+	.	source_transcript=ENST00000614118.1;source_transcript_name=ENST00000614118;source_gene=ENSG00000273863.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000273863.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000614118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614118.1;transcript_score=299.86;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273863;alternative_source_transcripts=ENST00000614118.1,ENST00000614118.1;transcript_id=HG00140_ch_T0000775;gene_id=HG00140_ch_G0000240;Parent=HG00140_ch_G0000240;transcript_name=HG00140_ch_T0000775;gene_name=ENSG00000273863;ID=HG00140_ch_T0000775;Name=ENSG00000273863
HG00140_chrY	CAT	exon	8237734	8237923	.	+	.	source_transcript=ENST00000614118.1;source_transcript_name=ENST00000614118;source_gene=ENSG00000273863.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000273863.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000614118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614118.1;transcript_score=299.86;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273863;alternative_source_transcripts=ENST00000614118.1,ENST00000614118.1;transcript_id=HG00140_ch_T0000775;gene_id=HG00140_ch_G0000240;Parent=HG00140_ch_T0000775;transcript_name=HG00140_ch_T0000775;gene_name=ENSG00000273863;ID=exon:HG00140_ch_T0000775:0;Name=ENSG00000273863;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8237924	8238978	.	+	.	source_transcript=ENST00000614118.1;source_transcript_name=ENST00000614118;source_gene=ENSG00000273863.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000273863.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000614118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614118.1;transcript_score=299.86;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273863;alternative_source_transcripts=ENST00000614118.1,ENST00000614118.1;transcript_id=HG00140_ch_T0000775;gene_id=HG00140_ch_G0000240;Parent=HG00140_ch_T0000775;transcript_name=HG00140_ch_T0000775;gene_name=ENSG00000273863;ID=intron:HG00140_ch_T0000775:0;Name=ENSG00000273863;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8238979	8239501	.	+	.	source_transcript=ENST00000614118.1;source_transcript_name=ENST00000614118;source_gene=ENSG00000273863.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000273863.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000614118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614118.1;transcript_score=299.86;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273863;alternative_source_transcripts=ENST00000614118.1,ENST00000614118.1;transcript_id=HG00140_ch_T0000775;gene_id=HG00140_ch_G0000240;Parent=HG00140_ch_T0000775;transcript_name=HG00140_ch_T0000775;gene_name=ENSG00000273863;ID=exon:HG00140_ch_T0000775:1;Name=ENSG00000273863;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	8290164	8291354	.	+	.	source_gene_common_name=ZNF92P1Y;source_gene=ENSG00000215603.4;alternative_source_transcripts=ENST00000415010.1,ENST00000415010.1;gene_id=HG00140_ch_G0000241;gene_biotype=processed_pseudogene;gene_name=ZNF92P1Y;gene_sources=liftoff;ID=HG00140_ch_G0000241;Name=ZNF92P1Y
HG00140_chrY	CAT	transcript	8290164	8291354	1000	+	.	source_transcript=ENST00000415010.1;source_transcript_name=ZNF92P1Y-201;source_gene=ENSG00000215603.4;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000215603.4;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000415010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415010.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF92P1Y;alternative_source_transcripts=ENST00000415010.1,ENST00000415010.1;transcript_id=HG00140_ch_T0000776;gene_id=HG00140_ch_G0000241;Parent=HG00140_ch_G0000241;transcript_name=HG00140_ch_T0000776;gene_name=ZNF92P1Y;ID=HG00140_ch_T0000776;Name=ZNF92P1Y
HG00140_chrY	CAT	exon	8290164	8291354	.	+	.	source_transcript=ENST00000415010.1;source_transcript_name=ZNF92P1Y-201;source_gene=ENSG00000215603.4;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000215603.4;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000415010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415010.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF92P1Y;alternative_source_transcripts=ENST00000415010.1,ENST00000415010.1;transcript_id=HG00140_ch_T0000776;gene_id=HG00140_ch_G0000241;Parent=HG00140_ch_T0000776;transcript_name=HG00140_ch_T0000776;gene_name=ZNF92P1Y;ID=exon:HG00140_ch_T0000776:0;Name=ZNF92P1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	8298618	8299587	.	+	.	source_gene_common_name=ENSG00000278854;source_gene=ENSG00000278854.1;alternative_source_transcripts=ENST00000621243.1,ENST00000621243.1;gene_id=HG00140_ch_G0000242;gene_biotype=processed_pseudogene;gene_name=ENSG00000278854;gene_sources=liftoff;ID=HG00140_ch_G0000242;Name=ENSG00000278854
HG00140_chrY	CAT	transcript	8298618	8299587	1000	+	.	source_transcript=ENST00000621243.1;source_transcript_name=ENST00000621243;source_gene=ENSG00000278854.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000278854.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000621243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621243.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278854;alternative_source_transcripts=ENST00000621243.1,ENST00000621243.1;transcript_id=HG00140_ch_T0000777;gene_id=HG00140_ch_G0000242;Parent=HG00140_ch_G0000242;transcript_name=HG00140_ch_T0000777;gene_name=ENSG00000278854;ID=HG00140_ch_T0000777;Name=ENSG00000278854
HG00140_chrY	CAT	exon	8298618	8298891	.	+	.	source_transcript=ENST00000621243.1;source_transcript_name=ENST00000621243;source_gene=ENSG00000278854.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000278854.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000621243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621243.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278854;alternative_source_transcripts=ENST00000621243.1,ENST00000621243.1;transcript_id=HG00140_ch_T0000777;gene_id=HG00140_ch_G0000242;Parent=HG00140_ch_T0000777;transcript_name=HG00140_ch_T0000777;gene_name=ENSG00000278854;ID=exon:HG00140_ch_T0000777:0;Name=ENSG00000278854;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8298892	8299190	.	+	.	source_transcript=ENST00000621243.1;source_transcript_name=ENST00000621243;source_gene=ENSG00000278854.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000278854.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000621243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621243.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278854;alternative_source_transcripts=ENST00000621243.1,ENST00000621243.1;transcript_id=HG00140_ch_T0000777;gene_id=HG00140_ch_G0000242;Parent=HG00140_ch_T0000777;transcript_name=HG00140_ch_T0000777;gene_name=ENSG00000278854;ID=intron:HG00140_ch_T0000777:0;Name=ENSG00000278854;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8299191	8299587	.	+	.	source_transcript=ENST00000621243.1;source_transcript_name=ENST00000621243;source_gene=ENSG00000278854.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000278854.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000621243.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000621243.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278854;alternative_source_transcripts=ENST00000621243.1,ENST00000621243.1;transcript_id=HG00140_ch_T0000777;gene_id=HG00140_ch_G0000242;Parent=HG00140_ch_T0000777;transcript_name=HG00140_ch_T0000777;gene_name=ENSG00000278854;ID=exon:HG00140_ch_T0000777:1;Name=ENSG00000278854;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	8330388	8341076	.	-	.	source_gene_common_name=TTTY12;source_gene=ENSG00000237048.5;alternative_source_transcripts=ENST00000755458.1,ENST00000755458.1;gene_id=HG00140_ch_G0000243;gene_biotype=lncRNA;gene_name=TTTY12;gene_sources=liftoff;ID=HG00140_ch_G0000243;Name=TTTY12
HG00140_chrY	CAT	transcript	8330388	8341071	1000	-	.	source_transcript=ENST00000755458.1;source_transcript_name=TTTY12-205;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755458.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755458.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000755458.1,ENST00000755458.1;transcript_id=HG00140_ch_T0000778;gene_id=HG00140_ch_G0000243;Parent=HG00140_ch_G0000243;transcript_name=HG00140_ch_T0000778;gene_name=TTTY12;ID=HG00140_ch_T0000778;Name=TTTY12
HG00140_chrY	CAT	exon	8330388	8330493	.	-	.	source_transcript=ENST00000755458.1;source_transcript_name=TTTY12-205;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755458.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755458.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000755458.1,ENST00000755458.1;transcript_id=HG00140_ch_T0000778;gene_id=HG00140_ch_G0000243;Parent=HG00140_ch_T0000778;transcript_name=HG00140_ch_T0000778;gene_name=TTTY12;ID=exon:HG00140_ch_T0000778:0;Name=TTTY12;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8330494	8339992	.	-	.	source_transcript=ENST00000755458.1;source_transcript_name=TTTY12-205;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755458.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755458.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000755458.1,ENST00000755458.1;transcript_id=HG00140_ch_T0000778;gene_id=HG00140_ch_G0000243;Parent=HG00140_ch_T0000778;transcript_name=HG00140_ch_T0000778;gene_name=TTTY12;ID=intron:HG00140_ch_T0000778:0;Name=TTTY12;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8339993	8340148	.	-	.	source_transcript=ENST00000755458.1;source_transcript_name=TTTY12-205;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755458.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755458.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000755458.1,ENST00000755458.1;transcript_id=HG00140_ch_T0000778;gene_id=HG00140_ch_G0000243;Parent=HG00140_ch_T0000778;transcript_name=HG00140_ch_T0000778;gene_name=TTTY12;ID=exon:HG00140_ch_T0000778:1;Name=TTTY12;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8340149	8341009	.	-	.	source_transcript=ENST00000755458.1;source_transcript_name=TTTY12-205;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755458.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755458.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000755458.1,ENST00000755458.1;transcript_id=HG00140_ch_T0000778;gene_id=HG00140_ch_G0000243;Parent=HG00140_ch_T0000778;transcript_name=HG00140_ch_T0000778;gene_name=TTTY12;ID=intron:HG00140_ch_T0000778:1;Name=TTTY12;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8341010	8341071	.	-	.	source_transcript=ENST00000755458.1;source_transcript_name=TTTY12-205;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755458.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755458.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000755458.1,ENST00000755458.1;transcript_id=HG00140_ch_T0000778;gene_id=HG00140_ch_G0000243;Parent=HG00140_ch_T0000778;transcript_name=HG00140_ch_T0000778;gene_name=TTTY12;ID=exon:HG00140_ch_T0000778:2;Name=TTTY12;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	8334389	8341076	1000	-	.	source_transcript=ENST00000413466.3;source_transcript_name=TTTY12-201;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413466.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000413466.3;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000413466.3,ENST00000413466.3;transcript_id=HG00140_ch_T0000779;gene_id=HG00140_ch_G0000243;Parent=HG00140_ch_G0000243;transcript_name=HG00140_ch_T0000779;gene_name=TTTY12;ID=HG00140_ch_T0000779;Name=TTTY12
HG00140_chrY	CAT	exon	8334389	8335211	.	-	.	source_transcript=ENST00000413466.3;source_transcript_name=TTTY12-201;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413466.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000413466.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000413466.3,ENST00000413466.3;transcript_id=HG00140_ch_T0000779;gene_id=HG00140_ch_G0000243;Parent=HG00140_ch_T0000779;transcript_name=HG00140_ch_T0000779;gene_name=TTTY12;ID=exon:HG00140_ch_T0000779:0;Name=TTTY12;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8335212	8339992	.	-	.	source_transcript=ENST00000413466.3;source_transcript_name=TTTY12-201;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413466.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000413466.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000413466.3,ENST00000413466.3;transcript_id=HG00140_ch_T0000779;gene_id=HG00140_ch_G0000243;Parent=HG00140_ch_T0000779;transcript_name=HG00140_ch_T0000779;gene_name=TTTY12;ID=intron:HG00140_ch_T0000779:0;Name=TTTY12;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8339993	8340148	.	-	.	source_transcript=ENST00000413466.3;source_transcript_name=TTTY12-201;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413466.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000413466.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000413466.3,ENST00000413466.3;transcript_id=HG00140_ch_T0000779;gene_id=HG00140_ch_G0000243;Parent=HG00140_ch_T0000779;transcript_name=HG00140_ch_T0000779;gene_name=TTTY12;ID=exon:HG00140_ch_T0000779:1;Name=TTTY12;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8340149	8341009	.	-	.	source_transcript=ENST00000413466.3;source_transcript_name=TTTY12-201;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413466.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000413466.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000413466.3,ENST00000413466.3;transcript_id=HG00140_ch_T0000779;gene_id=HG00140_ch_G0000243;Parent=HG00140_ch_T0000779;transcript_name=HG00140_ch_T0000779;gene_name=TTTY12;ID=intron:HG00140_ch_T0000779:1;Name=TTTY12;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8341010	8341076	.	-	.	source_transcript=ENST00000413466.3;source_transcript_name=TTTY12-201;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000413466.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000413466.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000413466.3,ENST00000413466.3;transcript_id=HG00140_ch_T0000779;gene_id=HG00140_ch_G0000243;Parent=HG00140_ch_T0000779;transcript_name=HG00140_ch_T0000779;gene_name=TTTY12;ID=exon:HG00140_ch_T0000779:2;Name=TTTY12;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	8334389	8341071	1000	-	.	source_transcript=ENST00000651670.1;source_transcript_name=TTTY12-202;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651670.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000651670.1,ENST00000651670.1;transcript_id=HG00140_ch_T0000780;gene_id=HG00140_ch_G0000243;Parent=HG00140_ch_G0000243;transcript_name=HG00140_ch_T0000780;gene_name=TTTY12;ID=HG00140_ch_T0000780;Name=TTTY12
HG00140_chrY	CAT	exon	8334389	8335211	.	-	.	source_transcript=ENST00000651670.1;source_transcript_name=TTTY12-202;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000651670.1,ENST00000651670.1;transcript_id=HG00140_ch_T0000780;gene_id=HG00140_ch_G0000243;Parent=HG00140_ch_T0000780;transcript_name=HG00140_ch_T0000780;gene_name=TTTY12;ID=exon:HG00140_ch_T0000780:0;Name=TTTY12;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8335212	8339446	.	-	.	source_transcript=ENST00000651670.1;source_transcript_name=TTTY12-202;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000651670.1,ENST00000651670.1;transcript_id=HG00140_ch_T0000780;gene_id=HG00140_ch_G0000243;Parent=HG00140_ch_T0000780;transcript_name=HG00140_ch_T0000780;gene_name=TTTY12;ID=intron:HG00140_ch_T0000780:0;Name=TTTY12;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8339447	8339528	.	-	.	source_transcript=ENST00000651670.1;source_transcript_name=TTTY12-202;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000651670.1,ENST00000651670.1;transcript_id=HG00140_ch_T0000780;gene_id=HG00140_ch_G0000243;Parent=HG00140_ch_T0000780;transcript_name=HG00140_ch_T0000780;gene_name=TTTY12;ID=exon:HG00140_ch_T0000780:1;Name=TTTY12;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8339529	8339992	.	-	.	source_transcript=ENST00000651670.1;source_transcript_name=TTTY12-202;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000651670.1,ENST00000651670.1;transcript_id=HG00140_ch_T0000780;gene_id=HG00140_ch_G0000243;Parent=HG00140_ch_T0000780;transcript_name=HG00140_ch_T0000780;gene_name=TTTY12;ID=intron:HG00140_ch_T0000780:1;Name=TTTY12;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8339993	8340148	.	-	.	source_transcript=ENST00000651670.1;source_transcript_name=TTTY12-202;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000651670.1,ENST00000651670.1;transcript_id=HG00140_ch_T0000780;gene_id=HG00140_ch_G0000243;Parent=HG00140_ch_T0000780;transcript_name=HG00140_ch_T0000780;gene_name=TTTY12;ID=exon:HG00140_ch_T0000780:2;Name=TTTY12;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8340149	8341009	.	-	.	source_transcript=ENST00000651670.1;source_transcript_name=TTTY12-202;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000651670.1,ENST00000651670.1;transcript_id=HG00140_ch_T0000780;gene_id=HG00140_ch_G0000243;Parent=HG00140_ch_T0000780;transcript_name=HG00140_ch_T0000780;gene_name=TTTY12;ID=intron:HG00140_ch_T0000780:2;Name=TTTY12;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8341010	8341071	.	-	.	source_transcript=ENST00000651670.1;source_transcript_name=TTTY12-202;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000651670.1,ENST00000651670.1;transcript_id=HG00140_ch_T0000780;gene_id=HG00140_ch_G0000243;Parent=HG00140_ch_T0000780;transcript_name=HG00140_ch_T0000780;gene_name=TTTY12;ID=exon:HG00140_ch_T0000780:3;Name=TTTY12;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	8334389	8340150	1000	-	.	source_transcript=ENST00000653671.1;source_transcript_name=TTTY12-203;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653671.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000653671.1,ENST00000653671.1;transcript_id=HG00140_ch_T0000781;gene_id=HG00140_ch_G0000243;Parent=HG00140_ch_G0000243;transcript_name=HG00140_ch_T0000781;gene_name=TTTY12;ID=HG00140_ch_T0000781;Name=TTTY12
HG00140_chrY	CAT	exon	8334389	8334540	.	-	.	source_transcript=ENST00000653671.1;source_transcript_name=TTTY12-203;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653671.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000653671.1,ENST00000653671.1;transcript_id=HG00140_ch_T0000781;gene_id=HG00140_ch_G0000243;Parent=HG00140_ch_T0000781;transcript_name=HG00140_ch_T0000781;gene_name=TTTY12;ID=exon:HG00140_ch_T0000781:0;Name=TTTY12;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8334541	8339446	.	-	.	source_transcript=ENST00000653671.1;source_transcript_name=TTTY12-203;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653671.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000653671.1,ENST00000653671.1;transcript_id=HG00140_ch_T0000781;gene_id=HG00140_ch_G0000243;Parent=HG00140_ch_T0000781;transcript_name=HG00140_ch_T0000781;gene_name=TTTY12;ID=intron:HG00140_ch_T0000781:0;Name=TTTY12;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8339447	8339528	.	-	.	source_transcript=ENST00000653671.1;source_transcript_name=TTTY12-203;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653671.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000653671.1,ENST00000653671.1;transcript_id=HG00140_ch_T0000781;gene_id=HG00140_ch_G0000243;Parent=HG00140_ch_T0000781;transcript_name=HG00140_ch_T0000781;gene_name=TTTY12;ID=exon:HG00140_ch_T0000781:1;Name=TTTY12;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8339529	8339992	.	-	.	source_transcript=ENST00000653671.1;source_transcript_name=TTTY12-203;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653671.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000653671.1,ENST00000653671.1;transcript_id=HG00140_ch_T0000781;gene_id=HG00140_ch_G0000243;Parent=HG00140_ch_T0000781;transcript_name=HG00140_ch_T0000781;gene_name=TTTY12;ID=intron:HG00140_ch_T0000781:1;Name=TTTY12;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8339993	8340150	.	-	.	source_transcript=ENST00000653671.1;source_transcript_name=TTTY12-203;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653671.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000653671.1,ENST00000653671.1;transcript_id=HG00140_ch_T0000781;gene_id=HG00140_ch_G0000243;Parent=HG00140_ch_T0000781;transcript_name=HG00140_ch_T0000781;gene_name=TTTY12;ID=exon:HG00140_ch_T0000781:2;Name=TTTY12;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	8334389	8337259	1000	-	.	source_transcript=ENST00000664089.1;source_transcript_name=TTTY12-204;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000664089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000664089.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000664089.1,ENST00000664089.1;transcript_id=HG00140_ch_T0000782;gene_id=HG00140_ch_G0000243;Parent=HG00140_ch_G0000243;transcript_name=HG00140_ch_T0000782;gene_name=TTTY12;ID=HG00140_ch_T0000782;Name=TTTY12
HG00140_chrY	CAT	exon	8334389	8335211	.	-	.	source_transcript=ENST00000664089.1;source_transcript_name=TTTY12-204;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000664089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000664089.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000664089.1,ENST00000664089.1;transcript_id=HG00140_ch_T0000782;gene_id=HG00140_ch_G0000243;Parent=HG00140_ch_T0000782;transcript_name=HG00140_ch_T0000782;gene_name=TTTY12;ID=exon:HG00140_ch_T0000782:0;Name=TTTY12;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8335212	8337216	.	-	.	source_transcript=ENST00000664089.1;source_transcript_name=TTTY12-204;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000664089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000664089.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000664089.1,ENST00000664089.1;transcript_id=HG00140_ch_T0000782;gene_id=HG00140_ch_G0000243;Parent=HG00140_ch_T0000782;transcript_name=HG00140_ch_T0000782;gene_name=TTTY12;ID=intron:HG00140_ch_T0000782:0;Name=TTTY12;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8337217	8337259	.	-	.	source_transcript=ENST00000664089.1;source_transcript_name=TTTY12-204;source_gene=ENSG00000237048.5;source_gene_biotype=lncRNA;original_gene_id=ENSG00000237048.5;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000664089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000664089.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=ENST00000664089.1,ENST00000664089.1;transcript_id=HG00140_ch_T0000782;gene_id=HG00140_ch_G0000243;Parent=HG00140_ch_T0000782;transcript_name=HG00140_ch_T0000782;gene_name=TTTY12;ID=exon:HG00140_ch_T0000782:1;Name=TTTY12;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	8334767	8453666	.	+	.	source_gene_common_name=TTTY16;source_gene=ENSG00000290323.2;gene_id=HG00140_ch_G0000244;gene_biotype=lncRNA;gene_name=TTTY16;gene_sources=liftoff;ID=HG00140_ch_G0000244;Name=TTTY16
HG00140_chrY	CAT	transcript	8334767	8402455	1000	+	.	source_transcript=ENST00000652723.1;source_transcript_name=TTTY16-203;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652723.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000783;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_G0000244;transcript_name=HG00140_ch_T0000783;gene_name=TTTY16;ID=HG00140_ch_T0000783;Name=TTTY16
HG00140_chrY	CAT	exon	8334767	8335593	.	+	.	source_transcript=ENST00000652723.1;source_transcript_name=TTTY16-203;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000783;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000783;transcript_name=HG00140_ch_T0000783;gene_name=TTTY16;ID=exon:HG00140_ch_T0000783:0;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8335594	8335829	.	+	.	source_transcript=ENST00000652723.1;source_transcript_name=TTTY16-203;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000783;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000783;transcript_name=HG00140_ch_T0000783;gene_name=TTTY16;ID=intron:HG00140_ch_T0000783:0;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8335830	8335918	.	+	.	source_transcript=ENST00000652723.1;source_transcript_name=TTTY16-203;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000783;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000783;transcript_name=HG00140_ch_T0000783;gene_name=TTTY16;ID=exon:HG00140_ch_T0000783:1;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8335919	8339467	.	+	.	source_transcript=ENST00000652723.1;source_transcript_name=TTTY16-203;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000783;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000783;transcript_name=HG00140_ch_T0000783;gene_name=TTTY16;ID=intron:HG00140_ch_T0000783:1;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8339468	8339577	.	+	.	source_transcript=ENST00000652723.1;source_transcript_name=TTTY16-203;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000783;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000783;transcript_name=HG00140_ch_T0000783;gene_name=TTTY16;ID=exon:HG00140_ch_T0000783:2;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8339578	8368368	.	+	.	source_transcript=ENST00000652723.1;source_transcript_name=TTTY16-203;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000783;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000783;transcript_name=HG00140_ch_T0000783;gene_name=TTTY16;ID=intron:HG00140_ch_T0000783:2;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8368369	8368552	.	+	.	source_transcript=ENST00000652723.1;source_transcript_name=TTTY16-203;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000783;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000783;transcript_name=HG00140_ch_T0000783;gene_name=TTTY16;ID=exon:HG00140_ch_T0000783:3;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8368553	8402026	.	+	.	source_transcript=ENST00000652723.1;source_transcript_name=TTTY16-203;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000783;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000783;transcript_name=HG00140_ch_T0000783;gene_name=TTTY16;ID=intron:HG00140_ch_T0000783:3;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8402027	8402455	.	+	.	source_transcript=ENST00000652723.1;source_transcript_name=TTTY16-203;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000783;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000783;transcript_name=HG00140_ch_T0000783;gene_name=TTTY16;ID=exon:HG00140_ch_T0000783:4;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	8335805	8453666	1000	+	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000784;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_G0000244;transcript_name=HG00140_ch_T0000784;gene_name=TTTY16;ID=HG00140_ch_T0000784;Name=TTTY16
HG00140_chrY	CAT	exon	8335805	8335918	.	+	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000784;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000784;transcript_name=HG00140_ch_T0000784;gene_name=TTTY16;ID=exon:HG00140_ch_T0000784:0;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8335919	8368368	.	+	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000784;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000784;transcript_name=HG00140_ch_T0000784;gene_name=TTTY16;ID=intron:HG00140_ch_T0000784:0;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8368369	8368552	.	+	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000784;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000784;transcript_name=HG00140_ch_T0000784;gene_name=TTTY16;ID=exon:HG00140_ch_T0000784:1;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8368553	8435277	.	+	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000784;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000784;transcript_name=HG00140_ch_T0000784;gene_name=TTTY16;ID=intron:HG00140_ch_T0000784:1;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8435278	8435506	.	+	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000784;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000784;transcript_name=HG00140_ch_T0000784;gene_name=TTTY16;ID=exon:HG00140_ch_T0000784:2;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8435507	8437055	.	+	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000784;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000784;transcript_name=HG00140_ch_T0000784;gene_name=TTTY16;ID=intron:HG00140_ch_T0000784:2;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8437056	8437204	.	+	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000784;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000784;transcript_name=HG00140_ch_T0000784;gene_name=TTTY16;ID=exon:HG00140_ch_T0000784:3;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8437205	8447111	.	+	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000784;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000784;transcript_name=HG00140_ch_T0000784;gene_name=TTTY16;ID=intron:HG00140_ch_T0000784:3;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8447112	8447188	.	+	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000784;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000784;transcript_name=HG00140_ch_T0000784;gene_name=TTTY16;ID=exon:HG00140_ch_T0000784:4;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8447189	8448888	.	+	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000784;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000784;transcript_name=HG00140_ch_T0000784;gene_name=TTTY16;ID=intron:HG00140_ch_T0000784:4;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8448889	8449189	.	+	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000784;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000784;transcript_name=HG00140_ch_T0000784;gene_name=TTTY16;ID=exon:HG00140_ch_T0000784:5;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8449190	8451098	.	+	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000784;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000784;transcript_name=HG00140_ch_T0000784;gene_name=TTTY16;ID=intron:HG00140_ch_T0000784:5;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8451099	8451293	.	+	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000784;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000784;transcript_name=HG00140_ch_T0000784;gene_name=TTTY16;ID=exon:HG00140_ch_T0000784:6;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8451294	8453255	.	+	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000784;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000784;transcript_name=HG00140_ch_T0000784;gene_name=TTTY16;ID=intron:HG00140_ch_T0000784:6;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8453256	8453666	.	+	.	source_transcript=ENST00000651261.1;source_transcript_name=TTTY16-202;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651261.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000784;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000784;transcript_name=HG00140_ch_T0000784;gene_name=TTTY16;ID=exon:HG00140_ch_T0000784:7;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	8335811	8402459	1000	+	.	source_transcript=ENST00000442584.2;source_transcript_name=TTTY16-201;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442584.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442584.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000785;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_G0000244;transcript_name=HG00140_ch_T0000785;gene_name=TTTY16;ID=HG00140_ch_T0000785;Name=TTTY16
HG00140_chrY	CAT	exon	8335811	8335918	.	+	.	source_transcript=ENST00000442584.2;source_transcript_name=TTTY16-201;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442584.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442584.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000785;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000785;transcript_name=HG00140_ch_T0000785;gene_name=TTTY16;ID=exon:HG00140_ch_T0000785:0;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8335919	8339467	.	+	.	source_transcript=ENST00000442584.2;source_transcript_name=TTTY16-201;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442584.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442584.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000785;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000785;transcript_name=HG00140_ch_T0000785;gene_name=TTTY16;ID=intron:HG00140_ch_T0000785:0;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8339468	8339577	.	+	.	source_transcript=ENST00000442584.2;source_transcript_name=TTTY16-201;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442584.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442584.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000785;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000785;transcript_name=HG00140_ch_T0000785;gene_name=TTTY16;ID=exon:HG00140_ch_T0000785:1;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8339578	8368044	.	+	.	source_transcript=ENST00000442584.2;source_transcript_name=TTTY16-201;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442584.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442584.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000785;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000785;transcript_name=HG00140_ch_T0000785;gene_name=TTTY16;ID=intron:HG00140_ch_T0000785:1;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8368045	8368239	.	+	.	source_transcript=ENST00000442584.2;source_transcript_name=TTTY16-201;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442584.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442584.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000785;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000785;transcript_name=HG00140_ch_T0000785;gene_name=TTTY16;ID=exon:HG00140_ch_T0000785:2;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8368240	8368365	.	+	.	source_transcript=ENST00000442584.2;source_transcript_name=TTTY16-201;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442584.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442584.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000785;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000785;transcript_name=HG00140_ch_T0000785;gene_name=TTTY16;ID=intron:HG00140_ch_T0000785:2;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8368366	8368552	.	+	.	source_transcript=ENST00000442584.2;source_transcript_name=TTTY16-201;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442584.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442584.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000785;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000785;transcript_name=HG00140_ch_T0000785;gene_name=TTTY16;ID=exon:HG00140_ch_T0000785:3;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8368553	8402026	.	+	.	source_transcript=ENST00000442584.2;source_transcript_name=TTTY16-201;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442584.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442584.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000785;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000785;transcript_name=HG00140_ch_T0000785;gene_name=TTTY16;ID=intron:HG00140_ch_T0000785:3;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8402027	8402459	.	+	.	source_transcript=ENST00000442584.2;source_transcript_name=TTTY16-201;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000442584.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442584.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000785;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000785;transcript_name=HG00140_ch_T0000785;gene_name=TTTY16;ID=exon:HG00140_ch_T0000785:4;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	8335871	8402467	1000	+	.	source_transcript=ENST00000755367.1;source_transcript_name=TTTY16-206;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755367.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000786;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_G0000244;transcript_name=HG00140_ch_T0000786;gene_name=TTTY16;ID=HG00140_ch_T0000786;Name=TTTY16
HG00140_chrY	CAT	exon	8335871	8335918	.	+	.	source_transcript=ENST00000755367.1;source_transcript_name=TTTY16-206;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000786;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000786;transcript_name=HG00140_ch_T0000786;gene_name=TTTY16;ID=exon:HG00140_ch_T0000786:0;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8335919	8368368	.	+	.	source_transcript=ENST00000755367.1;source_transcript_name=TTTY16-206;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000786;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000786;transcript_name=HG00140_ch_T0000786;gene_name=TTTY16;ID=intron:HG00140_ch_T0000786:0;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8368369	8368552	.	+	.	source_transcript=ENST00000755367.1;source_transcript_name=TTTY16-206;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000786;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000786;transcript_name=HG00140_ch_T0000786;gene_name=TTTY16;ID=exon:HG00140_ch_T0000786:1;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8368553	8402026	.	+	.	source_transcript=ENST00000755367.1;source_transcript_name=TTTY16-206;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000786;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000786;transcript_name=HG00140_ch_T0000786;gene_name=TTTY16;ID=intron:HG00140_ch_T0000786:1;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8402027	8402467	.	+	.	source_transcript=ENST00000755367.1;source_transcript_name=TTTY16-206;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000786;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000786;transcript_name=HG00140_ch_T0000786;gene_name=TTTY16;ID=exon:HG00140_ch_T0000786:2;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	8341147	8402465	1000	+	.	source_transcript=ENST00000755369.1;source_transcript_name=TTTY16-208;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755369.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755369.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000787;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_G0000244;transcript_name=HG00140_ch_T0000787;gene_name=TTTY16;ID=HG00140_ch_T0000787;Name=TTTY16
HG00140_chrY	CAT	exon	8341147	8341257	.	+	.	source_transcript=ENST00000755369.1;source_transcript_name=TTTY16-208;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755369.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755369.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000787;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000787;transcript_name=HG00140_ch_T0000787;gene_name=TTTY16;ID=exon:HG00140_ch_T0000787:0;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8341258	8368368	.	+	.	source_transcript=ENST00000755369.1;source_transcript_name=TTTY16-208;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755369.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755369.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000787;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000787;transcript_name=HG00140_ch_T0000787;gene_name=TTTY16;ID=intron:HG00140_ch_T0000787:0;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8368369	8368552	.	+	.	source_transcript=ENST00000755369.1;source_transcript_name=TTTY16-208;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755369.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755369.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000787;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000787;transcript_name=HG00140_ch_T0000787;gene_name=TTTY16;ID=exon:HG00140_ch_T0000787:1;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8368553	8402026	.	+	.	source_transcript=ENST00000755369.1;source_transcript_name=TTTY16-208;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755369.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755369.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000787;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000787;transcript_name=HG00140_ch_T0000787;gene_name=TTTY16;ID=intron:HG00140_ch_T0000787:1;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8402027	8402465	.	+	.	source_transcript=ENST00000755369.1;source_transcript_name=TTTY16-208;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755369.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755369.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000787;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000787;transcript_name=HG00140_ch_T0000787;gene_name=TTTY16;ID=exon:HG00140_ch_T0000787:2;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	8341151	8402467	1000	+	.	source_transcript=ENST00000755370.1;source_transcript_name=TTTY16-209;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755370.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755370.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000788;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_G0000244;transcript_name=HG00140_ch_T0000788;gene_name=TTTY16;ID=HG00140_ch_T0000788;Name=TTTY16
HG00140_chrY	CAT	exon	8341151	8341257	.	+	.	source_transcript=ENST00000755370.1;source_transcript_name=TTTY16-209;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755370.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755370.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000788;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000788;transcript_name=HG00140_ch_T0000788;gene_name=TTTY16;ID=exon:HG00140_ch_T0000788:0;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8341258	8368365	.	+	.	source_transcript=ENST00000755370.1;source_transcript_name=TTTY16-209;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755370.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755370.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000788;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000788;transcript_name=HG00140_ch_T0000788;gene_name=TTTY16;ID=intron:HG00140_ch_T0000788:0;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8368366	8368552	.	+	.	source_transcript=ENST00000755370.1;source_transcript_name=TTTY16-209;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755370.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755370.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000788;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000788;transcript_name=HG00140_ch_T0000788;gene_name=TTTY16;ID=exon:HG00140_ch_T0000788:1;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8368553	8402026	.	+	.	source_transcript=ENST00000755370.1;source_transcript_name=TTTY16-209;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755370.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755370.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000788;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000788;transcript_name=HG00140_ch_T0000788;gene_name=TTTY16;ID=intron:HG00140_ch_T0000788:1;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8402027	8402467	.	+	.	source_transcript=ENST00000755370.1;source_transcript_name=TTTY16-209;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755370.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755370.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000788;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000788;transcript_name=HG00140_ch_T0000788;gene_name=TTTY16;ID=exon:HG00140_ch_T0000788:2;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	8341220	8402459	1000	+	.	source_transcript=ENST00000755371.1;source_transcript_name=TTTY16-210;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755371.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000789;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_G0000244;transcript_name=HG00140_ch_T0000789;gene_name=TTTY16;ID=HG00140_ch_T0000789;Name=TTTY16
HG00140_chrY	CAT	exon	8341220	8341257	.	+	.	source_transcript=ENST00000755371.1;source_transcript_name=TTTY16-210;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000789;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000789;transcript_name=HG00140_ch_T0000789;gene_name=TTTY16;ID=exon:HG00140_ch_T0000789:0;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8341258	8368368	.	+	.	source_transcript=ENST00000755371.1;source_transcript_name=TTTY16-210;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000789;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000789;transcript_name=HG00140_ch_T0000789;gene_name=TTTY16;ID=intron:HG00140_ch_T0000789:0;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8368369	8368552	.	+	.	source_transcript=ENST00000755371.1;source_transcript_name=TTTY16-210;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000789;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000789;transcript_name=HG00140_ch_T0000789;gene_name=TTTY16;ID=exon:HG00140_ch_T0000789:1;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8368553	8375059	.	+	.	source_transcript=ENST00000755371.1;source_transcript_name=TTTY16-210;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000789;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000789;transcript_name=HG00140_ch_T0000789;gene_name=TTTY16;ID=intron:HG00140_ch_T0000789:1;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8375060	8375119	.	+	.	source_transcript=ENST00000755371.1;source_transcript_name=TTTY16-210;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000789;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000789;transcript_name=HG00140_ch_T0000789;gene_name=TTTY16;ID=exon:HG00140_ch_T0000789:2;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8375120	8402026	.	+	.	source_transcript=ENST00000755371.1;source_transcript_name=TTTY16-210;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000789;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000789;transcript_name=HG00140_ch_T0000789;gene_name=TTTY16;ID=intron:HG00140_ch_T0000789:2;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8402027	8402459	.	+	.	source_transcript=ENST00000755371.1;source_transcript_name=TTTY16-210;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000789;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000789;transcript_name=HG00140_ch_T0000789;gene_name=TTTY16;ID=exon:HG00140_ch_T0000789:3;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	8341263	8402459	1000	+	.	source_transcript=ENST00000755372.1;source_transcript_name=TTTY16-211;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755372.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000790;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_G0000244;transcript_name=HG00140_ch_T0000790;gene_name=TTTY16;ID=HG00140_ch_T0000790;Name=TTTY16
HG00140_chrY	CAT	exon	8341263	8341474	.	+	.	source_transcript=ENST00000755372.1;source_transcript_name=TTTY16-211;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000790;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000790;transcript_name=HG00140_ch_T0000790;gene_name=TTTY16;ID=exon:HG00140_ch_T0000790:0;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8341475	8368365	.	+	.	source_transcript=ENST00000755372.1;source_transcript_name=TTTY16-211;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000790;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000790;transcript_name=HG00140_ch_T0000790;gene_name=TTTY16;ID=intron:HG00140_ch_T0000790:0;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8368366	8368552	.	+	.	source_transcript=ENST00000755372.1;source_transcript_name=TTTY16-211;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000790;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000790;transcript_name=HG00140_ch_T0000790;gene_name=TTTY16;ID=exon:HG00140_ch_T0000790:1;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8368553	8402026	.	+	.	source_transcript=ENST00000755372.1;source_transcript_name=TTTY16-211;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000790;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000790;transcript_name=HG00140_ch_T0000790;gene_name=TTTY16;ID=intron:HG00140_ch_T0000790:1;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8402027	8402459	.	+	.	source_transcript=ENST00000755372.1;source_transcript_name=TTTY16-211;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000790;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000790;transcript_name=HG00140_ch_T0000790;gene_name=TTTY16;ID=exon:HG00140_ch_T0000790:2;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	8341361	8451813	1000	+	.	source_transcript=ENST00000755365.1;source_transcript_name=TTTY16-204;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755365.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000791;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_G0000244;transcript_name=HG00140_ch_T0000791;gene_name=TTTY16;ID=HG00140_ch_T0000791;Name=TTTY16
HG00140_chrY	CAT	exon	8341361	8341474	.	+	.	source_transcript=ENST00000755365.1;source_transcript_name=TTTY16-204;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755365.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000791;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000791;transcript_name=HG00140_ch_T0000791;gene_name=TTTY16;ID=exon:HG00140_ch_T0000791:0;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8341475	8368365	.	+	.	source_transcript=ENST00000755365.1;source_transcript_name=TTTY16-204;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755365.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000791;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000791;transcript_name=HG00140_ch_T0000791;gene_name=TTTY16;ID=intron:HG00140_ch_T0000791:0;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8368366	8368552	.	+	.	source_transcript=ENST00000755365.1;source_transcript_name=TTTY16-204;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755365.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000791;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000791;transcript_name=HG00140_ch_T0000791;gene_name=TTTY16;ID=exon:HG00140_ch_T0000791:1;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8368553	8451098	.	+	.	source_transcript=ENST00000755365.1;source_transcript_name=TTTY16-204;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755365.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000791;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000791;transcript_name=HG00140_ch_T0000791;gene_name=TTTY16;ID=intron:HG00140_ch_T0000791:1;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8451099	8451813	.	+	.	source_transcript=ENST00000755365.1;source_transcript_name=TTTY16-204;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755365.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000791;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000791;transcript_name=HG00140_ch_T0000791;gene_name=TTTY16;ID=exon:HG00140_ch_T0000791:2;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	8367832	8402459	1000	+	.	source_transcript=ENST00000755373.1;source_transcript_name=TTTY16-212;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755373.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755373.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000793;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_G0000244;transcript_name=HG00140_ch_T0000793;gene_name=TTTY16;ID=HG00140_ch_T0000793;Name=TTTY16
HG00140_chrY	CAT	exon	8367832	8367988	.	+	.	source_transcript=ENST00000755373.1;source_transcript_name=TTTY16-212;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755373.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755373.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000793;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000793;transcript_name=HG00140_ch_T0000793;gene_name=TTTY16;ID=exon:HG00140_ch_T0000793:0;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8367989	8368368	.	+	.	source_transcript=ENST00000755373.1;source_transcript_name=TTTY16-212;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755373.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755373.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000793;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000793;transcript_name=HG00140_ch_T0000793;gene_name=TTTY16;ID=intron:HG00140_ch_T0000793:0;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8368369	8368552	.	+	.	source_transcript=ENST00000755373.1;source_transcript_name=TTTY16-212;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755373.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755373.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000793;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000793;transcript_name=HG00140_ch_T0000793;gene_name=TTTY16;ID=exon:HG00140_ch_T0000793:1;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8368553	8402026	.	+	.	source_transcript=ENST00000755373.1;source_transcript_name=TTTY16-212;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755373.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755373.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000793;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000793;transcript_name=HG00140_ch_T0000793;gene_name=TTTY16;ID=intron:HG00140_ch_T0000793:1;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8402027	8402459	.	+	.	source_transcript=ENST00000755373.1;source_transcript_name=TTTY16-212;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755373.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755373.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000793;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000793;transcript_name=HG00140_ch_T0000793;gene_name=TTTY16;ID=exon:HG00140_ch_T0000793:2;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	8367846	8453663	1000	+	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000794;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_G0000244;transcript_name=HG00140_ch_T0000794;gene_name=TTTY16;ID=HG00140_ch_T0000794;Name=TTTY16
HG00140_chrY	CAT	exon	8367846	8367988	.	+	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000794;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000794;transcript_name=HG00140_ch_T0000794;gene_name=TTTY16;ID=exon:HG00140_ch_T0000794:0;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8367989	8368368	.	+	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000794;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000794;transcript_name=HG00140_ch_T0000794;gene_name=TTTY16;ID=intron:HG00140_ch_T0000794:0;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8368369	8368552	.	+	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000794;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000794;transcript_name=HG00140_ch_T0000794;gene_name=TTTY16;ID=exon:HG00140_ch_T0000794:1;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8368553	8375055	.	+	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000794;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000794;transcript_name=HG00140_ch_T0000794;gene_name=TTTY16;ID=intron:HG00140_ch_T0000794:1;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8375056	8375119	.	+	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000794;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000794;transcript_name=HG00140_ch_T0000794;gene_name=TTTY16;ID=exon:HG00140_ch_T0000794:2;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8375120	8435277	.	+	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000794;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000794;transcript_name=HG00140_ch_T0000794;gene_name=TTTY16;ID=intron:HG00140_ch_T0000794:2;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8435278	8435506	.	+	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000794;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000794;transcript_name=HG00140_ch_T0000794;gene_name=TTTY16;ID=exon:HG00140_ch_T0000794:3;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8435507	8437055	.	+	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000794;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000794;transcript_name=HG00140_ch_T0000794;gene_name=TTTY16;ID=intron:HG00140_ch_T0000794:3;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8437056	8437204	.	+	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000794;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000794;transcript_name=HG00140_ch_T0000794;gene_name=TTTY16;ID=exon:HG00140_ch_T0000794:4;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8437205	8447111	.	+	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000794;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000794;transcript_name=HG00140_ch_T0000794;gene_name=TTTY16;ID=intron:HG00140_ch_T0000794:4;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8447112	8447188	.	+	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000794;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000794;transcript_name=HG00140_ch_T0000794;gene_name=TTTY16;ID=exon:HG00140_ch_T0000794:5;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8447189	8448888	.	+	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000794;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000794;transcript_name=HG00140_ch_T0000794;gene_name=TTTY16;ID=intron:HG00140_ch_T0000794:5;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8448889	8449189	.	+	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000794;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000794;transcript_name=HG00140_ch_T0000794;gene_name=TTTY16;ID=exon:HG00140_ch_T0000794:6;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8449190	8451098	.	+	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000794;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000794;transcript_name=HG00140_ch_T0000794;gene_name=TTTY16;ID=intron:HG00140_ch_T0000794:6;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8451099	8451293	.	+	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000794;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000794;transcript_name=HG00140_ch_T0000794;gene_name=TTTY16;ID=exon:HG00140_ch_T0000794:7;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8451294	8452588	.	+	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000794;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000794;transcript_name=HG00140_ch_T0000794;gene_name=TTTY16;ID=intron:HG00140_ch_T0000794:7;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8452589	8453663	.	+	.	source_transcript=ENST00000755366.1;source_transcript_name=TTTY16-205;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755366.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755366.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000794;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000794;transcript_name=HG00140_ch_T0000794;gene_name=TTTY16;ID=exon:HG00140_ch_T0000794:8;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	8374806	8402459	1000	+	.	source_transcript=ENST00000755374.1;source_transcript_name=TTTY16-213;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755374.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000796;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_G0000244;transcript_name=HG00140_ch_T0000796;gene_name=TTTY16;ID=HG00140_ch_T0000796;Name=TTTY16
HG00140_chrY	CAT	exon	8374806	8375119	.	+	.	source_transcript=ENST00000755374.1;source_transcript_name=TTTY16-213;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755374.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000796;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000796;transcript_name=HG00140_ch_T0000796;gene_name=TTTY16;ID=exon:HG00140_ch_T0000796:0;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8375120	8402026	.	+	.	source_transcript=ENST00000755374.1;source_transcript_name=TTTY16-213;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755374.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000796;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000796;transcript_name=HG00140_ch_T0000796;gene_name=TTTY16;ID=intron:HG00140_ch_T0000796:0;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8402027	8402459	.	+	.	source_transcript=ENST00000755374.1;source_transcript_name=TTTY16-213;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755374.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000796;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000796;transcript_name=HG00140_ch_T0000796;gene_name=TTTY16;ID=exon:HG00140_ch_T0000796:1;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	8374863	8443512	1000	+	.	source_transcript=ENST00000755368.1;source_transcript_name=TTTY16-207;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755368.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000797;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_G0000244;transcript_name=HG00140_ch_T0000797;gene_name=TTTY16;ID=HG00140_ch_T0000797;Name=TTTY16
HG00140_chrY	CAT	exon	8374863	8375119	.	+	.	source_transcript=ENST00000755368.1;source_transcript_name=TTTY16-207;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755368.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000797;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000797;transcript_name=HG00140_ch_T0000797;gene_name=TTTY16;ID=exon:HG00140_ch_T0000797:0;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8375120	8435277	.	+	.	source_transcript=ENST00000755368.1;source_transcript_name=TTTY16-207;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755368.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000797;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000797;transcript_name=HG00140_ch_T0000797;gene_name=TTTY16;ID=intron:HG00140_ch_T0000797:0;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8435278	8435506	.	+	.	source_transcript=ENST00000755368.1;source_transcript_name=TTTY16-207;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755368.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000797;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000797;transcript_name=HG00140_ch_T0000797;gene_name=TTTY16;ID=exon:HG00140_ch_T0000797:1;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8435507	8437055	.	+	.	source_transcript=ENST00000755368.1;source_transcript_name=TTTY16-207;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755368.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000797;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000797;transcript_name=HG00140_ch_T0000797;gene_name=TTTY16;ID=intron:HG00140_ch_T0000797:1;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8437056	8437204	.	+	.	source_transcript=ENST00000755368.1;source_transcript_name=TTTY16-207;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755368.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000797;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000797;transcript_name=HG00140_ch_T0000797;gene_name=TTTY16;ID=exon:HG00140_ch_T0000797:2;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8437205	8443451	.	+	.	source_transcript=ENST00000755368.1;source_transcript_name=TTTY16-207;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755368.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000797;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000797;transcript_name=HG00140_ch_T0000797;gene_name=TTTY16;ID=intron:HG00140_ch_T0000797:2;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8443452	8443512	.	+	.	source_transcript=ENST00000755368.1;source_transcript_name=TTTY16-207;source_gene=ENSG00000290323.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290323.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755368.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;transcript_id=HG00140_ch_T0000797;gene_id=HG00140_ch_G0000244;Parent=HG00140_ch_T0000797;transcript_name=HG00140_ch_T0000797;gene_name=TTTY16;ID=exon:HG00140_ch_T0000797:3;Name=TTTY16;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	8354047	8357738	.	-	.	source_gene_common_name=ENSG00000298447;source_gene=ENSG00000298447.1;alternative_source_transcripts=ENST00000755553.1,ENST00000755553.1;gene_id=HG00140_ch_G0000245;gene_biotype=lncRNA;gene_name=ENSG00000298447;gene_sources=liftoff;ID=HG00140_ch_G0000245;Name=ENSG00000298447
HG00140_chrY	CAT	transcript	8354047	8357738	1000	-	.	source_transcript=ENST00000755553.1;source_transcript_name=ENST00000755553;source_gene=ENSG00000298447.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298447.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755553.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298447;alternative_source_transcripts=ENST00000755553.1,ENST00000755553.1;transcript_id=HG00140_ch_T0000792;gene_id=HG00140_ch_G0000245;Parent=HG00140_ch_G0000245;transcript_name=HG00140_ch_T0000792;gene_name=ENSG00000298447;ID=HG00140_ch_T0000792;Name=ENSG00000298447
HG00140_chrY	CAT	exon	8354047	8354793	.	-	.	source_transcript=ENST00000755553.1;source_transcript_name=ENST00000755553;source_gene=ENSG00000298447.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298447.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755553.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298447;alternative_source_transcripts=ENST00000755553.1,ENST00000755553.1;transcript_id=HG00140_ch_T0000792;gene_id=HG00140_ch_G0000245;Parent=HG00140_ch_T0000792;transcript_name=HG00140_ch_T0000792;gene_name=ENSG00000298447;ID=exon:HG00140_ch_T0000792:0;Name=ENSG00000298447;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8354794	8357443	.	-	.	source_transcript=ENST00000755553.1;source_transcript_name=ENST00000755553;source_gene=ENSG00000298447.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298447.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755553.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298447;alternative_source_transcripts=ENST00000755553.1,ENST00000755553.1;transcript_id=HG00140_ch_T0000792;gene_id=HG00140_ch_G0000245;Parent=HG00140_ch_T0000792;transcript_name=HG00140_ch_T0000792;gene_name=ENSG00000298447;ID=intron:HG00140_ch_T0000792:0;Name=ENSG00000298447;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8357444	8357738	.	-	.	source_transcript=ENST00000755553.1;source_transcript_name=ENST00000755553;source_gene=ENSG00000298447.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298447.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755553.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298447;alternative_source_transcripts=ENST00000755553.1,ENST00000755553.1;transcript_id=HG00140_ch_T0000792;gene_id=HG00140_ch_G0000245;Parent=HG00140_ch_T0000792;transcript_name=HG00140_ch_T0000792;gene_name=ENSG00000298447;ID=exon:HG00140_ch_T0000792:1;Name=ENSG00000298447;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	8368366	8435390	.	+	.	source_gene_common_name=RFTN1P1;source_gene=ENSG00000234795.11;gene_id=HG00140_ch_G0000246;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RFTN1P1;gene_sources=liftoff;ID=HG00140_ch_G0000246;Name=RFTN1P1
HG00140_chrY	CAT	transcript	8368366	8435390	1000	+	.	source_transcript=ENST00000455527.5;source_transcript_name=RFTN1P1-201;source_gene=ENSG00000234795.11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234795.11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455527.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455527.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RFTN1P1;transcript_id=HG00140_ch_T0000795;gene_id=HG00140_ch_G0000246;Parent=HG00140_ch_G0000246;transcript_name=HG00140_ch_T0000795;gene_name=RFTN1P1;ID=HG00140_ch_T0000795;Name=RFTN1P1
HG00140_chrY	CAT	exon	8368366	8368552	.	+	.	source_transcript=ENST00000455527.5;source_transcript_name=RFTN1P1-201;source_gene=ENSG00000234795.11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234795.11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455527.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455527.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RFTN1P1;transcript_id=HG00140_ch_T0000795;gene_id=HG00140_ch_G0000246;Parent=HG00140_ch_T0000795;transcript_name=HG00140_ch_T0000795;gene_name=RFTN1P1;ID=exon:HG00140_ch_T0000795:0;Name=RFTN1P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8368553	8395581	.	+	.	source_transcript=ENST00000455527.5;source_transcript_name=RFTN1P1-201;source_gene=ENSG00000234795.11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234795.11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455527.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455527.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RFTN1P1;transcript_id=HG00140_ch_T0000795;gene_id=HG00140_ch_G0000246;Parent=HG00140_ch_T0000795;transcript_name=HG00140_ch_T0000795;gene_name=RFTN1P1;ID=intron:HG00140_ch_T0000795:0;Name=RFTN1P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8395582	8395690	.	+	.	source_transcript=ENST00000455527.5;source_transcript_name=RFTN1P1-201;source_gene=ENSG00000234795.11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234795.11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455527.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455527.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RFTN1P1;transcript_id=HG00140_ch_T0000795;gene_id=HG00140_ch_G0000246;Parent=HG00140_ch_T0000795;transcript_name=HG00140_ch_T0000795;gene_name=RFTN1P1;ID=exon:HG00140_ch_T0000795:1;Name=RFTN1P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8395691	8415209	.	+	.	source_transcript=ENST00000455527.5;source_transcript_name=RFTN1P1-201;source_gene=ENSG00000234795.11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234795.11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455527.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455527.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RFTN1P1;transcript_id=HG00140_ch_T0000795;gene_id=HG00140_ch_G0000246;Parent=HG00140_ch_T0000795;transcript_name=HG00140_ch_T0000795;gene_name=RFTN1P1;ID=intron:HG00140_ch_T0000795:1;Name=RFTN1P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8415210	8415593	.	+	.	source_transcript=ENST00000455527.5;source_transcript_name=RFTN1P1-201;source_gene=ENSG00000234795.11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234795.11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455527.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455527.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RFTN1P1;transcript_id=HG00140_ch_T0000795;gene_id=HG00140_ch_G0000246;Parent=HG00140_ch_T0000795;transcript_name=HG00140_ch_T0000795;gene_name=RFTN1P1;ID=exon:HG00140_ch_T0000795:2;Name=RFTN1P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8415594	8422991	.	+	.	source_transcript=ENST00000455527.5;source_transcript_name=RFTN1P1-201;source_gene=ENSG00000234795.11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234795.11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455527.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455527.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RFTN1P1;transcript_id=HG00140_ch_T0000795;gene_id=HG00140_ch_G0000246;Parent=HG00140_ch_T0000795;transcript_name=HG00140_ch_T0000795;gene_name=RFTN1P1;ID=intron:HG00140_ch_T0000795:2;Name=RFTN1P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8422992	8423194	.	+	.	source_transcript=ENST00000455527.5;source_transcript_name=RFTN1P1-201;source_gene=ENSG00000234795.11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234795.11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455527.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455527.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RFTN1P1;transcript_id=HG00140_ch_T0000795;gene_id=HG00140_ch_G0000246;Parent=HG00140_ch_T0000795;transcript_name=HG00140_ch_T0000795;gene_name=RFTN1P1;ID=exon:HG00140_ch_T0000795:3;Name=RFTN1P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8423195	8435277	.	+	.	source_transcript=ENST00000455527.5;source_transcript_name=RFTN1P1-201;source_gene=ENSG00000234795.11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234795.11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455527.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455527.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RFTN1P1;transcript_id=HG00140_ch_T0000795;gene_id=HG00140_ch_G0000246;Parent=HG00140_ch_T0000795;transcript_name=HG00140_ch_T0000795;gene_name=RFTN1P1;ID=intron:HG00140_ch_T0000795:3;Name=RFTN1P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8435278	8435390	.	+	.	source_transcript=ENST00000455527.5;source_transcript_name=RFTN1P1-201;source_gene=ENSG00000234795.11;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234795.11;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000455527.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000455527.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RFTN1P1;transcript_id=HG00140_ch_T0000795;gene_id=HG00140_ch_G0000246;Parent=HG00140_ch_T0000795;transcript_name=HG00140_ch_T0000795;gene_name=RFTN1P1;ID=exon:HG00140_ch_T0000795:4;Name=RFTN1P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	8455695	8457862	.	-	.	source_gene_common_name=ENSG00000236690;source_gene=ENSG00000236690.2;alternative_source_transcripts=ENST00000421675.1,ENST00000421675.1;gene_id=HG00140_ch_G0000247;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000236690;gene_sources=liftoff;ID=HG00140_ch_G0000247;Name=ENSG00000236690
HG00140_chrY	CAT	transcript	8455695	8457862	1000	-	.	source_transcript=ENST00000421675.1;source_transcript_name=ENST00000421675;source_gene=ENSG00000236690.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236690.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421675.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236690;alternative_source_transcripts=ENST00000421675.1,ENST00000421675.1;transcript_id=HG00140_ch_T0000798;gene_id=HG00140_ch_G0000247;Parent=HG00140_ch_G0000247;transcript_name=HG00140_ch_T0000798;gene_name=ENSG00000236690;ID=HG00140_ch_T0000798;Name=ENSG00000236690
HG00140_chrY	CAT	exon	8455695	8455741	.	-	.	source_transcript=ENST00000421675.1;source_transcript_name=ENST00000421675;source_gene=ENSG00000236690.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236690.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421675.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236690;alternative_source_transcripts=ENST00000421675.1,ENST00000421675.1;transcript_id=HG00140_ch_T0000798;gene_id=HG00140_ch_G0000247;Parent=HG00140_ch_T0000798;transcript_name=HG00140_ch_T0000798;gene_name=ENSG00000236690;ID=exon:HG00140_ch_T0000798:0;Name=ENSG00000236690;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8455742	8455839	.	-	.	source_transcript=ENST00000421675.1;source_transcript_name=ENST00000421675;source_gene=ENSG00000236690.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236690.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421675.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236690;alternative_source_transcripts=ENST00000421675.1,ENST00000421675.1;transcript_id=HG00140_ch_T0000798;gene_id=HG00140_ch_G0000247;Parent=HG00140_ch_T0000798;transcript_name=HG00140_ch_T0000798;gene_name=ENSG00000236690;ID=intron:HG00140_ch_T0000798:0;Name=ENSG00000236690;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8455840	8456009	.	-	.	source_transcript=ENST00000421675.1;source_transcript_name=ENST00000421675;source_gene=ENSG00000236690.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236690.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421675.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236690;alternative_source_transcripts=ENST00000421675.1,ENST00000421675.1;transcript_id=HG00140_ch_T0000798;gene_id=HG00140_ch_G0000247;Parent=HG00140_ch_T0000798;transcript_name=HG00140_ch_T0000798;gene_name=ENSG00000236690;ID=exon:HG00140_ch_T0000798:1;Name=ENSG00000236690;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8456010	8456095	.	-	.	source_transcript=ENST00000421675.1;source_transcript_name=ENST00000421675;source_gene=ENSG00000236690.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236690.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421675.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236690;alternative_source_transcripts=ENST00000421675.1,ENST00000421675.1;transcript_id=HG00140_ch_T0000798;gene_id=HG00140_ch_G0000247;Parent=HG00140_ch_T0000798;transcript_name=HG00140_ch_T0000798;gene_name=ENSG00000236690;ID=intron:HG00140_ch_T0000798:1;Name=ENSG00000236690;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8456096	8456213	.	-	.	source_transcript=ENST00000421675.1;source_transcript_name=ENST00000421675;source_gene=ENSG00000236690.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236690.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421675.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236690;alternative_source_transcripts=ENST00000421675.1,ENST00000421675.1;transcript_id=HG00140_ch_T0000798;gene_id=HG00140_ch_G0000247;Parent=HG00140_ch_T0000798;transcript_name=HG00140_ch_T0000798;gene_name=ENSG00000236690;ID=exon:HG00140_ch_T0000798:2;Name=ENSG00000236690;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8456214	8457535	.	-	.	source_transcript=ENST00000421675.1;source_transcript_name=ENST00000421675;source_gene=ENSG00000236690.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236690.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421675.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236690;alternative_source_transcripts=ENST00000421675.1,ENST00000421675.1;transcript_id=HG00140_ch_T0000798;gene_id=HG00140_ch_G0000247;Parent=HG00140_ch_T0000798;transcript_name=HG00140_ch_T0000798;gene_name=ENSG00000236690;ID=intron:HG00140_ch_T0000798:2;Name=ENSG00000236690;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8457536	8457862	.	-	.	source_transcript=ENST00000421675.1;source_transcript_name=ENST00000421675;source_gene=ENSG00000236690.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236690.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421675.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236690;alternative_source_transcripts=ENST00000421675.1,ENST00000421675.1;transcript_id=HG00140_ch_T0000798;gene_id=HG00140_ch_G0000247;Parent=HG00140_ch_T0000798;transcript_name=HG00140_ch_T0000798;gene_name=ENSG00000236690;ID=exon:HG00140_ch_T0000798:3;Name=ENSG00000236690;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	8458825	8460634	.	+	.	source_gene_common_name=TSPY12P;source_gene=ENSG00000236435.1;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;gene_id=HG00140_ch_G0000248;gene_biotype=unprocessed_pseudogene;gene_name=TSPY12P;gene_sources=liftoff;ID=HG00140_ch_G0000248;Name=TSPY12P
HG00140_chrY	CAT	transcript	8458825	8460634	1000	+	.	source_transcript=ENST00000421279.1;source_transcript_name=TSPY12P-201;source_gene=ENSG00000236435.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236435.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421279.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY12P;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;transcript_id=HG00140_ch_T0000799;gene_id=HG00140_ch_G0000248;Parent=HG00140_ch_G0000248;transcript_name=HG00140_ch_T0000799;gene_name=TSPY12P;ID=HG00140_ch_T0000799;Name=TSPY12P
HG00140_chrY	CAT	exon	8458825	8459296	.	+	.	source_transcript=ENST00000421279.1;source_transcript_name=TSPY12P-201;source_gene=ENSG00000236435.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236435.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421279.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY12P;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;transcript_id=HG00140_ch_T0000799;gene_id=HG00140_ch_G0000248;Parent=HG00140_ch_T0000799;transcript_name=HG00140_ch_T0000799;gene_name=TSPY12P;ID=exon:HG00140_ch_T0000799:0;Name=TSPY12P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8459297	8459916	.	+	.	source_transcript=ENST00000421279.1;source_transcript_name=TSPY12P-201;source_gene=ENSG00000236435.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236435.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421279.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY12P;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;transcript_id=HG00140_ch_T0000799;gene_id=HG00140_ch_G0000248;Parent=HG00140_ch_T0000799;transcript_name=HG00140_ch_T0000799;gene_name=TSPY12P;ID=intron:HG00140_ch_T0000799:0;Name=TSPY12P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8459917	8459990	.	+	.	source_transcript=ENST00000421279.1;source_transcript_name=TSPY12P-201;source_gene=ENSG00000236435.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236435.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421279.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY12P;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;transcript_id=HG00140_ch_T0000799;gene_id=HG00140_ch_G0000248;Parent=HG00140_ch_T0000799;transcript_name=HG00140_ch_T0000799;gene_name=TSPY12P;ID=exon:HG00140_ch_T0000799:1;Name=TSPY12P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8459991	8460121	.	+	.	source_transcript=ENST00000421279.1;source_transcript_name=TSPY12P-201;source_gene=ENSG00000236435.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236435.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421279.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY12P;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;transcript_id=HG00140_ch_T0000799;gene_id=HG00140_ch_G0000248;Parent=HG00140_ch_T0000799;transcript_name=HG00140_ch_T0000799;gene_name=TSPY12P;ID=intron:HG00140_ch_T0000799:1;Name=TSPY12P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8460122	8460232	.	+	.	source_transcript=ENST00000421279.1;source_transcript_name=TSPY12P-201;source_gene=ENSG00000236435.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236435.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421279.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY12P;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;transcript_id=HG00140_ch_T0000799;gene_id=HG00140_ch_G0000248;Parent=HG00140_ch_T0000799;transcript_name=HG00140_ch_T0000799;gene_name=TSPY12P;ID=exon:HG00140_ch_T0000799:2;Name=TSPY12P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8460233	8460330	.	+	.	source_transcript=ENST00000421279.1;source_transcript_name=TSPY12P-201;source_gene=ENSG00000236435.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236435.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421279.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY12P;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;transcript_id=HG00140_ch_T0000799;gene_id=HG00140_ch_G0000248;Parent=HG00140_ch_T0000799;transcript_name=HG00140_ch_T0000799;gene_name=TSPY12P;ID=intron:HG00140_ch_T0000799:2;Name=TSPY12P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8460331	8460476	.	+	.	source_transcript=ENST00000421279.1;source_transcript_name=TSPY12P-201;source_gene=ENSG00000236435.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236435.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421279.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY12P;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;transcript_id=HG00140_ch_T0000799;gene_id=HG00140_ch_G0000248;Parent=HG00140_ch_T0000799;transcript_name=HG00140_ch_T0000799;gene_name=TSPY12P;ID=exon:HG00140_ch_T0000799:3;Name=TSPY12P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8460477	8460569	.	+	.	source_transcript=ENST00000421279.1;source_transcript_name=TSPY12P-201;source_gene=ENSG00000236435.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236435.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421279.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY12P;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;transcript_id=HG00140_ch_T0000799;gene_id=HG00140_ch_G0000248;Parent=HG00140_ch_T0000799;transcript_name=HG00140_ch_T0000799;gene_name=TSPY12P;ID=intron:HG00140_ch_T0000799:3;Name=TSPY12P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8460570	8460634	.	+	.	source_transcript=ENST00000421279.1;source_transcript_name=TSPY12P-201;source_gene=ENSG00000236435.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236435.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421279.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY12P;alternative_source_transcripts=ENST00000421279.1,ENST00000421279.1;transcript_id=HG00140_ch_T0000799;gene_id=HG00140_ch_G0000248;Parent=HG00140_ch_T0000799;transcript_name=HG00140_ch_T0000799;gene_name=TSPY12P;ID=exon:HG00140_ch_T0000799:4;Name=TSPY12P;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	8467337	8469466	.	-	.	source_gene_common_name=ENSG00000223422;source_gene=ENSG00000223422.1;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;gene_id=HG00140_ch_G0000249;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000223422;gene_sources=liftoff;ID=HG00140_ch_G0000249;Name=ENSG00000223422
HG00140_chrY	CAT	transcript	8467337	8469466	1000	-	.	source_transcript=ENST00000439805.1;source_transcript_name=ENST00000439805;source_gene=ENSG00000223422.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223422.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000439805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439805.1;transcript_score=299.849;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223422;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;transcript_id=HG00140_ch_T0000800;gene_id=HG00140_ch_G0000249;Parent=HG00140_ch_G0000249;transcript_name=HG00140_ch_T0000800;gene_name=ENSG00000223422;ID=HG00140_ch_T0000800;Name=ENSG00000223422
HG00140_chrY	CAT	exon	8467337	8467382	.	-	.	source_transcript=ENST00000439805.1;source_transcript_name=ENST00000439805;source_gene=ENSG00000223422.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223422.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000439805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439805.1;transcript_score=299.849;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223422;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;transcript_id=HG00140_ch_T0000800;gene_id=HG00140_ch_G0000249;Parent=HG00140_ch_T0000800;transcript_name=HG00140_ch_T0000800;gene_name=ENSG00000223422;ID=exon:HG00140_ch_T0000800:0;Name=ENSG00000223422;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8467383	8467500	.	-	.	source_transcript=ENST00000439805.1;source_transcript_name=ENST00000439805;source_gene=ENSG00000223422.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223422.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000439805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439805.1;transcript_score=299.849;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223422;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;transcript_id=HG00140_ch_T0000800;gene_id=HG00140_ch_G0000249;Parent=HG00140_ch_T0000800;transcript_name=HG00140_ch_T0000800;gene_name=ENSG00000223422;ID=intron:HG00140_ch_T0000800:0;Name=ENSG00000223422;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8467501	8467645	.	-	.	source_transcript=ENST00000439805.1;source_transcript_name=ENST00000439805;source_gene=ENSG00000223422.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223422.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000439805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439805.1;transcript_score=299.849;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223422;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;transcript_id=HG00140_ch_T0000800;gene_id=HG00140_ch_G0000249;Parent=HG00140_ch_T0000800;transcript_name=HG00140_ch_T0000800;gene_name=ENSG00000223422;ID=exon:HG00140_ch_T0000800:1;Name=ENSG00000223422;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8467646	8467744	.	-	.	source_transcript=ENST00000439805.1;source_transcript_name=ENST00000439805;source_gene=ENSG00000223422.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223422.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000439805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439805.1;transcript_score=299.849;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223422;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;transcript_id=HG00140_ch_T0000800;gene_id=HG00140_ch_G0000249;Parent=HG00140_ch_T0000800;transcript_name=HG00140_ch_T0000800;gene_name=ENSG00000223422;ID=intron:HG00140_ch_T0000800:1;Name=ENSG00000223422;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8467745	8467837	.	-	.	source_transcript=ENST00000439805.1;source_transcript_name=ENST00000439805;source_gene=ENSG00000223422.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223422.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000439805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439805.1;transcript_score=299.849;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223422;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;transcript_id=HG00140_ch_T0000800;gene_id=HG00140_ch_G0000249;Parent=HG00140_ch_T0000800;transcript_name=HG00140_ch_T0000800;gene_name=ENSG00000223422;ID=exon:HG00140_ch_T0000800:2;Name=ENSG00000223422;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8467838	8468032	.	-	.	source_transcript=ENST00000439805.1;source_transcript_name=ENST00000439805;source_gene=ENSG00000223422.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223422.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000439805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439805.1;transcript_score=299.849;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223422;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;transcript_id=HG00140_ch_T0000800;gene_id=HG00140_ch_G0000249;Parent=HG00140_ch_T0000800;transcript_name=HG00140_ch_T0000800;gene_name=ENSG00000223422;ID=intron:HG00140_ch_T0000800:2;Name=ENSG00000223422;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8468033	8468098	.	-	.	source_transcript=ENST00000439805.1;source_transcript_name=ENST00000439805;source_gene=ENSG00000223422.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223422.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000439805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439805.1;transcript_score=299.849;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223422;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;transcript_id=HG00140_ch_T0000800;gene_id=HG00140_ch_G0000249;Parent=HG00140_ch_T0000800;transcript_name=HG00140_ch_T0000800;gene_name=ENSG00000223422;ID=exon:HG00140_ch_T0000800:3;Name=ENSG00000223422;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8468099	8469154	.	-	.	source_transcript=ENST00000439805.1;source_transcript_name=ENST00000439805;source_gene=ENSG00000223422.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223422.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000439805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439805.1;transcript_score=299.849;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223422;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;transcript_id=HG00140_ch_T0000800;gene_id=HG00140_ch_G0000249;Parent=HG00140_ch_T0000800;transcript_name=HG00140_ch_T0000800;gene_name=ENSG00000223422;ID=intron:HG00140_ch_T0000800:3;Name=ENSG00000223422;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8469155	8469466	.	-	.	source_transcript=ENST00000439805.1;source_transcript_name=ENST00000439805;source_gene=ENSG00000223422.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223422.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000439805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439805.1;transcript_score=299.849;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223422;alternative_source_transcripts=ENST00000439805.1,ENST00000439805.1;transcript_id=HG00140_ch_T0000800;gene_id=HG00140_ch_G0000249;Parent=HG00140_ch_T0000800;transcript_name=HG00140_ch_T0000800;gene_name=ENSG00000223422;ID=exon:HG00140_ch_T0000800:4;Name=ENSG00000223422;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	8472342	8476623	.	+	.	source_gene_common_name=RBMY2HP;source_gene=ENSG00000238073.1;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;gene_id=HG00140_ch_G0000250;gene_biotype=unprocessed_pseudogene;gene_name=RBMY2HP;gene_sources=liftoff;ID=HG00140_ch_G0000250;Name=RBMY2HP
HG00140_chrY	CAT	transcript	8472342	8476623	1000	+	.	source_transcript=ENST00000457961.1;source_transcript_name=RBMY2HP-201;source_gene=ENSG00000238073.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238073.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457961.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2HP;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;transcript_id=HG00140_ch_T0000801;gene_id=HG00140_ch_G0000250;Parent=HG00140_ch_G0000250;transcript_name=HG00140_ch_T0000801;gene_name=RBMY2HP;ID=HG00140_ch_T0000801;Name=RBMY2HP
HG00140_chrY	CAT	exon	8472342	8472455	.	+	.	source_transcript=ENST00000457961.1;source_transcript_name=RBMY2HP-201;source_gene=ENSG00000238073.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238073.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2HP;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;transcript_id=HG00140_ch_T0000801;gene_id=HG00140_ch_G0000250;Parent=HG00140_ch_T0000801;transcript_name=HG00140_ch_T0000801;gene_name=RBMY2HP;ID=exon:HG00140_ch_T0000801:0;Name=RBMY2HP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8472456	8472894	.	+	.	source_transcript=ENST00000457961.1;source_transcript_name=RBMY2HP-201;source_gene=ENSG00000238073.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238073.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2HP;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;transcript_id=HG00140_ch_T0000801;gene_id=HG00140_ch_G0000250;Parent=HG00140_ch_T0000801;transcript_name=HG00140_ch_T0000801;gene_name=RBMY2HP;ID=intron:HG00140_ch_T0000801:0;Name=RBMY2HP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8472895	8473000	.	+	.	source_transcript=ENST00000457961.1;source_transcript_name=RBMY2HP-201;source_gene=ENSG00000238073.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238073.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2HP;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;transcript_id=HG00140_ch_T0000801;gene_id=HG00140_ch_G0000250;Parent=HG00140_ch_T0000801;transcript_name=HG00140_ch_T0000801;gene_name=RBMY2HP;ID=exon:HG00140_ch_T0000801:1;Name=RBMY2HP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8473001	8475627	.	+	.	source_transcript=ENST00000457961.1;source_transcript_name=RBMY2HP-201;source_gene=ENSG00000238073.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238073.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2HP;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;transcript_id=HG00140_ch_T0000801;gene_id=HG00140_ch_G0000250;Parent=HG00140_ch_T0000801;transcript_name=HG00140_ch_T0000801;gene_name=RBMY2HP;ID=intron:HG00140_ch_T0000801:1;Name=RBMY2HP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8475628	8475738	.	+	.	source_transcript=ENST00000457961.1;source_transcript_name=RBMY2HP-201;source_gene=ENSG00000238073.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238073.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2HP;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;transcript_id=HG00140_ch_T0000801;gene_id=HG00140_ch_G0000250;Parent=HG00140_ch_T0000801;transcript_name=HG00140_ch_T0000801;gene_name=RBMY2HP;ID=exon:HG00140_ch_T0000801:2;Name=RBMY2HP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8475739	8475827	.	+	.	source_transcript=ENST00000457961.1;source_transcript_name=RBMY2HP-201;source_gene=ENSG00000238073.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238073.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2HP;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;transcript_id=HG00140_ch_T0000801;gene_id=HG00140_ch_G0000250;Parent=HG00140_ch_T0000801;transcript_name=HG00140_ch_T0000801;gene_name=RBMY2HP;ID=intron:HG00140_ch_T0000801:2;Name=RBMY2HP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8475828	8475916	.	+	.	source_transcript=ENST00000457961.1;source_transcript_name=RBMY2HP-201;source_gene=ENSG00000238073.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238073.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2HP;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;transcript_id=HG00140_ch_T0000801;gene_id=HG00140_ch_G0000250;Parent=HG00140_ch_T0000801;transcript_name=HG00140_ch_T0000801;gene_name=RBMY2HP;ID=exon:HG00140_ch_T0000801:3;Name=RBMY2HP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8475917	8476323	.	+	.	source_transcript=ENST00000457961.1;source_transcript_name=RBMY2HP-201;source_gene=ENSG00000238073.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238073.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2HP;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;transcript_id=HG00140_ch_T0000801;gene_id=HG00140_ch_G0000250;Parent=HG00140_ch_T0000801;transcript_name=HG00140_ch_T0000801;gene_name=RBMY2HP;ID=intron:HG00140_ch_T0000801:3;Name=RBMY2HP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8476324	8476623	.	+	.	source_transcript=ENST00000457961.1;source_transcript_name=RBMY2HP-201;source_gene=ENSG00000238073.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238073.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2HP;alternative_source_transcripts=ENST00000457961.1,ENST00000457961.1;transcript_id=HG00140_ch_T0000801;gene_id=HG00140_ch_G0000250;Parent=HG00140_ch_T0000801;transcript_name=HG00140_ch_T0000801;gene_name=RBMY2HP;ID=exon:HG00140_ch_T0000801:4;Name=RBMY2HP;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	8490981	8491365	.	-	.	source_gene_common_name=ENSG00000275280;source_gene=ENSG00000275280.1;alternative_source_transcripts=ENST00000619838.1,ENST00000619838.1;gene_id=HG00140_ch_G0000251;gene_biotype=processed_pseudogene;gene_name=ENSG00000275280;gene_sources=liftoff;ID=HG00140_ch_G0000251;Name=ENSG00000275280
HG00140_chrY	CAT	transcript	8490981	8491365	1000	-	.	source_transcript=ENST00000619838.1;source_transcript_name=ENST00000619838;source_gene=ENSG00000275280.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000275280.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000619838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000619838.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275280;alternative_source_transcripts=ENST00000619838.1,ENST00000619838.1;transcript_id=HG00140_ch_T0000802;gene_id=HG00140_ch_G0000251;Parent=HG00140_ch_G0000251;transcript_name=HG00140_ch_T0000802;gene_name=ENSG00000275280;ID=HG00140_ch_T0000802;Name=ENSG00000275280
HG00140_chrY	CAT	exon	8490981	8491365	.	-	.	source_transcript=ENST00000619838.1;source_transcript_name=ENST00000619838;source_gene=ENSG00000275280.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000275280.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000619838.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000619838.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275280;alternative_source_transcripts=ENST00000619838.1,ENST00000619838.1;transcript_id=HG00140_ch_T0000802;gene_id=HG00140_ch_G0000251;Parent=HG00140_ch_T0000802;transcript_name=HG00140_ch_T0000802;gene_name=ENSG00000275280;ID=exon:HG00140_ch_T0000802:0;Name=ENSG00000275280;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	8628491	8714574	.	-	.	source_gene_common_name=ENSG00000295056;source_gene=ENSG00000295056.1;alternative_source_transcripts=ENST00000727700.1,ENST00000727700.1;gene_id=HG00140_ch_G0000252;gene_biotype=lncRNA;gene_name=ENSG00000295056;gene_sources=liftoff;ID=HG00140_ch_G0000252;Name=ENSG00000295056
HG00140_chrY	CAT	transcript	8628491	8714574	1000	-	.	source_transcript=ENST00000727700.1;source_transcript_name=ENST00000727700;source_gene=ENSG00000295056.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295056.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000727700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000727700.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295056;alternative_source_transcripts=ENST00000727700.1,ENST00000727700.1;transcript_id=HG00140_ch_T0000803;gene_id=HG00140_ch_G0000252;Parent=HG00140_ch_G0000252;transcript_name=HG00140_ch_T0000803;gene_name=ENSG00000295056;ID=HG00140_ch_T0000803;Name=ENSG00000295056
HG00140_chrY	CAT	exon	8628491	8628955	.	-	.	source_transcript=ENST00000727700.1;source_transcript_name=ENST00000727700;source_gene=ENSG00000295056.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295056.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000727700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000727700.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295056;alternative_source_transcripts=ENST00000727700.1,ENST00000727700.1;transcript_id=HG00140_ch_T0000803;gene_id=HG00140_ch_G0000252;Parent=HG00140_ch_T0000803;transcript_name=HG00140_ch_T0000803;gene_name=ENSG00000295056;ID=exon:HG00140_ch_T0000803:0;Name=ENSG00000295056;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8628956	8629987	.	-	.	source_transcript=ENST00000727700.1;source_transcript_name=ENST00000727700;source_gene=ENSG00000295056.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295056.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000727700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000727700.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295056;alternative_source_transcripts=ENST00000727700.1,ENST00000727700.1;transcript_id=HG00140_ch_T0000803;gene_id=HG00140_ch_G0000252;Parent=HG00140_ch_T0000803;transcript_name=HG00140_ch_T0000803;gene_name=ENSG00000295056;ID=intron:HG00140_ch_T0000803:0;Name=ENSG00000295056;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8629988	8630096	.	-	.	source_transcript=ENST00000727700.1;source_transcript_name=ENST00000727700;source_gene=ENSG00000295056.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295056.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000727700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000727700.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295056;alternative_source_transcripts=ENST00000727700.1,ENST00000727700.1;transcript_id=HG00140_ch_T0000803;gene_id=HG00140_ch_G0000252;Parent=HG00140_ch_T0000803;transcript_name=HG00140_ch_T0000803;gene_name=ENSG00000295056;ID=exon:HG00140_ch_T0000803:1;Name=ENSG00000295056;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8630097	8647889	.	-	.	source_transcript=ENST00000727700.1;source_transcript_name=ENST00000727700;source_gene=ENSG00000295056.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295056.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000727700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000727700.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295056;alternative_source_transcripts=ENST00000727700.1,ENST00000727700.1;transcript_id=HG00140_ch_T0000803;gene_id=HG00140_ch_G0000252;Parent=HG00140_ch_T0000803;transcript_name=HG00140_ch_T0000803;gene_name=ENSG00000295056;ID=intron:HG00140_ch_T0000803:1;Name=ENSG00000295056;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8647890	8648048	.	-	.	source_transcript=ENST00000727700.1;source_transcript_name=ENST00000727700;source_gene=ENSG00000295056.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295056.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000727700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000727700.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295056;alternative_source_transcripts=ENST00000727700.1,ENST00000727700.1;transcript_id=HG00140_ch_T0000803;gene_id=HG00140_ch_G0000252;Parent=HG00140_ch_T0000803;transcript_name=HG00140_ch_T0000803;gene_name=ENSG00000295056;ID=exon:HG00140_ch_T0000803:2;Name=ENSG00000295056;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8648049	8714484	.	-	.	source_transcript=ENST00000727700.1;source_transcript_name=ENST00000727700;source_gene=ENSG00000295056.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295056.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000727700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000727700.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295056;alternative_source_transcripts=ENST00000727700.1,ENST00000727700.1;transcript_id=HG00140_ch_T0000803;gene_id=HG00140_ch_G0000252;Parent=HG00140_ch_T0000803;transcript_name=HG00140_ch_T0000803;gene_name=ENSG00000295056;ID=intron:HG00140_ch_T0000803:2;Name=ENSG00000295056;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8714485	8714574	.	-	.	source_transcript=ENST00000727700.1;source_transcript_name=ENST00000727700;source_gene=ENSG00000295056.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295056.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000727700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000727700.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295056;alternative_source_transcripts=ENST00000727700.1,ENST00000727700.1;transcript_id=HG00140_ch_T0000803;gene_id=HG00140_ch_G0000252;Parent=HG00140_ch_T0000803;transcript_name=HG00140_ch_T0000803;gene_name=ENSG00000295056;ID=exon:HG00140_ch_T0000803:3;Name=ENSG00000295056;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	8725904	8726008	.	+	.	source_gene_common_name=RNU6-521P;source_gene=ENSG00000252472.1;alternative_source_transcripts=ENST00000516663.1,ENST00000516663.1;gene_id=HG00140_ch_G0000253;gene_biotype=snRNA;gene_name=RNU6-521P;gene_sources=liftoff;ID=HG00140_ch_G0000253;Name=RNU6-521P
HG00140_chrY	CAT	transcript	8725904	8726008	1000	+	.	source_transcript=ENST00000516663.1;source_transcript_name=RNU6-521P-201;source_gene=ENSG00000252472.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252472.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516663.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516663.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-521P;alternative_source_transcripts=ENST00000516663.1,ENST00000516663.1;transcript_id=HG00140_ch_T0000804;gene_id=HG00140_ch_G0000253;Parent=HG00140_ch_G0000253;transcript_name=HG00140_ch_T0000804;gene_name=RNU6-521P;ID=HG00140_ch_T0000804;Name=RNU6-521P
HG00140_chrY	CAT	exon	8725904	8726008	.	+	.	source_transcript=ENST00000516663.1;source_transcript_name=RNU6-521P-201;source_gene=ENSG00000252472.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252472.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516663.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516663.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-521P;alternative_source_transcripts=ENST00000516663.1,ENST00000516663.1;transcript_id=HG00140_ch_T0000804;gene_id=HG00140_ch_G0000253;Parent=HG00140_ch_T0000804;transcript_name=HG00140_ch_T0000804;gene_name=RNU6-521P;ID=exon:HG00140_ch_T0000804:0;Name=RNU6-521P;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	8767513	8875085	.	-	.	source_gene_common_name=PRKY;source_gene=ENSG00000293442.2;gene_id=HG00140_ch_G0000254;gene_biotype=lncRNA;gene_name=PRKY;gene_sources=liftoff;ID=HG00140_ch_G0000254;Name=PRKY
HG00140_chrY	CAT	transcript	8767513	8875085	1000	-	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000805;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_G0000254;transcript_name=HG00140_ch_T0000805;gene_name=PRKY;ID=HG00140_ch_T0000805;Name=PRKY
HG00140_chrY	CAT	exon	8767513	8773349	.	-	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000805;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000805;transcript_name=HG00140_ch_T0000805;gene_name=PRKY;ID=exon:HG00140_ch_T0000805:0;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8773350	8777171	.	-	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000805;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000805;transcript_name=HG00140_ch_T0000805;gene_name=PRKY;ID=intron:HG00140_ch_T0000805:0;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8777172	8777318	.	-	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000805;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000805;transcript_name=HG00140_ch_T0000805;gene_name=PRKY;ID=exon:HG00140_ch_T0000805:1;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8777319	8781627	.	-	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000805;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000805;transcript_name=HG00140_ch_T0000805;gene_name=PRKY;ID=intron:HG00140_ch_T0000805:1;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8781628	8781705	.	-	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000805;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000805;transcript_name=HG00140_ch_T0000805;gene_name=PRKY;ID=exon:HG00140_ch_T0000805:2;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8781706	8792830	.	-	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000805;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000805;transcript_name=HG00140_ch_T0000805;gene_name=PRKY;ID=intron:HG00140_ch_T0000805:2;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8792831	8792926	.	-	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000805;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000805;transcript_name=HG00140_ch_T0000805;gene_name=PRKY;ID=exon:HG00140_ch_T0000805:3;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8792927	8807825	.	-	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000805;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000805;transcript_name=HG00140_ch_T0000805;gene_name=PRKY;ID=intron:HG00140_ch_T0000805:3;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8807826	8807945	.	-	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000805;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000805;transcript_name=HG00140_ch_T0000805;gene_name=PRKY;ID=exon:HG00140_ch_T0000805:4;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8807946	8822888	.	-	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000805;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000805;transcript_name=HG00140_ch_T0000805;gene_name=PRKY;ID=intron:HG00140_ch_T0000805:4;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8822889	8823152	.	-	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000805;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000805;transcript_name=HG00140_ch_T0000805;gene_name=PRKY;ID=exon:HG00140_ch_T0000805:5;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8823153	8844954	.	-	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000805;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000805;transcript_name=HG00140_ch_T0000805;gene_name=PRKY;ID=intron:HG00140_ch_T0000805:5;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8844955	8845123	.	-	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000805;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000805;transcript_name=HG00140_ch_T0000805;gene_name=PRKY;ID=exon:HG00140_ch_T0000805:6;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8845124	8874578	.	-	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000805;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000805;transcript_name=HG00140_ch_T0000805;gene_name=PRKY;ID=intron:HG00140_ch_T0000805:6;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8874579	8875085	.	-	.	source_transcript=ENST00000528056.5;source_transcript_name=PRKY-204;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000528056.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000528056.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000805;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000805;transcript_name=HG00140_ch_T0000805;gene_name=PRKY;ID=exon:HG00140_ch_T0000805:7;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	8772634	8874095	1000	-	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000807;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_G0000254;transcript_name=HG00140_ch_T0000807;gene_name=PRKY;ID=HG00140_ch_T0000807;Name=PRKY
HG00140_chrY	CAT	exon	8772634	8773349	.	-	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000807;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000807;transcript_name=HG00140_ch_T0000807;gene_name=PRKY;ID=exon:HG00140_ch_T0000807:0;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8773350	8777171	.	-	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000807;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000807;transcript_name=HG00140_ch_T0000807;gene_name=PRKY;ID=intron:HG00140_ch_T0000807:0;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8777172	8777318	.	-	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000807;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000807;transcript_name=HG00140_ch_T0000807;gene_name=PRKY;ID=exon:HG00140_ch_T0000807:1;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8777319	8781627	.	-	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000807;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000807;transcript_name=HG00140_ch_T0000807;gene_name=PRKY;ID=intron:HG00140_ch_T0000807:1;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8781628	8781705	.	-	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000807;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000807;transcript_name=HG00140_ch_T0000807;gene_name=PRKY;ID=exon:HG00140_ch_T0000807:2;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8781706	8792830	.	-	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000807;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000807;transcript_name=HG00140_ch_T0000807;gene_name=PRKY;ID=intron:HG00140_ch_T0000807:2;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8792831	8792926	.	-	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000807;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000807;transcript_name=HG00140_ch_T0000807;gene_name=PRKY;ID=exon:HG00140_ch_T0000807:3;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8792927	8822888	.	-	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000807;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000807;transcript_name=HG00140_ch_T0000807;gene_name=PRKY;ID=intron:HG00140_ch_T0000807:3;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8822889	8823152	.	-	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000807;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000807;transcript_name=HG00140_ch_T0000807;gene_name=PRKY;ID=exon:HG00140_ch_T0000807:4;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8823153	8844954	.	-	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000807;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000807;transcript_name=HG00140_ch_T0000807;gene_name=PRKY;ID=intron:HG00140_ch_T0000807:4;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8844955	8845123	.	-	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000807;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000807;transcript_name=HG00140_ch_T0000807;gene_name=PRKY;ID=exon:HG00140_ch_T0000807:5;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8845124	8873991	.	-	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000807;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000807;transcript_name=HG00140_ch_T0000807;gene_name=PRKY;ID=intron:HG00140_ch_T0000807:5;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8873992	8874095	.	-	.	source_transcript=ENST00000836332.1;source_transcript_name=PRKY-206;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000807;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000807;transcript_name=HG00140_ch_T0000807;gene_name=PRKY;ID=exon:HG00140_ch_T0000807:6;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	8772961	8809041	1000	-	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000808;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_G0000254;transcript_name=HG00140_ch_T0000808;gene_name=PRKY;ID=HG00140_ch_T0000808;Name=PRKY
HG00140_chrY	CAT	exon	8772961	8773349	.	-	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000808;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000808;transcript_name=HG00140_ch_T0000808;gene_name=PRKY;ID=exon:HG00140_ch_T0000808:0;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8773350	8777171	.	-	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000808;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000808;transcript_name=HG00140_ch_T0000808;gene_name=PRKY;ID=intron:HG00140_ch_T0000808:0;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8777172	8777318	.	-	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000808;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000808;transcript_name=HG00140_ch_T0000808;gene_name=PRKY;ID=exon:HG00140_ch_T0000808:1;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8777319	8781627	.	-	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000808;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000808;transcript_name=HG00140_ch_T0000808;gene_name=PRKY;ID=intron:HG00140_ch_T0000808:1;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8781628	8781705	.	-	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000808;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000808;transcript_name=HG00140_ch_T0000808;gene_name=PRKY;ID=exon:HG00140_ch_T0000808:2;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8781706	8792830	.	-	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000808;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000808;transcript_name=HG00140_ch_T0000808;gene_name=PRKY;ID=intron:HG00140_ch_T0000808:2;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8792831	8792926	.	-	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000808;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000808;transcript_name=HG00140_ch_T0000808;gene_name=PRKY;ID=exon:HG00140_ch_T0000808:3;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8792927	8807825	.	-	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000808;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000808;transcript_name=HG00140_ch_T0000808;gene_name=PRKY;ID=intron:HG00140_ch_T0000808:3;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8807826	8807945	.	-	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000808;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000808;transcript_name=HG00140_ch_T0000808;gene_name=PRKY;ID=exon:HG00140_ch_T0000808:4;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8807946	8808895	.	-	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000808;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000808;transcript_name=HG00140_ch_T0000808;gene_name=PRKY;ID=intron:HG00140_ch_T0000808:4;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8808896	8809041	.	-	.	source_transcript=ENST00000836336.1;source_transcript_name=PRKY-210;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000808;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000808;transcript_name=HG00140_ch_T0000808;gene_name=PRKY;ID=exon:HG00140_ch_T0000808:5;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	8772962	8809100	1000	-	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000809;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_G0000254;transcript_name=HG00140_ch_T0000809;gene_name=PRKY;ID=HG00140_ch_T0000809;Name=PRKY
HG00140_chrY	CAT	exon	8772962	8773349	.	-	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000809;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000809;transcript_name=HG00140_ch_T0000809;gene_name=PRKY;ID=exon:HG00140_ch_T0000809:0;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8773350	8777171	.	-	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000809;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000809;transcript_name=HG00140_ch_T0000809;gene_name=PRKY;ID=intron:HG00140_ch_T0000809:0;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8777172	8777318	.	-	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000809;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000809;transcript_name=HG00140_ch_T0000809;gene_name=PRKY;ID=exon:HG00140_ch_T0000809:1;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8777319	8781627	.	-	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000809;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000809;transcript_name=HG00140_ch_T0000809;gene_name=PRKY;ID=intron:HG00140_ch_T0000809:1;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8781628	8781705	.	-	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000809;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000809;transcript_name=HG00140_ch_T0000809;gene_name=PRKY;ID=exon:HG00140_ch_T0000809:2;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8781706	8792830	.	-	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000809;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000809;transcript_name=HG00140_ch_T0000809;gene_name=PRKY;ID=intron:HG00140_ch_T0000809:2;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8792831	8792926	.	-	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000809;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000809;transcript_name=HG00140_ch_T0000809;gene_name=PRKY;ID=exon:HG00140_ch_T0000809:3;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8792927	8807825	.	-	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000809;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000809;transcript_name=HG00140_ch_T0000809;gene_name=PRKY;ID=intron:HG00140_ch_T0000809:3;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8807826	8807945	.	-	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000809;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000809;transcript_name=HG00140_ch_T0000809;gene_name=PRKY;ID=exon:HG00140_ch_T0000809:4;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8807946	8809037	.	-	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000809;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000809;transcript_name=HG00140_ch_T0000809;gene_name=PRKY;ID=intron:HG00140_ch_T0000809:4;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8809038	8809100	.	-	.	source_transcript=ENST00000836335.1;source_transcript_name=PRKY-209;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000809;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000809;transcript_name=HG00140_ch_T0000809;gene_name=PRKY;ID=exon:HG00140_ch_T0000809:5;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	8772962	8874231	1000	-	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000810;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_G0000254;transcript_name=HG00140_ch_T0000810;gene_name=PRKY;ID=HG00140_ch_T0000810;Name=PRKY
HG00140_chrY	CAT	exon	8772962	8773349	.	-	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000810;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000810;transcript_name=HG00140_ch_T0000810;gene_name=PRKY;ID=exon:HG00140_ch_T0000810:0;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8773350	8777171	.	-	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000810;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000810;transcript_name=HG00140_ch_T0000810;gene_name=PRKY;ID=intron:HG00140_ch_T0000810:0;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8777172	8777318	.	-	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000810;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000810;transcript_name=HG00140_ch_T0000810;gene_name=PRKY;ID=exon:HG00140_ch_T0000810:1;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8777319	8781627	.	-	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000810;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000810;transcript_name=HG00140_ch_T0000810;gene_name=PRKY;ID=intron:HG00140_ch_T0000810:1;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8781628	8781705	.	-	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000810;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000810;transcript_name=HG00140_ch_T0000810;gene_name=PRKY;ID=exon:HG00140_ch_T0000810:2;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8781706	8792830	.	-	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000810;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000810;transcript_name=HG00140_ch_T0000810;gene_name=PRKY;ID=intron:HG00140_ch_T0000810:2;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8792831	8792926	.	-	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000810;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000810;transcript_name=HG00140_ch_T0000810;gene_name=PRKY;ID=exon:HG00140_ch_T0000810:3;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8792927	8807825	.	-	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000810;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000810;transcript_name=HG00140_ch_T0000810;gene_name=PRKY;ID=intron:HG00140_ch_T0000810:3;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8807826	8807945	.	-	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000810;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000810;transcript_name=HG00140_ch_T0000810;gene_name=PRKY;ID=exon:HG00140_ch_T0000810:4;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8807946	8820909	.	-	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000810;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000810;transcript_name=HG00140_ch_T0000810;gene_name=PRKY;ID=intron:HG00140_ch_T0000810:4;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8820910	8821031	.	-	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000810;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000810;transcript_name=HG00140_ch_T0000810;gene_name=PRKY;ID=exon:HG00140_ch_T0000810:5;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8821032	8822888	.	-	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000810;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000810;transcript_name=HG00140_ch_T0000810;gene_name=PRKY;ID=intron:HG00140_ch_T0000810:5;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8822889	8823152	.	-	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000810;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000810;transcript_name=HG00140_ch_T0000810;gene_name=PRKY;ID=exon:HG00140_ch_T0000810:6;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8823153	8844954	.	-	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000810;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000810;transcript_name=HG00140_ch_T0000810;gene_name=PRKY;ID=intron:HG00140_ch_T0000810:6;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8844955	8845123	.	-	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000810;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000810;transcript_name=HG00140_ch_T0000810;gene_name=PRKY;ID=exon:HG00140_ch_T0000810:7;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8845124	8873991	.	-	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000810;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000810;transcript_name=HG00140_ch_T0000810;gene_name=PRKY;ID=intron:HG00140_ch_T0000810:7;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8873992	8874231	.	-	.	source_transcript=ENST00000836333.1;source_transcript_name=PRKY-207;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000810;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000810;transcript_name=HG00140_ch_T0000810;gene_name=PRKY;ID=exon:HG00140_ch_T0000810:8;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	8775946	8809099	1000	-	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000811;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_G0000254;transcript_name=HG00140_ch_T0000811;gene_name=PRKY;ID=HG00140_ch_T0000811;Name=PRKY
HG00140_chrY	CAT	exon	8775946	8776329	.	-	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000811;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000811;transcript_name=HG00140_ch_T0000811;gene_name=PRKY;ID=exon:HG00140_ch_T0000811:0;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8776330	8777171	.	-	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000811;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000811;transcript_name=HG00140_ch_T0000811;gene_name=PRKY;ID=intron:HG00140_ch_T0000811:0;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8777172	8777318	.	-	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000811;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000811;transcript_name=HG00140_ch_T0000811;gene_name=PRKY;ID=exon:HG00140_ch_T0000811:1;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8777319	8781627	.	-	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000811;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000811;transcript_name=HG00140_ch_T0000811;gene_name=PRKY;ID=intron:HG00140_ch_T0000811:1;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8781628	8781705	.	-	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000811;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000811;transcript_name=HG00140_ch_T0000811;gene_name=PRKY;ID=exon:HG00140_ch_T0000811:2;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8781706	8792830	.	-	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000811;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000811;transcript_name=HG00140_ch_T0000811;gene_name=PRKY;ID=intron:HG00140_ch_T0000811:2;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8792831	8792926	.	-	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000811;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000811;transcript_name=HG00140_ch_T0000811;gene_name=PRKY;ID=exon:HG00140_ch_T0000811:3;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8792927	8807825	.	-	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000811;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000811;transcript_name=HG00140_ch_T0000811;gene_name=PRKY;ID=intron:HG00140_ch_T0000811:3;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8807826	8807945	.	-	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000811;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000811;transcript_name=HG00140_ch_T0000811;gene_name=PRKY;ID=exon:HG00140_ch_T0000811:4;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8807946	8809037	.	-	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000811;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000811;transcript_name=HG00140_ch_T0000811;gene_name=PRKY;ID=intron:HG00140_ch_T0000811:4;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8809038	8809099	.	-	.	source_transcript=ENST00000836337.1;source_transcript_name=PRKY-211;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000811;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000811;transcript_name=HG00140_ch_T0000811;gene_name=PRKY;ID=exon:HG00140_ch_T0000811:5;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	8792838	8816028	1000	-	.	source_transcript=ENST00000472666.1;source_transcript_name=PRKY-202;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000472666.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000813;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_G0000254;transcript_name=HG00140_ch_T0000813;gene_name=PRKY;ID=HG00140_ch_T0000813;Name=PRKY
HG00140_chrY	CAT	exon	8792838	8792926	.	-	.	source_transcript=ENST00000472666.1;source_transcript_name=PRKY-202;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000472666.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000813;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000813;transcript_name=HG00140_ch_T0000813;gene_name=PRKY;ID=exon:HG00140_ch_T0000813:0;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8792927	8807825	.	-	.	source_transcript=ENST00000472666.1;source_transcript_name=PRKY-202;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000472666.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000813;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000813;transcript_name=HG00140_ch_T0000813;gene_name=PRKY;ID=intron:HG00140_ch_T0000813:0;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8807826	8807945	.	-	.	source_transcript=ENST00000472666.1;source_transcript_name=PRKY-202;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000472666.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000813;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000813;transcript_name=HG00140_ch_T0000813;gene_name=PRKY;ID=exon:HG00140_ch_T0000813:1;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8807946	8815949	.	-	.	source_transcript=ENST00000472666.1;source_transcript_name=PRKY-202;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000472666.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000813;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000813;transcript_name=HG00140_ch_T0000813;gene_name=PRKY;ID=intron:HG00140_ch_T0000813:1;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8815950	8816028	.	-	.	source_transcript=ENST00000472666.1;source_transcript_name=PRKY-202;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000472666.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000813;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000813;transcript_name=HG00140_ch_T0000813;gene_name=PRKY;ID=exon:HG00140_ch_T0000813:2;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	8806845	8874139	1000	-	.	source_transcript=ENST00000836334.1;source_transcript_name=PRKY-208;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836334.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000814;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_G0000254;transcript_name=HG00140_ch_T0000814;gene_name=PRKY;ID=HG00140_ch_T0000814;Name=PRKY
HG00140_chrY	CAT	exon	8806845	8807945	.	-	.	source_transcript=ENST00000836334.1;source_transcript_name=PRKY-208;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000814;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000814;transcript_name=HG00140_ch_T0000814;gene_name=PRKY;ID=exon:HG00140_ch_T0000814:0;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8807946	8822888	.	-	.	source_transcript=ENST00000836334.1;source_transcript_name=PRKY-208;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000814;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000814;transcript_name=HG00140_ch_T0000814;gene_name=PRKY;ID=intron:HG00140_ch_T0000814:0;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8822889	8823152	.	-	.	source_transcript=ENST00000836334.1;source_transcript_name=PRKY-208;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000814;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000814;transcript_name=HG00140_ch_T0000814;gene_name=PRKY;ID=exon:HG00140_ch_T0000814:1;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8823153	8844954	.	-	.	source_transcript=ENST00000836334.1;source_transcript_name=PRKY-208;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000814;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000814;transcript_name=HG00140_ch_T0000814;gene_name=PRKY;ID=intron:HG00140_ch_T0000814:1;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8844955	8845123	.	-	.	source_transcript=ENST00000836334.1;source_transcript_name=PRKY-208;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000814;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000814;transcript_name=HG00140_ch_T0000814;gene_name=PRKY;ID=exon:HG00140_ch_T0000814:2;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8845124	8873991	.	-	.	source_transcript=ENST00000836334.1;source_transcript_name=PRKY-208;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000814;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000814;transcript_name=HG00140_ch_T0000814;gene_name=PRKY;ID=intron:HG00140_ch_T0000814:2;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8873992	8874139	.	-	.	source_transcript=ENST00000836334.1;source_transcript_name=PRKY-208;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000814;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000814;transcript_name=HG00140_ch_T0000814;gene_name=PRKY;ID=exon:HG00140_ch_T0000814:3;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	8820655	8822991	1000	-	.	source_transcript=ENST00000495163.1;source_transcript_name=PRKY-203;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000495163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495163.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000816;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_G0000254;transcript_name=HG00140_ch_T0000816;gene_name=PRKY;ID=HG00140_ch_T0000816;Name=PRKY
HG00140_chrY	CAT	exon	8820655	8821031	.	-	.	source_transcript=ENST00000495163.1;source_transcript_name=PRKY-203;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000495163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000816;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000816;transcript_name=HG00140_ch_T0000816;gene_name=PRKY;ID=exon:HG00140_ch_T0000816:0;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8821032	8822888	.	-	.	source_transcript=ENST00000495163.1;source_transcript_name=PRKY-203;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000495163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000816;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000816;transcript_name=HG00140_ch_T0000816;gene_name=PRKY;ID=intron:HG00140_ch_T0000816:0;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8822889	8822991	.	-	.	source_transcript=ENST00000495163.1;source_transcript_name=PRKY-203;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000495163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000816;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000816;transcript_name=HG00140_ch_T0000816;gene_name=PRKY;ID=exon:HG00140_ch_T0000816:1;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	8858300	8874480	1000	-	.	source_transcript=ENST00000700775.2;source_transcript_name=PRKY-205;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700775.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700775.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000818;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_G0000254;transcript_name=HG00140_ch_T0000818;gene_name=PRKY;ID=HG00140_ch_T0000818;Name=PRKY
HG00140_chrY	CAT	exon	8858300	8858542	.	-	.	source_transcript=ENST00000700775.2;source_transcript_name=PRKY-205;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700775.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700775.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000818;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000818;transcript_name=HG00140_ch_T0000818;gene_name=PRKY;ID=exon:HG00140_ch_T0000818:0;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8858543	8873991	.	-	.	source_transcript=ENST00000700775.2;source_transcript_name=PRKY-205;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700775.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700775.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000818;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000818;transcript_name=HG00140_ch_T0000818;gene_name=PRKY;ID=intron:HG00140_ch_T0000818:0;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8873992	8874480	.	-	.	source_transcript=ENST00000700775.2;source_transcript_name=PRKY-205;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700775.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700775.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000818;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000818;transcript_name=HG00140_ch_T0000818;gene_name=PRKY;ID=exon:HG00140_ch_T0000818:1;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	8858300	8874283	1000	-	.	source_transcript=ENST00000836384.1;source_transcript_name=PRKY-212;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836384.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836384.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000819;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_G0000254;transcript_name=HG00140_ch_T0000819;gene_name=PRKY;ID=HG00140_ch_T0000819;Name=PRKY
HG00140_chrY	CAT	exon	8858300	8858542	.	-	.	source_transcript=ENST00000836384.1;source_transcript_name=PRKY-212;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836384.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836384.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000819;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000819;transcript_name=HG00140_ch_T0000819;gene_name=PRKY;ID=exon:HG00140_ch_T0000819:0;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8858543	8863937	.	-	.	source_transcript=ENST00000836384.1;source_transcript_name=PRKY-212;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836384.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836384.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000819;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000819;transcript_name=HG00140_ch_T0000819;gene_name=PRKY;ID=intron:HG00140_ch_T0000819:0;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8863938	8864029	.	-	.	source_transcript=ENST00000836384.1;source_transcript_name=PRKY-212;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836384.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836384.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000819;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000819;transcript_name=HG00140_ch_T0000819;gene_name=PRKY;ID=exon:HG00140_ch_T0000819:1;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8864030	8873991	.	-	.	source_transcript=ENST00000836384.1;source_transcript_name=PRKY-212;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836384.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836384.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000819;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000819;transcript_name=HG00140_ch_T0000819;gene_name=PRKY;ID=intron:HG00140_ch_T0000819:1;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8873992	8874283	.	-	.	source_transcript=ENST00000836384.1;source_transcript_name=PRKY-212;source_gene=ENSG00000293442.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293442.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000836384.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000836384.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000819;gene_id=HG00140_ch_G0000254;Parent=HG00140_ch_T0000819;transcript_name=HG00140_ch_T0000819;gene_name=PRKY;ID=exon:HG00140_ch_T0000819:2;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	8770282	8770389	.	-	.	source_gene_common_name=RNU6-941P;source_gene=ENSG00000252155.1;gene_id=HG00140_ch_G0000255;gene_biotype=snRNA;gene_name=RNU6-941P;gene_sources=liftoff;ID=HG00140_ch_G0000255;Name=RNU6-941P
HG00140_chrY	CAT	transcript	8770282	8770389	1000	-	.	source_transcript=ENST00000516346.1;source_transcript_name=RNU6-941P-201;source_gene=ENSG00000252155.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252155.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516346.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-941P;transcript_id=HG00140_ch_T0000806;gene_id=HG00140_ch_G0000255;Parent=HG00140_ch_G0000255;transcript_name=HG00140_ch_T0000806;gene_name=RNU6-941P;ID=HG00140_ch_T0000806;Name=RNU6-941P
HG00140_chrY	CAT	exon	8770282	8770389	.	-	.	source_transcript=ENST00000516346.1;source_transcript_name=RNU6-941P-201;source_gene=ENSG00000252155.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252155.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-941P;transcript_id=HG00140_ch_T0000806;gene_id=HG00140_ch_G0000255;Parent=HG00140_ch_T0000806;transcript_name=HG00140_ch_T0000806;gene_name=RNU6-941P;ID=exon:HG00140_ch_T0000806:0;Name=RNU6-941P;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	8777193	8874744	.	-	.	source_gene_common_name=PRKY;source_gene=ENSG00000099725.15;gene_id=HG00140_ch_G0000256;gene_biotype=transcribed_unitary_pseudogene;gene_name=PRKY;gene_sources=liftoff;ID=HG00140_ch_G0000256;Name=PRKY
HG00140_chrY	CAT	transcript	8777193	8874744	1000	-	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000812;gene_id=HG00140_ch_G0000256;Parent=HG00140_ch_G0000256;transcript_name=HG00140_ch_T0000812;gene_name=PRKY;ID=HG00140_ch_T0000812;Name=PRKY
HG00140_chrY	CAT	exon	8777193	8777318	.	-	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000812;gene_id=HG00140_ch_G0000256;Parent=HG00140_ch_T0000812;transcript_name=HG00140_ch_T0000812;gene_name=PRKY;ID=exon:HG00140_ch_T0000812:0;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8777319	8781627	.	-	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000812;gene_id=HG00140_ch_G0000256;Parent=HG00140_ch_T0000812;transcript_name=HG00140_ch_T0000812;gene_name=PRKY;ID=intron:HG00140_ch_T0000812:0;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8781628	8781705	.	-	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000812;gene_id=HG00140_ch_G0000256;Parent=HG00140_ch_T0000812;transcript_name=HG00140_ch_T0000812;gene_name=PRKY;ID=exon:HG00140_ch_T0000812:1;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8781706	8792830	.	-	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000812;gene_id=HG00140_ch_G0000256;Parent=HG00140_ch_T0000812;transcript_name=HG00140_ch_T0000812;gene_name=PRKY;ID=intron:HG00140_ch_T0000812:1;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8792831	8792926	.	-	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000812;gene_id=HG00140_ch_G0000256;Parent=HG00140_ch_T0000812;transcript_name=HG00140_ch_T0000812;gene_name=PRKY;ID=exon:HG00140_ch_T0000812:2;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8792927	8807825	.	-	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000812;gene_id=HG00140_ch_G0000256;Parent=HG00140_ch_T0000812;transcript_name=HG00140_ch_T0000812;gene_name=PRKY;ID=intron:HG00140_ch_T0000812:2;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8807826	8807945	.	-	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000812;gene_id=HG00140_ch_G0000256;Parent=HG00140_ch_T0000812;transcript_name=HG00140_ch_T0000812;gene_name=PRKY;ID=exon:HG00140_ch_T0000812:3;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8807946	8822888	.	-	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000812;gene_id=HG00140_ch_G0000256;Parent=HG00140_ch_T0000812;transcript_name=HG00140_ch_T0000812;gene_name=PRKY;ID=intron:HG00140_ch_T0000812:3;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8822889	8823152	.	-	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000812;gene_id=HG00140_ch_G0000256;Parent=HG00140_ch_T0000812;transcript_name=HG00140_ch_T0000812;gene_name=PRKY;ID=exon:HG00140_ch_T0000812:4;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8823153	8844954	.	-	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000812;gene_id=HG00140_ch_G0000256;Parent=HG00140_ch_T0000812;transcript_name=HG00140_ch_T0000812;gene_name=PRKY;ID=intron:HG00140_ch_T0000812:4;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8844955	8845123	.	-	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000812;gene_id=HG00140_ch_G0000256;Parent=HG00140_ch_T0000812;transcript_name=HG00140_ch_T0000812;gene_name=PRKY;ID=exon:HG00140_ch_T0000812:5;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8845124	8874578	.	-	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000812;gene_id=HG00140_ch_G0000256;Parent=HG00140_ch_T0000812;transcript_name=HG00140_ch_T0000812;gene_name=PRKY;ID=intron:HG00140_ch_T0000812:5;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	8874579	8874744	.	-	.	source_transcript=ENST00000533551.5;source_transcript_name=PRKY-201;source_gene=ENSG00000099725.15;source_gene_biotype=transcribed_unitary_pseudogene;original_gene_id=ENSG00000099725.15;gene_biotype=transcribed_unitary_pseudogene;transcript_biotype=transcribed_unitary_pseudogene;alignment_id=ENST00000533551.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000533551.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;transcript_id=HG00140_ch_T0000812;gene_id=HG00140_ch_G0000256;Parent=HG00140_ch_T0000812;transcript_name=HG00140_ch_T0000812;gene_name=PRKY;ID=exon:HG00140_ch_T0000812:6;Name=PRKY;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	8807418	8807529	.	-	.	source_gene_common_name=Y_RNA;source_gene=ENSG00000251996.1;gene_id=HG00140_ch_G0000257;gene_biotype=misc_RNA;gene_name=Y_RNA;gene_sources=liftoff;ID=HG00140_ch_G0000257;Name=Y_RNA
HG00140_chrY	CAT	transcript	8807418	8807529	1000	-	.	source_transcript=ENST00000516187.1;source_transcript_name=Y_RNA.666-201;source_gene=ENSG00000251996.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000251996.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000516187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516187.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=Y_RNA;transcript_id=HG00140_ch_T0000815;gene_id=HG00140_ch_G0000257;Parent=HG00140_ch_G0000257;transcript_name=HG00140_ch_T0000815;gene_name=Y_RNA;ID=HG00140_ch_T0000815;Name=Y_RNA
HG00140_chrY	CAT	exon	8807418	8807529	.	-	.	source_transcript=ENST00000516187.1;source_transcript_name=Y_RNA.666-201;source_gene=ENSG00000251996.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000251996.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000516187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=Y_RNA;transcript_id=HG00140_ch_T0000815;gene_id=HG00140_ch_G0000257;Parent=HG00140_ch_T0000815;transcript_name=HG00140_ch_T0000815;gene_name=Y_RNA;ID=exon:HG00140_ch_T0000815:0;Name=Y_RNA;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	8824463	8824761	.	+	.	source_gene_common_name=RN7SKP282;source_gene=ENSG00000252633.1;alternative_source_transcripts=ENST00000516824.1,ENST00000516824.1;gene_id=HG00140_ch_G0000258;gene_biotype=misc_RNA;gene_name=RN7SKP282;gene_sources=liftoff;ID=HG00140_ch_G0000258;Name=RN7SKP282
HG00140_chrY	CAT	transcript	8824463	8824761	1000	+	.	source_transcript=ENST00000516824.1;source_transcript_name=RN7SKP282-201;source_gene=ENSG00000252633.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000252633.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000516824.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516824.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RN7SKP282;alternative_source_transcripts=ENST00000516824.1,ENST00000516824.1;transcript_id=HG00140_ch_T0000817;gene_id=HG00140_ch_G0000258;Parent=HG00140_ch_G0000258;transcript_name=HG00140_ch_T0000817;gene_name=RN7SKP282;ID=HG00140_ch_T0000817;Name=RN7SKP282
HG00140_chrY	CAT	exon	8824463	8824761	.	+	.	source_transcript=ENST00000516824.1;source_transcript_name=RN7SKP282-201;source_gene=ENSG00000252633.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000252633.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000516824.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516824.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RN7SKP282;alternative_source_transcripts=ENST00000516824.1,ENST00000516824.1;transcript_id=HG00140_ch_T0000817;gene_id=HG00140_ch_G0000258;Parent=HG00140_ch_T0000817;transcript_name=HG00140_ch_T0000817;gene_name=RN7SKP282;ID=exon:HG00140_ch_T0000817:0;Name=RN7SKP282;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	8971243	9048984	.	+	.	source_gene_common_name=ENSG00000309393;source_gene=ENSG00000309393.1;gene_id=HG00140_ch_G0000259;gene_biotype=lncRNA;gene_name=ENSG00000309393;gene_sources=liftoff;ID=HG00140_ch_G0000259;Name=ENSG00000309393
HG00140_chrY	CAT	transcript	8971243	9048984	1000	+	.	source_transcript=ENST00000840710.1;source_transcript_name=ENST00000840710;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840710.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=HG00140_ch_T0000820;gene_id=HG00140_ch_G0000259;Parent=HG00140_ch_G0000259;transcript_name=HG00140_ch_T0000820;gene_name=ENSG00000309393;ID=HG00140_ch_T0000820;Name=ENSG00000309393
HG00140_chrY	CAT	exon	8971243	8971395	.	+	.	source_transcript=ENST00000840710.1;source_transcript_name=ENST00000840710;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=HG00140_ch_T0000820;gene_id=HG00140_ch_G0000259;Parent=HG00140_ch_T0000820;transcript_name=HG00140_ch_T0000820;gene_name=ENSG00000309393;ID=exon:HG00140_ch_T0000820:0;Name=ENSG00000309393;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8971396	9048225	.	+	.	source_transcript=ENST00000840710.1;source_transcript_name=ENST00000840710;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=HG00140_ch_T0000820;gene_id=HG00140_ch_G0000259;Parent=HG00140_ch_T0000820;transcript_name=HG00140_ch_T0000820;gene_name=ENSG00000309393;ID=intron:HG00140_ch_T0000820:0;Name=ENSG00000309393;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9048226	9048984	.	+	.	source_transcript=ENST00000840710.1;source_transcript_name=ENST00000840710;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=HG00140_ch_T0000820;gene_id=HG00140_ch_G0000259;Parent=HG00140_ch_T0000820;transcript_name=HG00140_ch_T0000820;gene_name=ENSG00000309393;ID=exon:HG00140_ch_T0000820:1;Name=ENSG00000309393;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	8971253	9048657	1000	+	.	source_transcript=ENST00000840711.1;source_transcript_name=ENST00000840711;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840711.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=HG00140_ch_T0000821;gene_id=HG00140_ch_G0000259;Parent=HG00140_ch_G0000259;transcript_name=HG00140_ch_T0000821;gene_name=ENSG00000309393;ID=HG00140_ch_T0000821;Name=ENSG00000309393
HG00140_chrY	CAT	exon	8971253	8971355	.	+	.	source_transcript=ENST00000840711.1;source_transcript_name=ENST00000840711;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=HG00140_ch_T0000821;gene_id=HG00140_ch_G0000259;Parent=HG00140_ch_T0000821;transcript_name=HG00140_ch_T0000821;gene_name=ENSG00000309393;ID=exon:HG00140_ch_T0000821:0;Name=ENSG00000309393;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	8971356	9048225	.	+	.	source_transcript=ENST00000840711.1;source_transcript_name=ENST00000840711;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=HG00140_ch_T0000821;gene_id=HG00140_ch_G0000259;Parent=HG00140_ch_T0000821;transcript_name=HG00140_ch_T0000821;gene_name=ENSG00000309393;ID=intron:HG00140_ch_T0000821:0;Name=ENSG00000309393;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9048226	9048657	.	+	.	source_transcript=ENST00000840711.1;source_transcript_name=ENST00000840711;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=HG00140_ch_T0000821;gene_id=HG00140_ch_G0000259;Parent=HG00140_ch_T0000821;transcript_name=HG00140_ch_T0000821;gene_name=ENSG00000309393;ID=exon:HG00140_ch_T0000821:1;Name=ENSG00000309393;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9042332	9048656	1000	+	.	source_transcript=ENST00000840712.1;source_transcript_name=ENST00000840712;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840712.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=HG00140_ch_T0000822;gene_id=HG00140_ch_G0000259;Parent=HG00140_ch_G0000259;transcript_name=HG00140_ch_T0000822;gene_name=ENSG00000309393;ID=HG00140_ch_T0000822;Name=ENSG00000309393
HG00140_chrY	CAT	exon	9042332	9042496	.	+	.	source_transcript=ENST00000840712.1;source_transcript_name=ENST00000840712;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=HG00140_ch_T0000822;gene_id=HG00140_ch_G0000259;Parent=HG00140_ch_T0000822;transcript_name=HG00140_ch_T0000822;gene_name=ENSG00000309393;ID=exon:HG00140_ch_T0000822:0;Name=ENSG00000309393;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9042497	9048225	.	+	.	source_transcript=ENST00000840712.1;source_transcript_name=ENST00000840712;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=HG00140_ch_T0000822;gene_id=HG00140_ch_G0000259;Parent=HG00140_ch_T0000822;transcript_name=HG00140_ch_T0000822;gene_name=ENSG00000309393;ID=intron:HG00140_ch_T0000822:0;Name=ENSG00000309393;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9048226	9048656	.	+	.	source_transcript=ENST00000840712.1;source_transcript_name=ENST00000840712;source_gene=ENSG00000309393.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309393.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309393;transcript_id=HG00140_ch_T0000822;gene_id=HG00140_ch_G0000259;Parent=HG00140_ch_T0000822;transcript_name=HG00140_ch_T0000822;gene_name=ENSG00000309393;ID=exon:HG00140_ch_T0000822:1;Name=ENSG00000309393;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	9042551	9048320	.	+	.	source_gene_common_name=GPR143YP;source_gene=ENSG00000232583.1;gene_id=HG00140_ch_G0000260;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=GPR143YP;gene_sources=liftoff;ID=HG00140_ch_G0000260;Name=GPR143YP
HG00140_chrY	CAT	transcript	9042551	9048320	1000	+	.	source_transcript=ENST00000434155.1;source_transcript_name=GPR143YP-201;source_gene=ENSG00000232583.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232583.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434155.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GPR143YP;transcript_id=HG00140_ch_T0000823;gene_id=HG00140_ch_G0000260;Parent=HG00140_ch_G0000260;transcript_name=HG00140_ch_T0000823;gene_name=GPR143YP;ID=HG00140_ch_T0000823;Name=GPR143YP
HG00140_chrY	CAT	exon	9042551	9042660	.	+	.	source_transcript=ENST00000434155.1;source_transcript_name=GPR143YP-201;source_gene=ENSG00000232583.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232583.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GPR143YP;transcript_id=HG00140_ch_T0000823;gene_id=HG00140_ch_G0000260;Parent=HG00140_ch_T0000823;transcript_name=HG00140_ch_T0000823;gene_name=GPR143YP;ID=exon:HG00140_ch_T0000823:0;Name=GPR143YP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9042661	9048225	.	+	.	source_transcript=ENST00000434155.1;source_transcript_name=GPR143YP-201;source_gene=ENSG00000232583.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232583.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GPR143YP;transcript_id=HG00140_ch_T0000823;gene_id=HG00140_ch_G0000260;Parent=HG00140_ch_T0000823;transcript_name=HG00140_ch_T0000823;gene_name=GPR143YP;ID=intron:HG00140_ch_T0000823:0;Name=GPR143YP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9048226	9048320	.	+	.	source_transcript=ENST00000434155.1;source_transcript_name=GPR143YP-201;source_gene=ENSG00000232583.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232583.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434155.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GPR143YP;transcript_id=HG00140_ch_T0000823;gene_id=HG00140_ch_G0000260;Parent=HG00140_ch_T0000823;transcript_name=HG00140_ch_T0000823;gene_name=GPR143YP;ID=exon:HG00140_ch_T0000823:1;Name=GPR143YP;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	9047083	9238349	.	-	.	source_gene_common_name=TBL1Y;source_gene=ENSG00000092377.15;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;gene_id=HG00140_ch_G0000261;gene_biotype=protein_coding;gene_name=TBL1Y;gene_sources=liftoff;ID=HG00140_ch_G0000261;Name=TBL1Y
HG00140_chrY	CAT	transcript	9047083	9062672	100	-	.	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=HG00140_ch_T0000824;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_G0000261;transcript_name=HG00140_ch_T0000824;gene_name=TBL1Y;ID=HG00140_ch_T0000824;Name=TBL1Y
HG00140_chrY	CAT	exon	9047083	9047234	.	-	.	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=HG00140_ch_T0000824;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000824;transcript_name=HG00140_ch_T0000824;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000824:0;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9047187	9047234	.	-	0	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=HG00140_ch_T0000824;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000824;transcript_name=HG00140_ch_T0000824;gene_name=TBL1Y;ID=CDS:HG00140_ch_T0000824:0;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	9047187	9047189	.	-	0	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=HG00140_ch_T0000824;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000824;transcript_name=HG00140_ch_T0000824;gene_name=TBL1Y;ID=stop_codon:HG00140_ch_T0000824;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9047235	9048202	.	-	.	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=HG00140_ch_T0000824;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000824;transcript_name=HG00140_ch_T0000824;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000824:0;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9048203	9048268	.	-	.	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=HG00140_ch_T0000824;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000824;transcript_name=HG00140_ch_T0000824;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000824:1;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9048203	9048268	.	-	0	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=HG00140_ch_T0000824;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000824;transcript_name=HG00140_ch_T0000824;gene_name=TBL1Y;ID=CDS:HG00140_ch_T0000824:1;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9048269	9058862	.	-	.	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=HG00140_ch_T0000824;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000824;transcript_name=HG00140_ch_T0000824;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000824:1;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9058863	9058964	.	-	.	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=HG00140_ch_T0000824;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000824;transcript_name=HG00140_ch_T0000824;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000824:2;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9058863	9058964	.	-	0	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=HG00140_ch_T0000824;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000824;transcript_name=HG00140_ch_T0000824;gene_name=TBL1Y;ID=CDS:HG00140_ch_T0000824:2;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9058965	9061620	.	-	.	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=HG00140_ch_T0000824;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000824;transcript_name=HG00140_ch_T0000824;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000824:2;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9061621	9061786	.	-	.	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=HG00140_ch_T0000824;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000824;transcript_name=HG00140_ch_T0000824;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000824:3;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9061621	9061786	.	-	1	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=HG00140_ch_T0000824;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000824;transcript_name=HG00140_ch_T0000824;gene_name=TBL1Y;ID=CDS:HG00140_ch_T0000824:3;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9061787	9062635	.	-	.	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=HG00140_ch_T0000824;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000824;transcript_name=HG00140_ch_T0000824;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000824:3;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9062636	9062672	.	-	.	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=HG00140_ch_T0000824;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000824;transcript_name=HG00140_ch_T0000824;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000824:4;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9062636	9062672	.	-	2	source_transcript=ENST00000651523.1;source_transcript_name=TBL1Y-204;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651523.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000651523.1,ENST00000651523.1;transcript_id=HG00140_ch_T0000824;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000824;transcript_name=HG00140_ch_T0000824;gene_name=TBL1Y;ID=CDS:HG00140_ch_T0000824:4;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9057370	9238349	100	-	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_G0000261;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=HG00140_ch_T0000825;Name=TBL1Y
HG00140_chrY	CAT	exon	9057370	9057581	.	-	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000825;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000825:0;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9057561	9057581	.	-	0	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000825;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=CDS:HG00140_ch_T0000825:0;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	9057561	9057563	.	-	0	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000825;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=stop_codon:HG00140_ch_T0000825;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9057582	9058862	.	-	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000825;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000825:0;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9058863	9058964	.	-	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000825;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000825:1;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9058863	9058964	.	-	0	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000825;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=CDS:HG00140_ch_T0000825:1;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9058965	9061620	.	-	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000825;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000825:1;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9061621	9061786	.	-	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000825;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000825:2;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9061621	9061786	.	-	1	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000825;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=CDS:HG00140_ch_T0000825:2;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9061787	9062635	.	-	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000825;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000825:2;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9062636	9062763	.	-	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000825;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000825:3;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9062636	9062763	.	-	0	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000825;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=CDS:HG00140_ch_T0000825:3;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9062764	9063080	.	-	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000825;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000825:3;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9063081	9063155	.	-	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000825;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000825:4;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9063081	9063155	.	-	0	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000825;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=CDS:HG00140_ch_T0000825:4;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9063156	9068197	.	-	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000825;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000825:4;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9068198	9068319	.	-	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000825;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000825:5;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9068198	9068319	.	-	2	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000825;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=CDS:HG00140_ch_T0000825:5;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9068320	9074429	.	-	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000825;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000825:5;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9074430	9074490	.	-	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000825;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000825:6;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9074430	9074490	.	-	0	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000825;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=CDS:HG00140_ch_T0000825:6;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9074491	9077219	.	-	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000825;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000825:6;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9077220	9077317	.	-	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000825;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000825:7;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9077220	9077317	.	-	2	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000825;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=CDS:HG00140_ch_T0000825:7;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9077318	9077426	.	-	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000825;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000825:7;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9077427	9077490	.	-	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000825;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000825:8;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9077427	9077490	.	-	0	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000825;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=CDS:HG00140_ch_T0000825:8;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9077491	9078188	.	-	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000825;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000825:8;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9078189	9078330	.	-	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000825;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000825:9;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9078189	9078330	.	-	1	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000825;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=CDS:HG00140_ch_T0000825:9;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9078331	9078721	.	-	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000825;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000825:9;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9078722	9078854	.	-	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000825;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000825:10;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9078722	9078854	.	-	2	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000825;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=CDS:HG00140_ch_T0000825:10;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9078855	9084900	.	-	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000825;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000825:10;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9084901	9085153	.	-	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000825;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000825:11;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9084901	9085153	.	-	0	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000825;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=CDS:HG00140_ch_T0000825:11;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9085154	9105903	.	-	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000825;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000825:11;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9105904	9106049	.	-	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000825;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000825:12;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9105904	9106049	.	-	2	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000825;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=CDS:HG00140_ch_T0000825:12;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9106050	9123885	.	-	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000825;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000825:12;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9123886	9123993	.	-	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000825;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000825:13;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9123886	9123943	.	-	0	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000825;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=CDS:HG00140_ch_T0000825:13;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	9123941	9123943	.	-	0	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000825;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=start_codon:HG00140_ch_T0000825;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9123994	9127490	.	-	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000825;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000825:13;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9127491	9127579	.	-	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000825;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000825:14;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9127580	9170791	.	-	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000825;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000825:14;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9170792	9170822	.	-	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000825;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000825:15;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9170823	9236862	.	-	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000825;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000825:15;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9236863	9236947	.	-	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000825;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000825:16;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9236948	9238052	.	-	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000825;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000825:16;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9238053	9238349	.	-	.	source_transcript=ENST00000346432.3;source_transcript_name=TBL1Y-201;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000346432.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000346432.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000346432.3,ENST00000346432.3;transcript_id=HG00140_ch_T0000825;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000825;transcript_name=HG00140_ch_T0000825;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000825:17;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9057370	9238349	100	-	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_G0000261;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=HG00140_ch_T0000826;Name=TBL1Y
HG00140_chrY	CAT	exon	9057370	9057581	.	-	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000826;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000826:0;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9057561	9057581	.	-	0	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000826;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=CDS:HG00140_ch_T0000826:0;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	9057561	9057563	.	-	0	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000826;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=stop_codon:HG00140_ch_T0000826;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9057582	9058862	.	-	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000826;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000826:0;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9058863	9058964	.	-	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000826;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000826:1;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9058863	9058964	.	-	0	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000826;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=CDS:HG00140_ch_T0000826:1;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9058965	9061620	.	-	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000826;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000826:1;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9061621	9061786	.	-	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000826;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000826:2;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9061621	9061786	.	-	1	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000826;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=CDS:HG00140_ch_T0000826:2;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9061787	9062635	.	-	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000826;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000826:2;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9062636	9062763	.	-	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000826;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000826:3;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9062636	9062763	.	-	0	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000826;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=CDS:HG00140_ch_T0000826:3;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9062764	9063080	.	-	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000826;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000826:3;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9063081	9063155	.	-	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000826;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000826:4;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9063081	9063155	.	-	0	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000826;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=CDS:HG00140_ch_T0000826:4;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9063156	9068197	.	-	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000826;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000826:4;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9068198	9068319	.	-	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000826;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000826:5;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9068198	9068319	.	-	2	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000826;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=CDS:HG00140_ch_T0000826:5;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9068320	9074429	.	-	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000826;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000826:5;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9074430	9074490	.	-	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000826;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000826:6;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9074430	9074490	.	-	0	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000826;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=CDS:HG00140_ch_T0000826:6;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9074491	9077219	.	-	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000826;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000826:6;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9077220	9077317	.	-	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000826;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000826:7;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9077220	9077317	.	-	2	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000826;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=CDS:HG00140_ch_T0000826:7;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9077318	9077426	.	-	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000826;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000826:7;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9077427	9077490	.	-	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000826;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000826:8;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9077427	9077490	.	-	0	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000826;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=CDS:HG00140_ch_T0000826:8;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9077491	9078188	.	-	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000826;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000826:8;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9078189	9078330	.	-	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000826;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000826:9;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9078189	9078330	.	-	1	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000826;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=CDS:HG00140_ch_T0000826:9;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9078331	9078721	.	-	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000826;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000826:9;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9078722	9078854	.	-	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000826;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000826:10;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9078722	9078854	.	-	2	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000826;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=CDS:HG00140_ch_T0000826:10;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9078855	9084900	.	-	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000826;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000826:10;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9084901	9085153	.	-	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000826;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000826:11;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9084901	9085153	.	-	0	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000826;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=CDS:HG00140_ch_T0000826:11;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9085154	9105903	.	-	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000826;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000826:11;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9105904	9106049	.	-	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000826;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000826:12;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9105904	9106049	.	-	2	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000826;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=CDS:HG00140_ch_T0000826:12;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9106050	9123885	.	-	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000826;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000826:12;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9123886	9123993	.	-	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000826;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000826:13;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9123886	9123943	.	-	0	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000826;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=CDS:HG00140_ch_T0000826:13;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	9123941	9123943	.	-	0	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000826;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=start_codon:HG00140_ch_T0000826;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9123994	9127490	.	-	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000826;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000826:13;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9127491	9127579	.	-	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000826;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000826:14;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9127580	9153128	.	-	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000826;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000826:14;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9153129	9153223	.	-	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000826;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000826:15;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9153224	9236862	.	-	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000826;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000826:15;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9236863	9236947	.	-	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000826;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000826:16;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9236948	9238052	.	-	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000826;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000826:16;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9238053	9238349	.	-	.	source_transcript=ENST00000355162.6;source_transcript_name=TBL1Y-202;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355162.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355162.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000355162.6,ENST00000355162.6;transcript_id=HG00140_ch_T0000826;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000826;transcript_name=HG00140_ch_T0000826;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000826:17;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9057370	9238338	100	-	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_G0000261;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=HG00140_ch_T0000827;Name=TBL1Y
HG00140_chrY	CAT	exon	9057370	9057581	.	-	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000827:0;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9057561	9057581	.	-	0	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=CDS:HG00140_ch_T0000827:0;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	9057561	9057563	.	-	0	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=stop_codon:HG00140_ch_T0000827;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9057582	9058862	.	-	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000827:0;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9058863	9058964	.	-	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000827:1;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9058863	9058964	.	-	0	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=CDS:HG00140_ch_T0000827:1;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9058965	9061620	.	-	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000827:1;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9061621	9061786	.	-	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000827:2;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9061621	9061786	.	-	1	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=CDS:HG00140_ch_T0000827:2;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9061787	9062635	.	-	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000827:2;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9062636	9062763	.	-	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000827:3;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9062636	9062763	.	-	0	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=CDS:HG00140_ch_T0000827:3;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9062764	9063080	.	-	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000827:3;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9063081	9063155	.	-	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000827:4;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9063081	9063155	.	-	0	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=CDS:HG00140_ch_T0000827:4;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9063156	9068197	.	-	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000827:4;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9068198	9068319	.	-	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000827:5;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9068198	9068319	.	-	2	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=CDS:HG00140_ch_T0000827:5;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9068320	9074429	.	-	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000827:5;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9074430	9074490	.	-	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000827:6;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9074430	9074490	.	-	0	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=CDS:HG00140_ch_T0000827:6;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9074491	9077219	.	-	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000827:6;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9077220	9077317	.	-	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000827:7;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9077220	9077317	.	-	2	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=CDS:HG00140_ch_T0000827:7;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9077318	9077426	.	-	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000827:7;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9077427	9077490	.	-	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000827:8;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9077427	9077490	.	-	0	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=CDS:HG00140_ch_T0000827:8;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9077491	9078188	.	-	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000827:8;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9078189	9078330	.	-	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000827:9;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9078189	9078330	.	-	1	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=CDS:HG00140_ch_T0000827:9;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9078331	9078721	.	-	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000827:9;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9078722	9078854	.	-	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000827:10;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9078722	9078854	.	-	2	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=CDS:HG00140_ch_T0000827:10;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9078855	9084900	.	-	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000827:10;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9084901	9085153	.	-	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000827:11;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9084901	9085153	.	-	0	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=CDS:HG00140_ch_T0000827:11;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9085154	9105903	.	-	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000827:11;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9105904	9106049	.	-	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000827:12;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9105904	9106049	.	-	2	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=CDS:HG00140_ch_T0000827:12;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9106050	9123885	.	-	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000827:12;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9123886	9123993	.	-	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000827:13;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9123886	9123943	.	-	0	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=CDS:HG00140_ch_T0000827:13;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	9123941	9123943	.	-	0	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=start_codon:HG00140_ch_T0000827;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9123994	9127490	.	-	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000827:13;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9127491	9127579	.	-	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000827:14;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9127580	9153128	.	-	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000827:14;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9153129	9153223	.	-	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000827:15;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9153224	9170791	.	-	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000827:15;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9170792	9170822	.	-	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000827:16;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9170823	9236862	.	-	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000827:16;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9236863	9236947	.	-	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000827:17;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9236948	9238052	.	-	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=intron:HG00140_ch_T0000827:17;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9238053	9238338	.	-	.	source_transcript=ENST00000383032.6;source_transcript_name=TBL1Y-203;source_gene=ENSG00000092377.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000092377.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383032.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000383032.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=ENST00000383032.6,ENST00000383032.6;transcript_id=HG00140_ch_T0000827;gene_id=HG00140_ch_G0000261;Parent=HG00140_ch_T0000827;transcript_name=HG00140_ch_T0000827;gene_name=TBL1Y;ID=exon:HG00140_ch_T0000827:18;Name=TBL1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	9228244	9230353	.	-	.	source_gene_common_name=ENSG00000273906;source_gene=ENSG00000273906.1;alternative_source_transcripts=ENST00000620503.1,ENST00000620503.1;gene_id=HG00140_ch_G0000262;gene_biotype=lncRNA;gene_name=ENSG00000273906;gene_sources=liftoff;ID=HG00140_ch_G0000262;Name=ENSG00000273906
HG00140_chrY	CAT	transcript	9228244	9230353	1000	-	.	source_transcript=ENST00000620503.1;source_transcript_name=ENST00000620503;source_gene=ENSG00000273906.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000273906.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000620503.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000620503.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273906;alternative_source_transcripts=ENST00000620503.1,ENST00000620503.1;transcript_id=HG00140_ch_T0000828;gene_id=HG00140_ch_G0000262;Parent=HG00140_ch_G0000262;transcript_name=HG00140_ch_T0000828;gene_name=ENSG00000273906;ID=HG00140_ch_T0000828;Name=ENSG00000273906
HG00140_chrY	CAT	exon	9228244	9230353	.	-	.	source_transcript=ENST00000620503.1;source_transcript_name=ENST00000620503;source_gene=ENSG00000273906.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000273906.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000620503.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000620503.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273906;alternative_source_transcripts=ENST00000620503.1,ENST00000620503.1;transcript_id=HG00140_ch_T0000828;gene_id=HG00140_ch_G0000262;Parent=HG00140_ch_T0000828;transcript_name=HG00140_ch_T0000828;gene_name=ENSG00000273906;ID=exon:HG00140_ch_T0000828:0;Name=ENSG00000273906;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	9237283	9283119	.	+	.	source_gene_common_name=AMELY;source_gene=ENSG00000099721.16;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;gene_id=HG00140_ch_G0000263;gene_biotype=protein_coding;gene_name=AMELY;gene_sources=liftoff;ID=HG00140_ch_G0000263;Name=AMELY
HG00140_chrY	CAT	transcript	9237283	9283119	100	+	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG00140_ch_T0000829;gene_id=HG00140_ch_G0000263;Parent=HG00140_ch_G0000263;transcript_name=HG00140_ch_T0000829;gene_name=AMELY;ID=HG00140_ch_T0000829;Name=AMELY
HG00140_chrY	CAT	exon	9237283	9237362	.	+	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG00140_ch_T0000829;gene_id=HG00140_ch_G0000263;Parent=HG00140_ch_T0000829;transcript_name=HG00140_ch_T0000829;gene_name=AMELY;ID=exon:HG00140_ch_T0000829:0;Name=AMELY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9237363	9274965	.	+	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG00140_ch_T0000829;gene_id=HG00140_ch_G0000263;Parent=HG00140_ch_T0000829;transcript_name=HG00140_ch_T0000829;gene_name=AMELY;ID=intron:HG00140_ch_T0000829:0;Name=AMELY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9274966	9275065	.	+	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG00140_ch_T0000829;gene_id=HG00140_ch_G0000263;Parent=HG00140_ch_T0000829;transcript_name=HG00140_ch_T0000829;gene_name=AMELY;ID=exon:HG00140_ch_T0000829:1;Name=AMELY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9275066	9276416	.	+	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG00140_ch_T0000829;gene_id=HG00140_ch_G0000263;Parent=HG00140_ch_T0000829;transcript_name=HG00140_ch_T0000829;gene_name=AMELY;ID=intron:HG00140_ch_T0000829:1;Name=AMELY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9276417	9276482	.	+	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG00140_ch_T0000829;gene_id=HG00140_ch_G0000263;Parent=HG00140_ch_T0000829;transcript_name=HG00140_ch_T0000829;gene_name=AMELY;ID=exon:HG00140_ch_T0000829:2;Name=AMELY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9276429	9276482	.	+	0	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG00140_ch_T0000829;gene_id=HG00140_ch_G0000263;Parent=HG00140_ch_T0000829;transcript_name=HG00140_ch_T0000829;gene_name=AMELY;ID=CDS:HG00140_ch_T0000829:0;Name=AMELY;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	9276429	9276431	.	+	0	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG00140_ch_T0000829;gene_id=HG00140_ch_G0000263;Parent=HG00140_ch_T0000829;transcript_name=HG00140_ch_T0000829;gene_name=AMELY;ID=start_codon:HG00140_ch_T0000829;Name=AMELY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9276483	9278983	.	+	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG00140_ch_T0000829;gene_id=HG00140_ch_G0000263;Parent=HG00140_ch_T0000829;transcript_name=HG00140_ch_T0000829;gene_name=AMELY;ID=intron:HG00140_ch_T0000829:2;Name=AMELY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9278984	9279031	.	+	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG00140_ch_T0000829;gene_id=HG00140_ch_G0000263;Parent=HG00140_ch_T0000829;transcript_name=HG00140_ch_T0000829;gene_name=AMELY;ID=exon:HG00140_ch_T0000829:3;Name=AMELY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9278984	9279031	.	+	0	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG00140_ch_T0000829;gene_id=HG00140_ch_G0000263;Parent=HG00140_ch_T0000829;transcript_name=HG00140_ch_T0000829;gene_name=AMELY;ID=CDS:HG00140_ch_T0000829:1;Name=AMELY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9279032	9280260	.	+	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG00140_ch_T0000829;gene_id=HG00140_ch_G0000263;Parent=HG00140_ch_T0000829;transcript_name=HG00140_ch_T0000829;gene_name=AMELY;ID=intron:HG00140_ch_T0000829:3;Name=AMELY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9280261	9280305	.	+	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG00140_ch_T0000829;gene_id=HG00140_ch_G0000263;Parent=HG00140_ch_T0000829;transcript_name=HG00140_ch_T0000829;gene_name=AMELY;ID=exon:HG00140_ch_T0000829:4;Name=AMELY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9280261	9280305	.	+	0	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG00140_ch_T0000829;gene_id=HG00140_ch_G0000263;Parent=HG00140_ch_T0000829;transcript_name=HG00140_ch_T0000829;gene_name=AMELY;ID=CDS:HG00140_ch_T0000829:2;Name=AMELY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9280306	9280574	.	+	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG00140_ch_T0000829;gene_id=HG00140_ch_G0000263;Parent=HG00140_ch_T0000829;transcript_name=HG00140_ch_T0000829;gene_name=AMELY;ID=intron:HG00140_ch_T0000829:4;Name=AMELY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9280575	9281000	.	+	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG00140_ch_T0000829;gene_id=HG00140_ch_G0000263;Parent=HG00140_ch_T0000829;transcript_name=HG00140_ch_T0000829;gene_name=AMELY;ID=exon:HG00140_ch_T0000829:5;Name=AMELY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9280575	9281000	.	+	0	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG00140_ch_T0000829;gene_id=HG00140_ch_G0000263;Parent=HG00140_ch_T0000829;transcript_name=HG00140_ch_T0000829;gene_name=AMELY;ID=CDS:HG00140_ch_T0000829:3;Name=AMELY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9281001	9282958	.	+	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG00140_ch_T0000829;gene_id=HG00140_ch_G0000263;Parent=HG00140_ch_T0000829;transcript_name=HG00140_ch_T0000829;gene_name=AMELY;ID=intron:HG00140_ch_T0000829:5;Name=AMELY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9282959	9283119	.	+	.	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG00140_ch_T0000829;gene_id=HG00140_ch_G0000263;Parent=HG00140_ch_T0000829;transcript_name=HG00140_ch_T0000829;gene_name=AMELY;ID=exon:HG00140_ch_T0000829:6;Name=AMELY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9282959	9282964	.	+	0	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG00140_ch_T0000829;gene_id=HG00140_ch_G0000263;Parent=HG00140_ch_T0000829;transcript_name=HG00140_ch_T0000829;gene_name=AMELY;ID=CDS:HG00140_ch_T0000829:4;Name=AMELY;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	9282962	9282964	.	+	0	source_transcript=ENST00000651267.2;source_transcript_name=AMELY-202;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651267.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651267.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000651267.2,ENST00000651267.2;transcript_id=HG00140_ch_T0000829;gene_id=HG00140_ch_G0000263;Parent=HG00140_ch_T0000829;transcript_name=HG00140_ch_T0000829;gene_name=AMELY;ID=stop_codon:HG00140_ch_T0000829;Name=AMELY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9276429	9282964	100	+	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG00140_ch_T0000831;gene_id=HG00140_ch_G0000263;Parent=HG00140_ch_G0000263;transcript_name=HG00140_ch_T0000831;gene_name=AMELY;ID=HG00140_ch_T0000831;Name=AMELY
HG00140_chrY	CAT	exon	9276429	9276482	.	+	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG00140_ch_T0000831;gene_id=HG00140_ch_G0000263;Parent=HG00140_ch_T0000831;transcript_name=HG00140_ch_T0000831;gene_name=AMELY;ID=exon:HG00140_ch_T0000831:0;Name=AMELY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9276429	9276482	.	+	0	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG00140_ch_T0000831;gene_id=HG00140_ch_G0000263;Parent=HG00140_ch_T0000831;transcript_name=HG00140_ch_T0000831;gene_name=AMELY;ID=CDS:HG00140_ch_T0000831:0;Name=AMELY;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	9276429	9276431	.	+	0	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG00140_ch_T0000831;gene_id=HG00140_ch_G0000263;Parent=HG00140_ch_T0000831;transcript_name=HG00140_ch_T0000831;gene_name=AMELY;ID=start_codon:HG00140_ch_T0000831;Name=AMELY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9276483	9278983	.	+	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG00140_ch_T0000831;gene_id=HG00140_ch_G0000263;Parent=HG00140_ch_T0000831;transcript_name=HG00140_ch_T0000831;gene_name=AMELY;ID=intron:HG00140_ch_T0000831:0;Name=AMELY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9278984	9279031	.	+	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG00140_ch_T0000831;gene_id=HG00140_ch_G0000263;Parent=HG00140_ch_T0000831;transcript_name=HG00140_ch_T0000831;gene_name=AMELY;ID=exon:HG00140_ch_T0000831:1;Name=AMELY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9278984	9279031	.	+	0	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG00140_ch_T0000831;gene_id=HG00140_ch_G0000263;Parent=HG00140_ch_T0000831;transcript_name=HG00140_ch_T0000831;gene_name=AMELY;ID=CDS:HG00140_ch_T0000831:1;Name=AMELY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9279032	9280127	.	+	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG00140_ch_T0000831;gene_id=HG00140_ch_G0000263;Parent=HG00140_ch_T0000831;transcript_name=HG00140_ch_T0000831;gene_name=AMELY;ID=intron:HG00140_ch_T0000831:1;Name=AMELY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9280128	9280169	.	+	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG00140_ch_T0000831;gene_id=HG00140_ch_G0000263;Parent=HG00140_ch_T0000831;transcript_name=HG00140_ch_T0000831;gene_name=AMELY;ID=exon:HG00140_ch_T0000831:2;Name=AMELY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9280128	9280169	.	+	0	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG00140_ch_T0000831;gene_id=HG00140_ch_G0000263;Parent=HG00140_ch_T0000831;transcript_name=HG00140_ch_T0000831;gene_name=AMELY;ID=CDS:HG00140_ch_T0000831:2;Name=AMELY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9280170	9280260	.	+	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG00140_ch_T0000831;gene_id=HG00140_ch_G0000263;Parent=HG00140_ch_T0000831;transcript_name=HG00140_ch_T0000831;gene_name=AMELY;ID=intron:HG00140_ch_T0000831:2;Name=AMELY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9280261	9280305	.	+	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG00140_ch_T0000831;gene_id=HG00140_ch_G0000263;Parent=HG00140_ch_T0000831;transcript_name=HG00140_ch_T0000831;gene_name=AMELY;ID=exon:HG00140_ch_T0000831:3;Name=AMELY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9280261	9280305	.	+	0	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG00140_ch_T0000831;gene_id=HG00140_ch_G0000263;Parent=HG00140_ch_T0000831;transcript_name=HG00140_ch_T0000831;gene_name=AMELY;ID=CDS:HG00140_ch_T0000831:3;Name=AMELY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9280306	9280574	.	+	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG00140_ch_T0000831;gene_id=HG00140_ch_G0000263;Parent=HG00140_ch_T0000831;transcript_name=HG00140_ch_T0000831;gene_name=AMELY;ID=intron:HG00140_ch_T0000831:3;Name=AMELY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9280575	9281000	.	+	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG00140_ch_T0000831;gene_id=HG00140_ch_G0000263;Parent=HG00140_ch_T0000831;transcript_name=HG00140_ch_T0000831;gene_name=AMELY;ID=exon:HG00140_ch_T0000831:4;Name=AMELY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9280575	9281000	.	+	0	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG00140_ch_T0000831;gene_id=HG00140_ch_G0000263;Parent=HG00140_ch_T0000831;transcript_name=HG00140_ch_T0000831;gene_name=AMELY;ID=CDS:HG00140_ch_T0000831:4;Name=AMELY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9281001	9282958	.	+	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG00140_ch_T0000831;gene_id=HG00140_ch_G0000263;Parent=HG00140_ch_T0000831;transcript_name=HG00140_ch_T0000831;gene_name=AMELY;ID=intron:HG00140_ch_T0000831:4;Name=AMELY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9282959	9282964	.	+	.	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG00140_ch_T0000831;gene_id=HG00140_ch_G0000263;Parent=HG00140_ch_T0000831;transcript_name=HG00140_ch_T0000831;gene_name=AMELY;ID=exon:HG00140_ch_T0000831:5;Name=AMELY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9282959	9282964	.	+	0	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG00140_ch_T0000831;gene_id=HG00140_ch_G0000263;Parent=HG00140_ch_T0000831;transcript_name=HG00140_ch_T0000831;gene_name=AMELY;ID=CDS:HG00140_ch_T0000831:5;Name=AMELY;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	9282962	9282964	.	+	0	source_transcript=ENST00000383036.1;source_transcript_name=AMELY-201;source_gene=ENSG00000099721.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000099721.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383036.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=ENST00000383036.1,ENST00000383036.1;transcript_id=HG00140_ch_T0000831;gene_id=HG00140_ch_G0000263;Parent=HG00140_ch_T0000831;transcript_name=HG00140_ch_T0000831;gene_name=AMELY;ID=stop_codon:HG00140_ch_T0000831;Name=AMELY;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	9247663	9248283	.	-	.	source_gene_common_name=ATP5PFP1;source_gene=ENSG00000237701.1;alternative_source_transcripts=ENST00000431631.1,ENST00000431631.1;gene_id=HG00140_ch_G0000264;gene_biotype=processed_pseudogene;gene_name=ATP5PFP1;gene_sources=liftoff;ID=HG00140_ch_G0000264;Name=ATP5PFP1
HG00140_chrY	CAT	transcript	9247663	9248283	1000	-	.	source_transcript=ENST00000431631.1;source_transcript_name=ATP5PFP1-201;source_gene=ENSG00000237701.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237701.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000431631.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431631.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ATP5PFP1;alternative_source_transcripts=ENST00000431631.1,ENST00000431631.1;transcript_id=HG00140_ch_T0000830;gene_id=HG00140_ch_G0000264;Parent=HG00140_ch_G0000264;transcript_name=HG00140_ch_T0000830;gene_name=ATP5PFP1;ID=HG00140_ch_T0000830;Name=ATP5PFP1
HG00140_chrY	CAT	exon	9247663	9247888	.	-	.	source_transcript=ENST00000431631.1;source_transcript_name=ATP5PFP1-201;source_gene=ENSG00000237701.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237701.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000431631.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431631.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ATP5PFP1;alternative_source_transcripts=ENST00000431631.1,ENST00000431631.1;transcript_id=HG00140_ch_T0000830;gene_id=HG00140_ch_G0000264;Parent=HG00140_ch_T0000830;transcript_name=HG00140_ch_T0000830;gene_name=ATP5PFP1;ID=exon:HG00140_ch_T0000830:0;Name=ATP5PFP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9247889	9248187	.	-	.	source_transcript=ENST00000431631.1;source_transcript_name=ATP5PFP1-201;source_gene=ENSG00000237701.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237701.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000431631.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431631.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ATP5PFP1;alternative_source_transcripts=ENST00000431631.1,ENST00000431631.1;transcript_id=HG00140_ch_T0000830;gene_id=HG00140_ch_G0000264;Parent=HG00140_ch_T0000830;transcript_name=HG00140_ch_T0000830;gene_name=ATP5PFP1;ID=intron:HG00140_ch_T0000830:0;Name=ATP5PFP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9248188	9248283	.	-	.	source_transcript=ENST00000431631.1;source_transcript_name=ATP5PFP1-201;source_gene=ENSG00000237701.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237701.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000431631.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431631.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ATP5PFP1;alternative_source_transcripts=ENST00000431631.1,ENST00000431631.1;transcript_id=HG00140_ch_T0000830;gene_id=HG00140_ch_G0000264;Parent=HG00140_ch_T0000830;transcript_name=HG00140_ch_T0000830;gene_name=ATP5PFP1;ID=exon:HG00140_ch_T0000830:1;Name=ATP5PFP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	9310786	9311331	.	-	.	source_gene_common_name=GOT2P5;source_gene=ENSG00000233634.1;alternative_source_transcripts=ENST00000433995.1,ENST00000433995.1;gene_id=HG00140_ch_G0000265;gene_biotype=processed_pseudogene;gene_name=GOT2P5;gene_sources=liftoff;ID=HG00140_ch_G0000265;Name=GOT2P5
HG00140_chrY	CAT	transcript	9310786	9311331	1000	-	.	source_transcript=ENST00000433995.1;source_transcript_name=GOT2P5-201;source_gene=ENSG00000233634.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233634.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000433995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433995.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOT2P5;alternative_source_transcripts=ENST00000433995.1,ENST00000433995.1;transcript_id=HG00140_ch_T0000832;gene_id=HG00140_ch_G0000265;Parent=HG00140_ch_G0000265;transcript_name=HG00140_ch_T0000832;gene_name=GOT2P5;ID=HG00140_ch_T0000832;Name=GOT2P5
HG00140_chrY	CAT	exon	9310786	9311331	.	-	.	source_transcript=ENST00000433995.1;source_transcript_name=GOT2P5-201;source_gene=ENSG00000233634.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233634.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000433995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433995.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOT2P5;alternative_source_transcripts=ENST00000433995.1,ENST00000433995.1;transcript_id=HG00140_ch_T0000832;gene_id=HG00140_ch_G0000265;Parent=HG00140_ch_T0000832;transcript_name=HG00140_ch_T0000832;gene_name=GOT2P5;ID=exon:HG00140_ch_T0000832:0;Name=GOT2P5;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	9359698	9359889	.	-	.	source_gene_common_name=ENSG00000274365;source_gene=ENSG00000274365.1;alternative_source_transcripts=ENST00000610687.1,ENST00000610687.1;gene_id=HG00140_ch_G0000266;gene_biotype=processed_pseudogene;gene_name=ENSG00000274365;gene_sources=liftoff;ID=HG00140_ch_G0000266;Name=ENSG00000274365
HG00140_chrY	CAT	transcript	9359698	9359889	1000	-	.	source_transcript=ENST00000610687.1;source_transcript_name=ENST00000610687;source_gene=ENSG00000274365.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274365.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000610687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000610687.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274365;alternative_source_transcripts=ENST00000610687.1,ENST00000610687.1;transcript_id=HG00140_ch_T0000833;gene_id=HG00140_ch_G0000266;Parent=HG00140_ch_G0000266;transcript_name=HG00140_ch_T0000833;gene_name=ENSG00000274365;ID=HG00140_ch_T0000833;Name=ENSG00000274365
HG00140_chrY	CAT	exon	9359698	9359889	.	-	.	source_transcript=ENST00000610687.1;source_transcript_name=ENST00000610687;source_gene=ENSG00000274365.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274365.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000610687.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000610687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274365;alternative_source_transcripts=ENST00000610687.1,ENST00000610687.1;transcript_id=HG00140_ch_T0000833;gene_id=HG00140_ch_G0000266;Parent=HG00140_ch_T0000833;transcript_name=HG00140_ch_T0000833;gene_name=ENSG00000274365;ID=exon:HG00140_ch_T0000833:0;Name=ENSG00000274365;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	9429865	9430083	.	+	.	source_gene_common_name=SRIP3;source_gene=ENSG00000224953.1;alternative_source_transcripts=ENST00000413200.1,ENST00000413200.1;gene_id=HG00140_ch_G0000267;gene_biotype=processed_pseudogene;gene_name=SRIP3;gene_sources=liftoff;ID=HG00140_ch_G0000267;Name=SRIP3
HG00140_chrY	CAT	transcript	9429865	9430083	1000	+	.	source_transcript=ENST00000413200.1;source_transcript_name=SRIP3-201;source_gene=ENSG00000224953.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224953.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000413200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413200.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRIP3;alternative_source_transcripts=ENST00000413200.1,ENST00000413200.1;transcript_id=HG00140_ch_T0000834;gene_id=HG00140_ch_G0000267;Parent=HG00140_ch_G0000267;transcript_name=HG00140_ch_T0000834;gene_name=SRIP3;ID=HG00140_ch_T0000834;Name=SRIP3
HG00140_chrY	CAT	exon	9429865	9430083	.	+	.	source_transcript=ENST00000413200.1;source_transcript_name=SRIP3-201;source_gene=ENSG00000224953.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224953.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000413200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRIP3;alternative_source_transcripts=ENST00000413200.1,ENST00000413200.1;transcript_id=HG00140_ch_T0000834;gene_id=HG00140_ch_G0000267;Parent=HG00140_ch_T0000834;transcript_name=HG00140_ch_T0000834;gene_name=SRIP3;ID=exon:HG00140_ch_T0000834:0;Name=SRIP3;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	9612345	9612812	.	-	.	source_gene_common_name=TSPY17P;source_gene=ENSG00000232620.1;alternative_source_transcripts=ENST00000450329.1,ENST00000450329.1;gene_id=HG00140_ch_G0000268;gene_biotype=unprocessed_pseudogene;gene_name=TSPY17P;gene_sources=liftoff;ID=HG00140_ch_G0000268;Name=TSPY17P
HG00140_chrY	CAT	transcript	9612345	9612812	1000	-	.	source_transcript=ENST00000450329.1;source_transcript_name=TSPY17P-201;source_gene=ENSG00000232620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450329.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY17P;alternative_source_transcripts=ENST00000450329.1,ENST00000450329.1;transcript_id=HG00140_ch_T0000835;gene_id=HG00140_ch_G0000268;Parent=HG00140_ch_G0000268;transcript_name=HG00140_ch_T0000835;gene_name=TSPY17P;ID=HG00140_ch_T0000835;Name=TSPY17P
HG00140_chrY	CAT	exon	9612345	9612812	.	-	.	source_transcript=ENST00000450329.1;source_transcript_name=TSPY17P-201;source_gene=ENSG00000232620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450329.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY17P;alternative_source_transcripts=ENST00000450329.1,ENST00000450329.1;transcript_id=HG00140_ch_T0000835;gene_id=HG00140_ch_G0000268;Parent=HG00140_ch_T0000835;transcript_name=HG00140_ch_T0000835;gene_name=TSPY17P;ID=exon:HG00140_ch_T0000835:0;Name=TSPY17P;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	9636518	9640299	.	+	.	source_gene_common_name=ENSG00000235895;source_gene=ENSG00000235895.1;alternative_source_transcripts=ENST00000425857.1,ENST00000425857.1;gene_id=HG00140_ch_G0000269;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000235895;gene_sources=liftoff;ID=HG00140_ch_G0000269;Name=ENSG00000235895
HG00140_chrY	CAT	transcript	9636518	9640299	1000	+	.	source_transcript=ENST00000425857.1;source_transcript_name=ENST00000425857;source_gene=ENSG00000235895.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235895.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425857.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425857.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235895;alternative_source_transcripts=ENST00000425857.1,ENST00000425857.1;transcript_id=HG00140_ch_T0000836;gene_id=HG00140_ch_G0000269;Parent=HG00140_ch_G0000269;transcript_name=HG00140_ch_T0000836;gene_name=ENSG00000235895;ID=HG00140_ch_T0000836;Name=ENSG00000235895
HG00140_chrY	CAT	exon	9636518	9636690	.	+	.	source_transcript=ENST00000425857.1;source_transcript_name=ENST00000425857;source_gene=ENSG00000235895.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235895.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425857.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425857.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235895;alternative_source_transcripts=ENST00000425857.1,ENST00000425857.1;transcript_id=HG00140_ch_T0000836;gene_id=HG00140_ch_G0000269;Parent=HG00140_ch_T0000836;transcript_name=HG00140_ch_T0000836;gene_name=ENSG00000235895;ID=exon:HG00140_ch_T0000836:0;Name=ENSG00000235895;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9636691	9640203	.	+	.	source_transcript=ENST00000425857.1;source_transcript_name=ENST00000425857;source_gene=ENSG00000235895.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235895.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425857.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425857.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235895;alternative_source_transcripts=ENST00000425857.1,ENST00000425857.1;transcript_id=HG00140_ch_T0000836;gene_id=HG00140_ch_G0000269;Parent=HG00140_ch_T0000836;transcript_name=HG00140_ch_T0000836;gene_name=ENSG00000235895;ID=intron:HG00140_ch_T0000836:0;Name=ENSG00000235895;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9640204	9640299	.	+	.	source_transcript=ENST00000425857.1;source_transcript_name=ENST00000425857;source_gene=ENSG00000235895.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235895.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425857.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425857.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235895;alternative_source_transcripts=ENST00000425857.1,ENST00000425857.1;transcript_id=HG00140_ch_T0000836;gene_id=HG00140_ch_G0000269;Parent=HG00140_ch_T0000836;transcript_name=HG00140_ch_T0000836;gene_name=ENSG00000235895;ID=exon:HG00140_ch_T0000836:1;Name=ENSG00000235895;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	9659575	9670878	.	+	.	source_gene_common_name=TTTY8B;source_gene=ENSG00000185700.11;alternative_source_transcripts=ENST00000736417.1;gene_id=HG00140_ch_G0000270;gene_biotype=lncRNA;gene_name=TTTY8B;gene_sources=liftoff;ID=HG00140_ch_G0000270;Name=TTTY8B
HG00140_chrY	CAT	transcript	9659575	9670201	1000	+	.	source_transcript=ENST00000736417.1;source_transcript_name=TTTY8B-204;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736417.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736417.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736417.1;transcript_id=HG00140_ch_T0000837;gene_id=HG00140_ch_G0000270;Parent=HG00140_ch_G0000270;transcript_name=HG00140_ch_T0000837;gene_name=TTTY8B;ID=HG00140_ch_T0000837;Name=TTTY8B
HG00140_chrY	CAT	exon	9659575	9659614	.	+	.	source_transcript=ENST00000736417.1;source_transcript_name=TTTY8B-204;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736417.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736417.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736417.1;transcript_id=HG00140_ch_T0000837;gene_id=HG00140_ch_G0000270;Parent=HG00140_ch_T0000837;transcript_name=HG00140_ch_T0000837;gene_name=TTTY8B;ID=exon:HG00140_ch_T0000837:0;Name=TTTY8B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9659615	9660248	.	+	.	source_transcript=ENST00000736417.1;source_transcript_name=TTTY8B-204;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736417.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736417.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736417.1;transcript_id=HG00140_ch_T0000837;gene_id=HG00140_ch_G0000270;Parent=HG00140_ch_T0000837;transcript_name=HG00140_ch_T0000837;gene_name=TTTY8B;ID=intron:HG00140_ch_T0000837:0;Name=TTTY8B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9660249	9660453	.	+	.	source_transcript=ENST00000736417.1;source_transcript_name=TTTY8B-204;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736417.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736417.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736417.1;transcript_id=HG00140_ch_T0000837;gene_id=HG00140_ch_G0000270;Parent=HG00140_ch_T0000837;transcript_name=HG00140_ch_T0000837;gene_name=TTTY8B;ID=exon:HG00140_ch_T0000837:1;Name=TTTY8B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9660454	9669980	.	+	.	source_transcript=ENST00000736417.1;source_transcript_name=TTTY8B-204;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736417.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736417.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736417.1;transcript_id=HG00140_ch_T0000837;gene_id=HG00140_ch_G0000270;Parent=HG00140_ch_T0000837;transcript_name=HG00140_ch_T0000837;gene_name=TTTY8B;ID=intron:HG00140_ch_T0000837:1;Name=TTTY8B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9669981	9670201	.	+	.	source_transcript=ENST00000736417.1;source_transcript_name=TTTY8B-204;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736417.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736417.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736417.1;transcript_id=HG00140_ch_T0000837;gene_id=HG00140_ch_G0000270;Parent=HG00140_ch_T0000837;transcript_name=HG00140_ch_T0000837;gene_name=TTTY8B;ID=exon:HG00140_ch_T0000837:2;Name=TTTY8B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9659575	9662235	1000	+	.	source_transcript=ENST00000736418.1;source_transcript_name=TTTY8B-205;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736418.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736418.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736418.1;transcript_id=HG00140_ch_T0000838;gene_id=HG00140_ch_G0000270;Parent=HG00140_ch_G0000270;transcript_name=HG00140_ch_T0000838;gene_name=TTTY8B;ID=HG00140_ch_T0000838;Name=TTTY8B
HG00140_chrY	CAT	exon	9659575	9659614	.	+	.	source_transcript=ENST00000736418.1;source_transcript_name=TTTY8B-205;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736418.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736418.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736418.1;transcript_id=HG00140_ch_T0000838;gene_id=HG00140_ch_G0000270;Parent=HG00140_ch_T0000838;transcript_name=HG00140_ch_T0000838;gene_name=TTTY8B;ID=exon:HG00140_ch_T0000838:0;Name=TTTY8B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9659615	9660248	.	+	.	source_transcript=ENST00000736418.1;source_transcript_name=TTTY8B-205;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736418.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736418.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736418.1;transcript_id=HG00140_ch_T0000838;gene_id=HG00140_ch_G0000270;Parent=HG00140_ch_T0000838;transcript_name=HG00140_ch_T0000838;gene_name=TTTY8B;ID=intron:HG00140_ch_T0000838:0;Name=TTTY8B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9660249	9660453	.	+	.	source_transcript=ENST00000736418.1;source_transcript_name=TTTY8B-205;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736418.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736418.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736418.1;transcript_id=HG00140_ch_T0000838;gene_id=HG00140_ch_G0000270;Parent=HG00140_ch_T0000838;transcript_name=HG00140_ch_T0000838;gene_name=TTTY8B;ID=exon:HG00140_ch_T0000838:1;Name=TTTY8B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9660454	9662045	.	+	.	source_transcript=ENST00000736418.1;source_transcript_name=TTTY8B-205;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736418.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736418.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736418.1;transcript_id=HG00140_ch_T0000838;gene_id=HG00140_ch_G0000270;Parent=HG00140_ch_T0000838;transcript_name=HG00140_ch_T0000838;gene_name=TTTY8B;ID=intron:HG00140_ch_T0000838:1;Name=TTTY8B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9662046	9662235	.	+	.	source_transcript=ENST00000736418.1;source_transcript_name=TTTY8B-205;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736418.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736418.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736418.1;transcript_id=HG00140_ch_T0000838;gene_id=HG00140_ch_G0000270;Parent=HG00140_ch_T0000838;transcript_name=HG00140_ch_T0000838;gene_name=TTTY8B;ID=exon:HG00140_ch_T0000838:2;Name=TTTY8B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9659589	9670878	1000	+	.	source_transcript=ENST00000736416.1;source_transcript_name=TTTY8B-203;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736416.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736416.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736416.1;transcript_id=HG00140_ch_T0000839;gene_id=HG00140_ch_G0000270;Parent=HG00140_ch_G0000270;transcript_name=HG00140_ch_T0000839;gene_name=TTTY8B;ID=HG00140_ch_T0000839;Name=TTTY8B
HG00140_chrY	CAT	exon	9659589	9659771	.	+	.	source_transcript=ENST00000736416.1;source_transcript_name=TTTY8B-203;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736416.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736416.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736416.1;transcript_id=HG00140_ch_T0000839;gene_id=HG00140_ch_G0000270;Parent=HG00140_ch_T0000839;transcript_name=HG00140_ch_T0000839;gene_name=TTTY8B;ID=exon:HG00140_ch_T0000839:0;Name=TTTY8B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9659772	9660248	.	+	.	source_transcript=ENST00000736416.1;source_transcript_name=TTTY8B-203;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736416.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736416.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736416.1;transcript_id=HG00140_ch_T0000839;gene_id=HG00140_ch_G0000270;Parent=HG00140_ch_T0000839;transcript_name=HG00140_ch_T0000839;gene_name=TTTY8B;ID=intron:HG00140_ch_T0000839:0;Name=TTTY8B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9660249	9660453	.	+	.	source_transcript=ENST00000736416.1;source_transcript_name=TTTY8B-203;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736416.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736416.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736416.1;transcript_id=HG00140_ch_T0000839;gene_id=HG00140_ch_G0000270;Parent=HG00140_ch_T0000839;transcript_name=HG00140_ch_T0000839;gene_name=TTTY8B;ID=exon:HG00140_ch_T0000839:1;Name=TTTY8B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9660454	9669980	.	+	.	source_transcript=ENST00000736416.1;source_transcript_name=TTTY8B-203;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736416.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736416.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736416.1;transcript_id=HG00140_ch_T0000839;gene_id=HG00140_ch_G0000270;Parent=HG00140_ch_T0000839;transcript_name=HG00140_ch_T0000839;gene_name=TTTY8B;ID=intron:HG00140_ch_T0000839:1;Name=TTTY8B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9669981	9670878	.	+	.	source_transcript=ENST00000736416.1;source_transcript_name=TTTY8B-203;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000736416.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000736416.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000736416.1;transcript_id=HG00140_ch_T0000839;gene_id=HG00140_ch_G0000270;Parent=HG00140_ch_T0000839;transcript_name=HG00140_ch_T0000839;gene_name=TTTY8B;ID=exon:HG00140_ch_T0000839:2;Name=TTTY8B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9659605	9662493	1000	+	.	source_transcript=ENST00000455570.6;source_transcript_name=TTTY8B-202;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455570.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000455570.6;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000455570.6;transcript_id=HG00140_ch_T0000840;gene_id=HG00140_ch_G0000270;Parent=HG00140_ch_G0000270;transcript_name=HG00140_ch_T0000840;gene_name=TTTY8B;ID=HG00140_ch_T0000840;Name=TTTY8B
HG00140_chrY	CAT	exon	9659605	9659771	.	+	.	source_transcript=ENST00000455570.6;source_transcript_name=TTTY8B-202;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455570.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000455570.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000455570.6;transcript_id=HG00140_ch_T0000840;gene_id=HG00140_ch_G0000270;Parent=HG00140_ch_T0000840;transcript_name=HG00140_ch_T0000840;gene_name=TTTY8B;ID=exon:HG00140_ch_T0000840:0;Name=TTTY8B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9659772	9660248	.	+	.	source_transcript=ENST00000455570.6;source_transcript_name=TTTY8B-202;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455570.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000455570.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000455570.6;transcript_id=HG00140_ch_T0000840;gene_id=HG00140_ch_G0000270;Parent=HG00140_ch_T0000840;transcript_name=HG00140_ch_T0000840;gene_name=TTTY8B;ID=intron:HG00140_ch_T0000840:0;Name=TTTY8B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9660249	9660453	.	+	.	source_transcript=ENST00000455570.6;source_transcript_name=TTTY8B-202;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455570.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000455570.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000455570.6;transcript_id=HG00140_ch_T0000840;gene_id=HG00140_ch_G0000270;Parent=HG00140_ch_T0000840;transcript_name=HG00140_ch_T0000840;gene_name=TTTY8B;ID=exon:HG00140_ch_T0000840:1;Name=TTTY8B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9660454	9662316	.	+	.	source_transcript=ENST00000455570.6;source_transcript_name=TTTY8B-202;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455570.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000455570.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000455570.6;transcript_id=HG00140_ch_T0000840;gene_id=HG00140_ch_G0000270;Parent=HG00140_ch_T0000840;transcript_name=HG00140_ch_T0000840;gene_name=TTTY8B;ID=intron:HG00140_ch_T0000840:1;Name=TTTY8B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9662317	9662493	.	+	.	source_transcript=ENST00000455570.6;source_transcript_name=TTTY8B-202;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455570.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000455570.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000455570.6;transcript_id=HG00140_ch_T0000840;gene_id=HG00140_ch_G0000270;Parent=HG00140_ch_T0000840;transcript_name=HG00140_ch_T0000840;gene_name=TTTY8B;ID=exon:HG00140_ch_T0000840:2;Name=TTTY8B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9659611	9662235	1000	+	.	source_transcript=ENST00000328819.5;source_transcript_name=TTTY8B-201;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000328819.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000328819.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000328819.5;transcript_id=HG00140_ch_T0000841;gene_id=HG00140_ch_G0000270;Parent=HG00140_ch_G0000270;transcript_name=HG00140_ch_T0000841;gene_name=TTTY8B;ID=HG00140_ch_T0000841;Name=TTTY8B
HG00140_chrY	CAT	exon	9659611	9659771	.	+	.	source_transcript=ENST00000328819.5;source_transcript_name=TTTY8B-201;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000328819.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000328819.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000328819.5;transcript_id=HG00140_ch_T0000841;gene_id=HG00140_ch_G0000270;Parent=HG00140_ch_T0000841;transcript_name=HG00140_ch_T0000841;gene_name=TTTY8B;ID=exon:HG00140_ch_T0000841:0;Name=TTTY8B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9659772	9660248	.	+	.	source_transcript=ENST00000328819.5;source_transcript_name=TTTY8B-201;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000328819.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000328819.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000328819.5;transcript_id=HG00140_ch_T0000841;gene_id=HG00140_ch_G0000270;Parent=HG00140_ch_T0000841;transcript_name=HG00140_ch_T0000841;gene_name=TTTY8B;ID=intron:HG00140_ch_T0000841:0;Name=TTTY8B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9660249	9660453	.	+	.	source_transcript=ENST00000328819.5;source_transcript_name=TTTY8B-201;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000328819.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000328819.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000328819.5;transcript_id=HG00140_ch_T0000841;gene_id=HG00140_ch_G0000270;Parent=HG00140_ch_T0000841;transcript_name=HG00140_ch_T0000841;gene_name=TTTY8B;ID=exon:HG00140_ch_T0000841:1;Name=TTTY8B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9660454	9662045	.	+	.	source_transcript=ENST00000328819.5;source_transcript_name=TTTY8B-201;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000328819.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000328819.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000328819.5;transcript_id=HG00140_ch_T0000841;gene_id=HG00140_ch_G0000270;Parent=HG00140_ch_T0000841;transcript_name=HG00140_ch_T0000841;gene_name=TTTY8B;ID=intron:HG00140_ch_T0000841:1;Name=TTTY8B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9662046	9662235	.	+	.	source_transcript=ENST00000328819.5;source_transcript_name=TTTY8B-201;source_gene=ENSG00000185700.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000185700.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000328819.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000328819.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=ENST00000328819.5;transcript_id=HG00140_ch_T0000841;gene_id=HG00140_ch_G0000270;Parent=HG00140_ch_T0000841;transcript_name=HG00140_ch_T0000841;gene_name=TTTY8B;ID=exon:HG00140_ch_T0000841:2;Name=TTTY8B;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	9671173	9727206	.	+	.	source_gene_common_name=TTTY2B;source_gene=ENSG00000212856.7;alternative_source_transcripts=ENST00000651733.2;gene_id=HG00140_ch_G0000271;gene_biotype=lncRNA;gene_name=TTTY2B;gene_sources=liftoff;ID=HG00140_ch_G0000271;Name=TTTY2B
HG00140_chrY	CAT	transcript	9671173	9727018	1000	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2;transcript_id=HG00140_ch_T0000842;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_G0000271;transcript_name=HG00140_ch_T0000842;gene_name=TTTY2B;ID=HG00140_ch_T0000842;Name=TTTY2B
HG00140_chrY	CAT	exon	9671173	9671939	.	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2;transcript_id=HG00140_ch_T0000842;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000842;transcript_name=HG00140_ch_T0000842;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000842:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9671940	9677177	.	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2;transcript_id=HG00140_ch_T0000842;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000842;transcript_name=HG00140_ch_T0000842;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000842:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9677178	9677316	.	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2;transcript_id=HG00140_ch_T0000842;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000842;transcript_name=HG00140_ch_T0000842;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000842:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9677317	9681262	.	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2;transcript_id=HG00140_ch_T0000842;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000842;transcript_name=HG00140_ch_T0000842;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000842:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9681263	9681444	.	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2;transcript_id=HG00140_ch_T0000842;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000842;transcript_name=HG00140_ch_T0000842;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000842:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9681445	9682603	.	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2;transcript_id=HG00140_ch_T0000842;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000842;transcript_name=HG00140_ch_T0000842;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000842:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9682604	9682771	.	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2;transcript_id=HG00140_ch_T0000842;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000842;transcript_name=HG00140_ch_T0000842;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000842:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9682772	9683706	.	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2;transcript_id=HG00140_ch_T0000842;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000842;transcript_name=HG00140_ch_T0000842;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000842:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9683707	9683927	.	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2;transcript_id=HG00140_ch_T0000842;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000842;transcript_name=HG00140_ch_T0000842;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000842:4;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9683928	9686911	.	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2;transcript_id=HG00140_ch_T0000842;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000842;transcript_name=HG00140_ch_T0000842;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000842:4;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9686912	9687818	.	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2;transcript_id=HG00140_ch_T0000842;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000842;transcript_name=HG00140_ch_T0000842;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000842:5;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9687819	9703860	.	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2;transcript_id=HG00140_ch_T0000842;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000842;transcript_name=HG00140_ch_T0000842;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000842:5;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9703861	9703948	.	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2;transcript_id=HG00140_ch_T0000842;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000842;transcript_name=HG00140_ch_T0000842;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000842:6;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9703949	9704122	.	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2;transcript_id=HG00140_ch_T0000842;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000842;transcript_name=HG00140_ch_T0000842;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000842:6;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9704123	9704333	.	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2;transcript_id=HG00140_ch_T0000842;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000842;transcript_name=HG00140_ch_T0000842;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000842:7;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9704334	9710858	.	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2;transcript_id=HG00140_ch_T0000842;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000842;transcript_name=HG00140_ch_T0000842;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000842:7;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9710859	9710936	.	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2;transcript_id=HG00140_ch_T0000842;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000842;transcript_name=HG00140_ch_T0000842;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000842:8;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9710937	9720893	.	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2;transcript_id=HG00140_ch_T0000842;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000842;transcript_name=HG00140_ch_T0000842;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000842:8;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9720894	9721042	.	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2;transcript_id=HG00140_ch_T0000842;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000842;transcript_name=HG00140_ch_T0000842;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000842:9;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9721043	9721734	.	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2;transcript_id=HG00140_ch_T0000842;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000842;transcript_name=HG00140_ch_T0000842;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000842:9;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9721735	9721891	.	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2;transcript_id=HG00140_ch_T0000842;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000842;transcript_name=HG00140_ch_T0000842;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000842:10;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9721892	9724920	.	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2;transcript_id=HG00140_ch_T0000842;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000842;transcript_name=HG00140_ch_T0000842;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000842:10;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9724921	9725118	.	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2;transcript_id=HG00140_ch_T0000842;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000842;transcript_name=HG00140_ch_T0000842;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000842:11;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9725119	9726341	.	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2;transcript_id=HG00140_ch_T0000842;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000842;transcript_name=HG00140_ch_T0000842;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000842:11;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9726342	9727018	.	+	.	source_transcript=ENST00000651733.2;source_transcript_name=TTTY2B-202;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651733.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651733.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000651733.2;transcript_id=HG00140_ch_T0000842;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000842;transcript_name=HG00140_ch_T0000842;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000842:12;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9680852	9721983	1000	+	.	source_transcript=ENST00000735422.1;source_transcript_name=TTTY2B-203;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735422.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735422.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735422.1;transcript_id=HG00140_ch_T0000852;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_G0000271;transcript_name=HG00140_ch_T0000852;gene_name=TTTY2B;ID=HG00140_ch_T0000852;Name=TTTY2B
HG00140_chrY	CAT	exon	9680852	9680914	.	+	.	source_transcript=ENST00000735422.1;source_transcript_name=TTTY2B-203;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735422.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735422.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735422.1;transcript_id=HG00140_ch_T0000852;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000852;transcript_name=HG00140_ch_T0000852;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000852:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9680915	9681262	.	+	.	source_transcript=ENST00000735422.1;source_transcript_name=TTTY2B-203;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735422.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735422.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735422.1;transcript_id=HG00140_ch_T0000852;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000852;transcript_name=HG00140_ch_T0000852;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000852:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9681263	9681444	.	+	.	source_transcript=ENST00000735422.1;source_transcript_name=TTTY2B-203;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735422.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735422.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735422.1;transcript_id=HG00140_ch_T0000852;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000852;transcript_name=HG00140_ch_T0000852;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000852:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9681445	9720893	.	+	.	source_transcript=ENST00000735422.1;source_transcript_name=TTTY2B-203;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735422.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735422.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735422.1;transcript_id=HG00140_ch_T0000852;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000852;transcript_name=HG00140_ch_T0000852;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000852:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9720894	9721042	.	+	.	source_transcript=ENST00000735422.1;source_transcript_name=TTTY2B-203;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735422.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735422.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735422.1;transcript_id=HG00140_ch_T0000852;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000852;transcript_name=HG00140_ch_T0000852;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000852:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9721043	9721734	.	+	.	source_transcript=ENST00000735422.1;source_transcript_name=TTTY2B-203;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735422.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735422.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735422.1;transcript_id=HG00140_ch_T0000852;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000852;transcript_name=HG00140_ch_T0000852;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000852:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9721735	9721983	.	+	.	source_transcript=ENST00000735422.1;source_transcript_name=TTTY2B-203;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735422.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735422.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735422.1;transcript_id=HG00140_ch_T0000852;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000852;transcript_name=HG00140_ch_T0000852;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000852:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9687602	9727021	1000	+	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1;transcript_id=HG00140_ch_T0000862;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_G0000271;transcript_name=HG00140_ch_T0000862;gene_name=TTTY2B;ID=HG00140_ch_T0000862;Name=TTTY2B
HG00140_chrY	CAT	exon	9687602	9687818	.	+	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1;transcript_id=HG00140_ch_T0000862;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000862;transcript_name=HG00140_ch_T0000862;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000862:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9687819	9704122	.	+	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1;transcript_id=HG00140_ch_T0000862;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000862;transcript_name=HG00140_ch_T0000862;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000862:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9704123	9704333	.	+	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1;transcript_id=HG00140_ch_T0000862;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000862;transcript_name=HG00140_ch_T0000862;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000862:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9704334	9710858	.	+	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1;transcript_id=HG00140_ch_T0000862;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000862;transcript_name=HG00140_ch_T0000862;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000862:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9710859	9710936	.	+	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1;transcript_id=HG00140_ch_T0000862;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000862;transcript_name=HG00140_ch_T0000862;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000862:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9710937	9720893	.	+	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1;transcript_id=HG00140_ch_T0000862;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000862;transcript_name=HG00140_ch_T0000862;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000862:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9720894	9721042	.	+	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1;transcript_id=HG00140_ch_T0000862;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000862;transcript_name=HG00140_ch_T0000862;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000862:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9721043	9721734	.	+	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1;transcript_id=HG00140_ch_T0000862;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000862;transcript_name=HG00140_ch_T0000862;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000862:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9721735	9721891	.	+	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1;transcript_id=HG00140_ch_T0000862;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000862;transcript_name=HG00140_ch_T0000862;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000862:4;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9721892	9724721	.	+	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1;transcript_id=HG00140_ch_T0000862;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000862;transcript_name=HG00140_ch_T0000862;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000862:4;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9724722	9724800	.	+	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1;transcript_id=HG00140_ch_T0000862;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000862;transcript_name=HG00140_ch_T0000862;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000862:5;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9724801	9724920	.	+	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1;transcript_id=HG00140_ch_T0000862;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000862;transcript_name=HG00140_ch_T0000862;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000862:5;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9724921	9725118	.	+	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1;transcript_id=HG00140_ch_T0000862;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000862;transcript_name=HG00140_ch_T0000862;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000862:6;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9725119	9726341	.	+	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1;transcript_id=HG00140_ch_T0000862;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000862;transcript_name=HG00140_ch_T0000862;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000862:6;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9726342	9727021	.	+	.	source_transcript=ENST00000735424.1;source_transcript_name=TTTY2B-205;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735424.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735424.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735424.1;transcript_id=HG00140_ch_T0000862;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000862;transcript_name=HG00140_ch_T0000862;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000862:7;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9687618	9727206	1000	+	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1;transcript_id=HG00140_ch_T0000863;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_G0000271;transcript_name=HG00140_ch_T0000863;gene_name=TTTY2B;ID=HG00140_ch_T0000863;Name=TTTY2B
HG00140_chrY	CAT	exon	9687618	9687818	.	+	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1;transcript_id=HG00140_ch_T0000863;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000863;transcript_name=HG00140_ch_T0000863;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000863:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9687819	9703860	.	+	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1;transcript_id=HG00140_ch_T0000863;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000863;transcript_name=HG00140_ch_T0000863;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000863:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9703861	9703948	.	+	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1;transcript_id=HG00140_ch_T0000863;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000863;transcript_name=HG00140_ch_T0000863;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000863:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9703949	9704122	.	+	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1;transcript_id=HG00140_ch_T0000863;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000863;transcript_name=HG00140_ch_T0000863;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000863:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9704123	9704333	.	+	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1;transcript_id=HG00140_ch_T0000863;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000863;transcript_name=HG00140_ch_T0000863;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000863:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9704334	9710858	.	+	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1;transcript_id=HG00140_ch_T0000863;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000863;transcript_name=HG00140_ch_T0000863;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000863:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9710859	9710936	.	+	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1;transcript_id=HG00140_ch_T0000863;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000863;transcript_name=HG00140_ch_T0000863;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000863:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9710937	9712956	.	+	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1;transcript_id=HG00140_ch_T0000863;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000863;transcript_name=HG00140_ch_T0000863;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000863:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9712957	9713061	.	+	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1;transcript_id=HG00140_ch_T0000863;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000863;transcript_name=HG00140_ch_T0000863;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000863:4;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9713062	9713412	.	+	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1;transcript_id=HG00140_ch_T0000863;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000863;transcript_name=HG00140_ch_T0000863;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000863:4;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9713413	9713499	.	+	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1;transcript_id=HG00140_ch_T0000863;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000863;transcript_name=HG00140_ch_T0000863;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000863:5;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9713500	9720893	.	+	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1;transcript_id=HG00140_ch_T0000863;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000863;transcript_name=HG00140_ch_T0000863;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000863:5;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9720894	9721121	.	+	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1;transcript_id=HG00140_ch_T0000863;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000863;transcript_name=HG00140_ch_T0000863;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000863:6;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9721122	9721734	.	+	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1;transcript_id=HG00140_ch_T0000863;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000863;transcript_name=HG00140_ch_T0000863;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000863:6;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9721735	9721891	.	+	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1;transcript_id=HG00140_ch_T0000863;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000863;transcript_name=HG00140_ch_T0000863;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000863:7;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9721892	9724920	.	+	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1;transcript_id=HG00140_ch_T0000863;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000863;transcript_name=HG00140_ch_T0000863;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000863:7;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9724921	9725118	.	+	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1;transcript_id=HG00140_ch_T0000863;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000863;transcript_name=HG00140_ch_T0000863;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000863:8;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9725119	9726341	.	+	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1;transcript_id=HG00140_ch_T0000863;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000863;transcript_name=HG00140_ch_T0000863;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000863:8;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9726342	9727206	.	+	.	source_transcript=ENST00000735423.1;source_transcript_name=TTTY2B-204;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735423.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735423.1;transcript_id=HG00140_ch_T0000863;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000863;transcript_name=HG00140_ch_T0000863;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000863:9;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9704813	9727206	1000	+	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1;transcript_id=HG00140_ch_T0000865;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_G0000271;transcript_name=HG00140_ch_T0000865;gene_name=TTTY2B;ID=HG00140_ch_T0000865;Name=TTTY2B
HG00140_chrY	CAT	exon	9704813	9705024	.	+	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1;transcript_id=HG00140_ch_T0000865;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000865;transcript_name=HG00140_ch_T0000865;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000865:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9705025	9710858	.	+	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1;transcript_id=HG00140_ch_T0000865;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000865;transcript_name=HG00140_ch_T0000865;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000865:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9710859	9710936	.	+	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1;transcript_id=HG00140_ch_T0000865;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000865;transcript_name=HG00140_ch_T0000865;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000865:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9710937	9712956	.	+	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1;transcript_id=HG00140_ch_T0000865;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000865;transcript_name=HG00140_ch_T0000865;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000865:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9712957	9713061	.	+	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1;transcript_id=HG00140_ch_T0000865;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000865;transcript_name=HG00140_ch_T0000865;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000865:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9713062	9713412	.	+	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1;transcript_id=HG00140_ch_T0000865;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000865;transcript_name=HG00140_ch_T0000865;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000865:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9713413	9713499	.	+	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1;transcript_id=HG00140_ch_T0000865;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000865;transcript_name=HG00140_ch_T0000865;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000865:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9713500	9720893	.	+	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1;transcript_id=HG00140_ch_T0000865;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000865;transcript_name=HG00140_ch_T0000865;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000865:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9720894	9721042	.	+	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1;transcript_id=HG00140_ch_T0000865;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000865;transcript_name=HG00140_ch_T0000865;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000865:4;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9721043	9721734	.	+	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1;transcript_id=HG00140_ch_T0000865;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000865;transcript_name=HG00140_ch_T0000865;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000865:4;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9721735	9721891	.	+	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1;transcript_id=HG00140_ch_T0000865;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000865;transcript_name=HG00140_ch_T0000865;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000865:5;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9721892	9724920	.	+	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1;transcript_id=HG00140_ch_T0000865;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000865;transcript_name=HG00140_ch_T0000865;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000865:5;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9724921	9725118	.	+	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1;transcript_id=HG00140_ch_T0000865;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000865;transcript_name=HG00140_ch_T0000865;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000865:6;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9725119	9726341	.	+	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1;transcript_id=HG00140_ch_T0000865;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000865;transcript_name=HG00140_ch_T0000865;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000865:6;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9726342	9727206	.	+	.	source_transcript=ENST00000735425.1;source_transcript_name=TTTY2B-206;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735425.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735425.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735425.1;transcript_id=HG00140_ch_T0000865;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000865;transcript_name=HG00140_ch_T0000865;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000865:7;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9704814	9727206	1000	+	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735426.1;transcript_id=HG00140_ch_T0000866;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_G0000271;transcript_name=HG00140_ch_T0000866;gene_name=TTTY2B;ID=HG00140_ch_T0000866;Name=TTTY2B
HG00140_chrY	CAT	exon	9704814	9705024	.	+	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735426.1;transcript_id=HG00140_ch_T0000866;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000866;transcript_name=HG00140_ch_T0000866;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000866:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9705025	9710858	.	+	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735426.1;transcript_id=HG00140_ch_T0000866;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000866;transcript_name=HG00140_ch_T0000866;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000866:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9710859	9710936	.	+	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735426.1;transcript_id=HG00140_ch_T0000866;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000866;transcript_name=HG00140_ch_T0000866;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000866:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9710937	9720893	.	+	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735426.1;transcript_id=HG00140_ch_T0000866;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000866;transcript_name=HG00140_ch_T0000866;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000866:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9720894	9721042	.	+	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735426.1;transcript_id=HG00140_ch_T0000866;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000866;transcript_name=HG00140_ch_T0000866;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000866:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9721043	9721734	.	+	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735426.1;transcript_id=HG00140_ch_T0000866;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000866;transcript_name=HG00140_ch_T0000866;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000866:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9721735	9721891	.	+	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735426.1;transcript_id=HG00140_ch_T0000866;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000866;transcript_name=HG00140_ch_T0000866;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000866:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9721892	9724920	.	+	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735426.1;transcript_id=HG00140_ch_T0000866;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000866;transcript_name=HG00140_ch_T0000866;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000866:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9724921	9725118	.	+	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735426.1;transcript_id=HG00140_ch_T0000866;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000866;transcript_name=HG00140_ch_T0000866;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000866:4;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9725119	9726341	.	+	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735426.1;transcript_id=HG00140_ch_T0000866;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000866;transcript_name=HG00140_ch_T0000866;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000866:4;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9726342	9727206	.	+	.	source_transcript=ENST00000735426.1;source_transcript_name=TTTY2B-207;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735426.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735426.1;transcript_id=HG00140_ch_T0000866;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000866;transcript_name=HG00140_ch_T0000866;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000866:5;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9704814	9727206	1000	+	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1;transcript_id=HG00140_ch_T0000867;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_G0000271;transcript_name=HG00140_ch_T0000867;gene_name=TTTY2B;ID=HG00140_ch_T0000867;Name=TTTY2B
HG00140_chrY	CAT	exon	9704814	9705018	.	+	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1;transcript_id=HG00140_ch_T0000867;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000867;transcript_name=HG00140_ch_T0000867;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000867:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9705019	9710858	.	+	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1;transcript_id=HG00140_ch_T0000867;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000867;transcript_name=HG00140_ch_T0000867;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000867:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9710859	9710936	.	+	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1;transcript_id=HG00140_ch_T0000867;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000867;transcript_name=HG00140_ch_T0000867;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000867:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9710937	9720893	.	+	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1;transcript_id=HG00140_ch_T0000867;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000867;transcript_name=HG00140_ch_T0000867;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000867:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9720894	9721121	.	+	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1;transcript_id=HG00140_ch_T0000867;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000867;transcript_name=HG00140_ch_T0000867;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000867:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9721122	9721734	.	+	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1;transcript_id=HG00140_ch_T0000867;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000867;transcript_name=HG00140_ch_T0000867;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000867:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9721735	9721891	.	+	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1;transcript_id=HG00140_ch_T0000867;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000867;transcript_name=HG00140_ch_T0000867;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000867:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9721892	9722412	.	+	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1;transcript_id=HG00140_ch_T0000867;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000867;transcript_name=HG00140_ch_T0000867;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000867:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9722413	9722507	.	+	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1;transcript_id=HG00140_ch_T0000867;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000867;transcript_name=HG00140_ch_T0000867;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000867:4;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9722508	9722870	.	+	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1;transcript_id=HG00140_ch_T0000867;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000867;transcript_name=HG00140_ch_T0000867;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000867:4;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9722871	9723088	.	+	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1;transcript_id=HG00140_ch_T0000867;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000867;transcript_name=HG00140_ch_T0000867;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000867:5;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9723089	9724721	.	+	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1;transcript_id=HG00140_ch_T0000867;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000867;transcript_name=HG00140_ch_T0000867;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000867:5;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9724722	9724800	.	+	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1;transcript_id=HG00140_ch_T0000867;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000867;transcript_name=HG00140_ch_T0000867;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000867:6;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9724801	9724920	.	+	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1;transcript_id=HG00140_ch_T0000867;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000867;transcript_name=HG00140_ch_T0000867;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000867:6;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9724921	9725118	.	+	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1;transcript_id=HG00140_ch_T0000867;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000867;transcript_name=HG00140_ch_T0000867;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000867:7;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9725119	9726341	.	+	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1;transcript_id=HG00140_ch_T0000867;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000867;transcript_name=HG00140_ch_T0000867;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000867:7;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9726342	9727206	.	+	.	source_transcript=ENST00000735427.1;source_transcript_name=TTTY2B-208;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735427.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735427.1;transcript_id=HG00140_ch_T0000867;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000867;transcript_name=HG00140_ch_T0000867;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000867:8;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9704826	9727206	1000	+	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1;transcript_id=HG00140_ch_T0000868;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_G0000271;transcript_name=HG00140_ch_T0000868;gene_name=TTTY2B;ID=HG00140_ch_T0000868;Name=TTTY2B
HG00140_chrY	CAT	exon	9704826	9705024	.	+	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1;transcript_id=HG00140_ch_T0000868;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000868;transcript_name=HG00140_ch_T0000868;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000868:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9705025	9710858	.	+	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1;transcript_id=HG00140_ch_T0000868;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000868;transcript_name=HG00140_ch_T0000868;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000868:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9710859	9710936	.	+	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1;transcript_id=HG00140_ch_T0000868;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000868;transcript_name=HG00140_ch_T0000868;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000868:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9710937	9713412	.	+	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1;transcript_id=HG00140_ch_T0000868;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000868;transcript_name=HG00140_ch_T0000868;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000868:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9713413	9713499	.	+	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1;transcript_id=HG00140_ch_T0000868;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000868;transcript_name=HG00140_ch_T0000868;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000868:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9713500	9720893	.	+	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1;transcript_id=HG00140_ch_T0000868;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000868;transcript_name=HG00140_ch_T0000868;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000868:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9720894	9721042	.	+	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1;transcript_id=HG00140_ch_T0000868;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000868;transcript_name=HG00140_ch_T0000868;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000868:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9721043	9721734	.	+	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1;transcript_id=HG00140_ch_T0000868;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000868;transcript_name=HG00140_ch_T0000868;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000868:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9721735	9721891	.	+	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1;transcript_id=HG00140_ch_T0000868;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000868;transcript_name=HG00140_ch_T0000868;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000868:4;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9721892	9724721	.	+	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1;transcript_id=HG00140_ch_T0000868;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000868;transcript_name=HG00140_ch_T0000868;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000868:4;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9724722	9724800	.	+	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1;transcript_id=HG00140_ch_T0000868;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000868;transcript_name=HG00140_ch_T0000868;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000868:5;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9724801	9724920	.	+	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1;transcript_id=HG00140_ch_T0000868;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000868;transcript_name=HG00140_ch_T0000868;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000868:5;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9724921	9725118	.	+	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1;transcript_id=HG00140_ch_T0000868;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000868;transcript_name=HG00140_ch_T0000868;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000868:6;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9725119	9726341	.	+	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1;transcript_id=HG00140_ch_T0000868;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000868;transcript_name=HG00140_ch_T0000868;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000868:6;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9726342	9727206	.	+	.	source_transcript=ENST00000735428.1;source_transcript_name=TTTY2B-209;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735428.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735428.1;transcript_id=HG00140_ch_T0000868;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000868;transcript_name=HG00140_ch_T0000868;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000868:7;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9704826	9727017	1000	+	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735429.1;transcript_id=HG00140_ch_T0000869;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_G0000271;transcript_name=HG00140_ch_T0000869;gene_name=TTTY2B;ID=HG00140_ch_T0000869;Name=TTTY2B
HG00140_chrY	CAT	exon	9704826	9705024	.	+	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735429.1;transcript_id=HG00140_ch_T0000869;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000869;transcript_name=HG00140_ch_T0000869;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000869:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9705025	9710858	.	+	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735429.1;transcript_id=HG00140_ch_T0000869;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000869;transcript_name=HG00140_ch_T0000869;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000869:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9710859	9710936	.	+	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735429.1;transcript_id=HG00140_ch_T0000869;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000869;transcript_name=HG00140_ch_T0000869;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000869:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9710937	9720893	.	+	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735429.1;transcript_id=HG00140_ch_T0000869;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000869;transcript_name=HG00140_ch_T0000869;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000869:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9720894	9721121	.	+	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735429.1;transcript_id=HG00140_ch_T0000869;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000869;transcript_name=HG00140_ch_T0000869;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000869:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9721122	9721734	.	+	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735429.1;transcript_id=HG00140_ch_T0000869;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000869;transcript_name=HG00140_ch_T0000869;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000869:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9721735	9721891	.	+	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735429.1;transcript_id=HG00140_ch_T0000869;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000869;transcript_name=HG00140_ch_T0000869;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000869:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9721892	9724920	.	+	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735429.1;transcript_id=HG00140_ch_T0000869;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000869;transcript_name=HG00140_ch_T0000869;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000869:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9724921	9725118	.	+	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735429.1;transcript_id=HG00140_ch_T0000869;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000869;transcript_name=HG00140_ch_T0000869;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000869:4;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9725119	9726341	.	+	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735429.1;transcript_id=HG00140_ch_T0000869;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000869;transcript_name=HG00140_ch_T0000869;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000869:4;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9726342	9727017	.	+	.	source_transcript=ENST00000735429.1;source_transcript_name=TTTY2B-210;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735429.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735429.1;transcript_id=HG00140_ch_T0000869;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000869;transcript_name=HG00140_ch_T0000869;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000869:5;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9704850	9726485	1000	+	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1;transcript_id=HG00140_ch_T0000870;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_G0000271;transcript_name=HG00140_ch_T0000870;gene_name=TTTY2B;ID=HG00140_ch_T0000870;Name=TTTY2B
HG00140_chrY	CAT	exon	9704850	9705024	.	+	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1;transcript_id=HG00140_ch_T0000870;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000870;transcript_name=HG00140_ch_T0000870;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000870:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9705025	9710858	.	+	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1;transcript_id=HG00140_ch_T0000870;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000870;transcript_name=HG00140_ch_T0000870;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000870:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9710859	9710936	.	+	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1;transcript_id=HG00140_ch_T0000870;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000870;transcript_name=HG00140_ch_T0000870;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000870:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9710937	9720893	.	+	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1;transcript_id=HG00140_ch_T0000870;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000870;transcript_name=HG00140_ch_T0000870;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000870:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9720894	9721042	.	+	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1;transcript_id=HG00140_ch_T0000870;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000870;transcript_name=HG00140_ch_T0000870;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000870:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9721043	9721734	.	+	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1;transcript_id=HG00140_ch_T0000870;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000870;transcript_name=HG00140_ch_T0000870;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000870:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9721735	9721891	.	+	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1;transcript_id=HG00140_ch_T0000870;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000870;transcript_name=HG00140_ch_T0000870;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000870:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9721892	9724721	.	+	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1;transcript_id=HG00140_ch_T0000870;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000870;transcript_name=HG00140_ch_T0000870;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000870:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9724722	9724800	.	+	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1;transcript_id=HG00140_ch_T0000870;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000870;transcript_name=HG00140_ch_T0000870;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000870:4;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9724801	9724920	.	+	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1;transcript_id=HG00140_ch_T0000870;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000870;transcript_name=HG00140_ch_T0000870;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000870:4;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9724921	9725118	.	+	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1;transcript_id=HG00140_ch_T0000870;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000870;transcript_name=HG00140_ch_T0000870;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000870:5;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9725119	9726341	.	+	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1;transcript_id=HG00140_ch_T0000870;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000870;transcript_name=HG00140_ch_T0000870;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000870:5;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9726342	9726485	.	+	.	source_transcript=ENST00000735430.1;source_transcript_name=TTTY2B-211;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735430.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735430.1;transcript_id=HG00140_ch_T0000870;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000870;transcript_name=HG00140_ch_T0000870;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000870:6;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9709119	9727021	1000	+	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=HG00140_ch_T0000871;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_G0000271;transcript_name=HG00140_ch_T0000871;gene_name=TTTY2B;ID=HG00140_ch_T0000871;Name=TTTY2B
HG00140_chrY	CAT	exon	9709119	9710936	.	+	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=HG00140_ch_T0000871;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000871;transcript_name=HG00140_ch_T0000871;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000871:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9710937	9713412	.	+	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=HG00140_ch_T0000871;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000871;transcript_name=HG00140_ch_T0000871;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000871:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9713413	9713499	.	+	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=HG00140_ch_T0000871;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000871;transcript_name=HG00140_ch_T0000871;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000871:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9713500	9720893	.	+	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=HG00140_ch_T0000871;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000871;transcript_name=HG00140_ch_T0000871;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000871:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9720894	9721042	.	+	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=HG00140_ch_T0000871;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000871;transcript_name=HG00140_ch_T0000871;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000871:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9721043	9721734	.	+	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=HG00140_ch_T0000871;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000871;transcript_name=HG00140_ch_T0000871;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000871:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9721735	9721891	.	+	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=HG00140_ch_T0000871;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000871;transcript_name=HG00140_ch_T0000871;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000871:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9721892	9724721	.	+	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=HG00140_ch_T0000871;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000871;transcript_name=HG00140_ch_T0000871;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000871:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9724722	9724800	.	+	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=HG00140_ch_T0000871;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000871;transcript_name=HG00140_ch_T0000871;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000871:4;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9724801	9724920	.	+	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=HG00140_ch_T0000871;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000871;transcript_name=HG00140_ch_T0000871;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000871:4;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9724921	9725118	.	+	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=HG00140_ch_T0000871;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000871;transcript_name=HG00140_ch_T0000871;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000871:5;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9725119	9726341	.	+	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=HG00140_ch_T0000871;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000871;transcript_name=HG00140_ch_T0000871;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000871:5;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9726342	9727021	.	+	.	source_transcript=ENST00000450591.1;source_transcript_name=TTTY2B-201;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000450591.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450591.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000450591.1,ENST00000450591.1;transcript_id=HG00140_ch_T0000871;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000871;transcript_name=HG00140_ch_T0000871;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000871:6;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9718640	9727021	1000	+	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735432.1,ENST00000735432.1;transcript_id=HG00140_ch_T0000872;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_G0000271;transcript_name=HG00140_ch_T0000872;gene_name=TTTY2B;ID=HG00140_ch_T0000872;Name=TTTY2B
HG00140_chrY	CAT	exon	9718640	9718775	.	+	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735432.1,ENST00000735432.1;transcript_id=HG00140_ch_T0000872;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000872;transcript_name=HG00140_ch_T0000872;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000872:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9718776	9720514	.	+	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735432.1,ENST00000735432.1;transcript_id=HG00140_ch_T0000872;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000872;transcript_name=HG00140_ch_T0000872;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000872:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9720515	9720601	.	+	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735432.1,ENST00000735432.1;transcript_id=HG00140_ch_T0000872;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000872;transcript_name=HG00140_ch_T0000872;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000872:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9720602	9720893	.	+	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735432.1,ENST00000735432.1;transcript_id=HG00140_ch_T0000872;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000872;transcript_name=HG00140_ch_T0000872;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000872:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9720894	9721042	.	+	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735432.1,ENST00000735432.1;transcript_id=HG00140_ch_T0000872;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000872;transcript_name=HG00140_ch_T0000872;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000872:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9721043	9721734	.	+	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735432.1,ENST00000735432.1;transcript_id=HG00140_ch_T0000872;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000872;transcript_name=HG00140_ch_T0000872;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000872:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9721735	9721891	.	+	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735432.1,ENST00000735432.1;transcript_id=HG00140_ch_T0000872;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000872;transcript_name=HG00140_ch_T0000872;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000872:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9721892	9724920	.	+	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735432.1,ENST00000735432.1;transcript_id=HG00140_ch_T0000872;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000872;transcript_name=HG00140_ch_T0000872;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000872:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9724921	9725118	.	+	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735432.1,ENST00000735432.1;transcript_id=HG00140_ch_T0000872;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000872;transcript_name=HG00140_ch_T0000872;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000872:4;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9725119	9726341	.	+	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735432.1,ENST00000735432.1;transcript_id=HG00140_ch_T0000872;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000872;transcript_name=HG00140_ch_T0000872;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000872:4;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9726342	9727021	.	+	.	source_transcript=ENST00000735432.1;source_transcript_name=TTTY2B-213;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735432.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735432.1,ENST00000735432.1;transcript_id=HG00140_ch_T0000872;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000872;transcript_name=HG00140_ch_T0000872;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000872:5;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9718645	9727206	1000	+	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=HG00140_ch_T0000873;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_G0000271;transcript_name=HG00140_ch_T0000873;gene_name=TTTY2B;ID=HG00140_ch_T0000873;Name=TTTY2B
HG00140_chrY	CAT	exon	9718645	9718781	.	+	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=HG00140_ch_T0000873;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000873;transcript_name=HG00140_ch_T0000873;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000873:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9718782	9720514	.	+	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=HG00140_ch_T0000873;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000873;transcript_name=HG00140_ch_T0000873;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000873:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9720515	9720601	.	+	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=HG00140_ch_T0000873;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000873;transcript_name=HG00140_ch_T0000873;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000873:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9720602	9720893	.	+	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=HG00140_ch_T0000873;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000873;transcript_name=HG00140_ch_T0000873;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000873:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9720894	9721042	.	+	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=HG00140_ch_T0000873;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000873;transcript_name=HG00140_ch_T0000873;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000873:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9721043	9721734	.	+	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=HG00140_ch_T0000873;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000873;transcript_name=HG00140_ch_T0000873;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000873:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9721735	9721891	.	+	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=HG00140_ch_T0000873;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000873;transcript_name=HG00140_ch_T0000873;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000873:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9721892	9722870	.	+	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=HG00140_ch_T0000873;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000873;transcript_name=HG00140_ch_T0000873;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000873:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9722871	9723088	.	+	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=HG00140_ch_T0000873;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000873;transcript_name=HG00140_ch_T0000873;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000873:4;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9723089	9724721	.	+	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=HG00140_ch_T0000873;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000873;transcript_name=HG00140_ch_T0000873;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000873:4;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9724722	9724800	.	+	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=HG00140_ch_T0000873;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000873;transcript_name=HG00140_ch_T0000873;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000873:5;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9724801	9724920	.	+	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=HG00140_ch_T0000873;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000873;transcript_name=HG00140_ch_T0000873;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000873:5;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9724921	9725118	.	+	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=HG00140_ch_T0000873;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000873;transcript_name=HG00140_ch_T0000873;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000873:6;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9725119	9726341	.	+	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=HG00140_ch_T0000873;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000873;transcript_name=HG00140_ch_T0000873;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000873:6;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9726342	9727206	.	+	.	source_transcript=ENST00000735431.1;source_transcript_name=TTTY2B-212;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735431.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735431.1,ENST00000735431.1;transcript_id=HG00140_ch_T0000873;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000873;transcript_name=HG00140_ch_T0000873;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000873:7;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9718655	9727017	1000	+	.	source_transcript=ENST00000735433.1;source_transcript_name=TTTY2B-214;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735433.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735433.1,ENST00000735433.1;transcript_id=HG00140_ch_T0000874;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_G0000271;transcript_name=HG00140_ch_T0000874;gene_name=TTTY2B;ID=HG00140_ch_T0000874;Name=TTTY2B
HG00140_chrY	CAT	exon	9718655	9718781	.	+	.	source_transcript=ENST00000735433.1;source_transcript_name=TTTY2B-214;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735433.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735433.1,ENST00000735433.1;transcript_id=HG00140_ch_T0000874;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000874;transcript_name=HG00140_ch_T0000874;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000874:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9718782	9720893	.	+	.	source_transcript=ENST00000735433.1;source_transcript_name=TTTY2B-214;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735433.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735433.1,ENST00000735433.1;transcript_id=HG00140_ch_T0000874;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000874;transcript_name=HG00140_ch_T0000874;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000874:0;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9720894	9721042	.	+	.	source_transcript=ENST00000735433.1;source_transcript_name=TTTY2B-214;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735433.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735433.1,ENST00000735433.1;transcript_id=HG00140_ch_T0000874;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000874;transcript_name=HG00140_ch_T0000874;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000874:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9721043	9721734	.	+	.	source_transcript=ENST00000735433.1;source_transcript_name=TTTY2B-214;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735433.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735433.1,ENST00000735433.1;transcript_id=HG00140_ch_T0000874;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000874;transcript_name=HG00140_ch_T0000874;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000874:1;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9721735	9721891	.	+	.	source_transcript=ENST00000735433.1;source_transcript_name=TTTY2B-214;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735433.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735433.1,ENST00000735433.1;transcript_id=HG00140_ch_T0000874;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000874;transcript_name=HG00140_ch_T0000874;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000874:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9721892	9724920	.	+	.	source_transcript=ENST00000735433.1;source_transcript_name=TTTY2B-214;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735433.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735433.1,ENST00000735433.1;transcript_id=HG00140_ch_T0000874;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000874;transcript_name=HG00140_ch_T0000874;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000874:2;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9724921	9725118	.	+	.	source_transcript=ENST00000735433.1;source_transcript_name=TTTY2B-214;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735433.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735433.1,ENST00000735433.1;transcript_id=HG00140_ch_T0000874;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000874;transcript_name=HG00140_ch_T0000874;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000874:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9725119	9726341	.	+	.	source_transcript=ENST00000735433.1;source_transcript_name=TTTY2B-214;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735433.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735433.1,ENST00000735433.1;transcript_id=HG00140_ch_T0000874;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000874;transcript_name=HG00140_ch_T0000874;gene_name=TTTY2B;ID=intron:HG00140_ch_T0000874:3;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9726342	9727017	.	+	.	source_transcript=ENST00000735433.1;source_transcript_name=TTTY2B-214;source_gene=ENSG00000212856.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000212856.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735433.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=ENST00000735433.1,ENST00000735433.1;transcript_id=HG00140_ch_T0000874;gene_id=HG00140_ch_G0000271;Parent=HG00140_ch_T0000874;transcript_name=HG00140_ch_T0000874;gene_name=TTTY2B;ID=exon:HG00140_ch_T0000874:4;Name=TTTY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	9675358	9692398	.	-	.	source_gene_common_name=TTTY7;source_gene=ENSG00000147753.11;alternative_source_transcripts=ENST00000276770.8;gene_id=HG00140_ch_G0000272;gene_biotype=lncRNA;gene_name=TTTY7;gene_sources=liftoff;ID=HG00140_ch_G0000272;Name=TTTY7
HG00140_chrY	CAT	transcript	9675358	9683796	1000	-	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8;transcript_id=HG00140_ch_T0000843;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_G0000272;transcript_name=HG00140_ch_T0000843;gene_name=TTTY7;ID=HG00140_ch_T0000843;Name=TTTY7
HG00140_chrY	CAT	exon	9675358	9675603	.	-	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8;transcript_id=HG00140_ch_T0000843;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000843;transcript_name=HG00140_ch_T0000843;gene_name=TTTY7;ID=exon:HG00140_ch_T0000843:0;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9675604	9675849	.	-	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8;transcript_id=HG00140_ch_T0000843;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000843;transcript_name=HG00140_ch_T0000843;gene_name=TTTY7;ID=intron:HG00140_ch_T0000843:0;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9675850	9676105	.	-	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8;transcript_id=HG00140_ch_T0000843;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000843;transcript_name=HG00140_ch_T0000843;gene_name=TTTY7;ID=exon:HG00140_ch_T0000843:1;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9676106	9677078	.	-	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8;transcript_id=HG00140_ch_T0000843;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000843;transcript_name=HG00140_ch_T0000843;gene_name=TTTY7;ID=intron:HG00140_ch_T0000843:1;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9677079	9677192	.	-	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8;transcript_id=HG00140_ch_T0000843;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000843;transcript_name=HG00140_ch_T0000843;gene_name=TTTY7;ID=exon:HG00140_ch_T0000843:2;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9677193	9679109	.	-	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8;transcript_id=HG00140_ch_T0000843;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000843;transcript_name=HG00140_ch_T0000843;gene_name=TTTY7;ID=intron:HG00140_ch_T0000843:2;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9679110	9679586	.	-	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8;transcript_id=HG00140_ch_T0000843;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000843;transcript_name=HG00140_ch_T0000843;gene_name=TTTY7;ID=exon:HG00140_ch_T0000843:3;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9679587	9680274	.	-	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8;transcript_id=HG00140_ch_T0000843;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000843;transcript_name=HG00140_ch_T0000843;gene_name=TTTY7;ID=intron:HG00140_ch_T0000843:3;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9680275	9680349	.	-	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8;transcript_id=HG00140_ch_T0000843;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000843;transcript_name=HG00140_ch_T0000843;gene_name=TTTY7;ID=exon:HG00140_ch_T0000843:4;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9680350	9682656	.	-	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8;transcript_id=HG00140_ch_T0000843;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000843;transcript_name=HG00140_ch_T0000843;gene_name=TTTY7;ID=intron:HG00140_ch_T0000843:4;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9682657	9682818	.	-	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8;transcript_id=HG00140_ch_T0000843;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000843;transcript_name=HG00140_ch_T0000843;gene_name=TTTY7;ID=exon:HG00140_ch_T0000843:5;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9682819	9683759	.	-	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8;transcript_id=HG00140_ch_T0000843;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000843;transcript_name=HG00140_ch_T0000843;gene_name=TTTY7;ID=intron:HG00140_ch_T0000843:5;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9683760	9683796	.	-	.	source_transcript=ENST00000276770.8;source_transcript_name=TTTY7-201;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000276770.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000276770.8;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000276770.8;transcript_id=HG00140_ch_T0000843;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000843;transcript_name=HG00140_ch_T0000843;gene_name=TTTY7;ID=exon:HG00140_ch_T0000843:6;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9675358	9679359	1000	-	.	source_transcript=ENST00000449828.1;source_transcript_name=TTTY7-203;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449828.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000449828.1;transcript_id=HG00140_ch_T0000844;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_G0000272;transcript_name=HG00140_ch_T0000844;gene_name=TTTY7;ID=HG00140_ch_T0000844;Name=TTTY7
HG00140_chrY	CAT	exon	9675358	9675603	.	-	.	source_transcript=ENST00000449828.1;source_transcript_name=TTTY7-203;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449828.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000449828.1;transcript_id=HG00140_ch_T0000844;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000844;transcript_name=HG00140_ch_T0000844;gene_name=TTTY7;ID=exon:HG00140_ch_T0000844:0;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9675604	9677078	.	-	.	source_transcript=ENST00000449828.1;source_transcript_name=TTTY7-203;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449828.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000449828.1;transcript_id=HG00140_ch_T0000844;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000844;transcript_name=HG00140_ch_T0000844;gene_name=TTTY7;ID=intron:HG00140_ch_T0000844:0;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9677079	9677291	.	-	.	source_transcript=ENST00000449828.1;source_transcript_name=TTTY7-203;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449828.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000449828.1;transcript_id=HG00140_ch_T0000844;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000844;transcript_name=HG00140_ch_T0000844;gene_name=TTTY7;ID=exon:HG00140_ch_T0000844:1;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9677292	9679109	.	-	.	source_transcript=ENST00000449828.1;source_transcript_name=TTTY7-203;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449828.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000449828.1;transcript_id=HG00140_ch_T0000844;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000844;transcript_name=HG00140_ch_T0000844;gene_name=TTTY7;ID=intron:HG00140_ch_T0000844:1;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9679110	9679359	.	-	.	source_transcript=ENST00000449828.1;source_transcript_name=TTTY7-203;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000449828.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449828.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000449828.1;transcript_id=HG00140_ch_T0000844;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000844;transcript_name=HG00140_ch_T0000844;gene_name=TTTY7;ID=exon:HG00140_ch_T0000844:2;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9675358	9683796	1000	-	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5;transcript_id=HG00140_ch_T0000845;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_G0000272;transcript_name=HG00140_ch_T0000845;gene_name=TTTY7;ID=HG00140_ch_T0000845;Name=TTTY7
HG00140_chrY	CAT	exon	9675358	9675603	.	-	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5;transcript_id=HG00140_ch_T0000845;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000845;transcript_name=HG00140_ch_T0000845;gene_name=TTTY7;ID=exon:HG00140_ch_T0000845:0;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9675604	9677078	.	-	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5;transcript_id=HG00140_ch_T0000845;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000845;transcript_name=HG00140_ch_T0000845;gene_name=TTTY7;ID=intron:HG00140_ch_T0000845:0;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9677079	9677192	.	-	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5;transcript_id=HG00140_ch_T0000845;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000845;transcript_name=HG00140_ch_T0000845;gene_name=TTTY7;ID=exon:HG00140_ch_T0000845:1;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9677193	9679109	.	-	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5;transcript_id=HG00140_ch_T0000845;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000845;transcript_name=HG00140_ch_T0000845;gene_name=TTTY7;ID=intron:HG00140_ch_T0000845:1;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9679110	9679586	.	-	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5;transcript_id=HG00140_ch_T0000845;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000845;transcript_name=HG00140_ch_T0000845;gene_name=TTTY7;ID=exon:HG00140_ch_T0000845:2;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9679587	9680274	.	-	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5;transcript_id=HG00140_ch_T0000845;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000845;transcript_name=HG00140_ch_T0000845;gene_name=TTTY7;ID=intron:HG00140_ch_T0000845:2;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9680275	9680349	.	-	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5;transcript_id=HG00140_ch_T0000845;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000845;transcript_name=HG00140_ch_T0000845;gene_name=TTTY7;ID=exon:HG00140_ch_T0000845:3;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9680350	9682656	.	-	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5;transcript_id=HG00140_ch_T0000845;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000845;transcript_name=HG00140_ch_T0000845;gene_name=TTTY7;ID=intron:HG00140_ch_T0000845:3;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9682657	9682818	.	-	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5;transcript_id=HG00140_ch_T0000845;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000845;transcript_name=HG00140_ch_T0000845;gene_name=TTTY7;ID=exon:HG00140_ch_T0000845:4;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9682819	9683759	.	-	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5;transcript_id=HG00140_ch_T0000845;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000845;transcript_name=HG00140_ch_T0000845;gene_name=TTTY7;ID=intron:HG00140_ch_T0000845:4;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9683760	9683796	.	-	.	source_transcript=ENST00000457100.5;source_transcript_name=TTTY7-204;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000457100.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000457100.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000457100.5;transcript_id=HG00140_ch_T0000845;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000845;transcript_name=HG00140_ch_T0000845;gene_name=TTTY7;ID=exon:HG00140_ch_T0000845:5;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9675358	9689919	1000	-	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1;transcript_id=HG00140_ch_T0000846;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_G0000272;transcript_name=HG00140_ch_T0000846;gene_name=TTTY7;ID=HG00140_ch_T0000846;Name=TTTY7
HG00140_chrY	CAT	exon	9675358	9675603	.	-	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1;transcript_id=HG00140_ch_T0000846;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000846;transcript_name=HG00140_ch_T0000846;gene_name=TTTY7;ID=exon:HG00140_ch_T0000846:0;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9675604	9677078	.	-	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1;transcript_id=HG00140_ch_T0000846;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000846;transcript_name=HG00140_ch_T0000846;gene_name=TTTY7;ID=intron:HG00140_ch_T0000846:0;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9677079	9677192	.	-	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1;transcript_id=HG00140_ch_T0000846;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000846;transcript_name=HG00140_ch_T0000846;gene_name=TTTY7;ID=exon:HG00140_ch_T0000846:1;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9677193	9680274	.	-	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1;transcript_id=HG00140_ch_T0000846;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000846;transcript_name=HG00140_ch_T0000846;gene_name=TTTY7;ID=intron:HG00140_ch_T0000846:1;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9680275	9680436	.	-	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1;transcript_id=HG00140_ch_T0000846;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000846;transcript_name=HG00140_ch_T0000846;gene_name=TTTY7;ID=exon:HG00140_ch_T0000846:2;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9680437	9682656	.	-	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1;transcript_id=HG00140_ch_T0000846;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000846;transcript_name=HG00140_ch_T0000846;gene_name=TTTY7;ID=intron:HG00140_ch_T0000846:2;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9682657	9682738	.	-	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1;transcript_id=HG00140_ch_T0000846;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000846;transcript_name=HG00140_ch_T0000846;gene_name=TTTY7;ID=exon:HG00140_ch_T0000846:3;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9682739	9688346	.	-	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1;transcript_id=HG00140_ch_T0000846;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000846;transcript_name=HG00140_ch_T0000846;gene_name=TTTY7;ID=intron:HG00140_ch_T0000846:3;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9688347	9688504	.	-	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1;transcript_id=HG00140_ch_T0000846;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000846;transcript_name=HG00140_ch_T0000846;gene_name=TTTY7;ID=exon:HG00140_ch_T0000846:4;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9688505	9689628	.	-	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1;transcript_id=HG00140_ch_T0000846;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000846;transcript_name=HG00140_ch_T0000846;gene_name=TTTY7;ID=intron:HG00140_ch_T0000846:4;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9689629	9689919	.	-	.	source_transcript=ENST00000715683.1;source_transcript_name=TTTY7-205;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000715683.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000715683.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000715683.1;transcript_id=HG00140_ch_T0000846;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000846;transcript_name=HG00140_ch_T0000846;gene_name=TTTY7;ID=exon:HG00140_ch_T0000846:5;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9675358	9689919	1000	-	.	source_transcript=ENST00000735955.1;source_transcript_name=TTTY7-206;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735955.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735955.1;transcript_id=HG00140_ch_T0000847;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_G0000272;transcript_name=HG00140_ch_T0000847;gene_name=TTTY7;ID=HG00140_ch_T0000847;Name=TTTY7
HG00140_chrY	CAT	exon	9675358	9675603	.	-	.	source_transcript=ENST00000735955.1;source_transcript_name=TTTY7-206;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735955.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735955.1;transcript_id=HG00140_ch_T0000847;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000847;transcript_name=HG00140_ch_T0000847;gene_name=TTTY7;ID=exon:HG00140_ch_T0000847:0;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9675604	9677078	.	-	.	source_transcript=ENST00000735955.1;source_transcript_name=TTTY7-206;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735955.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735955.1;transcript_id=HG00140_ch_T0000847;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000847;transcript_name=HG00140_ch_T0000847;gene_name=TTTY7;ID=intron:HG00140_ch_T0000847:0;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9677079	9677192	.	-	.	source_transcript=ENST00000735955.1;source_transcript_name=TTTY7-206;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735955.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735955.1;transcript_id=HG00140_ch_T0000847;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000847;transcript_name=HG00140_ch_T0000847;gene_name=TTTY7;ID=exon:HG00140_ch_T0000847:1;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9677193	9680274	.	-	.	source_transcript=ENST00000735955.1;source_transcript_name=TTTY7-206;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735955.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735955.1;transcript_id=HG00140_ch_T0000847;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000847;transcript_name=HG00140_ch_T0000847;gene_name=TTTY7;ID=intron:HG00140_ch_T0000847:1;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9680275	9680436	.	-	.	source_transcript=ENST00000735955.1;source_transcript_name=TTTY7-206;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735955.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735955.1;transcript_id=HG00140_ch_T0000847;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000847;transcript_name=HG00140_ch_T0000847;gene_name=TTTY7;ID=exon:HG00140_ch_T0000847:2;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9680437	9682656	.	-	.	source_transcript=ENST00000735955.1;source_transcript_name=TTTY7-206;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735955.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735955.1;transcript_id=HG00140_ch_T0000847;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000847;transcript_name=HG00140_ch_T0000847;gene_name=TTTY7;ID=intron:HG00140_ch_T0000847:2;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9682657	9682738	.	-	.	source_transcript=ENST00000735955.1;source_transcript_name=TTTY7-206;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735955.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735955.1;transcript_id=HG00140_ch_T0000847;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000847;transcript_name=HG00140_ch_T0000847;gene_name=TTTY7;ID=exon:HG00140_ch_T0000847:3;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9682739	9689628	.	-	.	source_transcript=ENST00000735955.1;source_transcript_name=TTTY7-206;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735955.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735955.1;transcript_id=HG00140_ch_T0000847;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000847;transcript_name=HG00140_ch_T0000847;gene_name=TTTY7;ID=intron:HG00140_ch_T0000847:3;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9689629	9689919	.	-	.	source_transcript=ENST00000735955.1;source_transcript_name=TTTY7-206;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735955.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735955.1;transcript_id=HG00140_ch_T0000847;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000847;transcript_name=HG00140_ch_T0000847;gene_name=TTTY7;ID=exon:HG00140_ch_T0000847:4;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9675358	9679378	1000	-	.	source_transcript=ENST00000735965.1;source_transcript_name=TTTY7-216;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735965.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735965.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735965.1;transcript_id=HG00140_ch_T0000848;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_G0000272;transcript_name=HG00140_ch_T0000848;gene_name=TTTY7;ID=HG00140_ch_T0000848;Name=TTTY7
HG00140_chrY	CAT	exon	9675358	9675603	.	-	.	source_transcript=ENST00000735965.1;source_transcript_name=TTTY7-216;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735965.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735965.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735965.1;transcript_id=HG00140_ch_T0000848;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000848;transcript_name=HG00140_ch_T0000848;gene_name=TTTY7;ID=exon:HG00140_ch_T0000848:0;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9675604	9679109	.	-	.	source_transcript=ENST00000735965.1;source_transcript_name=TTTY7-216;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735965.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735965.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735965.1;transcript_id=HG00140_ch_T0000848;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000848;transcript_name=HG00140_ch_T0000848;gene_name=TTTY7;ID=intron:HG00140_ch_T0000848:0;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9679110	9679378	.	-	.	source_transcript=ENST00000735965.1;source_transcript_name=TTTY7-216;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735965.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735965.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735965.1;transcript_id=HG00140_ch_T0000848;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000848;transcript_name=HG00140_ch_T0000848;gene_name=TTTY7;ID=exon:HG00140_ch_T0000848:1;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9675358	9678196	1000	-	.	source_transcript=ENST00000735966.1;source_transcript_name=TTTY7-217;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735966.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735966.1;transcript_id=HG00140_ch_T0000849;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_G0000272;transcript_name=HG00140_ch_T0000849;gene_name=TTTY7;ID=HG00140_ch_T0000849;Name=TTTY7
HG00140_chrY	CAT	exon	9675358	9675603	.	-	.	source_transcript=ENST00000735966.1;source_transcript_name=TTTY7-217;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735966.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735966.1;transcript_id=HG00140_ch_T0000849;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000849;transcript_name=HG00140_ch_T0000849;gene_name=TTTY7;ID=exon:HG00140_ch_T0000849:0;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9675604	9675849	.	-	.	source_transcript=ENST00000735966.1;source_transcript_name=TTTY7-217;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735966.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735966.1;transcript_id=HG00140_ch_T0000849;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000849;transcript_name=HG00140_ch_T0000849;gene_name=TTTY7;ID=intron:HG00140_ch_T0000849:0;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9675850	9676105	.	-	.	source_transcript=ENST00000735966.1;source_transcript_name=TTTY7-217;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735966.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735966.1;transcript_id=HG00140_ch_T0000849;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000849;transcript_name=HG00140_ch_T0000849;gene_name=TTTY7;ID=exon:HG00140_ch_T0000849:1;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9676106	9677078	.	-	.	source_transcript=ENST00000735966.1;source_transcript_name=TTTY7-217;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735966.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735966.1;transcript_id=HG00140_ch_T0000849;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000849;transcript_name=HG00140_ch_T0000849;gene_name=TTTY7;ID=intron:HG00140_ch_T0000849:1;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9677079	9677192	.	-	.	source_transcript=ENST00000735966.1;source_transcript_name=TTTY7-217;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735966.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735966.1;transcript_id=HG00140_ch_T0000849;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000849;transcript_name=HG00140_ch_T0000849;gene_name=TTTY7;ID=exon:HG00140_ch_T0000849:2;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9677193	9677832	.	-	.	source_transcript=ENST00000735966.1;source_transcript_name=TTTY7-217;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735966.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735966.1;transcript_id=HG00140_ch_T0000849;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000849;transcript_name=HG00140_ch_T0000849;gene_name=TTTY7;ID=intron:HG00140_ch_T0000849:2;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9677833	9678196	.	-	.	source_transcript=ENST00000735966.1;source_transcript_name=TTTY7-217;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735966.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735966.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735966.1;transcript_id=HG00140_ch_T0000849;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000849;transcript_name=HG00140_ch_T0000849;gene_name=TTTY7;ID=exon:HG00140_ch_T0000849:3;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9675361	9689894	1000	-	.	source_transcript=ENST00000735956.1;source_transcript_name=TTTY7-207;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735956.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735956.1;transcript_id=HG00140_ch_T0000850;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_G0000272;transcript_name=HG00140_ch_T0000850;gene_name=TTTY7;ID=HG00140_ch_T0000850;Name=TTTY7
HG00140_chrY	CAT	exon	9675361	9675603	.	-	.	source_transcript=ENST00000735956.1;source_transcript_name=TTTY7-207;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735956.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735956.1;transcript_id=HG00140_ch_T0000850;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000850;transcript_name=HG00140_ch_T0000850;gene_name=TTTY7;ID=exon:HG00140_ch_T0000850:0;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9675604	9677078	.	-	.	source_transcript=ENST00000735956.1;source_transcript_name=TTTY7-207;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735956.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735956.1;transcript_id=HG00140_ch_T0000850;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000850;transcript_name=HG00140_ch_T0000850;gene_name=TTTY7;ID=intron:HG00140_ch_T0000850:0;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9677079	9677192	.	-	.	source_transcript=ENST00000735956.1;source_transcript_name=TTTY7-207;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735956.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735956.1;transcript_id=HG00140_ch_T0000850;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000850;transcript_name=HG00140_ch_T0000850;gene_name=TTTY7;ID=exon:HG00140_ch_T0000850:1;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9677193	9680274	.	-	.	source_transcript=ENST00000735956.1;source_transcript_name=TTTY7-207;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735956.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735956.1;transcript_id=HG00140_ch_T0000850;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000850;transcript_name=HG00140_ch_T0000850;gene_name=TTTY7;ID=intron:HG00140_ch_T0000850:1;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9680275	9680349	.	-	.	source_transcript=ENST00000735956.1;source_transcript_name=TTTY7-207;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735956.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735956.1;transcript_id=HG00140_ch_T0000850;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000850;transcript_name=HG00140_ch_T0000850;gene_name=TTTY7;ID=exon:HG00140_ch_T0000850:2;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9680350	9682656	.	-	.	source_transcript=ENST00000735956.1;source_transcript_name=TTTY7-207;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735956.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735956.1;transcript_id=HG00140_ch_T0000850;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000850;transcript_name=HG00140_ch_T0000850;gene_name=TTTY7;ID=intron:HG00140_ch_T0000850:2;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9682657	9682738	.	-	.	source_transcript=ENST00000735956.1;source_transcript_name=TTTY7-207;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735956.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735956.1;transcript_id=HG00140_ch_T0000850;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000850;transcript_name=HG00140_ch_T0000850;gene_name=TTTY7;ID=exon:HG00140_ch_T0000850:3;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9682739	9689628	.	-	.	source_transcript=ENST00000735956.1;source_transcript_name=TTTY7-207;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735956.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735956.1;transcript_id=HG00140_ch_T0000850;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000850;transcript_name=HG00140_ch_T0000850;gene_name=TTTY7;ID=intron:HG00140_ch_T0000850:3;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9689629	9689894	.	-	.	source_transcript=ENST00000735956.1;source_transcript_name=TTTY7-207;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735956.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735956.1;transcript_id=HG00140_ch_T0000850;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000850;transcript_name=HG00140_ch_T0000850;gene_name=TTTY7;ID=exon:HG00140_ch_T0000850:4;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9675368	9678196	1000	-	.	source_transcript=ENST00000735967.1;source_transcript_name=TTTY7-218;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735967.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735967.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735967.1;transcript_id=HG00140_ch_T0000851;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_G0000272;transcript_name=HG00140_ch_T0000851;gene_name=TTTY7;ID=HG00140_ch_T0000851;Name=TTTY7
HG00140_chrY	CAT	exon	9675368	9675603	.	-	.	source_transcript=ENST00000735967.1;source_transcript_name=TTTY7-218;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735967.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735967.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735967.1;transcript_id=HG00140_ch_T0000851;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000851;transcript_name=HG00140_ch_T0000851;gene_name=TTTY7;ID=exon:HG00140_ch_T0000851:0;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9675604	9677078	.	-	.	source_transcript=ENST00000735967.1;source_transcript_name=TTTY7-218;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735967.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735967.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735967.1;transcript_id=HG00140_ch_T0000851;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000851;transcript_name=HG00140_ch_T0000851;gene_name=TTTY7;ID=intron:HG00140_ch_T0000851:0;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9677079	9677192	.	-	.	source_transcript=ENST00000735967.1;source_transcript_name=TTTY7-218;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735967.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735967.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735967.1;transcript_id=HG00140_ch_T0000851;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000851;transcript_name=HG00140_ch_T0000851;gene_name=TTTY7;ID=exon:HG00140_ch_T0000851:1;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9677193	9677832	.	-	.	source_transcript=ENST00000735967.1;source_transcript_name=TTTY7-218;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735967.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735967.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735967.1;transcript_id=HG00140_ch_T0000851;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000851;transcript_name=HG00140_ch_T0000851;gene_name=TTTY7;ID=intron:HG00140_ch_T0000851:1;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9677833	9678196	.	-	.	source_transcript=ENST00000735967.1;source_transcript_name=TTTY7-218;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735967.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735967.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735967.1;transcript_id=HG00140_ch_T0000851;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000851;transcript_name=HG00140_ch_T0000851;gene_name=TTTY7;ID=exon:HG00140_ch_T0000851:2;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9682567	9689941	1000	-	.	source_transcript=ENST00000735958.1;source_transcript_name=TTTY7-209;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735958.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735958.1;transcript_id=HG00140_ch_T0000853;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_G0000272;transcript_name=HG00140_ch_T0000853;gene_name=TTTY7;ID=HG00140_ch_T0000853;Name=TTTY7
HG00140_chrY	CAT	exon	9682567	9682738	.	-	.	source_transcript=ENST00000735958.1;source_transcript_name=TTTY7-209;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735958.1;transcript_id=HG00140_ch_T0000853;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000853;transcript_name=HG00140_ch_T0000853;gene_name=TTTY7;ID=exon:HG00140_ch_T0000853:0;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9682739	9688346	.	-	.	source_transcript=ENST00000735958.1;source_transcript_name=TTTY7-209;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735958.1;transcript_id=HG00140_ch_T0000853;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000853;transcript_name=HG00140_ch_T0000853;gene_name=TTTY7;ID=intron:HG00140_ch_T0000853:0;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9688347	9688504	.	-	.	source_transcript=ENST00000735958.1;source_transcript_name=TTTY7-209;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735958.1;transcript_id=HG00140_ch_T0000853;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000853;transcript_name=HG00140_ch_T0000853;gene_name=TTTY7;ID=exon:HG00140_ch_T0000853:1;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9688505	9689628	.	-	.	source_transcript=ENST00000735958.1;source_transcript_name=TTTY7-209;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735958.1;transcript_id=HG00140_ch_T0000853;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000853;transcript_name=HG00140_ch_T0000853;gene_name=TTTY7;ID=intron:HG00140_ch_T0000853:1;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9689629	9689941	.	-	.	source_transcript=ENST00000735958.1;source_transcript_name=TTTY7-209;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735958.1;transcript_id=HG00140_ch_T0000853;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000853;transcript_name=HG00140_ch_T0000853;gene_name=TTTY7;ID=exon:HG00140_ch_T0000853:2;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9682568	9689920	1000	-	.	source_transcript=ENST00000735959.1;source_transcript_name=TTTY7-210;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735959.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735959.1;transcript_id=HG00140_ch_T0000854;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_G0000272;transcript_name=HG00140_ch_T0000854;gene_name=TTTY7;ID=HG00140_ch_T0000854;Name=TTTY7
HG00140_chrY	CAT	exon	9682568	9682738	.	-	.	source_transcript=ENST00000735959.1;source_transcript_name=TTTY7-210;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735959.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735959.1;transcript_id=HG00140_ch_T0000854;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000854;transcript_name=HG00140_ch_T0000854;gene_name=TTTY7;ID=exon:HG00140_ch_T0000854:0;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9682739	9689628	.	-	.	source_transcript=ENST00000735959.1;source_transcript_name=TTTY7-210;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735959.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735959.1;transcript_id=HG00140_ch_T0000854;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000854;transcript_name=HG00140_ch_T0000854;gene_name=TTTY7;ID=intron:HG00140_ch_T0000854:0;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9689629	9689920	.	-	.	source_transcript=ENST00000735959.1;source_transcript_name=TTTY7-210;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735959.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735959.1;transcript_id=HG00140_ch_T0000854;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000854;transcript_name=HG00140_ch_T0000854;gene_name=TTTY7;ID=exon:HG00140_ch_T0000854:1;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9682568	9689919	1000	-	.	source_transcript=ENST00000735960.1;source_transcript_name=TTTY7-211;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735960.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735960.1;transcript_id=HG00140_ch_T0000855;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_G0000272;transcript_name=HG00140_ch_T0000855;gene_name=TTTY7;ID=HG00140_ch_T0000855;Name=TTTY7
HG00140_chrY	CAT	exon	9682568	9682738	.	-	.	source_transcript=ENST00000735960.1;source_transcript_name=TTTY7-211;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735960.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735960.1;transcript_id=HG00140_ch_T0000855;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000855;transcript_name=HG00140_ch_T0000855;gene_name=TTTY7;ID=exon:HG00140_ch_T0000855:0;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9682739	9685654	.	-	.	source_transcript=ENST00000735960.1;source_transcript_name=TTTY7-211;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735960.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735960.1;transcript_id=HG00140_ch_T0000855;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000855;transcript_name=HG00140_ch_T0000855;gene_name=TTTY7;ID=intron:HG00140_ch_T0000855:0;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9685655	9685761	.	-	.	source_transcript=ENST00000735960.1;source_transcript_name=TTTY7-211;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735960.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735960.1;transcript_id=HG00140_ch_T0000855;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000855;transcript_name=HG00140_ch_T0000855;gene_name=TTTY7;ID=exon:HG00140_ch_T0000855:1;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9685762	9686157	.	-	.	source_transcript=ENST00000735960.1;source_transcript_name=TTTY7-211;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735960.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735960.1;transcript_id=HG00140_ch_T0000855;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000855;transcript_name=HG00140_ch_T0000855;gene_name=TTTY7;ID=intron:HG00140_ch_T0000855:1;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9686158	9686291	.	-	.	source_transcript=ENST00000735960.1;source_transcript_name=TTTY7-211;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735960.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735960.1;transcript_id=HG00140_ch_T0000855;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000855;transcript_name=HG00140_ch_T0000855;gene_name=TTTY7;ID=exon:HG00140_ch_T0000855:2;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9686292	9688346	.	-	.	source_transcript=ENST00000735960.1;source_transcript_name=TTTY7-211;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735960.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735960.1;transcript_id=HG00140_ch_T0000855;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000855;transcript_name=HG00140_ch_T0000855;gene_name=TTTY7;ID=intron:HG00140_ch_T0000855:2;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9688347	9688504	.	-	.	source_transcript=ENST00000735960.1;source_transcript_name=TTTY7-211;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735960.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735960.1;transcript_id=HG00140_ch_T0000855;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000855;transcript_name=HG00140_ch_T0000855;gene_name=TTTY7;ID=exon:HG00140_ch_T0000855:3;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9688505	9689628	.	-	.	source_transcript=ENST00000735960.1;source_transcript_name=TTTY7-211;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735960.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735960.1;transcript_id=HG00140_ch_T0000855;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000855;transcript_name=HG00140_ch_T0000855;gene_name=TTTY7;ID=intron:HG00140_ch_T0000855:3;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9689629	9689919	.	-	.	source_transcript=ENST00000735960.1;source_transcript_name=TTTY7-211;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735960.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735960.1;transcript_id=HG00140_ch_T0000855;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000855;transcript_name=HG00140_ch_T0000855;gene_name=TTTY7;ID=exon:HG00140_ch_T0000855:4;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9682569	9689916	1000	-	.	source_transcript=ENST00000735961.1;source_transcript_name=TTTY7-212;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735961.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735961.1;transcript_id=HG00140_ch_T0000856;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_G0000272;transcript_name=HG00140_ch_T0000856;gene_name=TTTY7;ID=HG00140_ch_T0000856;Name=TTTY7
HG00140_chrY	CAT	exon	9682569	9682738	.	-	.	source_transcript=ENST00000735961.1;source_transcript_name=TTTY7-212;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735961.1;transcript_id=HG00140_ch_T0000856;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000856;transcript_name=HG00140_ch_T0000856;gene_name=TTTY7;ID=exon:HG00140_ch_T0000856:0;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9682739	9685654	.	-	.	source_transcript=ENST00000735961.1;source_transcript_name=TTTY7-212;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735961.1;transcript_id=HG00140_ch_T0000856;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000856;transcript_name=HG00140_ch_T0000856;gene_name=TTTY7;ID=intron:HG00140_ch_T0000856:0;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9685655	9685761	.	-	.	source_transcript=ENST00000735961.1;source_transcript_name=TTTY7-212;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735961.1;transcript_id=HG00140_ch_T0000856;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000856;transcript_name=HG00140_ch_T0000856;gene_name=TTTY7;ID=exon:HG00140_ch_T0000856:1;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9685762	9686157	.	-	.	source_transcript=ENST00000735961.1;source_transcript_name=TTTY7-212;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735961.1;transcript_id=HG00140_ch_T0000856;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000856;transcript_name=HG00140_ch_T0000856;gene_name=TTTY7;ID=intron:HG00140_ch_T0000856:1;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9686158	9686291	.	-	.	source_transcript=ENST00000735961.1;source_transcript_name=TTTY7-212;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735961.1;transcript_id=HG00140_ch_T0000856;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000856;transcript_name=HG00140_ch_T0000856;gene_name=TTTY7;ID=exon:HG00140_ch_T0000856:2;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9686292	9689628	.	-	.	source_transcript=ENST00000735961.1;source_transcript_name=TTTY7-212;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735961.1;transcript_id=HG00140_ch_T0000856;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000856;transcript_name=HG00140_ch_T0000856;gene_name=TTTY7;ID=intron:HG00140_ch_T0000856:2;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9689629	9689916	.	-	.	source_transcript=ENST00000735961.1;source_transcript_name=TTTY7-212;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735961.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735961.1;transcript_id=HG00140_ch_T0000856;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000856;transcript_name=HG00140_ch_T0000856;gene_name=TTTY7;ID=exon:HG00140_ch_T0000856:3;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9682569	9687511	1000	-	.	source_transcript=ENST00000735964.1;source_transcript_name=TTTY7-215;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735964.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735964.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735964.1;transcript_id=HG00140_ch_T0000857;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_G0000272;transcript_name=HG00140_ch_T0000857;gene_name=TTTY7;ID=HG00140_ch_T0000857;Name=TTTY7
HG00140_chrY	CAT	exon	9682569	9682738	.	-	.	source_transcript=ENST00000735964.1;source_transcript_name=TTTY7-215;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735964.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735964.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735964.1;transcript_id=HG00140_ch_T0000857;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000857;transcript_name=HG00140_ch_T0000857;gene_name=TTTY7;ID=exon:HG00140_ch_T0000857:0;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9682739	9687211	.	-	.	source_transcript=ENST00000735964.1;source_transcript_name=TTTY7-215;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735964.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735964.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735964.1;transcript_id=HG00140_ch_T0000857;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000857;transcript_name=HG00140_ch_T0000857;gene_name=TTTY7;ID=intron:HG00140_ch_T0000857:0;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9687212	9687511	.	-	.	source_transcript=ENST00000735964.1;source_transcript_name=TTTY7-215;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735964.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735964.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735964.1;transcript_id=HG00140_ch_T0000857;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000857;transcript_name=HG00140_ch_T0000857;gene_name=TTTY7;ID=exon:HG00140_ch_T0000857:1;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9682570	9689916	1000	-	.	source_transcript=ENST00000421353.3;source_transcript_name=TTTY7-202;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421353.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421353.3;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000421353.3;transcript_id=HG00140_ch_T0000858;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_G0000272;transcript_name=HG00140_ch_T0000858;gene_name=TTTY7;ID=HG00140_ch_T0000858;Name=TTTY7
HG00140_chrY	CAT	exon	9682570	9682738	.	-	.	source_transcript=ENST00000421353.3;source_transcript_name=TTTY7-202;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421353.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421353.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000421353.3;transcript_id=HG00140_ch_T0000858;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000858;transcript_name=HG00140_ch_T0000858;gene_name=TTTY7;ID=exon:HG00140_ch_T0000858:0;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9682739	9686157	.	-	.	source_transcript=ENST00000421353.3;source_transcript_name=TTTY7-202;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421353.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421353.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000421353.3;transcript_id=HG00140_ch_T0000858;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000858;transcript_name=HG00140_ch_T0000858;gene_name=TTTY7;ID=intron:HG00140_ch_T0000858:0;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9686158	9686291	.	-	.	source_transcript=ENST00000421353.3;source_transcript_name=TTTY7-202;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421353.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421353.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000421353.3;transcript_id=HG00140_ch_T0000858;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000858;transcript_name=HG00140_ch_T0000858;gene_name=TTTY7;ID=exon:HG00140_ch_T0000858:1;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9686292	9689628	.	-	.	source_transcript=ENST00000421353.3;source_transcript_name=TTTY7-202;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421353.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421353.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000421353.3;transcript_id=HG00140_ch_T0000858;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000858;transcript_name=HG00140_ch_T0000858;gene_name=TTTY7;ID=intron:HG00140_ch_T0000858:1;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9689629	9689916	.	-	.	source_transcript=ENST00000421353.3;source_transcript_name=TTTY7-202;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421353.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421353.3;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000421353.3;transcript_id=HG00140_ch_T0000858;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000858;transcript_name=HG00140_ch_T0000858;gene_name=TTTY7;ID=exon:HG00140_ch_T0000858:2;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9682573	9689894	1000	-	.	source_transcript=ENST00000735963.1;source_transcript_name=TTTY7-214;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735963.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735963.1;transcript_id=HG00140_ch_T0000859;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_G0000272;transcript_name=HG00140_ch_T0000859;gene_name=TTTY7;ID=HG00140_ch_T0000859;Name=TTTY7
HG00140_chrY	CAT	exon	9682573	9682738	.	-	.	source_transcript=ENST00000735963.1;source_transcript_name=TTTY7-214;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735963.1;transcript_id=HG00140_ch_T0000859;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000859;transcript_name=HG00140_ch_T0000859;gene_name=TTTY7;ID=exon:HG00140_ch_T0000859:0;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9682739	9686157	.	-	.	source_transcript=ENST00000735963.1;source_transcript_name=TTTY7-214;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735963.1;transcript_id=HG00140_ch_T0000859;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000859;transcript_name=HG00140_ch_T0000859;gene_name=TTTY7;ID=intron:HG00140_ch_T0000859:0;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9686158	9686291	.	-	.	source_transcript=ENST00000735963.1;source_transcript_name=TTTY7-214;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735963.1;transcript_id=HG00140_ch_T0000859;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000859;transcript_name=HG00140_ch_T0000859;gene_name=TTTY7;ID=exon:HG00140_ch_T0000859:1;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9686292	9688346	.	-	.	source_transcript=ENST00000735963.1;source_transcript_name=TTTY7-214;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735963.1;transcript_id=HG00140_ch_T0000859;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000859;transcript_name=HG00140_ch_T0000859;gene_name=TTTY7;ID=intron:HG00140_ch_T0000859:1;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9688347	9688504	.	-	.	source_transcript=ENST00000735963.1;source_transcript_name=TTTY7-214;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735963.1;transcript_id=HG00140_ch_T0000859;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000859;transcript_name=HG00140_ch_T0000859;gene_name=TTTY7;ID=exon:HG00140_ch_T0000859:2;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9688505	9689628	.	-	.	source_transcript=ENST00000735963.1;source_transcript_name=TTTY7-214;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735963.1;transcript_id=HG00140_ch_T0000859;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000859;transcript_name=HG00140_ch_T0000859;gene_name=TTTY7;ID=intron:HG00140_ch_T0000859:2;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9689629	9689894	.	-	.	source_transcript=ENST00000735963.1;source_transcript_name=TTTY7-214;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735963.1;transcript_id=HG00140_ch_T0000859;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000859;transcript_name=HG00140_ch_T0000859;gene_name=TTTY7;ID=exon:HG00140_ch_T0000859:3;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9682576	9692398	1000	-	.	source_transcript=ENST00000735957.1;source_transcript_name=TTTY7-208;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735957.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735957.1;transcript_id=HG00140_ch_T0000860;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_G0000272;transcript_name=HG00140_ch_T0000860;gene_name=TTTY7;ID=HG00140_ch_T0000860;Name=TTTY7
HG00140_chrY	CAT	exon	9682576	9682738	.	-	.	source_transcript=ENST00000735957.1;source_transcript_name=TTTY7-208;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735957.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735957.1;transcript_id=HG00140_ch_T0000860;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000860;transcript_name=HG00140_ch_T0000860;gene_name=TTTY7;ID=exon:HG00140_ch_T0000860:0;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9682739	9688346	.	-	.	source_transcript=ENST00000735957.1;source_transcript_name=TTTY7-208;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735957.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735957.1;transcript_id=HG00140_ch_T0000860;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000860;transcript_name=HG00140_ch_T0000860;gene_name=TTTY7;ID=intron:HG00140_ch_T0000860:0;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9688347	9688504	.	-	.	source_transcript=ENST00000735957.1;source_transcript_name=TTTY7-208;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735957.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735957.1;transcript_id=HG00140_ch_T0000860;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000860;transcript_name=HG00140_ch_T0000860;gene_name=TTTY7;ID=exon:HG00140_ch_T0000860:1;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9688505	9692145	.	-	.	source_transcript=ENST00000735957.1;source_transcript_name=TTTY7-208;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735957.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735957.1;transcript_id=HG00140_ch_T0000860;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000860;transcript_name=HG00140_ch_T0000860;gene_name=TTTY7;ID=intron:HG00140_ch_T0000860:1;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9692146	9692398	.	-	.	source_transcript=ENST00000735957.1;source_transcript_name=TTTY7-208;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735957.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735957.1;transcript_id=HG00140_ch_T0000860;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000860;transcript_name=HG00140_ch_T0000860;gene_name=TTTY7;ID=exon:HG00140_ch_T0000860:2;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9682576	9689917	1000	-	.	source_transcript=ENST00000735962.1;source_transcript_name=TTTY7-213;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735962.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735962.1;transcript_id=HG00140_ch_T0000861;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_G0000272;transcript_name=HG00140_ch_T0000861;gene_name=TTTY7;ID=HG00140_ch_T0000861;Name=TTTY7
HG00140_chrY	CAT	exon	9682576	9682738	.	-	.	source_transcript=ENST00000735962.1;source_transcript_name=TTTY7-213;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735962.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735962.1;transcript_id=HG00140_ch_T0000861;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000861;transcript_name=HG00140_ch_T0000861;gene_name=TTTY7;ID=exon:HG00140_ch_T0000861:0;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9682739	9685654	.	-	.	source_transcript=ENST00000735962.1;source_transcript_name=TTTY7-213;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735962.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735962.1;transcript_id=HG00140_ch_T0000861;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000861;transcript_name=HG00140_ch_T0000861;gene_name=TTTY7;ID=intron:HG00140_ch_T0000861:0;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9685655	9685761	.	-	.	source_transcript=ENST00000735962.1;source_transcript_name=TTTY7-213;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735962.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735962.1;transcript_id=HG00140_ch_T0000861;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000861;transcript_name=HG00140_ch_T0000861;gene_name=TTTY7;ID=exon:HG00140_ch_T0000861:1;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9685762	9689628	.	-	.	source_transcript=ENST00000735962.1;source_transcript_name=TTTY7-213;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735962.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735962.1;transcript_id=HG00140_ch_T0000861;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000861;transcript_name=HG00140_ch_T0000861;gene_name=TTTY7;ID=intron:HG00140_ch_T0000861:1;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9689629	9689917	.	-	.	source_transcript=ENST00000735962.1;source_transcript_name=TTTY7-213;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735962.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735962.1;transcript_id=HG00140_ch_T0000861;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000861;transcript_name=HG00140_ch_T0000861;gene_name=TTTY7;ID=exon:HG00140_ch_T0000861:2;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9688261	9689915	1000	-	.	source_transcript=ENST00000735968.1;source_transcript_name=TTTY7-219;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735968.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735968.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735968.1;transcript_id=HG00140_ch_T0000864;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_G0000272;transcript_name=HG00140_ch_T0000864;gene_name=TTTY7;ID=HG00140_ch_T0000864;Name=TTTY7
HG00140_chrY	CAT	exon	9688261	9688504	.	-	.	source_transcript=ENST00000735968.1;source_transcript_name=TTTY7-219;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735968.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735968.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735968.1;transcript_id=HG00140_ch_T0000864;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000864;transcript_name=HG00140_ch_T0000864;gene_name=TTTY7;ID=exon:HG00140_ch_T0000864:0;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9688505	9689628	.	-	.	source_transcript=ENST00000735968.1;source_transcript_name=TTTY7-219;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735968.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735968.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735968.1;transcript_id=HG00140_ch_T0000864;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000864;transcript_name=HG00140_ch_T0000864;gene_name=TTTY7;ID=intron:HG00140_ch_T0000864:0;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9689629	9689915	.	-	.	source_transcript=ENST00000735968.1;source_transcript_name=TTTY7-219;source_gene=ENSG00000147753.11;source_gene_biotype=lncRNA;original_gene_id=ENSG00000147753.11;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735968.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735968.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=ENST00000735968.1;transcript_id=HG00140_ch_T0000864;gene_id=HG00140_ch_G0000272;Parent=HG00140_ch_T0000864;transcript_name=HG00140_ch_T0000864;gene_name=TTTY7;ID=exon:HG00140_ch_T0000864:1;Name=TTTY7;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	9721701	9742874	.	-	.	source_gene_common_name=TTTY1;source_gene=ENSG00000129845.6;alternative_source_transcripts=ENST00000250776.5;gene_id=HG00140_ch_G0000273;gene_biotype=lncRNA;gene_name=TTTY1;gene_sources=liftoff;ID=HG00140_ch_G0000273;Name=TTTY1
HG00140_chrY	CAT	transcript	9721701	9742834	1000	-	.	source_transcript=ENST00000250805.5;source_transcript_name=TTTY1-201;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250805.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250805.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000250776.5;transcript_id=HG00140_ch_T0000875;gene_id=HG00140_ch_G0000273;Parent=HG00140_ch_G0000273;transcript_name=HG00140_ch_T0000875;gene_name=TTTY1;ID=HG00140_ch_T0000875;Name=TTTY1
HG00140_chrY	CAT	exon	9721701	9721958	.	-	.	source_transcript=ENST00000250805.5;source_transcript_name=TTTY1-201;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250805.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250805.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000250776.5;transcript_id=HG00140_ch_T0000875;gene_id=HG00140_ch_G0000273;Parent=HG00140_ch_T0000875;transcript_name=HG00140_ch_T0000875;gene_name=TTTY1;ID=exon:HG00140_ch_T0000875:0;Name=TTTY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9721959	9729539	.	-	.	source_transcript=ENST00000250805.5;source_transcript_name=TTTY1-201;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250805.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250805.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000250776.5;transcript_id=HG00140_ch_T0000875;gene_id=HG00140_ch_G0000273;Parent=HG00140_ch_T0000875;transcript_name=HG00140_ch_T0000875;gene_name=TTTY1;ID=intron:HG00140_ch_T0000875:0;Name=TTTY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9729540	9729677	.	-	.	source_transcript=ENST00000250805.5;source_transcript_name=TTTY1-201;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250805.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250805.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000250776.5;transcript_id=HG00140_ch_T0000875;gene_id=HG00140_ch_G0000273;Parent=HG00140_ch_T0000875;transcript_name=HG00140_ch_T0000875;gene_name=TTTY1;ID=exon:HG00140_ch_T0000875:1;Name=TTTY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9729678	9732033	.	-	.	source_transcript=ENST00000250805.5;source_transcript_name=TTTY1-201;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250805.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250805.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000250776.5;transcript_id=HG00140_ch_T0000875;gene_id=HG00140_ch_G0000273;Parent=HG00140_ch_T0000875;transcript_name=HG00140_ch_T0000875;gene_name=TTTY1;ID=intron:HG00140_ch_T0000875:1;Name=TTTY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9732034	9732142	.	-	.	source_transcript=ENST00000250805.5;source_transcript_name=TTTY1-201;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250805.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250805.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000250776.5;transcript_id=HG00140_ch_T0000875;gene_id=HG00140_ch_G0000273;Parent=HG00140_ch_T0000875;transcript_name=HG00140_ch_T0000875;gene_name=TTTY1;ID=exon:HG00140_ch_T0000875:2;Name=TTTY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9732143	9739005	.	-	.	source_transcript=ENST00000250805.5;source_transcript_name=TTTY1-201;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250805.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250805.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000250776.5;transcript_id=HG00140_ch_T0000875;gene_id=HG00140_ch_G0000273;Parent=HG00140_ch_T0000875;transcript_name=HG00140_ch_T0000875;gene_name=TTTY1;ID=intron:HG00140_ch_T0000875:2;Name=TTTY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9739006	9739165	.	-	.	source_transcript=ENST00000250805.5;source_transcript_name=TTTY1-201;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250805.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250805.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000250776.5;transcript_id=HG00140_ch_T0000875;gene_id=HG00140_ch_G0000273;Parent=HG00140_ch_T0000875;transcript_name=HG00140_ch_T0000875;gene_name=TTTY1;ID=exon:HG00140_ch_T0000875:3;Name=TTTY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9739166	9742589	.	-	.	source_transcript=ENST00000250805.5;source_transcript_name=TTTY1-201;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250805.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250805.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000250776.5;transcript_id=HG00140_ch_T0000875;gene_id=HG00140_ch_G0000273;Parent=HG00140_ch_T0000875;transcript_name=HG00140_ch_T0000875;gene_name=TTTY1;ID=intron:HG00140_ch_T0000875:3;Name=TTTY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9742590	9742834	.	-	.	source_transcript=ENST00000250805.5;source_transcript_name=TTTY1-201;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000250805.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250805.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=ENST00000250776.5;transcript_id=HG00140_ch_T0000875;gene_id=HG00140_ch_G0000273;Parent=HG00140_ch_T0000875;transcript_name=HG00140_ch_T0000875;gene_name=TTTY1;ID=exon:HG00140_ch_T0000875:4;Name=TTTY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9727697	9742874	1000	-	.	source_transcript=ENST00000805314.1;source_transcript_name=TTTY1-202;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805314.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805314.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;transcript_id=HG00140_ch_T0000876;gene_id=HG00140_ch_G0000273;Parent=HG00140_ch_G0000273;transcript_name=HG00140_ch_T0000876;gene_name=TTTY1;ID=HG00140_ch_T0000876;Name=TTTY1
HG00140_chrY	CAT	exon	9727697	9727858	.	-	.	source_transcript=ENST00000805314.1;source_transcript_name=TTTY1-202;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805314.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805314.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;transcript_id=HG00140_ch_T0000876;gene_id=HG00140_ch_G0000273;Parent=HG00140_ch_T0000876;transcript_name=HG00140_ch_T0000876;gene_name=TTTY1;ID=exon:HG00140_ch_T0000876:0;Name=TTTY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9727859	9731983	.	-	.	source_transcript=ENST00000805314.1;source_transcript_name=TTTY1-202;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805314.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805314.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;transcript_id=HG00140_ch_T0000876;gene_id=HG00140_ch_G0000273;Parent=HG00140_ch_T0000876;transcript_name=HG00140_ch_T0000876;gene_name=TTTY1;ID=intron:HG00140_ch_T0000876:0;Name=TTTY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9731984	9732142	.	-	.	source_transcript=ENST00000805314.1;source_transcript_name=TTTY1-202;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805314.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805314.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;transcript_id=HG00140_ch_T0000876;gene_id=HG00140_ch_G0000273;Parent=HG00140_ch_T0000876;transcript_name=HG00140_ch_T0000876;gene_name=TTTY1;ID=exon:HG00140_ch_T0000876:1;Name=TTTY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9732143	9742589	.	-	.	source_transcript=ENST00000805314.1;source_transcript_name=TTTY1-202;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805314.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805314.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;transcript_id=HG00140_ch_T0000876;gene_id=HG00140_ch_G0000273;Parent=HG00140_ch_T0000876;transcript_name=HG00140_ch_T0000876;gene_name=TTTY1;ID=intron:HG00140_ch_T0000876:1;Name=TTTY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9742590	9742874	.	-	.	source_transcript=ENST00000805314.1;source_transcript_name=TTTY1-202;source_gene=ENSG00000129845.6;source_gene_biotype=lncRNA;original_gene_id=ENSG00000129845.6;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000805314.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000805314.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;transcript_id=HG00140_ch_T0000876;gene_id=HG00140_ch_G0000273;Parent=HG00140_ch_T0000876;transcript_name=HG00140_ch_T0000876;gene_name=TTTY1;ID=exon:HG00140_ch_T0000876:2;Name=TTTY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	9752132	9758621	.	+	.	source_gene_common_name=ENSG00000303345;source_gene=ENSG00000303345.1;alternative_source_transcripts=ENST00000793817.1,ENST00000793817.1;gene_id=HG00140_ch_G0000274;gene_biotype=lncRNA;gene_name=ENSG00000303345;gene_sources=liftoff;ID=HG00140_ch_G0000274;Name=ENSG00000303345
HG00140_chrY	CAT	transcript	9752132	9758621	1000	+	.	source_transcript=ENST00000793817.1;source_transcript_name=ENST00000793817;source_gene=ENSG00000303345.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303345.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793817.1;transcript_score=299.854;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303345;alternative_source_transcripts=ENST00000793817.1,ENST00000793817.1;transcript_id=HG00140_ch_T0000877;gene_id=HG00140_ch_G0000274;Parent=HG00140_ch_G0000274;transcript_name=HG00140_ch_T0000877;gene_name=ENSG00000303345;ID=HG00140_ch_T0000877;Name=ENSG00000303345
HG00140_chrY	CAT	exon	9752132	9752187	.	+	.	source_transcript=ENST00000793817.1;source_transcript_name=ENST00000793817;source_gene=ENSG00000303345.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303345.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793817.1;transcript_score=299.854;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303345;alternative_source_transcripts=ENST00000793817.1,ENST00000793817.1;transcript_id=HG00140_ch_T0000877;gene_id=HG00140_ch_G0000274;Parent=HG00140_ch_T0000877;transcript_name=HG00140_ch_T0000877;gene_name=ENSG00000303345;ID=exon:HG00140_ch_T0000877:0;Name=ENSG00000303345;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9752188	9752390	.	+	.	source_transcript=ENST00000793817.1;source_transcript_name=ENST00000793817;source_gene=ENSG00000303345.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303345.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793817.1;transcript_score=299.854;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303345;alternative_source_transcripts=ENST00000793817.1,ENST00000793817.1;transcript_id=HG00140_ch_T0000877;gene_id=HG00140_ch_G0000274;Parent=HG00140_ch_T0000877;transcript_name=HG00140_ch_T0000877;gene_name=ENSG00000303345;ID=intron:HG00140_ch_T0000877:0;Name=ENSG00000303345;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9752391	9752477	.	+	.	source_transcript=ENST00000793817.1;source_transcript_name=ENST00000793817;source_gene=ENSG00000303345.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303345.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793817.1;transcript_score=299.854;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303345;alternative_source_transcripts=ENST00000793817.1,ENST00000793817.1;transcript_id=HG00140_ch_T0000877;gene_id=HG00140_ch_G0000274;Parent=HG00140_ch_T0000877;transcript_name=HG00140_ch_T0000877;gene_name=ENSG00000303345;ID=exon:HG00140_ch_T0000877:1;Name=ENSG00000303345;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9752478	9755840	.	+	.	source_transcript=ENST00000793817.1;source_transcript_name=ENST00000793817;source_gene=ENSG00000303345.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303345.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793817.1;transcript_score=299.854;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303345;alternative_source_transcripts=ENST00000793817.1,ENST00000793817.1;transcript_id=HG00140_ch_T0000877;gene_id=HG00140_ch_G0000274;Parent=HG00140_ch_T0000877;transcript_name=HG00140_ch_T0000877;gene_name=ENSG00000303345;ID=intron:HG00140_ch_T0000877:1;Name=ENSG00000303345;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9755841	9755996	.	+	.	source_transcript=ENST00000793817.1;source_transcript_name=ENST00000793817;source_gene=ENSG00000303345.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303345.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793817.1;transcript_score=299.854;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303345;alternative_source_transcripts=ENST00000793817.1,ENST00000793817.1;transcript_id=HG00140_ch_T0000877;gene_id=HG00140_ch_G0000274;Parent=HG00140_ch_T0000877;transcript_name=HG00140_ch_T0000877;gene_name=ENSG00000303345;ID=exon:HG00140_ch_T0000877:2;Name=ENSG00000303345;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9755997	9758237	.	+	.	source_transcript=ENST00000793817.1;source_transcript_name=ENST00000793817;source_gene=ENSG00000303345.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303345.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793817.1;transcript_score=299.854;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303345;alternative_source_transcripts=ENST00000793817.1,ENST00000793817.1;transcript_id=HG00140_ch_T0000877;gene_id=HG00140_ch_G0000274;Parent=HG00140_ch_T0000877;transcript_name=HG00140_ch_T0000877;gene_name=ENSG00000303345;ID=intron:HG00140_ch_T0000877:2;Name=ENSG00000303345;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9758238	9758621	.	+	.	source_transcript=ENST00000793817.1;source_transcript_name=ENST00000793817;source_gene=ENSG00000303345.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000303345.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000793817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000793817.1;transcript_score=299.854;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000303345;alternative_source_transcripts=ENST00000793817.1,ENST00000793817.1;transcript_id=HG00140_ch_T0000877;gene_id=HG00140_ch_G0000274;Parent=HG00140_ch_T0000877;transcript_name=HG00140_ch_T0000877;gene_name=ENSG00000303345;ID=exon:HG00140_ch_T0000877:3;Name=ENSG00000303345;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	9763345	9776072	.	+	.	source_gene_common_name=LINC00280;source_gene=ENSG00000229643.2;alternative_source_transcripts=ENST00000652050.1,ENST00000652050.1;gene_id=HG00140_ch_G0000275;gene_biotype=lncRNA;gene_name=LINC00280;gene_sources=liftoff;ID=HG00140_ch_G0000275;Name=LINC00280
HG00140_chrY	CAT	transcript	9763345	9772705	1000	+	.	source_transcript=ENST00000652050.1;source_transcript_name=LINC00280-202;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652050.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652050.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=ENST00000652050.1,ENST00000652050.1;transcript_id=HG00140_ch_T0000878;gene_id=HG00140_ch_G0000275;Parent=HG00140_ch_G0000275;transcript_name=HG00140_ch_T0000878;gene_name=LINC00280;ID=HG00140_ch_T0000878;Name=LINC00280
HG00140_chrY	CAT	exon	9763345	9763513	.	+	.	source_transcript=ENST00000652050.1;source_transcript_name=LINC00280-202;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652050.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652050.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=ENST00000652050.1,ENST00000652050.1;transcript_id=HG00140_ch_T0000878;gene_id=HG00140_ch_G0000275;Parent=HG00140_ch_T0000878;transcript_name=HG00140_ch_T0000878;gene_name=LINC00280;ID=exon:HG00140_ch_T0000878:0;Name=LINC00280;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9763514	9763889	.	+	.	source_transcript=ENST00000652050.1;source_transcript_name=LINC00280-202;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652050.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652050.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=ENST00000652050.1,ENST00000652050.1;transcript_id=HG00140_ch_T0000878;gene_id=HG00140_ch_G0000275;Parent=HG00140_ch_T0000878;transcript_name=HG00140_ch_T0000878;gene_name=LINC00280;ID=intron:HG00140_ch_T0000878:0;Name=LINC00280;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9763890	9763962	.	+	.	source_transcript=ENST00000652050.1;source_transcript_name=LINC00280-202;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652050.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652050.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=ENST00000652050.1,ENST00000652050.1;transcript_id=HG00140_ch_T0000878;gene_id=HG00140_ch_G0000275;Parent=HG00140_ch_T0000878;transcript_name=HG00140_ch_T0000878;gene_name=LINC00280;ID=exon:HG00140_ch_T0000878:1;Name=LINC00280;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9763963	9766503	.	+	.	source_transcript=ENST00000652050.1;source_transcript_name=LINC00280-202;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652050.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652050.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=ENST00000652050.1,ENST00000652050.1;transcript_id=HG00140_ch_T0000878;gene_id=HG00140_ch_G0000275;Parent=HG00140_ch_T0000878;transcript_name=HG00140_ch_T0000878;gene_name=LINC00280;ID=intron:HG00140_ch_T0000878:1;Name=LINC00280;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9766504	9766756	.	+	.	source_transcript=ENST00000652050.1;source_transcript_name=LINC00280-202;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652050.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652050.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=ENST00000652050.1,ENST00000652050.1;transcript_id=HG00140_ch_T0000878;gene_id=HG00140_ch_G0000275;Parent=HG00140_ch_T0000878;transcript_name=HG00140_ch_T0000878;gene_name=LINC00280;ID=exon:HG00140_ch_T0000878:2;Name=LINC00280;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9766757	9770845	.	+	.	source_transcript=ENST00000652050.1;source_transcript_name=LINC00280-202;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652050.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652050.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=ENST00000652050.1,ENST00000652050.1;transcript_id=HG00140_ch_T0000878;gene_id=HG00140_ch_G0000275;Parent=HG00140_ch_T0000878;transcript_name=HG00140_ch_T0000878;gene_name=LINC00280;ID=intron:HG00140_ch_T0000878:2;Name=LINC00280;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9770846	9772705	.	+	.	source_transcript=ENST00000652050.1;source_transcript_name=LINC00280-202;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652050.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652050.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=ENST00000652050.1,ENST00000652050.1;transcript_id=HG00140_ch_T0000878;gene_id=HG00140_ch_G0000275;Parent=HG00140_ch_T0000878;transcript_name=HG00140_ch_T0000878;gene_name=LINC00280;ID=exon:HG00140_ch_T0000878:3;Name=LINC00280;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9771854	9776072	1000	+	.	source_transcript=ENST00000439525.1;source_transcript_name=LINC00280-201;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439525.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439525.1;transcript_score=299.777;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=ENST00000439525.1,ENST00000439525.1;transcript_id=HG00140_ch_T0000879;gene_id=HG00140_ch_G0000275;Parent=HG00140_ch_G0000275;transcript_name=HG00140_ch_T0000879;gene_name=LINC00280;ID=HG00140_ch_T0000879;Name=LINC00280
HG00140_chrY	CAT	exon	9771854	9771939	.	+	.	source_transcript=ENST00000439525.1;source_transcript_name=LINC00280-201;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439525.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439525.1;transcript_score=299.777;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=ENST00000439525.1,ENST00000439525.1;transcript_id=HG00140_ch_T0000879;gene_id=HG00140_ch_G0000275;Parent=HG00140_ch_T0000879;transcript_name=HG00140_ch_T0000879;gene_name=LINC00280;ID=exon:HG00140_ch_T0000879:0;Name=LINC00280;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9771940	9774440	.	+	.	source_transcript=ENST00000439525.1;source_transcript_name=LINC00280-201;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439525.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439525.1;transcript_score=299.777;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=ENST00000439525.1,ENST00000439525.1;transcript_id=HG00140_ch_T0000879;gene_id=HG00140_ch_G0000275;Parent=HG00140_ch_T0000879;transcript_name=HG00140_ch_T0000879;gene_name=LINC00280;ID=intron:HG00140_ch_T0000879:0;Name=LINC00280;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9774441	9774583	.	+	.	source_transcript=ENST00000439525.1;source_transcript_name=LINC00280-201;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439525.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439525.1;transcript_score=299.777;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=ENST00000439525.1,ENST00000439525.1;transcript_id=HG00140_ch_T0000879;gene_id=HG00140_ch_G0000275;Parent=HG00140_ch_T0000879;transcript_name=HG00140_ch_T0000879;gene_name=LINC00280;ID=exon:HG00140_ch_T0000879:1;Name=LINC00280;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9774584	9775853	.	+	.	source_transcript=ENST00000439525.1;source_transcript_name=LINC00280-201;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439525.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439525.1;transcript_score=299.777;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=ENST00000439525.1,ENST00000439525.1;transcript_id=HG00140_ch_T0000879;gene_id=HG00140_ch_G0000275;Parent=HG00140_ch_T0000879;transcript_name=HG00140_ch_T0000879;gene_name=LINC00280;ID=intron:HG00140_ch_T0000879:1;Name=LINC00280;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9775854	9776072	.	+	.	source_transcript=ENST00000439525.1;source_transcript_name=LINC00280-201;source_gene=ENSG00000229643.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229643.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439525.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439525.1;transcript_score=299.777;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=ENST00000439525.1,ENST00000439525.1;transcript_id=HG00140_ch_T0000879;gene_id=HG00140_ch_G0000275;Parent=HG00140_ch_T0000879;transcript_name=HG00140_ch_T0000879;gene_name=LINC00280;ID=exon:HG00140_ch_T0000879:2;Name=LINC00280;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	9789968	9805268	.	-	.	source_gene_common_name=RBMY2GP;source_gene=ENSG00000223744.1;gene_id=HG00140_ch_G0000276;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY2GP;gene_sources=liftoff;ID=HG00140_ch_G0000276;Name=RBMY2GP
HG00140_chrY	CAT	transcript	9789968	9805268	1000	-	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=HG00140_ch_T0000880;gene_id=HG00140_ch_G0000276;Parent=HG00140_ch_G0000276;transcript_name=HG00140_ch_T0000880;gene_name=RBMY2GP;ID=HG00140_ch_T0000880;Name=RBMY2GP
HG00140_chrY	CAT	exon	9789968	9790269	.	-	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=HG00140_ch_T0000880;gene_id=HG00140_ch_G0000276;Parent=HG00140_ch_T0000880;transcript_name=HG00140_ch_T0000880;gene_name=RBMY2GP;ID=exon:HG00140_ch_T0000880:0;Name=RBMY2GP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9790270	9790678	.	-	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=HG00140_ch_T0000880;gene_id=HG00140_ch_G0000276;Parent=HG00140_ch_T0000880;transcript_name=HG00140_ch_T0000880;gene_name=RBMY2GP;ID=intron:HG00140_ch_T0000880:0;Name=RBMY2GP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9790679	9790760	.	-	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=HG00140_ch_T0000880;gene_id=HG00140_ch_G0000276;Parent=HG00140_ch_T0000880;transcript_name=HG00140_ch_T0000880;gene_name=RBMY2GP;ID=exon:HG00140_ch_T0000880:1;Name=RBMY2GP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9790761	9790870	.	-	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=HG00140_ch_T0000880;gene_id=HG00140_ch_G0000276;Parent=HG00140_ch_T0000880;transcript_name=HG00140_ch_T0000880;gene_name=RBMY2GP;ID=intron:HG00140_ch_T0000880:1;Name=RBMY2GP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9790871	9790981	.	-	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=HG00140_ch_T0000880;gene_id=HG00140_ch_G0000276;Parent=HG00140_ch_T0000880;transcript_name=HG00140_ch_T0000880;gene_name=RBMY2GP;ID=exon:HG00140_ch_T0000880:2;Name=RBMY2GP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9790982	9791378	.	-	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=HG00140_ch_T0000880;gene_id=HG00140_ch_G0000276;Parent=HG00140_ch_T0000880;transcript_name=HG00140_ch_T0000880;gene_name=RBMY2GP;ID=intron:HG00140_ch_T0000880:2;Name=RBMY2GP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9791379	9791489	.	-	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=HG00140_ch_T0000880;gene_id=HG00140_ch_G0000276;Parent=HG00140_ch_T0000880;transcript_name=HG00140_ch_T0000880;gene_name=RBMY2GP;ID=exon:HG00140_ch_T0000880:3;Name=RBMY2GP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9791490	9792296	.	-	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=HG00140_ch_T0000880;gene_id=HG00140_ch_G0000276;Parent=HG00140_ch_T0000880;transcript_name=HG00140_ch_T0000880;gene_name=RBMY2GP;ID=intron:HG00140_ch_T0000880:3;Name=RBMY2GP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9792297	9792396	.	-	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=HG00140_ch_T0000880;gene_id=HG00140_ch_G0000276;Parent=HG00140_ch_T0000880;transcript_name=HG00140_ch_T0000880;gene_name=RBMY2GP;ID=exon:HG00140_ch_T0000880:4;Name=RBMY2GP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9792397	9794396	.	-	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=HG00140_ch_T0000880;gene_id=HG00140_ch_G0000276;Parent=HG00140_ch_T0000880;transcript_name=HG00140_ch_T0000880;gene_name=RBMY2GP;ID=intron:HG00140_ch_T0000880:4;Name=RBMY2GP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9794397	9794546	.	-	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=HG00140_ch_T0000880;gene_id=HG00140_ch_G0000276;Parent=HG00140_ch_T0000880;transcript_name=HG00140_ch_T0000880;gene_name=RBMY2GP;ID=exon:HG00140_ch_T0000880:5;Name=RBMY2GP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9794547	9805090	.	-	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=HG00140_ch_T0000880;gene_id=HG00140_ch_G0000276;Parent=HG00140_ch_T0000880;transcript_name=HG00140_ch_T0000880;gene_name=RBMY2GP;ID=intron:HG00140_ch_T0000880:5;Name=RBMY2GP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9805091	9805268	.	-	.	source_transcript=ENST00000418671.1;source_transcript_name=RBMY2GP-201;source_gene=ENSG00000223744.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223744.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418671.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418671.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2GP;transcript_id=HG00140_ch_T0000880;gene_id=HG00140_ch_G0000276;Parent=HG00140_ch_T0000880;transcript_name=HG00140_ch_T0000880;gene_name=RBMY2GP;ID=exon:HG00140_ch_T0000880:6;Name=RBMY2GP;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	9790691	9817123	.	-	.	source_gene_common_name=ENSG00000295986;source_gene=ENSG00000295986.1;gene_id=HG00140_ch_G0000277;gene_biotype=lncRNA;gene_name=ENSG00000295986;gene_sources=liftoff;ID=HG00140_ch_G0000277;Name=ENSG00000295986
HG00140_chrY	CAT	transcript	9790691	9817123	1000	-	.	source_transcript=ENST00000734848.1;source_transcript_name=ENST00000734848;source_gene=ENSG00000295986.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295986.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000734848.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000734848.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295986;transcript_id=HG00140_ch_T0000881;gene_id=HG00140_ch_G0000277;Parent=HG00140_ch_G0000277;transcript_name=HG00140_ch_T0000881;gene_name=ENSG00000295986;ID=HG00140_ch_T0000881;Name=ENSG00000295986
HG00140_chrY	CAT	exon	9790691	9790760	.	-	.	source_transcript=ENST00000734848.1;source_transcript_name=ENST00000734848;source_gene=ENSG00000295986.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295986.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000734848.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000734848.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295986;transcript_id=HG00140_ch_T0000881;gene_id=HG00140_ch_G0000277;Parent=HG00140_ch_T0000881;transcript_name=HG00140_ch_T0000881;gene_name=ENSG00000295986;ID=exon:HG00140_ch_T0000881:0;Name=ENSG00000295986;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9790761	9794396	.	-	.	source_transcript=ENST00000734848.1;source_transcript_name=ENST00000734848;source_gene=ENSG00000295986.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295986.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000734848.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000734848.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295986;transcript_id=HG00140_ch_T0000881;gene_id=HG00140_ch_G0000277;Parent=HG00140_ch_T0000881;transcript_name=HG00140_ch_T0000881;gene_name=ENSG00000295986;ID=intron:HG00140_ch_T0000881:0;Name=ENSG00000295986;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9794397	9794512	.	-	.	source_transcript=ENST00000734848.1;source_transcript_name=ENST00000734848;source_gene=ENSG00000295986.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295986.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000734848.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000734848.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295986;transcript_id=HG00140_ch_T0000881;gene_id=HG00140_ch_G0000277;Parent=HG00140_ch_T0000881;transcript_name=HG00140_ch_T0000881;gene_name=ENSG00000295986;ID=exon:HG00140_ch_T0000881:1;Name=ENSG00000295986;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9794513	9816639	.	-	.	source_transcript=ENST00000734848.1;source_transcript_name=ENST00000734848;source_gene=ENSG00000295986.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295986.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000734848.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000734848.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295986;transcript_id=HG00140_ch_T0000881;gene_id=HG00140_ch_G0000277;Parent=HG00140_ch_T0000881;transcript_name=HG00140_ch_T0000881;gene_name=ENSG00000295986;ID=intron:HG00140_ch_T0000881:1;Name=ENSG00000295986;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9816640	9817123	.	-	.	source_transcript=ENST00000734848.1;source_transcript_name=ENST00000734848;source_gene=ENSG00000295986.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295986.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000734848.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000734848.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295986;transcript_id=HG00140_ch_T0000881;gene_id=HG00140_ch_G0000277;Parent=HG00140_ch_T0000881;transcript_name=HG00140_ch_T0000881;gene_name=ENSG00000295986;ID=exon:HG00140_ch_T0000881:2;Name=ENSG00000295986;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	9825119	9827279	.	-	.	source_gene_common_name=ENSG00000235094;source_gene=ENSG00000235094.3;alternative_source_transcripts=ENST00000445200.2;gene_id=HG00140_ch_G0000278;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000235094;gene_sources=liftoff;ID=HG00140_ch_G0000278;Name=ENSG00000235094
HG00140_chrY	CAT	transcript	9825119	9827279	1000	-	.	source_transcript=ENST00000445200.2;source_transcript_name=ENST00000445200;source_gene=ENSG00000235094.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235094.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445200.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445200.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235094;alternative_source_transcripts=ENST00000445200.2;transcript_id=HG00140_ch_T0000882;gene_id=HG00140_ch_G0000278;Parent=HG00140_ch_G0000278;transcript_name=HG00140_ch_T0000882;gene_name=ENSG00000235094;ID=HG00140_ch_T0000882;Name=ENSG00000235094
HG00140_chrY	CAT	exon	9825119	9825164	.	-	.	source_transcript=ENST00000445200.2;source_transcript_name=ENST00000445200;source_gene=ENSG00000235094.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235094.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445200.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445200.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235094;alternative_source_transcripts=ENST00000445200.2;transcript_id=HG00140_ch_T0000882;gene_id=HG00140_ch_G0000278;Parent=HG00140_ch_T0000882;transcript_name=HG00140_ch_T0000882;gene_name=ENSG00000235094;ID=exon:HG00140_ch_T0000882:0;Name=ENSG00000235094;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9825165	9825400	.	-	.	source_transcript=ENST00000445200.2;source_transcript_name=ENST00000445200;source_gene=ENSG00000235094.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235094.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445200.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445200.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235094;alternative_source_transcripts=ENST00000445200.2;transcript_id=HG00140_ch_T0000882;gene_id=HG00140_ch_G0000278;Parent=HG00140_ch_T0000882;transcript_name=HG00140_ch_T0000882;gene_name=ENSG00000235094;ID=intron:HG00140_ch_T0000882:0;Name=ENSG00000235094;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9825401	9825423	.	-	.	source_transcript=ENST00000445200.2;source_transcript_name=ENST00000445200;source_gene=ENSG00000235094.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235094.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445200.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445200.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235094;alternative_source_transcripts=ENST00000445200.2;transcript_id=HG00140_ch_T0000882;gene_id=HG00140_ch_G0000278;Parent=HG00140_ch_T0000882;transcript_name=HG00140_ch_T0000882;gene_name=ENSG00000235094;ID=exon:HG00140_ch_T0000882:1;Name=ENSG00000235094;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9825424	9825509	.	-	.	source_transcript=ENST00000445200.2;source_transcript_name=ENST00000445200;source_gene=ENSG00000235094.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235094.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445200.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445200.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235094;alternative_source_transcripts=ENST00000445200.2;transcript_id=HG00140_ch_T0000882;gene_id=HG00140_ch_G0000278;Parent=HG00140_ch_T0000882;transcript_name=HG00140_ch_T0000882;gene_name=ENSG00000235094;ID=intron:HG00140_ch_T0000882:1;Name=ENSG00000235094;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9825510	9825625	.	-	.	source_transcript=ENST00000445200.2;source_transcript_name=ENST00000445200;source_gene=ENSG00000235094.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235094.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445200.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445200.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235094;alternative_source_transcripts=ENST00000445200.2;transcript_id=HG00140_ch_T0000882;gene_id=HG00140_ch_G0000278;Parent=HG00140_ch_T0000882;transcript_name=HG00140_ch_T0000882;gene_name=ENSG00000235094;ID=exon:HG00140_ch_T0000882:2;Name=ENSG00000235094;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9825626	9825820	.	-	.	source_transcript=ENST00000445200.2;source_transcript_name=ENST00000445200;source_gene=ENSG00000235094.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235094.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445200.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445200.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235094;alternative_source_transcripts=ENST00000445200.2;transcript_id=HG00140_ch_T0000882;gene_id=HG00140_ch_G0000278;Parent=HG00140_ch_T0000882;transcript_name=HG00140_ch_T0000882;gene_name=ENSG00000235094;ID=intron:HG00140_ch_T0000882:2;Name=ENSG00000235094;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9825821	9825898	.	-	.	source_transcript=ENST00000445200.2;source_transcript_name=ENST00000445200;source_gene=ENSG00000235094.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235094.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445200.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445200.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235094;alternative_source_transcripts=ENST00000445200.2;transcript_id=HG00140_ch_T0000882;gene_id=HG00140_ch_G0000278;Parent=HG00140_ch_T0000882;transcript_name=HG00140_ch_T0000882;gene_name=ENSG00000235094;ID=exon:HG00140_ch_T0000882:3;Name=ENSG00000235094;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9825899	9826949	.	-	.	source_transcript=ENST00000445200.2;source_transcript_name=ENST00000445200;source_gene=ENSG00000235094.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235094.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445200.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445200.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235094;alternative_source_transcripts=ENST00000445200.2;transcript_id=HG00140_ch_T0000882;gene_id=HG00140_ch_G0000278;Parent=HG00140_ch_T0000882;transcript_name=HG00140_ch_T0000882;gene_name=ENSG00000235094;ID=intron:HG00140_ch_T0000882:3;Name=ENSG00000235094;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9826950	9827279	.	-	.	source_transcript=ENST00000445200.2;source_transcript_name=ENST00000445200;source_gene=ENSG00000235094.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235094.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445200.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445200.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235094;alternative_source_transcripts=ENST00000445200.2;transcript_id=HG00140_ch_T0000882;gene_id=HG00140_ch_G0000278;Parent=HG00140_ch_T0000882;transcript_name=HG00140_ch_T0000882;gene_name=ENSG00000235094;ID=exon:HG00140_ch_T0000882:4;Name=ENSG00000235094;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	9828247	9829364	.	+	.	source_gene_common_name=TSPY19P;source_gene=ENSG00000234583.1;alternative_source_transcripts=ENST00000418461.1;gene_id=HG00140_ch_G0000279;gene_biotype=unprocessed_pseudogene;gene_name=TSPY19P;gene_sources=liftoff;ID=HG00140_ch_G0000279;Name=TSPY19P
HG00140_chrY	CAT	transcript	9828247	9829364	1000	+	.	source_transcript=ENST00000418461.1;source_transcript_name=TSPY19P-201;source_gene=ENSG00000234583.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234583.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418461.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY19P;alternative_source_transcripts=ENST00000418461.1;transcript_id=HG00140_ch_T0000883;gene_id=HG00140_ch_G0000279;Parent=HG00140_ch_G0000279;transcript_name=HG00140_ch_T0000883;gene_name=TSPY19P;ID=HG00140_ch_T0000883;Name=TSPY19P
HG00140_chrY	CAT	exon	9828247	9828722	.	+	.	source_transcript=ENST00000418461.1;source_transcript_name=TSPY19P-201;source_gene=ENSG00000234583.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234583.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY19P;alternative_source_transcripts=ENST00000418461.1;transcript_id=HG00140_ch_T0000883;gene_id=HG00140_ch_G0000279;Parent=HG00140_ch_T0000883;transcript_name=HG00140_ch_T0000883;gene_name=TSPY19P;ID=exon:HG00140_ch_T0000883:0;Name=TSPY19P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9828723	9829331	.	+	.	source_transcript=ENST00000418461.1;source_transcript_name=TSPY19P-201;source_gene=ENSG00000234583.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234583.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY19P;alternative_source_transcripts=ENST00000418461.1;transcript_id=HG00140_ch_T0000883;gene_id=HG00140_ch_G0000279;Parent=HG00140_ch_T0000883;transcript_name=HG00140_ch_T0000883;gene_name=TSPY19P;ID=intron:HG00140_ch_T0000883:0;Name=TSPY19P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9829332	9829364	.	+	.	source_transcript=ENST00000418461.1;source_transcript_name=TSPY19P-201;source_gene=ENSG00000234583.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234583.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418461.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418461.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY19P;alternative_source_transcripts=ENST00000418461.1;transcript_id=HG00140_ch_T0000883;gene_id=HG00140_ch_G0000279;Parent=HG00140_ch_T0000883;transcript_name=HG00140_ch_T0000883;gene_name=TSPY19P;ID=exon:HG00140_ch_T0000883:1;Name=TSPY19P;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	9858110	9866710	.	-	.	source_gene_common_name=ENSG00000296934;source_gene=ENSG00000296934.1;alternative_source_transcripts=ENST00000743706.1;gene_id=HG00140_ch_G0000280;gene_biotype=lncRNA;gene_name=ENSG00000296934;gene_sources=liftoff;ID=HG00140_ch_G0000280;Name=ENSG00000296934
HG00140_chrY	CAT	transcript	9858110	9866698	1000	-	.	source_transcript=ENST00000743706.1;source_transcript_name=ENST00000743706;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743706.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;alternative_source_transcripts=ENST00000743706.1;transcript_id=HG00140_ch_T0000884;gene_id=HG00140_ch_G0000280;Parent=HG00140_ch_G0000280;transcript_name=HG00140_ch_T0000884;gene_name=ENSG00000296934;ID=HG00140_ch_T0000884;Name=ENSG00000296934
HG00140_chrY	CAT	exon	9858110	9858723	.	-	.	source_transcript=ENST00000743706.1;source_transcript_name=ENST00000743706;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;alternative_source_transcripts=ENST00000743706.1;transcript_id=HG00140_ch_T0000884;gene_id=HG00140_ch_G0000280;Parent=HG00140_ch_T0000884;transcript_name=HG00140_ch_T0000884;gene_name=ENSG00000296934;ID=exon:HG00140_ch_T0000884:0;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9858724	9865330	.	-	.	source_transcript=ENST00000743706.1;source_transcript_name=ENST00000743706;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;alternative_source_transcripts=ENST00000743706.1;transcript_id=HG00140_ch_T0000884;gene_id=HG00140_ch_G0000280;Parent=HG00140_ch_T0000884;transcript_name=HG00140_ch_T0000884;gene_name=ENSG00000296934;ID=intron:HG00140_ch_T0000884:0;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9865331	9865441	.	-	.	source_transcript=ENST00000743706.1;source_transcript_name=ENST00000743706;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;alternative_source_transcripts=ENST00000743706.1;transcript_id=HG00140_ch_T0000884;gene_id=HG00140_ch_G0000280;Parent=HG00140_ch_T0000884;transcript_name=HG00140_ch_T0000884;gene_name=ENSG00000296934;ID=exon:HG00140_ch_T0000884:1;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9865442	9865569	.	-	.	source_transcript=ENST00000743706.1;source_transcript_name=ENST00000743706;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;alternative_source_transcripts=ENST00000743706.1;transcript_id=HG00140_ch_T0000884;gene_id=HG00140_ch_G0000280;Parent=HG00140_ch_T0000884;transcript_name=HG00140_ch_T0000884;gene_name=ENSG00000296934;ID=intron:HG00140_ch_T0000884:1;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9865570	9865647	.	-	.	source_transcript=ENST00000743706.1;source_transcript_name=ENST00000743706;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;alternative_source_transcripts=ENST00000743706.1;transcript_id=HG00140_ch_T0000884;gene_id=HG00140_ch_G0000280;Parent=HG00140_ch_T0000884;transcript_name=HG00140_ch_T0000884;gene_name=ENSG00000296934;ID=exon:HG00140_ch_T0000884:2;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9865648	9866253	.	-	.	source_transcript=ENST00000743706.1;source_transcript_name=ENST00000743706;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;alternative_source_transcripts=ENST00000743706.1;transcript_id=HG00140_ch_T0000884;gene_id=HG00140_ch_G0000280;Parent=HG00140_ch_T0000884;transcript_name=HG00140_ch_T0000884;gene_name=ENSG00000296934;ID=intron:HG00140_ch_T0000884:2;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9866254	9866698	.	-	.	source_transcript=ENST00000743706.1;source_transcript_name=ENST00000743706;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;alternative_source_transcripts=ENST00000743706.1;transcript_id=HG00140_ch_T0000884;gene_id=HG00140_ch_G0000280;Parent=HG00140_ch_T0000884;transcript_name=HG00140_ch_T0000884;gene_name=ENSG00000296934;ID=exon:HG00140_ch_T0000884:3;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9862221	9866710	1000	-	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;alternative_source_transcripts=ENST00000743707.1;transcript_id=HG00140_ch_T0000886;gene_id=HG00140_ch_G0000280;Parent=HG00140_ch_G0000280;transcript_name=HG00140_ch_T0000886;gene_name=ENSG00000296934;ID=HG00140_ch_T0000886;Name=ENSG00000296934
HG00140_chrY	CAT	exon	9862221	9862789	.	-	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;alternative_source_transcripts=ENST00000743707.1;transcript_id=HG00140_ch_T0000886;gene_id=HG00140_ch_G0000280;Parent=HG00140_ch_T0000886;transcript_name=HG00140_ch_T0000886;gene_name=ENSG00000296934;ID=exon:HG00140_ch_T0000886:0;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9862790	9864191	.	-	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;alternative_source_transcripts=ENST00000743707.1;transcript_id=HG00140_ch_T0000886;gene_id=HG00140_ch_G0000280;Parent=HG00140_ch_T0000886;transcript_name=HG00140_ch_T0000886;gene_name=ENSG00000296934;ID=intron:HG00140_ch_T0000886:0;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9864192	9864205	.	-	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;alternative_source_transcripts=ENST00000743707.1;transcript_id=HG00140_ch_T0000886;gene_id=HG00140_ch_G0000280;Parent=HG00140_ch_T0000886;transcript_name=HG00140_ch_T0000886;gene_name=ENSG00000296934;ID=exon:HG00140_ch_T0000886:1;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9864206	9864858	.	-	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;alternative_source_transcripts=ENST00000743707.1;transcript_id=HG00140_ch_T0000886;gene_id=HG00140_ch_G0000280;Parent=HG00140_ch_T0000886;transcript_name=HG00140_ch_T0000886;gene_name=ENSG00000296934;ID=intron:HG00140_ch_T0000886:1;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9864859	9864981	.	-	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;alternative_source_transcripts=ENST00000743707.1;transcript_id=HG00140_ch_T0000886;gene_id=HG00140_ch_G0000280;Parent=HG00140_ch_T0000886;transcript_name=HG00140_ch_T0000886;gene_name=ENSG00000296934;ID=exon:HG00140_ch_T0000886:2;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9864982	9865330	.	-	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;alternative_source_transcripts=ENST00000743707.1;transcript_id=HG00140_ch_T0000886;gene_id=HG00140_ch_G0000280;Parent=HG00140_ch_T0000886;transcript_name=HG00140_ch_T0000886;gene_name=ENSG00000296934;ID=intron:HG00140_ch_T0000886:2;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9865331	9865441	.	-	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;alternative_source_transcripts=ENST00000743707.1;transcript_id=HG00140_ch_T0000886;gene_id=HG00140_ch_G0000280;Parent=HG00140_ch_T0000886;transcript_name=HG00140_ch_T0000886;gene_name=ENSG00000296934;ID=exon:HG00140_ch_T0000886:3;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9865442	9865569	.	-	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;alternative_source_transcripts=ENST00000743707.1;transcript_id=HG00140_ch_T0000886;gene_id=HG00140_ch_G0000280;Parent=HG00140_ch_T0000886;transcript_name=HG00140_ch_T0000886;gene_name=ENSG00000296934;ID=intron:HG00140_ch_T0000886:3;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9865570	9865690	.	-	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;alternative_source_transcripts=ENST00000743707.1;transcript_id=HG00140_ch_T0000886;gene_id=HG00140_ch_G0000280;Parent=HG00140_ch_T0000886;transcript_name=HG00140_ch_T0000886;gene_name=ENSG00000296934;ID=exon:HG00140_ch_T0000886:4;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9865691	9866145	.	-	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;alternative_source_transcripts=ENST00000743707.1;transcript_id=HG00140_ch_T0000886;gene_id=HG00140_ch_G0000280;Parent=HG00140_ch_T0000886;transcript_name=HG00140_ch_T0000886;gene_name=ENSG00000296934;ID=intron:HG00140_ch_T0000886:4;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9866146	9866220	.	-	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;alternative_source_transcripts=ENST00000743707.1;transcript_id=HG00140_ch_T0000886;gene_id=HG00140_ch_G0000280;Parent=HG00140_ch_T0000886;transcript_name=HG00140_ch_T0000886;gene_name=ENSG00000296934;ID=exon:HG00140_ch_T0000886:5;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9866221	9866643	.	-	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;alternative_source_transcripts=ENST00000743707.1;transcript_id=HG00140_ch_T0000886;gene_id=HG00140_ch_G0000280;Parent=HG00140_ch_T0000886;transcript_name=HG00140_ch_T0000886;gene_name=ENSG00000296934;ID=intron:HG00140_ch_T0000886:5;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9866644	9866710	.	-	.	source_transcript=ENST00000743707.1;source_transcript_name=ENST00000743707;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;alternative_source_transcripts=ENST00000743707.1;transcript_id=HG00140_ch_T0000886;gene_id=HG00140_ch_G0000280;Parent=HG00140_ch_T0000886;transcript_name=HG00140_ch_T0000886;gene_name=ENSG00000296934;ID=exon:HG00140_ch_T0000886:6;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9862389	9866721	1000	-	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;alternative_source_transcripts=ENST00000743708.1;transcript_id=HG00140_ch_T0000887;gene_id=HG00140_ch_G0000280;Parent=HG00140_ch_G0000280;transcript_name=HG00140_ch_T0000887;gene_name=ENSG00000296934;ID=HG00140_ch_T0000887;Name=ENSG00000296934
HG00140_chrY	CAT	exon	9862389	9862770	.	-	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;alternative_source_transcripts=ENST00000743708.1;transcript_id=HG00140_ch_T0000887;gene_id=HG00140_ch_G0000280;Parent=HG00140_ch_T0000887;transcript_name=HG00140_ch_T0000887;gene_name=ENSG00000296934;ID=exon:HG00140_ch_T0000887:0;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9862771	9864191	.	-	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;alternative_source_transcripts=ENST00000743708.1;transcript_id=HG00140_ch_T0000887;gene_id=HG00140_ch_G0000280;Parent=HG00140_ch_T0000887;transcript_name=HG00140_ch_T0000887;gene_name=ENSG00000296934;ID=intron:HG00140_ch_T0000887:0;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9864192	9864205	.	-	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;alternative_source_transcripts=ENST00000743708.1;transcript_id=HG00140_ch_T0000887;gene_id=HG00140_ch_G0000280;Parent=HG00140_ch_T0000887;transcript_name=HG00140_ch_T0000887;gene_name=ENSG00000296934;ID=exon:HG00140_ch_T0000887:1;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9864206	9864858	.	-	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;alternative_source_transcripts=ENST00000743708.1;transcript_id=HG00140_ch_T0000887;gene_id=HG00140_ch_G0000280;Parent=HG00140_ch_T0000887;transcript_name=HG00140_ch_T0000887;gene_name=ENSG00000296934;ID=intron:HG00140_ch_T0000887:1;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9864859	9864981	.	-	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;alternative_source_transcripts=ENST00000743708.1;transcript_id=HG00140_ch_T0000887;gene_id=HG00140_ch_G0000280;Parent=HG00140_ch_T0000887;transcript_name=HG00140_ch_T0000887;gene_name=ENSG00000296934;ID=exon:HG00140_ch_T0000887:2;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9864982	9865088	.	-	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;alternative_source_transcripts=ENST00000743708.1;transcript_id=HG00140_ch_T0000887;gene_id=HG00140_ch_G0000280;Parent=HG00140_ch_T0000887;transcript_name=HG00140_ch_T0000887;gene_name=ENSG00000296934;ID=intron:HG00140_ch_T0000887:2;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9865089	9865231	.	-	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;alternative_source_transcripts=ENST00000743708.1;transcript_id=HG00140_ch_T0000887;gene_id=HG00140_ch_G0000280;Parent=HG00140_ch_T0000887;transcript_name=HG00140_ch_T0000887;gene_name=ENSG00000296934;ID=exon:HG00140_ch_T0000887:3;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9865232	9865330	.	-	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;alternative_source_transcripts=ENST00000743708.1;transcript_id=HG00140_ch_T0000887;gene_id=HG00140_ch_G0000280;Parent=HG00140_ch_T0000887;transcript_name=HG00140_ch_T0000887;gene_name=ENSG00000296934;ID=intron:HG00140_ch_T0000887:3;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9865331	9865441	.	-	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;alternative_source_transcripts=ENST00000743708.1;transcript_id=HG00140_ch_T0000887;gene_id=HG00140_ch_G0000280;Parent=HG00140_ch_T0000887;transcript_name=HG00140_ch_T0000887;gene_name=ENSG00000296934;ID=exon:HG00140_ch_T0000887:4;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9865442	9865569	.	-	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;alternative_source_transcripts=ENST00000743708.1;transcript_id=HG00140_ch_T0000887;gene_id=HG00140_ch_G0000280;Parent=HG00140_ch_T0000887;transcript_name=HG00140_ch_T0000887;gene_name=ENSG00000296934;ID=intron:HG00140_ch_T0000887:4;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9865570	9866721	.	-	.	source_transcript=ENST00000743708.1;source_transcript_name=ENST00000743708;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;alternative_source_transcripts=ENST00000743708.1;transcript_id=HG00140_ch_T0000887;gene_id=HG00140_ch_G0000280;Parent=HG00140_ch_T0000887;transcript_name=HG00140_ch_T0000887;gene_name=ENSG00000296934;ID=exon:HG00140_ch_T0000887:5;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9863645	9866710	1000	-	.	source_transcript=ENST00000743709.1;source_transcript_name=ENST00000743709;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743709.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;alternative_source_transcripts=ENST00000743709.1;transcript_id=HG00140_ch_T0000888;gene_id=HG00140_ch_G0000280;Parent=HG00140_ch_G0000280;transcript_name=HG00140_ch_T0000888;gene_name=ENSG00000296934;ID=HG00140_ch_T0000888;Name=ENSG00000296934
HG00140_chrY	CAT	exon	9863645	9864205	.	-	.	source_transcript=ENST00000743709.1;source_transcript_name=ENST00000743709;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;alternative_source_transcripts=ENST00000743709.1;transcript_id=HG00140_ch_T0000888;gene_id=HG00140_ch_G0000280;Parent=HG00140_ch_T0000888;transcript_name=HG00140_ch_T0000888;gene_name=ENSG00000296934;ID=exon:HG00140_ch_T0000888:0;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9864206	9864858	.	-	.	source_transcript=ENST00000743709.1;source_transcript_name=ENST00000743709;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;alternative_source_transcripts=ENST00000743709.1;transcript_id=HG00140_ch_T0000888;gene_id=HG00140_ch_G0000280;Parent=HG00140_ch_T0000888;transcript_name=HG00140_ch_T0000888;gene_name=ENSG00000296934;ID=intron:HG00140_ch_T0000888:0;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9864859	9864981	.	-	.	source_transcript=ENST00000743709.1;source_transcript_name=ENST00000743709;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;alternative_source_transcripts=ENST00000743709.1;transcript_id=HG00140_ch_T0000888;gene_id=HG00140_ch_G0000280;Parent=HG00140_ch_T0000888;transcript_name=HG00140_ch_T0000888;gene_name=ENSG00000296934;ID=exon:HG00140_ch_T0000888:1;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9864982	9865088	.	-	.	source_transcript=ENST00000743709.1;source_transcript_name=ENST00000743709;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;alternative_source_transcripts=ENST00000743709.1;transcript_id=HG00140_ch_T0000888;gene_id=HG00140_ch_G0000280;Parent=HG00140_ch_T0000888;transcript_name=HG00140_ch_T0000888;gene_name=ENSG00000296934;ID=intron:HG00140_ch_T0000888:1;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9865089	9865231	.	-	.	source_transcript=ENST00000743709.1;source_transcript_name=ENST00000743709;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;alternative_source_transcripts=ENST00000743709.1;transcript_id=HG00140_ch_T0000888;gene_id=HG00140_ch_G0000280;Parent=HG00140_ch_T0000888;transcript_name=HG00140_ch_T0000888;gene_name=ENSG00000296934;ID=exon:HG00140_ch_T0000888:2;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9865232	9865330	.	-	.	source_transcript=ENST00000743709.1;source_transcript_name=ENST00000743709;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;alternative_source_transcripts=ENST00000743709.1;transcript_id=HG00140_ch_T0000888;gene_id=HG00140_ch_G0000280;Parent=HG00140_ch_T0000888;transcript_name=HG00140_ch_T0000888;gene_name=ENSG00000296934;ID=intron:HG00140_ch_T0000888:2;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9865331	9865441	.	-	.	source_transcript=ENST00000743709.1;source_transcript_name=ENST00000743709;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;alternative_source_transcripts=ENST00000743709.1;transcript_id=HG00140_ch_T0000888;gene_id=HG00140_ch_G0000280;Parent=HG00140_ch_T0000888;transcript_name=HG00140_ch_T0000888;gene_name=ENSG00000296934;ID=exon:HG00140_ch_T0000888:3;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9865442	9865569	.	-	.	source_transcript=ENST00000743709.1;source_transcript_name=ENST00000743709;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;alternative_source_transcripts=ENST00000743709.1;transcript_id=HG00140_ch_T0000888;gene_id=HG00140_ch_G0000280;Parent=HG00140_ch_T0000888;transcript_name=HG00140_ch_T0000888;gene_name=ENSG00000296934;ID=intron:HG00140_ch_T0000888:3;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9865570	9866710	.	-	.	source_transcript=ENST00000743709.1;source_transcript_name=ENST00000743709;source_gene=ENSG00000296934.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296934.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000743709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000743709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296934;alternative_source_transcripts=ENST00000743709.1;transcript_id=HG00140_ch_T0000888;gene_id=HG00140_ch_G0000280;Parent=HG00140_ch_T0000888;transcript_name=HG00140_ch_T0000888;gene_name=ENSG00000296934;ID=exon:HG00140_ch_T0000888:4;Name=ENSG00000296934;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	9859258	9859744	.	+	.	source_gene_common_name=ENSG00000275352;source_gene=ENSG00000275352.1;alternative_source_transcripts=ENST00000613408.1,ENST00000613408.1;gene_id=HG00140_ch_G0000281;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000275352;gene_sources=liftoff;ID=HG00140_ch_G0000281;Name=ENSG00000275352
HG00140_chrY	CAT	transcript	9859258	9859744	1000	+	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;alternative_source_transcripts=ENST00000613408.1,ENST00000613408.1;transcript_id=HG00140_ch_T0000885;gene_id=HG00140_ch_G0000281;Parent=HG00140_ch_G0000281;transcript_name=HG00140_ch_T0000885;gene_name=ENSG00000275352;ID=HG00140_ch_T0000885;Name=ENSG00000275352
HG00140_chrY	CAT	exon	9859258	9859321	.	+	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;alternative_source_transcripts=ENST00000613408.1,ENST00000613408.1;transcript_id=HG00140_ch_T0000885;gene_id=HG00140_ch_G0000281;Parent=HG00140_ch_T0000885;transcript_name=HG00140_ch_T0000885;gene_name=ENSG00000275352;ID=exon:HG00140_ch_T0000885:0;Name=ENSG00000275352;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9859322	9859410	.	+	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;alternative_source_transcripts=ENST00000613408.1,ENST00000613408.1;transcript_id=HG00140_ch_T0000885;gene_id=HG00140_ch_G0000281;Parent=HG00140_ch_T0000885;transcript_name=HG00140_ch_T0000885;gene_name=ENSG00000275352;ID=intron:HG00140_ch_T0000885:0;Name=ENSG00000275352;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9859411	9859555	.	+	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;alternative_source_transcripts=ENST00000613408.1,ENST00000613408.1;transcript_id=HG00140_ch_T0000885;gene_id=HG00140_ch_G0000281;Parent=HG00140_ch_T0000885;transcript_name=HG00140_ch_T0000885;gene_name=ENSG00000275352;ID=exon:HG00140_ch_T0000885:1;Name=ENSG00000275352;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9859556	9859661	.	+	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;alternative_source_transcripts=ENST00000613408.1,ENST00000613408.1;transcript_id=HG00140_ch_T0000885;gene_id=HG00140_ch_G0000281;Parent=HG00140_ch_T0000885;transcript_name=HG00140_ch_T0000885;gene_name=ENSG00000275352;ID=intron:HG00140_ch_T0000885:1;Name=ENSG00000275352;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9859662	9859744	.	+	.	source_transcript=ENST00000613408.1;source_transcript_name=ENST00000613408;source_gene=ENSG00000275352.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275352.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613408.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613408.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275352;alternative_source_transcripts=ENST00000613408.1,ENST00000613408.1;transcript_id=HG00140_ch_T0000885;gene_id=HG00140_ch_G0000281;Parent=HG00140_ch_T0000885;transcript_name=HG00140_ch_T0000885;gene_name=ENSG00000275352;ID=exon:HG00140_ch_T0000885:2;Name=ENSG00000275352;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	9864048	9866730	.	-	.	source_gene_common_name=TSPY11P;source_gene=ENSG00000238235.1;gene_id=HG00140_ch_G0000282;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY11P;gene_sources=liftoff;ID=HG00140_ch_G0000282;Name=TSPY11P
HG00140_chrY	CAT	transcript	9864048	9866730	1000	-	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=HG00140_ch_T0000889;gene_id=HG00140_ch_G0000282;Parent=HG00140_ch_G0000282;transcript_name=HG00140_ch_T0000889;gene_name=TSPY11P;ID=HG00140_ch_T0000889;Name=TSPY11P
HG00140_chrY	CAT	exon	9864048	9864194	.	-	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=HG00140_ch_T0000889;gene_id=HG00140_ch_G0000282;Parent=HG00140_ch_T0000889;transcript_name=HG00140_ch_T0000889;gene_name=TSPY11P;ID=exon:HG00140_ch_T0000889:0;Name=TSPY11P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9864195	9864892	.	-	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=HG00140_ch_T0000889;gene_id=HG00140_ch_G0000282;Parent=HG00140_ch_T0000889;transcript_name=HG00140_ch_T0000889;gene_name=TSPY11P;ID=intron:HG00140_ch_T0000889:0;Name=TSPY11P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9864893	9864981	.	-	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=HG00140_ch_T0000889;gene_id=HG00140_ch_G0000282;Parent=HG00140_ch_T0000889;transcript_name=HG00140_ch_T0000889;gene_name=TSPY11P;ID=exon:HG00140_ch_T0000889:1;Name=TSPY11P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9864982	9865088	.	-	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=HG00140_ch_T0000889;gene_id=HG00140_ch_G0000282;Parent=HG00140_ch_T0000889;transcript_name=HG00140_ch_T0000889;gene_name=TSPY11P;ID=intron:HG00140_ch_T0000889:1;Name=TSPY11P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9865089	9865231	.	-	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=HG00140_ch_T0000889;gene_id=HG00140_ch_G0000282;Parent=HG00140_ch_T0000889;transcript_name=HG00140_ch_T0000889;gene_name=TSPY11P;ID=exon:HG00140_ch_T0000889:2;Name=TSPY11P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9865232	9865330	.	-	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=HG00140_ch_T0000889;gene_id=HG00140_ch_G0000282;Parent=HG00140_ch_T0000889;transcript_name=HG00140_ch_T0000889;gene_name=TSPY11P;ID=intron:HG00140_ch_T0000889:2;Name=TSPY11P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9865331	9865441	.	-	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=HG00140_ch_T0000889;gene_id=HG00140_ch_G0000282;Parent=HG00140_ch_T0000889;transcript_name=HG00140_ch_T0000889;gene_name=TSPY11P;ID=exon:HG00140_ch_T0000889:3;Name=TSPY11P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9865442	9865569	.	-	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=HG00140_ch_T0000889;gene_id=HG00140_ch_G0000282;Parent=HG00140_ch_T0000889;transcript_name=HG00140_ch_T0000889;gene_name=TSPY11P;ID=intron:HG00140_ch_T0000889:3;Name=TSPY11P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9865570	9865647	.	-	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=HG00140_ch_T0000889;gene_id=HG00140_ch_G0000282;Parent=HG00140_ch_T0000889;transcript_name=HG00140_ch_T0000889;gene_name=TSPY11P;ID=exon:HG00140_ch_T0000889:4;Name=TSPY11P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9865648	9866253	.	-	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=HG00140_ch_T0000889;gene_id=HG00140_ch_G0000282;Parent=HG00140_ch_T0000889;transcript_name=HG00140_ch_T0000889;gene_name=TSPY11P;ID=intron:HG00140_ch_T0000889:4;Name=TSPY11P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9866254	9866730	.	-	.	source_transcript=ENST00000442607.1;source_transcript_name=TSPY11P-201;source_gene=ENSG00000238235.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000238235.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442607.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442607.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY11P;transcript_id=HG00140_ch_T0000889;gene_id=HG00140_ch_G0000282;Parent=HG00140_ch_T0000889;transcript_name=HG00140_ch_T0000889;gene_name=TSPY11P;ID=exon:HG00140_ch_T0000889:5;Name=TSPY11P;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	9867729	9869722	.	+	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000234830.9;gene_id=HG00140_ch_G0000283;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG00140_ch_G0000283;Name=FAM197Y9
HG00140_chrY	CAT	transcript	9867729	9869722	1000	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000890;gene_id=HG00140_ch_G0000283;Parent=HG00140_ch_G0000283;transcript_name=HG00140_ch_T0000890;gene_name=FAM197Y9;ID=HG00140_ch_T0000890;Name=FAM197Y9
HG00140_chrY	CAT	exon	9867729	9868038	.	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000890;gene_id=HG00140_ch_G0000283;Parent=HG00140_ch_T0000890;transcript_name=HG00140_ch_T0000890;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000890:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9868039	9869380	.	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000890;gene_id=HG00140_ch_G0000283;Parent=HG00140_ch_T0000890;transcript_name=HG00140_ch_T0000890;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000890:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9869381	9869464	.	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000890;gene_id=HG00140_ch_G0000283;Parent=HG00140_ch_T0000890;transcript_name=HG00140_ch_T0000890;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000890:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9869465	9869576	.	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000890;gene_id=HG00140_ch_G0000283;Parent=HG00140_ch_T0000890;transcript_name=HG00140_ch_T0000890;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000890:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9869577	9869722	.	+	.	source_transcript=ENST00000505707.3;source_transcript_name=FAM197Y9-201;source_gene=ENSG00000234830.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234830.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000505707.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000505707.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000890;gene_id=HG00140_ch_G0000283;Parent=HG00140_ch_T0000890;transcript_name=HG00140_ch_T0000890;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000890:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	9869371	9877058	.	+	.	source_gene_common_name=FAM197Y9;source_gene=ENSG00000290448.1;gene_id=HG00140_ch_G0000284;gene_biotype=lncRNA;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG00140_ch_G0000284;Name=FAM197Y9
HG00140_chrY	CAT	transcript	9869371	9877058	1000	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000891;gene_id=HG00140_ch_G0000284;Parent=HG00140_ch_G0000284;transcript_name=HG00140_ch_T0000891;gene_name=FAM197Y9;ID=HG00140_ch_T0000891;Name=FAM197Y9
HG00140_chrY	CAT	exon	9869371	9869490	.	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000891;gene_id=HG00140_ch_G0000284;Parent=HG00140_ch_T0000891;transcript_name=HG00140_ch_T0000891;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000891:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9869491	9871295	.	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000891;gene_id=HG00140_ch_G0000284;Parent=HG00140_ch_T0000891;transcript_name=HG00140_ch_T0000891;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000891:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9871296	9871381	.	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000891;gene_id=HG00140_ch_G0000284;Parent=HG00140_ch_T0000891;transcript_name=HG00140_ch_T0000891;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000891:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9871382	9874932	.	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000891;gene_id=HG00140_ch_G0000284;Parent=HG00140_ch_T0000891;transcript_name=HG00140_ch_T0000891;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000891:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9874933	9877058	.	+	.	source_transcript=ENST00000451062.1;source_transcript_name=FAM197Y9-202;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000891;gene_id=HG00140_ch_G0000284;Parent=HG00140_ch_T0000891;transcript_name=HG00140_ch_T0000891;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000891:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9869389	9874992	1000	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000892;gene_id=HG00140_ch_G0000284;Parent=HG00140_ch_G0000284;transcript_name=HG00140_ch_T0000892;gene_name=FAM197Y9;ID=HG00140_ch_T0000892;Name=FAM197Y9
HG00140_chrY	CAT	exon	9869389	9869490	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000892;gene_id=HG00140_ch_G0000284;Parent=HG00140_ch_T0000892;transcript_name=HG00140_ch_T0000892;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000892:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9869491	9869576	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000892;gene_id=HG00140_ch_G0000284;Parent=HG00140_ch_T0000892;transcript_name=HG00140_ch_T0000892;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000892:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9869577	9869722	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000892;gene_id=HG00140_ch_G0000284;Parent=HG00140_ch_T0000892;transcript_name=HG00140_ch_T0000892;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000892:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9869723	9871222	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000892;gene_id=HG00140_ch_G0000284;Parent=HG00140_ch_T0000892;transcript_name=HG00140_ch_T0000892;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000892:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9871223	9871381	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000892;gene_id=HG00140_ch_G0000284;Parent=HG00140_ch_T0000892;transcript_name=HG00140_ch_T0000892;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000892:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9871382	9874932	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000892;gene_id=HG00140_ch_G0000284;Parent=HG00140_ch_T0000892;transcript_name=HG00140_ch_T0000892;gene_name=FAM197Y9;ID=intron:HG00140_ch_T0000892:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9874933	9874992	.	+	.	source_transcript=ENST00000452103.5;source_transcript_name=FAM197Y9-203;source_gene=ENSG00000290448.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290448.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000452103.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000452103.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;transcript_id=HG00140_ch_T0000892;gene_id=HG00140_ch_G0000284;Parent=HG00140_ch_T0000892;transcript_name=HG00140_ch_T0000892;gene_name=FAM197Y9;ID=exon:HG00140_ch_T0000892:3;Name=FAM197Y9;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	9884304	9887100	.	-	.	source_gene_common_name=TSPY2;source_gene=ENSG00000168757.13;alternative_source_transcripts=ENST00000470569.1;gene_id=HG00140_ch_G0000285;gene_biotype=protein_coding;gene_name=TSPY2;gene_sources=liftoff;ID=HG00140_ch_G0000285;Name=TSPY2
HG00140_chrY	CAT	transcript	9884304	9887054	1000	-	.	source_transcript=ENST00000470569.1;source_transcript_name=TSPY2-205;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000470569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470569.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000470569.1;transcript_id=HG00140_ch_T0000893;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_G0000285;transcript_name=HG00140_ch_T0000893;gene_name=TSPY2;ID=HG00140_ch_T0000893;Name=TSPY2
HG00140_chrY	CAT	exon	9884304	9885087	.	-	.	source_transcript=ENST00000470569.1;source_transcript_name=TSPY2-205;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000470569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000470569.1;transcript_id=HG00140_ch_T0000893;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000893;transcript_name=HG00140_ch_T0000893;gene_name=TSPY2;ID=exon:HG00140_ch_T0000893:0;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9885088	9885214	.	-	.	source_transcript=ENST00000470569.1;source_transcript_name=TSPY2-205;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000470569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000470569.1;transcript_id=HG00140_ch_T0000893;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000893;transcript_name=HG00140_ch_T0000893;gene_name=TSPY2;ID=intron:HG00140_ch_T0000893:0;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9885215	9885761	.	-	.	source_transcript=ENST00000470569.1;source_transcript_name=TSPY2-205;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000470569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000470569.1;transcript_id=HG00140_ch_T0000893;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000893;transcript_name=HG00140_ch_T0000893;gene_name=TSPY2;ID=exon:HG00140_ch_T0000893:1;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9885762	9885889	.	-	.	source_transcript=ENST00000470569.1;source_transcript_name=TSPY2-205;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000470569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000470569.1;transcript_id=HG00140_ch_T0000893;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000893;transcript_name=HG00140_ch_T0000893;gene_name=TSPY2;ID=intron:HG00140_ch_T0000893:1;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9885890	9885967	.	-	.	source_transcript=ENST00000470569.1;source_transcript_name=TSPY2-205;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000470569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000470569.1;transcript_id=HG00140_ch_T0000893;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000893;transcript_name=HG00140_ch_T0000893;gene_name=TSPY2;ID=exon:HG00140_ch_T0000893:2;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9885968	9886568	.	-	.	source_transcript=ENST00000470569.1;source_transcript_name=TSPY2-205;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000470569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000470569.1;transcript_id=HG00140_ch_T0000893;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000893;transcript_name=HG00140_ch_T0000893;gene_name=TSPY2;ID=intron:HG00140_ch_T0000893:2;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9886569	9887054	.	-	.	source_transcript=ENST00000470569.1;source_transcript_name=TSPY2-205;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000470569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000470569.1;transcript_id=HG00140_ch_T0000893;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000893;transcript_name=HG00140_ch_T0000893;gene_name=TSPY2;ID=exon:HG00140_ch_T0000893:3;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9884305	9887100	100	-	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9;transcript_id=HG00140_ch_T0000894;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_G0000285;transcript_name=HG00140_ch_T0000894;gene_name=TSPY2;ID=HG00140_ch_T0000894;Name=TSPY2
HG00140_chrY	CAT	exon	9884305	9884520	.	-	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9;transcript_id=HG00140_ch_T0000894;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000894;transcript_name=HG00140_ch_T0000894;gene_name=TSPY2;ID=exon:HG00140_ch_T0000894:0;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9884498	9884520	.	-	2	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9;transcript_id=HG00140_ch_T0000894;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000894;transcript_name=HG00140_ch_T0000894;gene_name=TSPY2;ID=CDS:HG00140_ch_T0000894:0;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	9884498	9884500	.	-	0	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9;transcript_id=HG00140_ch_T0000894;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000894;transcript_name=HG00140_ch_T0000894;gene_name=TSPY2;ID=stop_codon:HG00140_ch_T0000894;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9884521	9885214	.	-	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9;transcript_id=HG00140_ch_T0000894;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000894;transcript_name=HG00140_ch_T0000894;gene_name=TSPY2;ID=intron:HG00140_ch_T0000894:0;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9885215	9885296	.	-	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9;transcript_id=HG00140_ch_T0000894;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000894;transcript_name=HG00140_ch_T0000894;gene_name=TSPY2;ID=exon:HG00140_ch_T0000894:1;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9885215	9885296	.	-	0	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9;transcript_id=HG00140_ch_T0000894;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000894;transcript_name=HG00140_ch_T0000894;gene_name=TSPY2;ID=CDS:HG00140_ch_T0000894:1;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9885297	9885402	.	-	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9;transcript_id=HG00140_ch_T0000894;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000894;transcript_name=HG00140_ch_T0000894;gene_name=TSPY2;ID=intron:HG00140_ch_T0000894:1;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9885403	9885548	.	-	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9;transcript_id=HG00140_ch_T0000894;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000894;transcript_name=HG00140_ch_T0000894;gene_name=TSPY2;ID=exon:HG00140_ch_T0000894:2;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9885403	9885548	.	-	2	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9;transcript_id=HG00140_ch_T0000894;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000894;transcript_name=HG00140_ch_T0000894;gene_name=TSPY2;ID=CDS:HG00140_ch_T0000894:2;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9885549	9885649	.	-	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9;transcript_id=HG00140_ch_T0000894;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000894;transcript_name=HG00140_ch_T0000894;gene_name=TSPY2;ID=intron:HG00140_ch_T0000894:2;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9885650	9885761	.	-	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9;transcript_id=HG00140_ch_T0000894;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000894;transcript_name=HG00140_ch_T0000894;gene_name=TSPY2;ID=exon:HG00140_ch_T0000894:3;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9885650	9885761	.	-	0	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9;transcript_id=HG00140_ch_T0000894;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000894;transcript_name=HG00140_ch_T0000894;gene_name=TSPY2;ID=CDS:HG00140_ch_T0000894:3;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9885762	9885889	.	-	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9;transcript_id=HG00140_ch_T0000894;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000894;transcript_name=HG00140_ch_T0000894;gene_name=TSPY2;ID=intron:HG00140_ch_T0000894:3;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9885890	9885967	.	-	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9;transcript_id=HG00140_ch_T0000894;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000894;transcript_name=HG00140_ch_T0000894;gene_name=TSPY2;ID=exon:HG00140_ch_T0000894:4;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9885890	9885967	.	-	0	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9;transcript_id=HG00140_ch_T0000894;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000894;transcript_name=HG00140_ch_T0000894;gene_name=TSPY2;ID=CDS:HG00140_ch_T0000894:4;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9885968	9886568	.	-	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9;transcript_id=HG00140_ch_T0000894;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000894;transcript_name=HG00140_ch_T0000894;gene_name=TSPY2;ID=intron:HG00140_ch_T0000894:4;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9886569	9887100	.	-	.	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9;transcript_id=HG00140_ch_T0000894;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000894;transcript_name=HG00140_ch_T0000894;gene_name=TSPY2;ID=exon:HG00140_ch_T0000894:5;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9886569	9887054	.	-	0	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9;transcript_id=HG00140_ch_T0000894;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000894;transcript_name=HG00140_ch_T0000894;gene_name=TSPY2;ID=CDS:HG00140_ch_T0000894:5;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	9887052	9887054	.	-	0	source_transcript=ENST00000320701.9;source_transcript_name=TSPY2-201;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000320701.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000320701.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000320701.9;transcript_id=HG00140_ch_T0000894;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000894;transcript_name=HG00140_ch_T0000894;gene_name=TSPY2;ID=start_codon:HG00140_ch_T0000894;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9884311	9887054	100	-	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1;transcript_id=HG00140_ch_T0000895;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_G0000285;transcript_name=HG00140_ch_T0000895;gene_name=TSPY2;ID=HG00140_ch_T0000895;Name=TSPY2
HG00140_chrY	CAT	exon	9884311	9884520	.	-	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1;transcript_id=HG00140_ch_T0000895;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000895;transcript_name=HG00140_ch_T0000895;gene_name=TSPY2;ID=exon:HG00140_ch_T0000895:0;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9884521	9885214	.	-	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1;transcript_id=HG00140_ch_T0000895;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000895;transcript_name=HG00140_ch_T0000895;gene_name=TSPY2;ID=intron:HG00140_ch_T0000895:0;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9885215	9885307	.	-	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1;transcript_id=HG00140_ch_T0000895;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000895;transcript_name=HG00140_ch_T0000895;gene_name=TSPY2;ID=exon:HG00140_ch_T0000895:1;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9885245	9885307	.	-	0	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1;transcript_id=HG00140_ch_T0000895;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000895;transcript_name=HG00140_ch_T0000895;gene_name=TSPY2;ID=CDS:HG00140_ch_T0000895:0;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	9885245	9885247	.	-	0	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1;transcript_id=HG00140_ch_T0000895;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000895;transcript_name=HG00140_ch_T0000895;gene_name=TSPY2;ID=stop_codon:HG00140_ch_T0000895;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9885308	9885402	.	-	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1;transcript_id=HG00140_ch_T0000895;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000895;transcript_name=HG00140_ch_T0000895;gene_name=TSPY2;ID=intron:HG00140_ch_T0000895:1;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9885403	9885548	.	-	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1;transcript_id=HG00140_ch_T0000895;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000895;transcript_name=HG00140_ch_T0000895;gene_name=TSPY2;ID=exon:HG00140_ch_T0000895:2;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9885403	9885548	.	-	2	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1;transcript_id=HG00140_ch_T0000895;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000895;transcript_name=HG00140_ch_T0000895;gene_name=TSPY2;ID=CDS:HG00140_ch_T0000895:1;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9885549	9885649	.	-	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1;transcript_id=HG00140_ch_T0000895;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000895;transcript_name=HG00140_ch_T0000895;gene_name=TSPY2;ID=intron:HG00140_ch_T0000895:2;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9885650	9885761	.	-	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1;transcript_id=HG00140_ch_T0000895;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000895;transcript_name=HG00140_ch_T0000895;gene_name=TSPY2;ID=exon:HG00140_ch_T0000895:3;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9885650	9885761	.	-	0	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1;transcript_id=HG00140_ch_T0000895;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000895;transcript_name=HG00140_ch_T0000895;gene_name=TSPY2;ID=CDS:HG00140_ch_T0000895:2;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9885762	9885889	.	-	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1;transcript_id=HG00140_ch_T0000895;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000895;transcript_name=HG00140_ch_T0000895;gene_name=TSPY2;ID=intron:HG00140_ch_T0000895:3;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9885890	9885967	.	-	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1;transcript_id=HG00140_ch_T0000895;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000895;transcript_name=HG00140_ch_T0000895;gene_name=TSPY2;ID=exon:HG00140_ch_T0000895:4;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9885890	9885967	.	-	0	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1;transcript_id=HG00140_ch_T0000895;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000895;transcript_name=HG00140_ch_T0000895;gene_name=TSPY2;ID=CDS:HG00140_ch_T0000895:3;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9885968	9886568	.	-	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1;transcript_id=HG00140_ch_T0000895;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000895;transcript_name=HG00140_ch_T0000895;gene_name=TSPY2;ID=intron:HG00140_ch_T0000895:4;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9886569	9887054	.	-	.	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1;transcript_id=HG00140_ch_T0000895;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000895;transcript_name=HG00140_ch_T0000895;gene_name=TSPY2;ID=exon:HG00140_ch_T0000895:5;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9886569	9887054	.	-	0	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1;transcript_id=HG00140_ch_T0000895;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000895;transcript_name=HG00140_ch_T0000895;gene_name=TSPY2;ID=CDS:HG00140_ch_T0000895:4;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	9887052	9887054	.	-	0	source_transcript=ENST00000383042.1;source_transcript_name=TSPY2-202;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000383042.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000383042.1;transcript_id=HG00140_ch_T0000895;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000895;transcript_name=HG00140_ch_T0000895;gene_name=TSPY2;ID=start_codon:HG00140_ch_T0000895;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9884319	9885700	1000	-	.	source_transcript=ENST00000464674.1;source_transcript_name=TSPY2-204;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000464674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000464674.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000464674.1;transcript_id=HG00140_ch_T0000896;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_G0000285;transcript_name=HG00140_ch_T0000896;gene_name=TSPY2;ID=HG00140_ch_T0000896;Name=TSPY2
HG00140_chrY	CAT	exon	9884319	9884520	.	-	.	source_transcript=ENST00000464674.1;source_transcript_name=TSPY2-204;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000464674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000464674.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000464674.1;transcript_id=HG00140_ch_T0000896;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000896;transcript_name=HG00140_ch_T0000896;gene_name=TSPY2;ID=exon:HG00140_ch_T0000896:0;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9884521	9885214	.	-	.	source_transcript=ENST00000464674.1;source_transcript_name=TSPY2-204;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000464674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000464674.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000464674.1;transcript_id=HG00140_ch_T0000896;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000896;transcript_name=HG00140_ch_T0000896;gene_name=TSPY2;ID=intron:HG00140_ch_T0000896:0;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9885215	9885296	.	-	.	source_transcript=ENST00000464674.1;source_transcript_name=TSPY2-204;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000464674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000464674.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000464674.1;transcript_id=HG00140_ch_T0000896;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000896;transcript_name=HG00140_ch_T0000896;gene_name=TSPY2;ID=exon:HG00140_ch_T0000896:1;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9885297	9885402	.	-	.	source_transcript=ENST00000464674.1;source_transcript_name=TSPY2-204;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000464674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000464674.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000464674.1;transcript_id=HG00140_ch_T0000896;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000896;transcript_name=HG00140_ch_T0000896;gene_name=TSPY2;ID=intron:HG00140_ch_T0000896:1;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9885403	9885700	.	-	.	source_transcript=ENST00000464674.1;source_transcript_name=TSPY2-204;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000464674.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000464674.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000464674.1;transcript_id=HG00140_ch_T0000896;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000896;transcript_name=HG00140_ch_T0000896;gene_name=TSPY2;ID=exon:HG00140_ch_T0000896:2;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9884431	9887100	100	-	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5;transcript_id=HG00140_ch_T0000897;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_G0000285;transcript_name=HG00140_ch_T0000897;gene_name=TSPY2;ID=HG00140_ch_T0000897;Name=TSPY2
HG00140_chrY	CAT	exon	9884431	9884520	.	-	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5;transcript_id=HG00140_ch_T0000897;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000897;transcript_name=HG00140_ch_T0000897;gene_name=TSPY2;ID=exon:HG00140_ch_T0000897:0;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9884498	9884520	.	-	2	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5;transcript_id=HG00140_ch_T0000897;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000897;transcript_name=HG00140_ch_T0000897;gene_name=TSPY2;ID=CDS:HG00140_ch_T0000897:0;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	9884498	9884500	.	-	0	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5;transcript_id=HG00140_ch_T0000897;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000897;transcript_name=HG00140_ch_T0000897;gene_name=TSPY2;ID=stop_codon:HG00140_ch_T0000897;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9884521	9885214	.	-	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5;transcript_id=HG00140_ch_T0000897;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000897;transcript_name=HG00140_ch_T0000897;gene_name=TSPY2;ID=intron:HG00140_ch_T0000897:0;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9885215	9885296	.	-	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5;transcript_id=HG00140_ch_T0000897;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000897;transcript_name=HG00140_ch_T0000897;gene_name=TSPY2;ID=exon:HG00140_ch_T0000897:1;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9885215	9885296	.	-	0	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5;transcript_id=HG00140_ch_T0000897;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000897;transcript_name=HG00140_ch_T0000897;gene_name=TSPY2;ID=CDS:HG00140_ch_T0000897:1;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9885297	9885402	.	-	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5;transcript_id=HG00140_ch_T0000897;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000897;transcript_name=HG00140_ch_T0000897;gene_name=TSPY2;ID=intron:HG00140_ch_T0000897:1;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9885403	9885548	.	-	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5;transcript_id=HG00140_ch_T0000897;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000897;transcript_name=HG00140_ch_T0000897;gene_name=TSPY2;ID=exon:HG00140_ch_T0000897:2;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9885403	9885548	.	-	2	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5;transcript_id=HG00140_ch_T0000897;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000897;transcript_name=HG00140_ch_T0000897;gene_name=TSPY2;ID=CDS:HG00140_ch_T0000897:2;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9885549	9885649	.	-	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5;transcript_id=HG00140_ch_T0000897;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000897;transcript_name=HG00140_ch_T0000897;gene_name=TSPY2;ID=intron:HG00140_ch_T0000897:2;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9885650	9885761	.	-	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5;transcript_id=HG00140_ch_T0000897;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000897;transcript_name=HG00140_ch_T0000897;gene_name=TSPY2;ID=exon:HG00140_ch_T0000897:3;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9885650	9885761	.	-	0	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5;transcript_id=HG00140_ch_T0000897;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000897;transcript_name=HG00140_ch_T0000897;gene_name=TSPY2;ID=CDS:HG00140_ch_T0000897:3;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9885762	9885889	.	-	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5;transcript_id=HG00140_ch_T0000897;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000897;transcript_name=HG00140_ch_T0000897;gene_name=TSPY2;ID=intron:HG00140_ch_T0000897:3;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9885890	9885967	.	-	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5;transcript_id=HG00140_ch_T0000897;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000897;transcript_name=HG00140_ch_T0000897;gene_name=TSPY2;ID=exon:HG00140_ch_T0000897:4;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9885890	9885967	.	-	0	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5;transcript_id=HG00140_ch_T0000897;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000897;transcript_name=HG00140_ch_T0000897;gene_name=TSPY2;ID=CDS:HG00140_ch_T0000897:4;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9885968	9886568	.	-	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5;transcript_id=HG00140_ch_T0000897;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000897;transcript_name=HG00140_ch_T0000897;gene_name=TSPY2;ID=intron:HG00140_ch_T0000897:4;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9886569	9886706	.	-	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5;transcript_id=HG00140_ch_T0000897;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000897;transcript_name=HG00140_ch_T0000897;gene_name=TSPY2;ID=exon:HG00140_ch_T0000897:5;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9886569	9886706	.	-	0	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5;transcript_id=HG00140_ch_T0000897;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000897;transcript_name=HG00140_ch_T0000897;gene_name=TSPY2;ID=CDS:HG00140_ch_T0000897:5;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9886707	9886967	.	-	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5;transcript_id=HG00140_ch_T0000897;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000897;transcript_name=HG00140_ch_T0000897;gene_name=TSPY2;ID=intron:HG00140_ch_T0000897:5;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9886968	9887100	.	-	.	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5;transcript_id=HG00140_ch_T0000897;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000897;transcript_name=HG00140_ch_T0000897;gene_name=TSPY2;ID=exon:HG00140_ch_T0000897:6;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	9886968	9887054	.	-	0	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5;transcript_id=HG00140_ch_T0000897;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000897;transcript_name=HG00140_ch_T0000897;gene_name=TSPY2;ID=CDS:HG00140_ch_T0000897:6;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	9887052	9887054	.	-	0	source_transcript=ENST00000429039.5;source_transcript_name=TSPY2-203;source_gene=ENSG00000168757.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000168757.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000429039.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000429039.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=ENST00000429039.5;transcript_id=HG00140_ch_T0000897;gene_id=HG00140_ch_G0000285;Parent=HG00140_ch_T0000897;transcript_name=HG00140_ch_T0000897;gene_name=TSPY2;ID=start_codon:HG00140_ch_T0000897;Name=TSPY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	9887232	9892050	.	+	.	source_gene_common_name=ENSG00000290369;source_gene=ENSG00000290369.2;gene_id=HG00140_ch_G0000286;gene_biotype=lncRNA;gene_name=ENSG00000290369;gene_sources=liftoff;ID=HG00140_ch_G0000286;Name=ENSG00000290369
HG00140_chrY	CAT	transcript	9887232	9891871	1000	+	.	source_transcript=ENST00000451467.2;source_transcript_name=ENST00000451467;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451467.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000451467.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00140_ch_T0000898;gene_id=HG00140_ch_G0000286;Parent=HG00140_ch_G0000286;transcript_name=HG00140_ch_T0000898;gene_name=ENSG00000290369;ID=HG00140_ch_T0000898;Name=ENSG00000290369
HG00140_chrY	CAT	exon	9887232	9887417	.	+	.	source_transcript=ENST00000451467.2;source_transcript_name=ENST00000451467;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451467.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000451467.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00140_ch_T0000898;gene_id=HG00140_ch_G0000286;Parent=HG00140_ch_T0000898;transcript_name=HG00140_ch_T0000898;gene_name=ENSG00000290369;ID=exon:HG00140_ch_T0000898:0;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9887418	9889352	.	+	.	source_transcript=ENST00000451467.2;source_transcript_name=ENST00000451467;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451467.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000451467.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00140_ch_T0000898;gene_id=HG00140_ch_G0000286;Parent=HG00140_ch_T0000898;transcript_name=HG00140_ch_T0000898;gene_name=ENSG00000290369;ID=intron:HG00140_ch_T0000898:0;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9889353	9889475	.	+	.	source_transcript=ENST00000451467.2;source_transcript_name=ENST00000451467;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451467.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000451467.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00140_ch_T0000898;gene_id=HG00140_ch_G0000286;Parent=HG00140_ch_T0000898;transcript_name=HG00140_ch_T0000898;gene_name=ENSG00000290369;ID=exon:HG00140_ch_T0000898:1;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9889476	9889670	.	+	.	source_transcript=ENST00000451467.2;source_transcript_name=ENST00000451467;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451467.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000451467.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00140_ch_T0000898;gene_id=HG00140_ch_G0000286;Parent=HG00140_ch_T0000898;transcript_name=HG00140_ch_T0000898;gene_name=ENSG00000290369;ID=intron:HG00140_ch_T0000898:1;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9889671	9889760	.	+	.	source_transcript=ENST00000451467.2;source_transcript_name=ENST00000451467;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451467.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000451467.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00140_ch_T0000898;gene_id=HG00140_ch_G0000286;Parent=HG00140_ch_T0000898;transcript_name=HG00140_ch_T0000898;gene_name=ENSG00000290369;ID=exon:HG00140_ch_T0000898:2;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9889761	9889873	.	+	.	source_transcript=ENST00000451467.2;source_transcript_name=ENST00000451467;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451467.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000451467.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00140_ch_T0000898;gene_id=HG00140_ch_G0000286;Parent=HG00140_ch_T0000898;transcript_name=HG00140_ch_T0000898;gene_name=ENSG00000290369;ID=intron:HG00140_ch_T0000898:2;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9889874	9890019	.	+	.	source_transcript=ENST00000451467.2;source_transcript_name=ENST00000451467;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451467.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000451467.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00140_ch_T0000898;gene_id=HG00140_ch_G0000286;Parent=HG00140_ch_T0000898;transcript_name=HG00140_ch_T0000898;gene_name=ENSG00000290369;ID=exon:HG00140_ch_T0000898:3;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9890020	9890559	.	+	.	source_transcript=ENST00000451467.2;source_transcript_name=ENST00000451467;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451467.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000451467.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00140_ch_T0000898;gene_id=HG00140_ch_G0000286;Parent=HG00140_ch_T0000898;transcript_name=HG00140_ch_T0000898;gene_name=ENSG00000290369;ID=intron:HG00140_ch_T0000898:3;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9890560	9891871	.	+	.	source_transcript=ENST00000451467.2;source_transcript_name=ENST00000451467;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000451467.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000451467.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00140_ch_T0000898;gene_id=HG00140_ch_G0000286;Parent=HG00140_ch_T0000898;transcript_name=HG00140_ch_T0000898;gene_name=ENSG00000290369;ID=exon:HG00140_ch_T0000898:4;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9887243	9892050	1000	+	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00140_ch_T0000899;gene_id=HG00140_ch_G0000286;Parent=HG00140_ch_G0000286;transcript_name=HG00140_ch_T0000899;gene_name=ENSG00000290369;ID=HG00140_ch_T0000899;Name=ENSG00000290369
HG00140_chrY	CAT	exon	9887243	9887417	.	+	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00140_ch_T0000899;gene_id=HG00140_ch_G0000286;Parent=HG00140_ch_T0000899;transcript_name=HG00140_ch_T0000899;gene_name=ENSG00000290369;ID=exon:HG00140_ch_T0000899:0;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9887418	9889352	.	+	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00140_ch_T0000899;gene_id=HG00140_ch_G0000286;Parent=HG00140_ch_T0000899;transcript_name=HG00140_ch_T0000899;gene_name=ENSG00000290369;ID=intron:HG00140_ch_T0000899:0;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9889353	9889475	.	+	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00140_ch_T0000899;gene_id=HG00140_ch_G0000286;Parent=HG00140_ch_T0000899;transcript_name=HG00140_ch_T0000899;gene_name=ENSG00000290369;ID=exon:HG00140_ch_T0000899:1;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9889476	9889670	.	+	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00140_ch_T0000899;gene_id=HG00140_ch_G0000286;Parent=HG00140_ch_T0000899;transcript_name=HG00140_ch_T0000899;gene_name=ENSG00000290369;ID=intron:HG00140_ch_T0000899:1;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9889671	9889760	.	+	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00140_ch_T0000899;gene_id=HG00140_ch_G0000286;Parent=HG00140_ch_T0000899;transcript_name=HG00140_ch_T0000899;gene_name=ENSG00000290369;ID=exon:HG00140_ch_T0000899:2;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9889761	9889873	.	+	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00140_ch_T0000899;gene_id=HG00140_ch_G0000286;Parent=HG00140_ch_T0000899;transcript_name=HG00140_ch_T0000899;gene_name=ENSG00000290369;ID=intron:HG00140_ch_T0000899:2;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9889874	9890019	.	+	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00140_ch_T0000899;gene_id=HG00140_ch_G0000286;Parent=HG00140_ch_T0000899;transcript_name=HG00140_ch_T0000899;gene_name=ENSG00000290369;ID=exon:HG00140_ch_T0000899:3;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9890020	9890792	.	+	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00140_ch_T0000899;gene_id=HG00140_ch_G0000286;Parent=HG00140_ch_T0000899;transcript_name=HG00140_ch_T0000899;gene_name=ENSG00000290369;ID=intron:HG00140_ch_T0000899:3;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9890793	9890900	.	+	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00140_ch_T0000899;gene_id=HG00140_ch_G0000286;Parent=HG00140_ch_T0000899;transcript_name=HG00140_ch_T0000899;gene_name=ENSG00000290369;ID=exon:HG00140_ch_T0000899:4;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9890901	9891452	.	+	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00140_ch_T0000899;gene_id=HG00140_ch_G0000286;Parent=HG00140_ch_T0000899;transcript_name=HG00140_ch_T0000899;gene_name=ENSG00000290369;ID=intron:HG00140_ch_T0000899:4;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9891453	9892050	.	+	.	source_transcript=ENST00000748741.1;source_transcript_name=ENST00000748741;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00140_ch_T0000899;gene_id=HG00140_ch_G0000286;Parent=HG00140_ch_T0000899;transcript_name=HG00140_ch_T0000899;gene_name=ENSG00000290369;ID=exon:HG00140_ch_T0000899:5;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9887254	9891871	1000	+	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00140_ch_T0000900;gene_id=HG00140_ch_G0000286;Parent=HG00140_ch_G0000286;transcript_name=HG00140_ch_T0000900;gene_name=ENSG00000290369;ID=HG00140_ch_T0000900;Name=ENSG00000290369
HG00140_chrY	CAT	exon	9887254	9887417	.	+	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00140_ch_T0000900;gene_id=HG00140_ch_G0000286;Parent=HG00140_ch_T0000900;transcript_name=HG00140_ch_T0000900;gene_name=ENSG00000290369;ID=exon:HG00140_ch_T0000900:0;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9887418	9889352	.	+	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00140_ch_T0000900;gene_id=HG00140_ch_G0000286;Parent=HG00140_ch_T0000900;transcript_name=HG00140_ch_T0000900;gene_name=ENSG00000290369;ID=intron:HG00140_ch_T0000900:0;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9889353	9889475	.	+	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00140_ch_T0000900;gene_id=HG00140_ch_G0000286;Parent=HG00140_ch_T0000900;transcript_name=HG00140_ch_T0000900;gene_name=ENSG00000290369;ID=exon:HG00140_ch_T0000900:1;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9889476	9889674	.	+	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00140_ch_T0000900;gene_id=HG00140_ch_G0000286;Parent=HG00140_ch_T0000900;transcript_name=HG00140_ch_T0000900;gene_name=ENSG00000290369;ID=intron:HG00140_ch_T0000900:1;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9889675	9889760	.	+	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00140_ch_T0000900;gene_id=HG00140_ch_G0000286;Parent=HG00140_ch_T0000900;transcript_name=HG00140_ch_T0000900;gene_name=ENSG00000290369;ID=exon:HG00140_ch_T0000900:2;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9889761	9889873	.	+	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00140_ch_T0000900;gene_id=HG00140_ch_G0000286;Parent=HG00140_ch_T0000900;transcript_name=HG00140_ch_T0000900;gene_name=ENSG00000290369;ID=intron:HG00140_ch_T0000900:2;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9889874	9890019	.	+	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00140_ch_T0000900;gene_id=HG00140_ch_G0000286;Parent=HG00140_ch_T0000900;transcript_name=HG00140_ch_T0000900;gene_name=ENSG00000290369;ID=exon:HG00140_ch_T0000900:3;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9890020	9890559	.	+	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00140_ch_T0000900;gene_id=HG00140_ch_G0000286;Parent=HG00140_ch_T0000900;transcript_name=HG00140_ch_T0000900;gene_name=ENSG00000290369;ID=intron:HG00140_ch_T0000900:3;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9890560	9890612	.	+	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00140_ch_T0000900;gene_id=HG00140_ch_G0000286;Parent=HG00140_ch_T0000900;transcript_name=HG00140_ch_T0000900;gene_name=ENSG00000290369;ID=exon:HG00140_ch_T0000900:4;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9890613	9890792	.	+	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00140_ch_T0000900;gene_id=HG00140_ch_G0000286;Parent=HG00140_ch_T0000900;transcript_name=HG00140_ch_T0000900;gene_name=ENSG00000290369;ID=intron:HG00140_ch_T0000900:4;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9890793	9890900	.	+	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00140_ch_T0000900;gene_id=HG00140_ch_G0000286;Parent=HG00140_ch_T0000900;transcript_name=HG00140_ch_T0000900;gene_name=ENSG00000290369;ID=exon:HG00140_ch_T0000900:5;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9890901	9891452	.	+	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00140_ch_T0000900;gene_id=HG00140_ch_G0000286;Parent=HG00140_ch_T0000900;transcript_name=HG00140_ch_T0000900;gene_name=ENSG00000290369;ID=intron:HG00140_ch_T0000900:5;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9891453	9891871	.	+	.	source_transcript=ENST00000748742.1;source_transcript_name=ENST00000748742;source_gene=ENSG00000290369.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290369.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000748742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000748742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290369;transcript_id=HG00140_ch_T0000900;gene_id=HG00140_ch_G0000286;Parent=HG00140_ch_T0000900;transcript_name=HG00140_ch_T0000900;gene_name=ENSG00000290369;ID=exon:HG00140_ch_T0000900:6;Name=ENSG00000290369;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	9888040	9890019	.	+	.	source_gene_common_name=TTTY23B;source_gene=ENSG00000250204.3;gene_id=HG00140_ch_G0000287;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TTTY23B;gene_sources=liftoff;ID=HG00140_ch_G0000287;Name=TTTY23B
HG00140_chrY	CAT	transcript	9888040	9890019	1000	+	.	source_transcript=ENST00000442790.2;source_transcript_name=TTTY23B-201;source_gene=ENSG00000250204.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000250204.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442790.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442790.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;transcript_id=HG00140_ch_T0000901;gene_id=HG00140_ch_G0000287;Parent=HG00140_ch_G0000287;transcript_name=HG00140_ch_T0000901;gene_name=TTTY23B;ID=HG00140_ch_T0000901;Name=TTTY23B
HG00140_chrY	CAT	exon	9888040	9888351	.	+	.	source_transcript=ENST00000442790.2;source_transcript_name=TTTY23B-201;source_gene=ENSG00000250204.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000250204.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442790.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442790.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;transcript_id=HG00140_ch_T0000901;gene_id=HG00140_ch_G0000287;Parent=HG00140_ch_T0000901;transcript_name=HG00140_ch_T0000901;gene_name=TTTY23B;ID=exon:HG00140_ch_T0000901:0;Name=TTTY23B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9888352	9889670	.	+	.	source_transcript=ENST00000442790.2;source_transcript_name=TTTY23B-201;source_gene=ENSG00000250204.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000250204.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442790.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442790.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;transcript_id=HG00140_ch_T0000901;gene_id=HG00140_ch_G0000287;Parent=HG00140_ch_T0000901;transcript_name=HG00140_ch_T0000901;gene_name=TTTY23B;ID=intron:HG00140_ch_T0000901:0;Name=TTTY23B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9889671	9889761	.	+	.	source_transcript=ENST00000442790.2;source_transcript_name=TTTY23B-201;source_gene=ENSG00000250204.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000250204.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442790.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442790.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;transcript_id=HG00140_ch_T0000901;gene_id=HG00140_ch_G0000287;Parent=HG00140_ch_T0000901;transcript_name=HG00140_ch_T0000901;gene_name=TTTY23B;ID=exon:HG00140_ch_T0000901:1;Name=TTTY23B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9889762	9889873	.	+	.	source_transcript=ENST00000442790.2;source_transcript_name=TTTY23B-201;source_gene=ENSG00000250204.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000250204.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442790.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442790.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;transcript_id=HG00140_ch_T0000901;gene_id=HG00140_ch_G0000287;Parent=HG00140_ch_T0000901;transcript_name=HG00140_ch_T0000901;gene_name=TTTY23B;ID=intron:HG00140_ch_T0000901:1;Name=TTTY23B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9889874	9890019	.	+	.	source_transcript=ENST00000442790.2;source_transcript_name=TTTY23B-201;source_gene=ENSG00000250204.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000250204.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442790.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442790.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;transcript_id=HG00140_ch_T0000901;gene_id=HG00140_ch_G0000287;Parent=HG00140_ch_T0000901;transcript_name=HG00140_ch_T0000901;gene_name=TTTY23B;ID=exon:HG00140_ch_T0000901:2;Name=TTTY23B;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	9930479	9938347	.	+	.	source_gene_common_name=RBMY2OP;source_gene=ENSG00000234950.1;gene_id=HG00140_ch_G0000288;gene_biotype=unprocessed_pseudogene;gene_name=RBMY2OP;gene_sources=liftoff,transMap_pairwise;ID=HG00140_ch_G0000288;Name=RBMY2OP
HG00140_chrY	CAT	transcript	9930479	9938347	1000	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=HG00140_ch_T0000902;gene_id=HG00140_ch_G0000288;Parent=HG00140_ch_G0000288;transcript_name=HG00140_ch_T0000902;gene_name=RBMY2OP;ID=HG00140_ch_T0000902;Name=RBMY2OP
HG00140_chrY	CAT	exon	9930479	9930587	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=HG00140_ch_T0000902;gene_id=HG00140_ch_G0000288;Parent=HG00140_ch_T0000902;transcript_name=HG00140_ch_T0000902;gene_name=RBMY2OP;ID=exon:HG00140_ch_T0000902:0;Name=RBMY2OP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9930588	9931046	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=HG00140_ch_T0000902;gene_id=HG00140_ch_G0000288;Parent=HG00140_ch_T0000902;transcript_name=HG00140_ch_T0000902;gene_name=RBMY2OP;ID=intron:HG00140_ch_T0000902:0;Name=RBMY2OP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9931047	9931122	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=HG00140_ch_T0000902;gene_id=HG00140_ch_G0000288;Parent=HG00140_ch_T0000902;transcript_name=HG00140_ch_T0000902;gene_name=RBMY2OP;ID=exon:HG00140_ch_T0000902:1;Name=RBMY2OP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9931123	9936363	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=HG00140_ch_T0000902;gene_id=HG00140_ch_G0000288;Parent=HG00140_ch_T0000902;transcript_name=HG00140_ch_T0000902;gene_name=RBMY2OP;ID=intron:HG00140_ch_T0000902:1;Name=RBMY2OP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9936364	9936476	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=HG00140_ch_T0000902;gene_id=HG00140_ch_G0000288;Parent=HG00140_ch_T0000902;transcript_name=HG00140_ch_T0000902;gene_name=RBMY2OP;ID=exon:HG00140_ch_T0000902:2;Name=RBMY2OP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9936477	9937342	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=HG00140_ch_T0000902;gene_id=HG00140_ch_G0000288;Parent=HG00140_ch_T0000902;transcript_name=HG00140_ch_T0000902;gene_name=RBMY2OP;ID=intron:HG00140_ch_T0000902:2;Name=RBMY2OP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9937343	9937453	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=HG00140_ch_T0000902;gene_id=HG00140_ch_G0000288;Parent=HG00140_ch_T0000902;transcript_name=HG00140_ch_T0000902;gene_name=RBMY2OP;ID=exon:HG00140_ch_T0000902:3;Name=RBMY2OP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9937454	9937533	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=HG00140_ch_T0000902;gene_id=HG00140_ch_G0000288;Parent=HG00140_ch_T0000902;transcript_name=HG00140_ch_T0000902;gene_name=RBMY2OP;ID=intron:HG00140_ch_T0000902:3;Name=RBMY2OP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9937534	9937622	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=HG00140_ch_T0000902;gene_id=HG00140_ch_G0000288;Parent=HG00140_ch_T0000902;transcript_name=HG00140_ch_T0000902;gene_name=RBMY2OP;ID=exon:HG00140_ch_T0000902:4;Name=RBMY2OP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9937623	9938035	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=HG00140_ch_T0000902;gene_id=HG00140_ch_G0000288;Parent=HG00140_ch_T0000902;transcript_name=HG00140_ch_T0000902;gene_name=RBMY2OP;ID=intron:HG00140_ch_T0000902:4;Name=RBMY2OP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9938036	9938347	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=HG00140_ch_T0000902;gene_id=HG00140_ch_G0000288;Parent=HG00140_ch_T0000902;transcript_name=HG00140_ch_T0000902;gene_name=RBMY2OP;ID=exon:HG00140_ch_T0000902:5;Name=RBMY2OP;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9930479	9938347	1000	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000447105.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=HG00140_ch_T0000903;gene_id=HG00140_ch_G0000288;Parent=HG00140_ch_G0000288;transcript_name=HG00140_ch_T0000903;gene_name=RBMY2OP;ID=HG00140_ch_T0000903;Name=RBMY2OP
HG00140_chrY	CAT	exon	9930479	9930587	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000447105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=HG00140_ch_T0000903;gene_id=HG00140_ch_G0000288;Parent=HG00140_ch_T0000903;transcript_name=HG00140_ch_T0000903;gene_name=RBMY2OP;ID=exon:HG00140_ch_T0000903:0;Name=RBMY2OP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9930588	9931046	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000447105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=HG00140_ch_T0000903;gene_id=HG00140_ch_G0000288;Parent=HG00140_ch_T0000903;transcript_name=HG00140_ch_T0000903;gene_name=RBMY2OP;ID=intron:HG00140_ch_T0000903:0;Name=RBMY2OP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9931047	9931122	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000447105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=HG00140_ch_T0000903;gene_id=HG00140_ch_G0000288;Parent=HG00140_ch_T0000903;transcript_name=HG00140_ch_T0000903;gene_name=RBMY2OP;ID=exon:HG00140_ch_T0000903:1;Name=RBMY2OP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9931123	9936363	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000447105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=HG00140_ch_T0000903;gene_id=HG00140_ch_G0000288;Parent=HG00140_ch_T0000903;transcript_name=HG00140_ch_T0000903;gene_name=RBMY2OP;ID=intron:HG00140_ch_T0000903:1;Name=RBMY2OP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9936364	9936476	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000447105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=HG00140_ch_T0000903;gene_id=HG00140_ch_G0000288;Parent=HG00140_ch_T0000903;transcript_name=HG00140_ch_T0000903;gene_name=RBMY2OP;ID=exon:HG00140_ch_T0000903:2;Name=RBMY2OP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9936477	9937342	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000447105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=HG00140_ch_T0000903;gene_id=HG00140_ch_G0000288;Parent=HG00140_ch_T0000903;transcript_name=HG00140_ch_T0000903;gene_name=RBMY2OP;ID=intron:HG00140_ch_T0000903:2;Name=RBMY2OP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9937343	9937622	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000447105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=HG00140_ch_T0000903;gene_id=HG00140_ch_G0000288;Parent=HG00140_ch_T0000903;transcript_name=HG00140_ch_T0000903;gene_name=RBMY2OP;ID=exon:HG00140_ch_T0000903:3;Name=RBMY2OP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9937623	9938035	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000447105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=HG00140_ch_T0000903;gene_id=HG00140_ch_G0000288;Parent=HG00140_ch_T0000903;transcript_name=HG00140_ch_T0000903;gene_name=RBMY2OP;ID=intron:HG00140_ch_T0000903:3;Name=RBMY2OP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9938036	9938347	.	+	.	source_transcript=ENST00000447105.1;source_transcript_name=RBMY2OP-201;source_gene=ENSG00000234950.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234950.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447105.1;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000447105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2OP;transcript_id=HG00140_ch_T0000903;gene_id=HG00140_ch_G0000288;Parent=HG00140_ch_T0000903;transcript_name=HG00140_ch_T0000903;gene_name=RBMY2OP;ID=exon:HG00140_ch_T0000903:4;Name=RBMY2OP;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	9933456	10014233	.	-	.	source_gene_common_name=ENSG00000290344;source_gene=ENSG00000290344.2;gene_id=HG00140_ch_G0000289;gene_biotype=lncRNA;gene_name=ENSG00000290344;gene_sources=liftoff;ID=HG00140_ch_G0000289;Name=ENSG00000290344
HG00140_chrY	CAT	transcript	9933456	10014230	1000	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000904;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_G0000289;transcript_name=HG00140_ch_T0000904;gene_name=ENSG00000290344;ID=HG00140_ch_T0000904;Name=ENSG00000290344
HG00140_chrY	CAT	exon	9933456	9933616	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000904;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000904;transcript_name=HG00140_ch_T0000904;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000904:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9933617	9968112	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000904;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000904;transcript_name=HG00140_ch_T0000904;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000904:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9968113	9968162	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000904;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000904;transcript_name=HG00140_ch_T0000904;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000904:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9968163	9974520	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000904;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000904;transcript_name=HG00140_ch_T0000904;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000904:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9974521	9974639	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000904;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000904;transcript_name=HG00140_ch_T0000904;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000904:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9974640	10002125	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000904;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000904;transcript_name=HG00140_ch_T0000904;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000904:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10002126	10002214	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000904;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000904;transcript_name=HG00140_ch_T0000904;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000904:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10002215	10002300	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000904;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000904;transcript_name=HG00140_ch_T0000904;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000904:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10002301	10002411	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000904;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000904;transcript_name=HG00140_ch_T0000904;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000904:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10002412	10005440	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000904;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000904;transcript_name=HG00140_ch_T0000904;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000904:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10005441	10005549	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000904;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000904;transcript_name=HG00140_ch_T0000904;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000904:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10005550	10009319	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000904;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000904;transcript_name=HG00140_ch_T0000904;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000904:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10009320	10009497	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000904;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000904;transcript_name=HG00140_ch_T0000904;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000904:6;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10009498	10012485	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000904;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000904;transcript_name=HG00140_ch_T0000904;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000904:6;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10012486	10012586	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000904;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000904;transcript_name=HG00140_ch_T0000904;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000904:7;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10012587	10013018	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000904;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000904;transcript_name=HG00140_ch_T0000904;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000904:7;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10013019	10013118	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000904;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000904;transcript_name=HG00140_ch_T0000904;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000904:8;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10013119	10014084	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000904;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000904;transcript_name=HG00140_ch_T0000904;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000904:8;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10014085	10014230	.	-	.	source_transcript=ENST00000651645.1;source_transcript_name=ENST00000651645;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000904;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000904;transcript_name=HG00140_ch_T0000904;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000904:9;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9933456	10014196	1000	-	.	source_transcript=ENST00000787703.1;source_transcript_name=ENST00000787703;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787703.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000905;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_G0000289;transcript_name=HG00140_ch_T0000905;gene_name=ENSG00000290344;ID=HG00140_ch_T0000905;Name=ENSG00000290344
HG00140_chrY	CAT	exon	9933456	9933616	.	-	.	source_transcript=ENST00000787703.1;source_transcript_name=ENST00000787703;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787703.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000905;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000905;transcript_name=HG00140_ch_T0000905;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000905:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9933617	10002125	.	-	.	source_transcript=ENST00000787703.1;source_transcript_name=ENST00000787703;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787703.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000905;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000905;transcript_name=HG00140_ch_T0000905;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000905:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10002126	10002214	.	-	.	source_transcript=ENST00000787703.1;source_transcript_name=ENST00000787703;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787703.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000905;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000905;transcript_name=HG00140_ch_T0000905;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000905:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10002215	10002300	.	-	.	source_transcript=ENST00000787703.1;source_transcript_name=ENST00000787703;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787703.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000905;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000905;transcript_name=HG00140_ch_T0000905;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000905:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10002301	10002411	.	-	.	source_transcript=ENST00000787703.1;source_transcript_name=ENST00000787703;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787703.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000905;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000905;transcript_name=HG00140_ch_T0000905;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000905:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10002412	10005440	.	-	.	source_transcript=ENST00000787703.1;source_transcript_name=ENST00000787703;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787703.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000905;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000905;transcript_name=HG00140_ch_T0000905;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000905:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10005441	10005549	.	-	.	source_transcript=ENST00000787703.1;source_transcript_name=ENST00000787703;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787703.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000905;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000905;transcript_name=HG00140_ch_T0000905;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000905:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10005550	10014084	.	-	.	source_transcript=ENST00000787703.1;source_transcript_name=ENST00000787703;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787703.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000905;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000905;transcript_name=HG00140_ch_T0000905;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000905:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10014085	10014196	.	-	.	source_transcript=ENST00000787703.1;source_transcript_name=ENST00000787703;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787703.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787703.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000905;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000905;transcript_name=HG00140_ch_T0000905;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000905:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9970553	10014196	1000	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000906;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_G0000289;transcript_name=HG00140_ch_T0000906;gene_name=ENSG00000290344;ID=HG00140_ch_T0000906;Name=ENSG00000290344
HG00140_chrY	CAT	exon	9970553	9971134	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000906;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000906;transcript_name=HG00140_ch_T0000906;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000906:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9971135	9974520	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000906;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000906;transcript_name=HG00140_ch_T0000906;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000906:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	9974521	9974639	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000906;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000906;transcript_name=HG00140_ch_T0000906;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000906:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9974640	10002125	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000906;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000906;transcript_name=HG00140_ch_T0000906;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000906:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10002126	10002214	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000906;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000906;transcript_name=HG00140_ch_T0000906;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000906:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10002215	10002300	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000906;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000906;transcript_name=HG00140_ch_T0000906;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000906:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10002301	10002411	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000906;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000906;transcript_name=HG00140_ch_T0000906;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000906:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10002412	10005440	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000906;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000906;transcript_name=HG00140_ch_T0000906;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000906:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10005441	10005549	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000906;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000906;transcript_name=HG00140_ch_T0000906;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000906:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10005550	10013018	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000906;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000906;transcript_name=HG00140_ch_T0000906;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000906:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10013019	10013118	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000906;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000906;transcript_name=HG00140_ch_T0000906;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000906:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10013119	10014084	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000906;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000906;transcript_name=HG00140_ch_T0000906;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000906:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10014085	10014196	.	-	.	source_transcript=ENST00000787704.1;source_transcript_name=ENST00000787704;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000906;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000906;transcript_name=HG00140_ch_T0000906;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000906:6;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9975065	10014196	1000	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000907;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_G0000289;transcript_name=HG00140_ch_T0000907;gene_name=ENSG00000290344;ID=HG00140_ch_T0000907;Name=ENSG00000290344
HG00140_chrY	CAT	exon	9975065	9975392	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000907;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000907;transcript_name=HG00140_ch_T0000907;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000907:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9975393	10002125	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000907;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000907;transcript_name=HG00140_ch_T0000907;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000907:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10002126	10002214	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000907;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000907;transcript_name=HG00140_ch_T0000907;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000907:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10002215	10002300	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000907;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000907;transcript_name=HG00140_ch_T0000907;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000907:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10002301	10002411	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000907;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000907;transcript_name=HG00140_ch_T0000907;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000907:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10002412	10005440	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000907;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000907;transcript_name=HG00140_ch_T0000907;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000907:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10005441	10005549	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000907;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000907;transcript_name=HG00140_ch_T0000907;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000907:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10005550	10009319	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000907;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000907;transcript_name=HG00140_ch_T0000907;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000907:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10009320	10009497	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000907;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000907;transcript_name=HG00140_ch_T0000907;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000907:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10009498	10012485	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000907;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000907;transcript_name=HG00140_ch_T0000907;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000907:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10012486	10012586	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000907;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000907;transcript_name=HG00140_ch_T0000907;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000907:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10012587	10013018	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000907;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000907;transcript_name=HG00140_ch_T0000907;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000907:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10013019	10013118	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000907;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000907;transcript_name=HG00140_ch_T0000907;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000907:6;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10013119	10014084	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000907;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000907;transcript_name=HG00140_ch_T0000907;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000907:6;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10014085	10014196	.	-	.	source_transcript=ENST00000787707.1;source_transcript_name=ENST00000787707;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000907;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000907;transcript_name=HG00140_ch_T0000907;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000907:7;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9975065	10014194	1000	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000908;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_G0000289;transcript_name=HG00140_ch_T0000908;gene_name=ENSG00000290344;ID=HG00140_ch_T0000908;Name=ENSG00000290344
HG00140_chrY	CAT	exon	9975065	9975392	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000908;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000908;transcript_name=HG00140_ch_T0000908;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000908:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9975393	10002125	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000908;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000908;transcript_name=HG00140_ch_T0000908;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000908:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10002126	10002214	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000908;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000908;transcript_name=HG00140_ch_T0000908;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000908:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10002215	10002300	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000908;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000908;transcript_name=HG00140_ch_T0000908;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000908:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10002301	10002411	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000908;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000908;transcript_name=HG00140_ch_T0000908;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000908:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10002412	10005440	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000908;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000908;transcript_name=HG00140_ch_T0000908;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000908:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10005441	10005549	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000908;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000908;transcript_name=HG00140_ch_T0000908;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000908:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10005550	10009319	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000908;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000908;transcript_name=HG00140_ch_T0000908;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000908:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10009320	10009497	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000908;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000908;transcript_name=HG00140_ch_T0000908;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000908:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10009498	10014053	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000908;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000908;transcript_name=HG00140_ch_T0000908;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000908:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10014054	10014194	.	-	.	source_transcript=ENST00000787708.1;source_transcript_name=ENST00000787708;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000908;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000908;transcript_name=HG00140_ch_T0000908;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000908:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9975068	10014212	1000	-	.	source_transcript=ENST00000787706.1;source_transcript_name=ENST00000787706;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787706.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000909;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_G0000289;transcript_name=HG00140_ch_T0000909;gene_name=ENSG00000290344;ID=HG00140_ch_T0000909;Name=ENSG00000290344
HG00140_chrY	CAT	exon	9975068	9975392	.	-	.	source_transcript=ENST00000787706.1;source_transcript_name=ENST00000787706;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000909;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000909;transcript_name=HG00140_ch_T0000909;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000909:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9975393	10002125	.	-	.	source_transcript=ENST00000787706.1;source_transcript_name=ENST00000787706;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000909;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000909;transcript_name=HG00140_ch_T0000909;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000909:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10002126	10002214	.	-	.	source_transcript=ENST00000787706.1;source_transcript_name=ENST00000787706;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000909;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000909;transcript_name=HG00140_ch_T0000909;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000909:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10002215	10002300	.	-	.	source_transcript=ENST00000787706.1;source_transcript_name=ENST00000787706;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000909;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000909;transcript_name=HG00140_ch_T0000909;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000909:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10002301	10002411	.	-	.	source_transcript=ENST00000787706.1;source_transcript_name=ENST00000787706;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000909;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000909;transcript_name=HG00140_ch_T0000909;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000909:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10002412	10005440	.	-	.	source_transcript=ENST00000787706.1;source_transcript_name=ENST00000787706;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000909;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000909;transcript_name=HG00140_ch_T0000909;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000909:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10005441	10005549	.	-	.	source_transcript=ENST00000787706.1;source_transcript_name=ENST00000787706;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000909;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000909;transcript_name=HG00140_ch_T0000909;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000909:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10005550	10014053	.	-	.	source_transcript=ENST00000787706.1;source_transcript_name=ENST00000787706;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000909;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000909;transcript_name=HG00140_ch_T0000909;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000909:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10014054	10014212	.	-	.	source_transcript=ENST00000787706.1;source_transcript_name=ENST00000787706;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000909;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000909;transcript_name=HG00140_ch_T0000909;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000909:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9975079	10014233	1000	-	.	source_transcript=ENST00000787705.1;source_transcript_name=ENST00000787705;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787705.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000910;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_G0000289;transcript_name=HG00140_ch_T0000910;gene_name=ENSG00000290344;ID=HG00140_ch_T0000910;Name=ENSG00000290344
HG00140_chrY	CAT	exon	9975079	9975392	.	-	.	source_transcript=ENST00000787705.1;source_transcript_name=ENST00000787705;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000910;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000910;transcript_name=HG00140_ch_T0000910;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000910:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9975393	10002125	.	-	.	source_transcript=ENST00000787705.1;source_transcript_name=ENST00000787705;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000910;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000910;transcript_name=HG00140_ch_T0000910;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000910:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10002126	10002214	.	-	.	source_transcript=ENST00000787705.1;source_transcript_name=ENST00000787705;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000910;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000910;transcript_name=HG00140_ch_T0000910;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000910:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10002215	10002300	.	-	.	source_transcript=ENST00000787705.1;source_transcript_name=ENST00000787705;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000910;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000910;transcript_name=HG00140_ch_T0000910;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000910:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10002301	10002411	.	-	.	source_transcript=ENST00000787705.1;source_transcript_name=ENST00000787705;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000910;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000910;transcript_name=HG00140_ch_T0000910;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000910:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10002412	10005440	.	-	.	source_transcript=ENST00000787705.1;source_transcript_name=ENST00000787705;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000910;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000910;transcript_name=HG00140_ch_T0000910;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000910:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10005441	10005549	.	-	.	source_transcript=ENST00000787705.1;source_transcript_name=ENST00000787705;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000910;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000910;transcript_name=HG00140_ch_T0000910;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000910:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10005550	10014084	.	-	.	source_transcript=ENST00000787705.1;source_transcript_name=ENST00000787705;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000910;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000910;transcript_name=HG00140_ch_T0000910;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000910:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10014085	10014233	.	-	.	source_transcript=ENST00000787705.1;source_transcript_name=ENST00000787705;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000910;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000910;transcript_name=HG00140_ch_T0000910;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000910:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9975079	10014196	1000	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000911;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_G0000289;transcript_name=HG00140_ch_T0000911;gene_name=ENSG00000290344;ID=HG00140_ch_T0000911;Name=ENSG00000290344
HG00140_chrY	CAT	exon	9975079	9975392	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000911;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000911;transcript_name=HG00140_ch_T0000911;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000911:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9975393	10002125	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000911;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000911;transcript_name=HG00140_ch_T0000911;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000911:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10002126	10002214	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000911;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000911;transcript_name=HG00140_ch_T0000911;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000911:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10002215	10002300	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000911;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000911;transcript_name=HG00140_ch_T0000911;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000911:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10002301	10002411	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000911;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000911;transcript_name=HG00140_ch_T0000911;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000911:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10002412	10005440	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000911;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000911;transcript_name=HG00140_ch_T0000911;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000911:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10005441	10005549	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000911;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000911;transcript_name=HG00140_ch_T0000911;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000911:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10005550	10009319	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000911;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000911;transcript_name=HG00140_ch_T0000911;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000911:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10009320	10009497	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000911;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000911;transcript_name=HG00140_ch_T0000911;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000911:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10009498	10013018	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000911;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000911;transcript_name=HG00140_ch_T0000911;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000911:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10013019	10013118	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000911;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000911;transcript_name=HG00140_ch_T0000911;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000911:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10013119	10014084	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000911;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000911;transcript_name=HG00140_ch_T0000911;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000911:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10014085	10014196	.	-	.	source_transcript=ENST00000787709.1;source_transcript_name=ENST00000787709;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787709.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787709.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000911;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000911;transcript_name=HG00140_ch_T0000911;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000911:6;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9983521	10014236	1000	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000912;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_G0000289;transcript_name=HG00140_ch_T0000912;gene_name=ENSG00000290344;ID=HG00140_ch_T0000912;Name=ENSG00000290344
HG00140_chrY	CAT	exon	9983521	9984107	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000912;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000912;transcript_name=HG00140_ch_T0000912;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000912:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9984108	10002125	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000912;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000912;transcript_name=HG00140_ch_T0000912;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000912:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10002126	10002214	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000912;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000912;transcript_name=HG00140_ch_T0000912;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000912:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10002215	10002300	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000912;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000912;transcript_name=HG00140_ch_T0000912;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000912:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10002301	10002411	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000912;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000912;transcript_name=HG00140_ch_T0000912;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000912:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10002412	10005440	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000912;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000912;transcript_name=HG00140_ch_T0000912;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000912:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10005441	10005549	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000912;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000912;transcript_name=HG00140_ch_T0000912;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000912:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10005550	10009319	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000912;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000912;transcript_name=HG00140_ch_T0000912;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000912:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10009320	10009497	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000912;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000912;transcript_name=HG00140_ch_T0000912;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000912:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10009498	10012485	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000912;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000912;transcript_name=HG00140_ch_T0000912;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000912:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10012486	10012586	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000912;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000912;transcript_name=HG00140_ch_T0000912;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000912:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10012587	10013018	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000912;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000912;transcript_name=HG00140_ch_T0000912;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000912:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10013019	10013118	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000912;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000912;transcript_name=HG00140_ch_T0000912;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000912:6;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10013119	10014053	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000912;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000912;transcript_name=HG00140_ch_T0000912;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000912:6;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10014054	10014236	.	-	.	source_transcript=ENST00000787710.1;source_transcript_name=ENST00000787710;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787710.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787710.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000912;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000912;transcript_name=HG00140_ch_T0000912;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000912:7;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9983897	10014262	1000	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000913;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_G0000289;transcript_name=HG00140_ch_T0000913;gene_name=ENSG00000290344;ID=HG00140_ch_T0000913;Name=ENSG00000290344
HG00140_chrY	CAT	exon	9983897	9984107	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000913;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000913;transcript_name=HG00140_ch_T0000913;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000913:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9984108	10002125	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000913;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000913;transcript_name=HG00140_ch_T0000913;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000913:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10002126	10002214	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000913;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000913;transcript_name=HG00140_ch_T0000913;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000913:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10002215	10002300	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000913;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000913;transcript_name=HG00140_ch_T0000913;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000913:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10002301	10002411	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000913;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000913;transcript_name=HG00140_ch_T0000913;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000913:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10002412	10005440	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000913;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000913;transcript_name=HG00140_ch_T0000913;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000913:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10005441	10005549	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000913;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000913;transcript_name=HG00140_ch_T0000913;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000913:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10005550	10009319	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000913;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000913;transcript_name=HG00140_ch_T0000913;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000913:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10009320	10009497	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000913;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000913;transcript_name=HG00140_ch_T0000913;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000913:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10009498	10013018	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000913;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000913;transcript_name=HG00140_ch_T0000913;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000913:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10013019	10013118	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000913;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000913;transcript_name=HG00140_ch_T0000913;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000913:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10013119	10014053	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000913;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000913;transcript_name=HG00140_ch_T0000913;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000913:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10014054	10014262	.	-	.	source_transcript=ENST00000787711.1;source_transcript_name=ENST00000787711;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787711.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787711.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000913;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000913;transcript_name=HG00140_ch_T0000913;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000913:6;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	9992011	10014210	1000	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000914;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_G0000289;transcript_name=HG00140_ch_T0000914;gene_name=ENSG00000290344;ID=HG00140_ch_T0000914;Name=ENSG00000290344
HG00140_chrY	CAT	exon	9992011	9992275	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000914;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000914;transcript_name=HG00140_ch_T0000914;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000914:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	9992276	10002125	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000914;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000914;transcript_name=HG00140_ch_T0000914;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000914:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10002126	10002214	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000914;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000914;transcript_name=HG00140_ch_T0000914;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000914:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10002215	10002300	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000914;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000914;transcript_name=HG00140_ch_T0000914;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000914:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10002301	10002411	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000914;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000914;transcript_name=HG00140_ch_T0000914;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000914:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10002412	10005440	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000914;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000914;transcript_name=HG00140_ch_T0000914;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000914:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10005441	10005549	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000914;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000914;transcript_name=HG00140_ch_T0000914;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000914:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10005550	10009319	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000914;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000914;transcript_name=HG00140_ch_T0000914;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000914:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10009320	10009497	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000914;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000914;transcript_name=HG00140_ch_T0000914;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000914:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10009498	10012485	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000914;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000914;transcript_name=HG00140_ch_T0000914;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000914:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10012486	10012586	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000914;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000914;transcript_name=HG00140_ch_T0000914;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000914:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10012587	10013018	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000914;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000914;transcript_name=HG00140_ch_T0000914;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000914:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10013019	10013118	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000914;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000914;transcript_name=HG00140_ch_T0000914;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000914:6;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10013119	10014053	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000914;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000914;transcript_name=HG00140_ch_T0000914;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000914:6;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10014054	10014210	.	-	.	source_transcript=ENST00000787712.1;source_transcript_name=ENST00000787712;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787712.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000914;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000914;transcript_name=HG00140_ch_T0000914;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000914:7;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	10001135	10014210	1000	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000915;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_G0000289;transcript_name=HG00140_ch_T0000915;gene_name=ENSG00000290344;ID=HG00140_ch_T0000915;Name=ENSG00000290344
HG00140_chrY	CAT	exon	10001135	10001524	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000915;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000915;transcript_name=HG00140_ch_T0000915;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000915:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10001525	10002125	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000915;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000915;transcript_name=HG00140_ch_T0000915;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000915:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10002126	10002214	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000915;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000915;transcript_name=HG00140_ch_T0000915;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000915:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10002215	10002300	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000915;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000915;transcript_name=HG00140_ch_T0000915;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000915:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10002301	10002411	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000915;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000915;transcript_name=HG00140_ch_T0000915;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000915:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10002412	10005440	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000915;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000915;transcript_name=HG00140_ch_T0000915;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000915:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10005441	10005549	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000915;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000915;transcript_name=HG00140_ch_T0000915;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000915:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10005550	10009319	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000915;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000915;transcript_name=HG00140_ch_T0000915;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000915:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10009320	10009497	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000915;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000915;transcript_name=HG00140_ch_T0000915;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000915:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10009498	10013018	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000915;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000915;transcript_name=HG00140_ch_T0000915;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000915:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10013019	10013118	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000915;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000915;transcript_name=HG00140_ch_T0000915;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000915:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10013119	10014053	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000915;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000915;transcript_name=HG00140_ch_T0000915;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000915:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10014054	10014210	.	-	.	source_transcript=ENST00000787717.1;source_transcript_name=ENST00000787717;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787717.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787717.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000915;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000915;transcript_name=HG00140_ch_T0000915;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000915:6;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	10001137	10014215	1000	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000916;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_G0000289;transcript_name=HG00140_ch_T0000916;gene_name=ENSG00000290344;ID=HG00140_ch_T0000916;Name=ENSG00000290344
HG00140_chrY	CAT	exon	10001137	10001524	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000916;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000916;transcript_name=HG00140_ch_T0000916;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000916:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10001525	10002125	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000916;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000916;transcript_name=HG00140_ch_T0000916;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000916:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10002126	10002214	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000916;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000916;transcript_name=HG00140_ch_T0000916;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000916:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10002215	10002300	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000916;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000916;transcript_name=HG00140_ch_T0000916;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000916:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10002301	10002411	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000916;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000916;transcript_name=HG00140_ch_T0000916;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000916:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10002412	10005440	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000916;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000916;transcript_name=HG00140_ch_T0000916;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000916:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10005441	10005549	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000916;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000916;transcript_name=HG00140_ch_T0000916;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000916:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10005550	10009319	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000916;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000916;transcript_name=HG00140_ch_T0000916;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000916:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10009320	10009497	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000916;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000916;transcript_name=HG00140_ch_T0000916;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000916:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10009498	10014053	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000916;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000916;transcript_name=HG00140_ch_T0000916;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000916:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10014054	10014215	.	-	.	source_transcript=ENST00000787716.1;source_transcript_name=ENST00000787716;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787716.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787716.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000916;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000916;transcript_name=HG00140_ch_T0000916;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000916:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	10001137	10014233	1000	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000917;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_G0000289;transcript_name=HG00140_ch_T0000917;gene_name=ENSG00000290344;ID=HG00140_ch_T0000917;Name=ENSG00000290344
HG00140_chrY	CAT	exon	10001137	10001524	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000917;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000917;transcript_name=HG00140_ch_T0000917;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000917:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10001525	10002125	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000917;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000917;transcript_name=HG00140_ch_T0000917;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000917:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10002126	10002214	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000917;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000917;transcript_name=HG00140_ch_T0000917;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000917:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10002215	10002300	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000917;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000917;transcript_name=HG00140_ch_T0000917;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000917:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10002301	10002411	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000917;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000917;transcript_name=HG00140_ch_T0000917;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000917:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10002412	10005440	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000917;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000917;transcript_name=HG00140_ch_T0000917;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000917:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10005441	10005549	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000917;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000917;transcript_name=HG00140_ch_T0000917;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000917:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10005550	10009319	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000917;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000917;transcript_name=HG00140_ch_T0000917;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000917:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10009320	10009497	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000917;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000917;transcript_name=HG00140_ch_T0000917;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000917:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10009498	10013018	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000917;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000917;transcript_name=HG00140_ch_T0000917;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000917:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10013019	10013118	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000917;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000917;transcript_name=HG00140_ch_T0000917;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000917:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10013119	10014084	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000917;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000917;transcript_name=HG00140_ch_T0000917;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000917:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10014085	10014233	.	-	.	source_transcript=ENST00000787713.1;source_transcript_name=ENST00000787713;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787713.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000917;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000917;transcript_name=HG00140_ch_T0000917;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000917:6;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	10001137	10014215	1000	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000918;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_G0000289;transcript_name=HG00140_ch_T0000918;gene_name=ENSG00000290344;ID=HG00140_ch_T0000918;Name=ENSG00000290344
HG00140_chrY	CAT	exon	10001137	10001524	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000918;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000918;transcript_name=HG00140_ch_T0000918;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000918:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10001525	10002125	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000918;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000918;transcript_name=HG00140_ch_T0000918;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000918:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10002126	10002214	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000918;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000918;transcript_name=HG00140_ch_T0000918;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000918:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10002215	10002300	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000918;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000918;transcript_name=HG00140_ch_T0000918;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000918:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10002301	10002411	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000918;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000918;transcript_name=HG00140_ch_T0000918;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000918:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10002412	10005440	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000918;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000918;transcript_name=HG00140_ch_T0000918;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000918:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10005441	10005549	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000918;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000918;transcript_name=HG00140_ch_T0000918;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000918:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10005550	10013018	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000918;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000918;transcript_name=HG00140_ch_T0000918;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000918:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10013019	10013118	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000918;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000918;transcript_name=HG00140_ch_T0000918;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000918:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10013119	10014084	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000918;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000918;transcript_name=HG00140_ch_T0000918;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000918:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10014085	10014215	.	-	.	source_transcript=ENST00000787715.1;source_transcript_name=ENST00000787715;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787715.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787715.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000918;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000918;transcript_name=HG00140_ch_T0000918;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000918:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	10001137	10014233	1000	-	.	source_transcript=ENST00000787714.1;source_transcript_name=ENST00000787714;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787714.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000919;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_G0000289;transcript_name=HG00140_ch_T0000919;gene_name=ENSG00000290344;ID=HG00140_ch_T0000919;Name=ENSG00000290344
HG00140_chrY	CAT	exon	10001137	10001524	.	-	.	source_transcript=ENST00000787714.1;source_transcript_name=ENST00000787714;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787714.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000919;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000919;transcript_name=HG00140_ch_T0000919;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000919:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10001525	10002125	.	-	.	source_transcript=ENST00000787714.1;source_transcript_name=ENST00000787714;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787714.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000919;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000919;transcript_name=HG00140_ch_T0000919;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000919:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10002126	10002214	.	-	.	source_transcript=ENST00000787714.1;source_transcript_name=ENST00000787714;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787714.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000919;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000919;transcript_name=HG00140_ch_T0000919;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000919:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10002215	10002300	.	-	.	source_transcript=ENST00000787714.1;source_transcript_name=ENST00000787714;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787714.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000919;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000919;transcript_name=HG00140_ch_T0000919;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000919:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10002301	10002411	.	-	.	source_transcript=ENST00000787714.1;source_transcript_name=ENST00000787714;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787714.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000919;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000919;transcript_name=HG00140_ch_T0000919;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000919:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10002412	10005440	.	-	.	source_transcript=ENST00000787714.1;source_transcript_name=ENST00000787714;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787714.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000919;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000919;transcript_name=HG00140_ch_T0000919;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000919:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10005441	10005549	.	-	.	source_transcript=ENST00000787714.1;source_transcript_name=ENST00000787714;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787714.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000919;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000919;transcript_name=HG00140_ch_T0000919;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000919:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10005550	10014084	.	-	.	source_transcript=ENST00000787714.1;source_transcript_name=ENST00000787714;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787714.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000919;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000919;transcript_name=HG00140_ch_T0000919;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000919:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10014085	10014233	.	-	.	source_transcript=ENST00000787714.1;source_transcript_name=ENST00000787714;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787714.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787714.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000919;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000919;transcript_name=HG00140_ch_T0000919;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000919:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	10001137	10014211	1000	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000920;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_G0000289;transcript_name=HG00140_ch_T0000920;gene_name=ENSG00000290344;ID=HG00140_ch_T0000920;Name=ENSG00000290344
HG00140_chrY	CAT	exon	10001137	10001524	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000920;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000920;transcript_name=HG00140_ch_T0000920;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000920:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10001525	10002125	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000920;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000920;transcript_name=HG00140_ch_T0000920;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000920:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10002126	10002214	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000920;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000920;transcript_name=HG00140_ch_T0000920;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000920:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10002215	10002300	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000920;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000920;transcript_name=HG00140_ch_T0000920;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000920:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10002301	10002411	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000920;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000920;transcript_name=HG00140_ch_T0000920;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000920:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10002412	10005440	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000920;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000920;transcript_name=HG00140_ch_T0000920;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000920:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10005441	10005549	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000920;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000920;transcript_name=HG00140_ch_T0000920;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000920:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10005550	10009319	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000920;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000920;transcript_name=HG00140_ch_T0000920;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000920:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10009320	10009497	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000920;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000920;transcript_name=HG00140_ch_T0000920;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000920:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10009498	10012485	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000920;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000920;transcript_name=HG00140_ch_T0000920;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000920:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10012486	10012586	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000920;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000920;transcript_name=HG00140_ch_T0000920;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000920:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10012587	10013018	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000920;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000920;transcript_name=HG00140_ch_T0000920;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000920:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10013019	10013118	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000920;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000920;transcript_name=HG00140_ch_T0000920;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000920:6;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10013119	10014084	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000920;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000920;transcript_name=HG00140_ch_T0000920;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000920:6;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10014085	10014211	.	-	.	source_transcript=ENST00000787718.1;source_transcript_name=ENST00000787718;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787718.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787718.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000920;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000920;transcript_name=HG00140_ch_T0000920;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000920:7;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	10001318	10014194	1000	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000921;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_G0000289;transcript_name=HG00140_ch_T0000921;gene_name=ENSG00000290344;ID=HG00140_ch_T0000921;Name=ENSG00000290344
HG00140_chrY	CAT	exon	10001318	10001524	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000921;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000921;transcript_name=HG00140_ch_T0000921;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000921:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10001525	10002125	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000921;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000921;transcript_name=HG00140_ch_T0000921;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000921:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10002126	10002214	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000921;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000921;transcript_name=HG00140_ch_T0000921;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000921:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10002215	10002300	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000921;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000921;transcript_name=HG00140_ch_T0000921;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000921:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10002301	10002411	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000921;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000921;transcript_name=HG00140_ch_T0000921;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000921:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10002412	10005440	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000921;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000921;transcript_name=HG00140_ch_T0000921;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000921:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10005441	10005549	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000921;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000921;transcript_name=HG00140_ch_T0000921;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000921:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10005550	10013018	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000921;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000921;transcript_name=HG00140_ch_T0000921;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000921:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10013019	10013118	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000921;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000921;transcript_name=HG00140_ch_T0000921;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000921:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10013119	10014053	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000921;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000921;transcript_name=HG00140_ch_T0000921;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000921:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10014054	10014194	.	-	.	source_transcript=ENST00000787719.1;source_transcript_name=ENST00000787719;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000921;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000921;transcript_name=HG00140_ch_T0000921;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000921:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	10001902	10014215	1000	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000923;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_G0000289;transcript_name=HG00140_ch_T0000923;gene_name=ENSG00000290344;ID=HG00140_ch_T0000923;Name=ENSG00000290344
HG00140_chrY	CAT	exon	10001902	10002214	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000923;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000923;transcript_name=HG00140_ch_T0000923;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000923:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10002215	10002300	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000923;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000923;transcript_name=HG00140_ch_T0000923;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000923:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10002301	10002411	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000923;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000923;transcript_name=HG00140_ch_T0000923;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000923:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10002412	10005440	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000923;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000923;transcript_name=HG00140_ch_T0000923;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000923:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10005441	10005549	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000923;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000923;transcript_name=HG00140_ch_T0000923;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000923:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10005550	10009319	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000923;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000923;transcript_name=HG00140_ch_T0000923;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000923:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10009320	10009497	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000923;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000923;transcript_name=HG00140_ch_T0000923;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000923:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10009498	10012485	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000923;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000923;transcript_name=HG00140_ch_T0000923;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000923:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10012486	10012586	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000923;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000923;transcript_name=HG00140_ch_T0000923;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000923:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10012587	10013018	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000923;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000923;transcript_name=HG00140_ch_T0000923;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000923:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10013019	10013118	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000923;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000923;transcript_name=HG00140_ch_T0000923;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000923:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10013119	10014084	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000923;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000923;transcript_name=HG00140_ch_T0000923;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000923:5;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10014085	10014215	.	-	.	source_transcript=ENST00000787720.1;source_transcript_name=ENST00000787720;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000923;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000923;transcript_name=HG00140_ch_T0000923;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000923:6;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	10008259	10014208	1000	-	.	source_transcript=ENST00000787721.1;source_transcript_name=ENST00000787721;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787721.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000924;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_G0000289;transcript_name=HG00140_ch_T0000924;gene_name=ENSG00000290344;ID=HG00140_ch_T0000924;Name=ENSG00000290344
HG00140_chrY	CAT	exon	10008259	10008446	.	-	.	source_transcript=ENST00000787721.1;source_transcript_name=ENST00000787721;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000924;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000924;transcript_name=HG00140_ch_T0000924;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000924:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10008447	10009319	.	-	.	source_transcript=ENST00000787721.1;source_transcript_name=ENST00000787721;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000924;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000924;transcript_name=HG00140_ch_T0000924;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000924:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10009320	10009497	.	-	.	source_transcript=ENST00000787721.1;source_transcript_name=ENST00000787721;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000924;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000924;transcript_name=HG00140_ch_T0000924;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000924:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10009498	10012485	.	-	.	source_transcript=ENST00000787721.1;source_transcript_name=ENST00000787721;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000924;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000924;transcript_name=HG00140_ch_T0000924;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000924:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10012486	10012586	.	-	.	source_transcript=ENST00000787721.1;source_transcript_name=ENST00000787721;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000924;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000924;transcript_name=HG00140_ch_T0000924;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000924:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10012587	10013018	.	-	.	source_transcript=ENST00000787721.1;source_transcript_name=ENST00000787721;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000924;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000924;transcript_name=HG00140_ch_T0000924;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000924:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10013019	10013118	.	-	.	source_transcript=ENST00000787721.1;source_transcript_name=ENST00000787721;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000924;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000924;transcript_name=HG00140_ch_T0000924;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000924:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10013119	10014053	.	-	.	source_transcript=ENST00000787721.1;source_transcript_name=ENST00000787721;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000924;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000924;transcript_name=HG00140_ch_T0000924;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000924:3;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10014054	10014208	.	-	.	source_transcript=ENST00000787721.1;source_transcript_name=ENST00000787721;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000924;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000924;transcript_name=HG00140_ch_T0000924;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000924:4;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	10008786	10014198	1000	-	.	source_transcript=ENST00000787722.1;source_transcript_name=ENST00000787722;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787722.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000925;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_G0000289;transcript_name=HG00140_ch_T0000925;gene_name=ENSG00000290344;ID=HG00140_ch_T0000925;Name=ENSG00000290344
HG00140_chrY	CAT	exon	10008786	10009497	.	-	.	source_transcript=ENST00000787722.1;source_transcript_name=ENST00000787722;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000925;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000925;transcript_name=HG00140_ch_T0000925;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000925:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10009498	10013018	.	-	.	source_transcript=ENST00000787722.1;source_transcript_name=ENST00000787722;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000925;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000925;transcript_name=HG00140_ch_T0000925;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000925:0;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10013019	10013118	.	-	.	source_transcript=ENST00000787722.1;source_transcript_name=ENST00000787722;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000925;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000925;transcript_name=HG00140_ch_T0000925;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000925:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10013119	10014053	.	-	.	source_transcript=ENST00000787722.1;source_transcript_name=ENST00000787722;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000925;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000925;transcript_name=HG00140_ch_T0000925;gene_name=ENSG00000290344;ID=intron:HG00140_ch_T0000925:1;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10014054	10014198	.	-	.	source_transcript=ENST00000787722.1;source_transcript_name=ENST00000787722;source_gene=ENSG00000290344.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290344.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000787722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000787722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290344;transcript_id=HG00140_ch_T0000925;gene_id=HG00140_ch_G0000289;Parent=HG00140_ch_T0000925;transcript_name=HG00140_ch_T0000925;gene_name=ENSG00000290344;ID=exon:HG00140_ch_T0000925:2;Name=ENSG00000290344;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	10001420	10013118	.	-	.	source_gene_common_name=RBMY2QP;source_gene=ENSG00000236718.5;gene_id=HG00140_ch_G0000290;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY2QP;gene_sources=liftoff;ID=HG00140_ch_G0000290;Name=RBMY2QP
HG00140_chrY	CAT	transcript	10001420	10013118	1000	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=HG00140_ch_T0000922;gene_id=HG00140_ch_G0000290;Parent=HG00140_ch_G0000290;transcript_name=HG00140_ch_T0000922;gene_name=RBMY2QP;ID=HG00140_ch_T0000922;Name=RBMY2QP
HG00140_chrY	CAT	exon	10001420	10001720	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=HG00140_ch_T0000922;gene_id=HG00140_ch_G0000290;Parent=HG00140_ch_T0000922;transcript_name=HG00140_ch_T0000922;gene_name=RBMY2QP;ID=exon:HG00140_ch_T0000922:0;Name=RBMY2QP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10001721	10002125	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=HG00140_ch_T0000922;gene_id=HG00140_ch_G0000290;Parent=HG00140_ch_T0000922;transcript_name=HG00140_ch_T0000922;gene_name=RBMY2QP;ID=intron:HG00140_ch_T0000922:0;Name=RBMY2QP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10002126	10002214	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=HG00140_ch_T0000922;gene_id=HG00140_ch_G0000290;Parent=HG00140_ch_T0000922;transcript_name=HG00140_ch_T0000922;gene_name=RBMY2QP;ID=exon:HG00140_ch_T0000922:1;Name=RBMY2QP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10002215	10002300	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=HG00140_ch_T0000922;gene_id=HG00140_ch_G0000290;Parent=HG00140_ch_T0000922;transcript_name=HG00140_ch_T0000922;gene_name=RBMY2QP;ID=intron:HG00140_ch_T0000922:1;Name=RBMY2QP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10002301	10002411	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=HG00140_ch_T0000922;gene_id=HG00140_ch_G0000290;Parent=HG00140_ch_T0000922;transcript_name=HG00140_ch_T0000922;gene_name=RBMY2QP;ID=exon:HG00140_ch_T0000922:2;Name=RBMY2QP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10002412	10003287	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=HG00140_ch_T0000922;gene_id=HG00140_ch_G0000290;Parent=HG00140_ch_T0000922;transcript_name=HG00140_ch_T0000922;gene_name=RBMY2QP;ID=intron:HG00140_ch_T0000922:2;Name=RBMY2QP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10003288	10003402	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=HG00140_ch_T0000922;gene_id=HG00140_ch_G0000290;Parent=HG00140_ch_T0000922;transcript_name=HG00140_ch_T0000922;gene_name=RBMY2QP;ID=exon:HG00140_ch_T0000922:3;Name=RBMY2QP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10003403	10005440	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=HG00140_ch_T0000922;gene_id=HG00140_ch_G0000290;Parent=HG00140_ch_T0000922;transcript_name=HG00140_ch_T0000922;gene_name=RBMY2QP;ID=intron:HG00140_ch_T0000922:3;Name=RBMY2QP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10005441	10005592	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=HG00140_ch_T0000922;gene_id=HG00140_ch_G0000290;Parent=HG00140_ch_T0000922;transcript_name=HG00140_ch_T0000922;gene_name=RBMY2QP;ID=exon:HG00140_ch_T0000922:4;Name=RBMY2QP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10005593	10009319	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=HG00140_ch_T0000922;gene_id=HG00140_ch_G0000290;Parent=HG00140_ch_T0000922;transcript_name=HG00140_ch_T0000922;gene_name=RBMY2QP;ID=intron:HG00140_ch_T0000922:4;Name=RBMY2QP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10009320	10009497	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=HG00140_ch_T0000922;gene_id=HG00140_ch_G0000290;Parent=HG00140_ch_T0000922;transcript_name=HG00140_ch_T0000922;gene_name=RBMY2QP;ID=exon:HG00140_ch_T0000922:5;Name=RBMY2QP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10009498	10012485	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=HG00140_ch_T0000922;gene_id=HG00140_ch_G0000290;Parent=HG00140_ch_T0000922;transcript_name=HG00140_ch_T0000922;gene_name=RBMY2QP;ID=intron:HG00140_ch_T0000922:5;Name=RBMY2QP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10012486	10012586	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=HG00140_ch_T0000922;gene_id=HG00140_ch_G0000290;Parent=HG00140_ch_T0000922;transcript_name=HG00140_ch_T0000922;gene_name=RBMY2QP;ID=exon:HG00140_ch_T0000922:6;Name=RBMY2QP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10012587	10013018	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=HG00140_ch_T0000922;gene_id=HG00140_ch_G0000290;Parent=HG00140_ch_T0000922;transcript_name=HG00140_ch_T0000922;gene_name=RBMY2QP;ID=intron:HG00140_ch_T0000922:6;Name=RBMY2QP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10013019	10013118	.	-	.	source_transcript=ENST00000429799.1;source_transcript_name=RBMY2QP-201;source_gene=ENSG00000236718.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000236718.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000429799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2QP;transcript_id=HG00140_ch_T0000922;gene_id=HG00140_ch_G0000290;Parent=HG00140_ch_T0000922;transcript_name=HG00140_ch_T0000922;gene_name=RBMY2QP;ID=exon:HG00140_ch_T0000922:7;Name=RBMY2QP;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	10015126	10017306	.	+	.	source_gene_common_name=TSPY20P;source_gene=ENSG00000243643.1;alternative_source_transcripts=ENST00000450910.1;gene_id=HG00140_ch_G0000291;gene_biotype=unprocessed_pseudogene;gene_name=TSPY20P;gene_sources=liftoff;ID=HG00140_ch_G0000291;Name=TSPY20P
HG00140_chrY	CAT	transcript	10015126	10017306	1000	+	.	source_transcript=ENST00000450910.1;source_transcript_name=TSPY20P-201;source_gene=ENSG00000243643.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000243643.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450910.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450910.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY20P;alternative_source_transcripts=ENST00000450910.1;transcript_id=HG00140_ch_T0000926;gene_id=HG00140_ch_G0000291;Parent=HG00140_ch_G0000291;transcript_name=HG00140_ch_T0000926;gene_name=TSPY20P;ID=HG00140_ch_T0000926;Name=TSPY20P
HG00140_chrY	CAT	exon	10015126	10015483	.	+	.	source_transcript=ENST00000450910.1;source_transcript_name=TSPY20P-201;source_gene=ENSG00000243643.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000243643.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450910.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450910.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY20P;alternative_source_transcripts=ENST00000450910.1;transcript_id=HG00140_ch_T0000926;gene_id=HG00140_ch_G0000291;Parent=HG00140_ch_T0000926;transcript_name=HG00140_ch_T0000926;gene_name=TSPY20P;ID=exon:HG00140_ch_T0000926:0;Name=TSPY20P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10015484	10016829	.	+	.	source_transcript=ENST00000450910.1;source_transcript_name=TSPY20P-201;source_gene=ENSG00000243643.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000243643.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450910.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450910.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY20P;alternative_source_transcripts=ENST00000450910.1;transcript_id=HG00140_ch_T0000926;gene_id=HG00140_ch_G0000291;Parent=HG00140_ch_T0000926;transcript_name=HG00140_ch_T0000926;gene_name=TSPY20P;ID=intron:HG00140_ch_T0000926:0;Name=TSPY20P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10016830	10016898	.	+	.	source_transcript=ENST00000450910.1;source_transcript_name=TSPY20P-201;source_gene=ENSG00000243643.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000243643.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450910.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450910.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY20P;alternative_source_transcripts=ENST00000450910.1;transcript_id=HG00140_ch_T0000926;gene_id=HG00140_ch_G0000291;Parent=HG00140_ch_T0000926;transcript_name=HG00140_ch_T0000926;gene_name=TSPY20P;ID=exon:HG00140_ch_T0000926:1;Name=TSPY20P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10016899	10016993	.	+	.	source_transcript=ENST00000450910.1;source_transcript_name=TSPY20P-201;source_gene=ENSG00000243643.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000243643.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450910.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450910.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY20P;alternative_source_transcripts=ENST00000450910.1;transcript_id=HG00140_ch_T0000926;gene_id=HG00140_ch_G0000291;Parent=HG00140_ch_T0000926;transcript_name=HG00140_ch_T0000926;gene_name=TSPY20P;ID=intron:HG00140_ch_T0000926:1;Name=TSPY20P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10016994	10017139	.	+	.	source_transcript=ENST00000450910.1;source_transcript_name=TSPY20P-201;source_gene=ENSG00000243643.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000243643.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450910.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450910.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY20P;alternative_source_transcripts=ENST00000450910.1;transcript_id=HG00140_ch_T0000926;gene_id=HG00140_ch_G0000291;Parent=HG00140_ch_T0000926;transcript_name=HG00140_ch_T0000926;gene_name=TSPY20P;ID=exon:HG00140_ch_T0000926:2;Name=TSPY20P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10017140	10017249	.	+	.	source_transcript=ENST00000450910.1;source_transcript_name=TSPY20P-201;source_gene=ENSG00000243643.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000243643.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450910.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450910.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY20P;alternative_source_transcripts=ENST00000450910.1;transcript_id=HG00140_ch_T0000926;gene_id=HG00140_ch_G0000291;Parent=HG00140_ch_T0000926;transcript_name=HG00140_ch_T0000926;gene_name=TSPY20P;ID=intron:HG00140_ch_T0000926:2;Name=TSPY20P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10017250	10017306	.	+	.	source_transcript=ENST00000450910.1;source_transcript_name=TSPY20P-201;source_gene=ENSG00000243643.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000243643.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450910.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450910.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY20P;alternative_source_transcripts=ENST00000450910.1;transcript_id=HG00140_ch_T0000926;gene_id=HG00140_ch_G0000291;Parent=HG00140_ch_T0000926;transcript_name=HG00140_ch_T0000926;gene_name=TSPY20P;ID=exon:HG00140_ch_T0000926:3;Name=TSPY20P;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	10045485	10046317	.	-	.	source_gene_common_name=ENSG00000290378;source_gene=ENSG00000290378.1;gene_id=HG00140_ch_G0000292;gene_biotype=lncRNA;gene_name=ENSG00000290378;gene_sources=liftoff;ID=HG00140_ch_G0000292;Name=ENSG00000290378
HG00140_chrY	CAT	transcript	10045485	10046317	1000	-	.	source_transcript=ENST00000456541.1;source_transcript_name=ENST00000456541;source_gene=ENSG00000290378.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290378.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456541.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456541.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290378;transcript_id=HG00140_ch_T0000927;gene_id=HG00140_ch_G0000292;Parent=HG00140_ch_G0000292;transcript_name=HG00140_ch_T0000927;gene_name=ENSG00000290378;ID=HG00140_ch_T0000927;Name=ENSG00000290378
HG00140_chrY	CAT	exon	10045485	10045540	.	-	.	source_transcript=ENST00000456541.1;source_transcript_name=ENST00000456541;source_gene=ENSG00000290378.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290378.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456541.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290378;transcript_id=HG00140_ch_T0000927;gene_id=HG00140_ch_G0000292;Parent=HG00140_ch_T0000927;transcript_name=HG00140_ch_T0000927;gene_name=ENSG00000290378;ID=exon:HG00140_ch_T0000927:0;Name=ENSG00000290378;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10045541	10046231	.	-	.	source_transcript=ENST00000456541.1;source_transcript_name=ENST00000456541;source_gene=ENSG00000290378.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290378.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456541.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290378;transcript_id=HG00140_ch_T0000927;gene_id=HG00140_ch_G0000292;Parent=HG00140_ch_T0000927;transcript_name=HG00140_ch_T0000927;gene_name=ENSG00000290378;ID=intron:HG00140_ch_T0000927:0;Name=ENSG00000290378;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10046232	10046317	.	-	.	source_transcript=ENST00000456541.1;source_transcript_name=ENST00000456541;source_gene=ENSG00000290378.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290378.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456541.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290378;transcript_id=HG00140_ch_T0000927;gene_id=HG00140_ch_G0000292;Parent=HG00140_ch_T0000927;transcript_name=HG00140_ch_T0000927;gene_name=ENSG00000290378;ID=exon:HG00140_ch_T0000927:1;Name=ENSG00000290378;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	10045518	10048094	.	-	.	source_gene_common_name=TSPY5P;source_gene=ENSG00000225685.2;gene_id=HG00140_ch_G0000293;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TSPY5P;gene_sources=liftoff;ID=HG00140_ch_G0000293;Name=TSPY5P
HG00140_chrY	CAT	transcript	10045518	10048094	1000	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=HG00140_ch_T0000928;gene_id=HG00140_ch_G0000293;Parent=HG00140_ch_G0000293;transcript_name=HG00140_ch_T0000928;gene_name=TSPY5P;ID=HG00140_ch_T0000928;Name=TSPY5P
HG00140_chrY	CAT	exon	10045518	10045540	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=HG00140_ch_T0000928;gene_id=HG00140_ch_G0000293;Parent=HG00140_ch_T0000928;transcript_name=HG00140_ch_T0000928;gene_name=TSPY5P;ID=exon:HG00140_ch_T0000928:0;Name=TSPY5P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10045541	10046231	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=HG00140_ch_T0000928;gene_id=HG00140_ch_G0000293;Parent=HG00140_ch_T0000928;transcript_name=HG00140_ch_T0000928;gene_name=TSPY5P;ID=intron:HG00140_ch_T0000928:0;Name=TSPY5P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10046232	10046313	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=HG00140_ch_T0000928;gene_id=HG00140_ch_G0000293;Parent=HG00140_ch_T0000928;transcript_name=HG00140_ch_T0000928;gene_name=TSPY5P;ID=exon:HG00140_ch_T0000928:1;Name=TSPY5P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10046314	10046419	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=HG00140_ch_T0000928;gene_id=HG00140_ch_G0000293;Parent=HG00140_ch_T0000928;transcript_name=HG00140_ch_T0000928;gene_name=TSPY5P;ID=intron:HG00140_ch_T0000928:1;Name=TSPY5P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10046420	10046565	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=HG00140_ch_T0000928;gene_id=HG00140_ch_G0000293;Parent=HG00140_ch_T0000928;transcript_name=HG00140_ch_T0000928;gene_name=TSPY5P;ID=exon:HG00140_ch_T0000928:2;Name=TSPY5P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10046566	10046662	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=HG00140_ch_T0000928;gene_id=HG00140_ch_G0000293;Parent=HG00140_ch_T0000928;transcript_name=HG00140_ch_T0000928;gene_name=TSPY5P;ID=intron:HG00140_ch_T0000928:2;Name=TSPY5P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10046663	10046774	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=HG00140_ch_T0000928;gene_id=HG00140_ch_G0000293;Parent=HG00140_ch_T0000928;transcript_name=HG00140_ch_T0000928;gene_name=TSPY5P;ID=exon:HG00140_ch_T0000928:3;Name=TSPY5P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10046775	10046902	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=HG00140_ch_T0000928;gene_id=HG00140_ch_G0000293;Parent=HG00140_ch_T0000928;transcript_name=HG00140_ch_T0000928;gene_name=TSPY5P;ID=intron:HG00140_ch_T0000928:3;Name=TSPY5P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10046903	10046980	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=HG00140_ch_T0000928;gene_id=HG00140_ch_G0000293;Parent=HG00140_ch_T0000928;transcript_name=HG00140_ch_T0000928;gene_name=TSPY5P;ID=exon:HG00140_ch_T0000928:4;Name=TSPY5P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	10046981	10047587	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=HG00140_ch_T0000928;gene_id=HG00140_ch_G0000293;Parent=HG00140_ch_T0000928;transcript_name=HG00140_ch_T0000928;gene_name=TSPY5P;ID=intron:HG00140_ch_T0000928:4;Name=TSPY5P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	10047588	10048094	.	-	.	source_transcript=ENST00000426936.1;source_transcript_name=TSPY5P-201;source_gene=ENSG00000225685.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225685.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000426936.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426936.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY5P;transcript_id=HG00140_ch_T0000928;gene_id=HG00140_ch_G0000293;Parent=HG00140_ch_T0000928;transcript_name=HG00140_ch_T0000928;gene_name=TSPY5P;ID=exon:HG00140_ch_T0000928:5;Name=TSPY5P;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	10049074	10049352	.	+	.	source_gene_common_name=ENSG00000278478;source_gene=ENSG00000278478.1;alternative_source_transcripts=ENST00000430032.3;gene_id=HG00140_ch_G0000294;gene_biotype=processed_pseudogene;gene_name=ENSG00000278478;gene_sources=liftoff;ID=HG00140_ch_G0000294;Name=ENSG00000278478
HG00140_chrY	CAT	transcript	10049074	10049352	1000	+	.	source_transcript=ENST00000430032.3;source_transcript_name=ENST00000430032;source_gene=ENSG00000278478.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000278478.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000430032.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000430032.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278478;alternative_source_transcripts=ENST00000430032.3;transcript_id=HG00140_ch_T0000929;gene_id=HG00140_ch_G0000294;Parent=HG00140_ch_G0000294;transcript_name=HG00140_ch_T0000929;gene_name=ENSG00000278478;ID=HG00140_ch_T0000929;Name=ENSG00000278478
HG00140_chrY	CAT	exon	10049074	10049352	.	+	.	source_transcript=ENST00000430032.3;source_transcript_name=ENST00000430032;source_gene=ENSG00000278478.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000278478.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000430032.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000430032.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278478;alternative_source_transcripts=ENST00000430032.3;transcript_id=HG00140_ch_T0000929;gene_id=HG00140_ch_G0000294;Parent=HG00140_ch_T0000929;transcript_name=HG00140_ch_T0000929;gene_name=ENSG00000278478;ID=exon:HG00140_ch_T0000929:0;Name=ENSG00000278478;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	10069353	10069471	.	-	.	source_gene_common_name=RNA5SP518;source_gene=ENSG00000251766.1;alternative_source_transcripts=ENST00000515957.1;gene_id=HG00140_ch_G0000295;gene_biotype=rRNA_pseudogene;gene_name=RNA5SP518;gene_sources=liftoff;ID=HG00140_ch_G0000295;Name=RNA5SP518
HG00140_chrY	CAT	transcript	10069353	10069471	1000	-	.	source_transcript=ENST00000515957.1;source_transcript_name=RNA5SP518-201;source_gene=ENSG00000251766.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000251766.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000515957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515957.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP518;alternative_source_transcripts=ENST00000515957.1;transcript_id=HG00140_ch_T0000930;gene_id=HG00140_ch_G0000295;Parent=HG00140_ch_G0000295;transcript_name=HG00140_ch_T0000930;gene_name=RNA5SP518;ID=HG00140_ch_T0000930;Name=RNA5SP518
HG00140_chrY	CAT	exon	10069353	10069471	.	-	.	source_transcript=ENST00000515957.1;source_transcript_name=RNA5SP518-201;source_gene=ENSG00000251766.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000251766.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000515957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515957.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP518;alternative_source_transcripts=ENST00000515957.1;transcript_id=HG00140_ch_T0000930;gene_id=HG00140_ch_G0000295;Parent=HG00140_ch_T0000930;transcript_name=HG00140_ch_T0000930;gene_name=RNA5SP518;ID=exon:HG00140_ch_T0000930:0;Name=RNA5SP518;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	10071818	10071936	.	-	.	source_gene_common_name=RNA5SP519;source_gene=ENSG00000252289.1;alternative_source_transcripts=ENST00000516480.1;gene_id=HG00140_ch_G0000296;gene_biotype=rRNA_pseudogene;gene_name=RNA5SP519;gene_sources=liftoff;ID=HG00140_ch_G0000296;Name=RNA5SP519
HG00140_chrY	CAT	transcript	10071818	10071936	1000	-	.	source_transcript=ENST00000516480.1;source_transcript_name=RNA5SP519-201;source_gene=ENSG00000252289.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000252289.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000516480.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516480.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP519;alternative_source_transcripts=ENST00000516480.1;transcript_id=HG00140_ch_T0000931;gene_id=HG00140_ch_G0000296;Parent=HG00140_ch_G0000296;transcript_name=HG00140_ch_T0000931;gene_name=RNA5SP519;ID=HG00140_ch_T0000931;Name=RNA5SP519
HG00140_chrY	CAT	exon	10071818	10071936	.	-	.	source_transcript=ENST00000516480.1;source_transcript_name=RNA5SP519-201;source_gene=ENSG00000252289.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000252289.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000516480.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516480.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP519;alternative_source_transcripts=ENST00000516480.1;transcript_id=HG00140_ch_T0000931;gene_id=HG00140_ch_G0000296;Parent=HG00140_ch_T0000931;transcript_name=HG00140_ch_T0000931;gene_name=RNA5SP519;ID=exon:HG00140_ch_T0000931:0;Name=RNA5SP519;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	10150532	10151667	.	-	.	source_gene_common_name=DUX4L31;source_gene=ENSG00000231411.1;alternative_source_transcripts=ENST00000446466.1;gene_id=HG00140_ch_G0000297;gene_biotype=unprocessed_pseudogene;gene_name=DUX4L31;gene_sources=liftoff;ID=HG00140_ch_G0000297;Name=DUX4L31
HG00140_chrY	CAT	transcript	10150532	10151667	1000	-	.	source_transcript=ENST00000446466.1;source_transcript_name=DUX4L31-201;source_gene=ENSG00000231411.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231411.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000446466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000446466.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DUX4L31;alternative_source_transcripts=ENST00000446466.1;transcript_id=HG00140_ch_T0000932;gene_id=HG00140_ch_G0000297;Parent=HG00140_ch_G0000297;transcript_name=HG00140_ch_T0000932;gene_name=DUX4L31;ID=HG00140_ch_T0000932;Name=DUX4L31
HG00140_chrY	CAT	exon	10150532	10151667	.	-	.	source_transcript=ENST00000446466.1;source_transcript_name=DUX4L31-201;source_gene=ENSG00000231411.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231411.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000446466.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000446466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DUX4L31;alternative_source_transcripts=ENST00000446466.1;transcript_id=HG00140_ch_T0000932;gene_id=HG00140_ch_G0000297;Parent=HG00140_ch_T0000932;transcript_name=HG00140_ch_T0000932;gene_name=DUX4L31;ID=exon:HG00140_ch_T0000932:0;Name=DUX4L31;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	10152795	10153149	.	+	.	source_gene_common_name=PCMTD1P1;source_gene=ENSG00000226061.1;alternative_source_transcripts=ENST00000455560.1;gene_id=HG00140_ch_G0000298;gene_biotype=unprocessed_pseudogene;gene_name=PCMTD1P1;gene_sources=liftoff;ID=HG00140_ch_G0000298;Name=PCMTD1P1
HG00140_chrY	CAT	transcript	10152795	10153149	1000	+	.	source_transcript=ENST00000455560.1;source_transcript_name=PCMTD1P1-201;source_gene=ENSG00000226061.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226061.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455560.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455560.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCMTD1P1;alternative_source_transcripts=ENST00000455560.1;transcript_id=HG00140_ch_T0000933;gene_id=HG00140_ch_G0000298;Parent=HG00140_ch_G0000298;transcript_name=HG00140_ch_T0000933;gene_name=PCMTD1P1;ID=HG00140_ch_T0000933;Name=PCMTD1P1
HG00140_chrY	CAT	exon	10152795	10153149	.	+	.	source_transcript=ENST00000455560.1;source_transcript_name=PCMTD1P1-201;source_gene=ENSG00000226061.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226061.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455560.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455560.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCMTD1P1;alternative_source_transcripts=ENST00000455560.1;transcript_id=HG00140_ch_T0000933;gene_id=HG00140_ch_G0000298;Parent=HG00140_ch_T0000933;transcript_name=HG00140_ch_T0000933;gene_name=PCMTD1P1;ID=exon:HG00140_ch_T0000933:0;Name=PCMTD1P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	10169320	10171241	.	-	.	source_gene_common_name=CDC27P2;source_gene=ENSG00000237447.1;alternative_source_transcripts=ENST00000425026.1;gene_id=HG00140_ch_G0000299;gene_biotype=processed_pseudogene;gene_name=CDC27P2;gene_sources=liftoff;ID=HG00140_ch_G0000299;Name=CDC27P2
HG00140_chrY	CAT	transcript	10169320	10171241	1000	-	.	source_transcript=ENST00000425026.1;source_transcript_name=CDC27P2-201;source_gene=ENSG00000237447.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237447.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425026.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDC27P2;alternative_source_transcripts=ENST00000425026.1;transcript_id=HG00140_ch_T0000934;gene_id=HG00140_ch_G0000299;Parent=HG00140_ch_G0000299;transcript_name=HG00140_ch_T0000934;gene_name=CDC27P2;ID=HG00140_ch_T0000934;Name=CDC27P2
HG00140_chrY	CAT	exon	10169320	10171241	.	-	.	source_transcript=ENST00000425026.1;source_transcript_name=CDC27P2-201;source_gene=ENSG00000237447.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237447.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDC27P2;alternative_source_transcripts=ENST00000425026.1;transcript_id=HG00140_ch_T0000934;gene_id=HG00140_ch_G0000299;Parent=HG00140_ch_T0000934;transcript_name=HG00140_ch_T0000934;gene_name=CDC27P2;ID=exon:HG00140_ch_T0000934:0;Name=CDC27P2;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	10176199	10178046	.	-	.	source_gene_common_name=ENSG00000225840;source_gene=ENSG00000225840.2;alternative_source_transcripts=ENST00000445125.2;gene_id=HG00140_ch_G0000300;gene_biotype=processed_pseudogene;gene_name=ENSG00000225840;gene_sources=liftoff;ID=HG00140_ch_G0000300;Name=ENSG00000225840
HG00140_chrY	CAT	transcript	10176199	10178046	1000	-	.	source_transcript=ENST00000445125.2;source_transcript_name=ENST00000445125;source_gene=ENSG00000225840.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225840.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445125.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445125.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000225840;alternative_source_transcripts=ENST00000445125.2;transcript_id=HG00140_ch_T0000935;gene_id=HG00140_ch_G0000300;Parent=HG00140_ch_G0000300;transcript_name=HG00140_ch_T0000935;gene_name=ENSG00000225840;ID=HG00140_ch_T0000935;Name=ENSG00000225840
HG00140_chrY	CAT	exon	10176199	10178046	.	-	.	source_transcript=ENST00000445125.2;source_transcript_name=ENST00000445125;source_gene=ENSG00000225840.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225840.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445125.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445125.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000225840;alternative_source_transcripts=ENST00000445125.2;transcript_id=HG00140_ch_T0000935;gene_id=HG00140_ch_G0000300;Parent=HG00140_ch_T0000935;transcript_name=HG00140_ch_T0000935;gene_name=ENSG00000225840;ID=exon:HG00140_ch_T0000935:0;Name=ENSG00000225840;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	10179098	10179249	.	+	.	source_gene_common_name=RNA5-8SP6;source_gene=ENSG00000251705.1;alternative_source_transcripts=ENST00000515896.1;gene_id=HG00140_ch_G0000301;gene_biotype=rRNA_pseudogene;gene_name=RNA5-8SP6;gene_sources=liftoff;ID=HG00140_ch_G0000301;Name=RNA5-8SP6
HG00140_chrY	CAT	transcript	10179098	10179249	1000	+	.	source_transcript=ENST00000515896.1;source_transcript_name=RNA5-8SP6-201;source_gene=ENSG00000251705.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000251705.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000515896.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515896.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5-8SP6;alternative_source_transcripts=ENST00000515896.1;transcript_id=HG00140_ch_T0000936;gene_id=HG00140_ch_G0000301;Parent=HG00140_ch_G0000301;transcript_name=HG00140_ch_T0000936;gene_name=RNA5-8SP6;ID=HG00140_ch_T0000936;Name=RNA5-8SP6
HG00140_chrY	CAT	exon	10179098	10179249	.	+	.	source_transcript=ENST00000515896.1;source_transcript_name=RNA5-8SP6-201;source_gene=ENSG00000251705.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000251705.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000515896.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515896.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5-8SP6;alternative_source_transcripts=ENST00000515896.1;transcript_id=HG00140_ch_T0000936;gene_id=HG00140_ch_G0000301;Parent=HG00140_ch_T0000936;transcript_name=HG00140_ch_T0000936;gene_name=RNA5-8SP6;ID=exon:HG00140_ch_T0000936:0;Name=RNA5-8SP6;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	11506158	11506379	.	-	.	source_gene_common_name=ENSG00000273858;source_gene=ENSG00000273858.1;alternative_source_transcripts=ENST00000622087.1,ENST00000622087.1;gene_id=HG00140_ch_G0000302;gene_biotype=processed_pseudogene;gene_name=ENSG00000273858;gene_sources=liftoff;ID=HG00140_ch_G0000302;Name=ENSG00000273858
HG00140_chrY	CAT	transcript	11506158	11506379	1000	-	.	source_transcript=ENST00000622087.1;source_transcript_name=ENST00000622087;source_gene=ENSG00000273858.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000273858.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000622087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000622087.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273858;alternative_source_transcripts=ENST00000622087.1,ENST00000622087.1;transcript_id=HG00140_ch_T0000937;gene_id=HG00140_ch_G0000302;Parent=HG00140_ch_G0000302;transcript_name=HG00140_ch_T0000937;gene_name=ENSG00000273858;ID=HG00140_ch_T0000937;Name=ENSG00000273858
HG00140_chrY	CAT	exon	11506158	11506379	.	-	.	source_transcript=ENST00000622087.1;source_transcript_name=ENST00000622087;source_gene=ENSG00000273858.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000273858.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000622087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000622087.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273858;alternative_source_transcripts=ENST00000622087.1,ENST00000622087.1;transcript_id=HG00140_ch_T0000937;gene_id=HG00140_ch_G0000302;Parent=HG00140_ch_T0000937;transcript_name=HG00140_ch_T0000937;gene_name=ENSG00000273858;ID=exon:HG00140_ch_T0000937:0;Name=ENSG00000273858;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	11549314	11549899	.	-	.	source_gene_common_name=CDRT15P10;source_gene=ENSG00000273693.1;alternative_source_transcripts=ENST00000618128.1,ENST00000618128.1;gene_id=HG00140_ch_G0000303;gene_biotype=processed_pseudogene;gene_name=CDRT15P10;gene_sources=liftoff;ID=HG00140_ch_G0000303;Name=CDRT15P10
HG00140_chrY	CAT	transcript	11549314	11549899	1000	-	.	source_transcript=ENST00000618128.1;source_transcript_name=CDRT15P10-201;source_gene=ENSG00000273693.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000273693.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000618128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618128.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDRT15P10;alternative_source_transcripts=ENST00000618128.1,ENST00000618128.1;transcript_id=HG00140_ch_T0000938;gene_id=HG00140_ch_G0000303;Parent=HG00140_ch_G0000303;transcript_name=HG00140_ch_T0000938;gene_name=CDRT15P10;ID=HG00140_ch_T0000938;Name=CDRT15P10
HG00140_chrY	CAT	exon	11549314	11549899	.	-	.	source_transcript=ENST00000618128.1;source_transcript_name=CDRT15P10-201;source_gene=ENSG00000273693.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000273693.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000618128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618128.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDRT15P10;alternative_source_transcripts=ENST00000618128.1,ENST00000618128.1;transcript_id=HG00140_ch_T0000938;gene_id=HG00140_ch_G0000303;Parent=HG00140_ch_T0000938;transcript_name=HG00140_ch_T0000938;gene_name=CDRT15P10;ID=exon:HG00140_ch_T0000938:0;Name=CDRT15P10;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	11570903	11571101	.	-	.	source_gene_common_name=ENSG00000271365;source_gene=ENSG00000271365.1;alternative_source_transcripts=ENST00000605663.1,ENST00000605663.1;gene_id=HG00140_ch_G0000304;gene_biotype=processed_pseudogene;gene_name=ENSG00000271365;gene_sources=liftoff;ID=HG00140_ch_G0000304;Name=ENSG00000271365
HG00140_chrY	CAT	transcript	11570903	11571101	1000	-	.	source_transcript=ENST00000605663.1;source_transcript_name=ENST00000605663;source_gene=ENSG00000271365.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271365.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000605663.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000605663.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000271365;alternative_source_transcripts=ENST00000605663.1,ENST00000605663.1;transcript_id=HG00140_ch_T0000939;gene_id=HG00140_ch_G0000304;Parent=HG00140_ch_G0000304;transcript_name=HG00140_ch_T0000939;gene_name=ENSG00000271365;ID=HG00140_ch_T0000939;Name=ENSG00000271365
HG00140_chrY	CAT	exon	11570903	11571101	.	-	.	source_transcript=ENST00000605663.1;source_transcript_name=ENST00000605663;source_gene=ENSG00000271365.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271365.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000605663.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000605663.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000271365;alternative_source_transcripts=ENST00000605663.1,ENST00000605663.1;transcript_id=HG00140_ch_T0000939;gene_id=HG00140_ch_G0000304;Parent=HG00140_ch_T0000939;transcript_name=HG00140_ch_T0000939;gene_name=ENSG00000271365;ID=exon:HG00140_ch_T0000939:0;Name=ENSG00000271365;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	11571227	11571434	.	-	.	source_gene_common_name=ENSG00000271309;source_gene=ENSG00000271309.1;alternative_source_transcripts=ENST00000604370.1,ENST00000604370.1;gene_id=HG00140_ch_G0000305;gene_biotype=processed_pseudogene;gene_name=ENSG00000271309;gene_sources=liftoff;ID=HG00140_ch_G0000305;Name=ENSG00000271309
HG00140_chrY	CAT	transcript	11571227	11571434	1000	-	.	source_transcript=ENST00000604370.1;source_transcript_name=ENST00000604370;source_gene=ENSG00000271309.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271309.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604370.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604370.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000271309;alternative_source_transcripts=ENST00000604370.1,ENST00000604370.1;transcript_id=HG00140_ch_T0000940;gene_id=HG00140_ch_G0000305;Parent=HG00140_ch_G0000305;transcript_name=HG00140_ch_T0000940;gene_name=ENSG00000271309;ID=HG00140_ch_T0000940;Name=ENSG00000271309
HG00140_chrY	CAT	exon	11571227	11571434	.	-	.	source_transcript=ENST00000604370.1;source_transcript_name=ENST00000604370;source_gene=ENSG00000271309.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271309.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604370.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604370.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000271309;alternative_source_transcripts=ENST00000604370.1,ENST00000604370.1;transcript_id=HG00140_ch_T0000940;gene_id=HG00140_ch_G0000305;Parent=HG00140_ch_T0000940;transcript_name=HG00140_ch_T0000940;gene_name=ENSG00000271309;ID=exon:HG00140_ch_T0000940:0;Name=ENSG00000271309;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	11571557	11571725	.	-	.	source_gene_common_name=ENSG00000270570;source_gene=ENSG00000270570.1;alternative_source_transcripts=ENST00000603467.1,ENST00000603467.1;gene_id=HG00140_ch_G0000306;gene_biotype=processed_pseudogene;gene_name=ENSG00000270570;gene_sources=liftoff;ID=HG00140_ch_G0000306;Name=ENSG00000270570
HG00140_chrY	CAT	transcript	11571557	11571725	1000	-	.	source_transcript=ENST00000603467.1;source_transcript_name=ENST00000603467;source_gene=ENSG00000270570.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270570.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000603467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000603467.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000270570;alternative_source_transcripts=ENST00000603467.1,ENST00000603467.1;transcript_id=HG00140_ch_T0000941;gene_id=HG00140_ch_G0000306;Parent=HG00140_ch_G0000306;transcript_name=HG00140_ch_T0000941;gene_name=ENSG00000270570;ID=HG00140_ch_T0000941;Name=ENSG00000270570
HG00140_chrY	CAT	exon	11571557	11571725	.	-	.	source_transcript=ENST00000603467.1;source_transcript_name=ENST00000603467;source_gene=ENSG00000270570.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270570.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000603467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000603467.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000270570;alternative_source_transcripts=ENST00000603467.1,ENST00000603467.1;transcript_id=HG00140_ch_T0000941;gene_id=HG00140_ch_G0000306;Parent=HG00140_ch_T0000941;transcript_name=HG00140_ch_T0000941;gene_name=ENSG00000270570;ID=exon:HG00140_ch_T0000941:0;Name=ENSG00000270570;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	11580124	11678841	.	-	.	source_gene_common_name=ENSG00000291032;source_gene=ENSG00000291032.2;gene_id=HG00140_ch_G0000307;gene_biotype=lncRNA;gene_name=ENSG00000291032;gene_sources=liftoff;ID=HG00140_ch_G0000307;Name=ENSG00000291032
HG00140_chrY	CAT	transcript	11580124	11678840	1000	-	.	source_transcript=ENST00000796783.1;source_transcript_name=ENST00000796783;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796783.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000942;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_G0000307;transcript_name=HG00140_ch_T0000942;gene_name=ENSG00000291032;ID=HG00140_ch_T0000942;Name=ENSG00000291032
HG00140_chrY	CAT	exon	11580124	11580273	.	-	.	source_transcript=ENST00000796783.1;source_transcript_name=ENST00000796783;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000942;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000942;transcript_name=HG00140_ch_T0000942;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000942:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11580274	11607149	.	-	.	source_transcript=ENST00000796783.1;source_transcript_name=ENST00000796783;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000942;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000942;transcript_name=HG00140_ch_T0000942;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000942:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11607150	11607184	.	-	.	source_transcript=ENST00000796783.1;source_transcript_name=ENST00000796783;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000942;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000942;transcript_name=HG00140_ch_T0000942;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000942:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11607185	11676560	.	-	.	source_transcript=ENST00000796783.1;source_transcript_name=ENST00000796783;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000942;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000942;transcript_name=HG00140_ch_T0000942;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000942:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11676561	11676619	.	-	.	source_transcript=ENST00000796783.1;source_transcript_name=ENST00000796783;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000942;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000942;transcript_name=HG00140_ch_T0000942;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000942:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11676620	11678754	.	-	.	source_transcript=ENST00000796783.1;source_transcript_name=ENST00000796783;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000942;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000942;transcript_name=HG00140_ch_T0000942;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000942:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11678755	11678840	.	-	.	source_transcript=ENST00000796783.1;source_transcript_name=ENST00000796783;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796783.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796783.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000942;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000942;transcript_name=HG00140_ch_T0000942;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000942:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	11588034	11678844	1000	-	.	source_transcript=ENST00000796784.1;source_transcript_name=ENST00000796784;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796784.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000943;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_G0000307;transcript_name=HG00140_ch_T0000943;gene_name=ENSG00000291032;ID=HG00140_ch_T0000943;Name=ENSG00000291032
HG00140_chrY	CAT	exon	11588034	11588157	.	-	.	source_transcript=ENST00000796784.1;source_transcript_name=ENST00000796784;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000943;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000943;transcript_name=HG00140_ch_T0000943;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000943:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11588158	11676560	.	-	.	source_transcript=ENST00000796784.1;source_transcript_name=ENST00000796784;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000943;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000943;transcript_name=HG00140_ch_T0000943;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000943:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11676561	11676619	.	-	.	source_transcript=ENST00000796784.1;source_transcript_name=ENST00000796784;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000943;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000943;transcript_name=HG00140_ch_T0000943;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000943:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11676620	11678754	.	-	.	source_transcript=ENST00000796784.1;source_transcript_name=ENST00000796784;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000943;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000943;transcript_name=HG00140_ch_T0000943;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000943:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11678755	11678844	.	-	.	source_transcript=ENST00000796784.1;source_transcript_name=ENST00000796784;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796784.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000943;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000943;transcript_name=HG00140_ch_T0000943;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000943:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	11590956	11678840	1000	-	.	source_transcript=ENST00000796785.1;source_transcript_name=ENST00000796785;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796785.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000944;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_G0000307;transcript_name=HG00140_ch_T0000944;gene_name=ENSG00000291032;ID=HG00140_ch_T0000944;Name=ENSG00000291032
HG00140_chrY	CAT	exon	11590956	11591214	.	-	.	source_transcript=ENST00000796785.1;source_transcript_name=ENST00000796785;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000944;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000944;transcript_name=HG00140_ch_T0000944;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000944:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11591215	11676560	.	-	.	source_transcript=ENST00000796785.1;source_transcript_name=ENST00000796785;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000944;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000944;transcript_name=HG00140_ch_T0000944;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000944:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11676561	11676619	.	-	.	source_transcript=ENST00000796785.1;source_transcript_name=ENST00000796785;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000944;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000944;transcript_name=HG00140_ch_T0000944;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000944:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11676620	11678754	.	-	.	source_transcript=ENST00000796785.1;source_transcript_name=ENST00000796785;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000944;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000944;transcript_name=HG00140_ch_T0000944;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000944:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11678755	11678840	.	-	.	source_transcript=ENST00000796785.1;source_transcript_name=ENST00000796785;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796785.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000944;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000944;transcript_name=HG00140_ch_T0000944;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000944:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	11590961	11676619	1000	-	.	source_transcript=ENST00000796786.1;source_transcript_name=ENST00000796786;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796786.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000945;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_G0000307;transcript_name=HG00140_ch_T0000945;gene_name=ENSG00000291032;ID=HG00140_ch_T0000945;Name=ENSG00000291032
HG00140_chrY	CAT	exon	11590961	11591214	.	-	.	source_transcript=ENST00000796786.1;source_transcript_name=ENST00000796786;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000945;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000945;transcript_name=HG00140_ch_T0000945;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000945:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11591215	11607149	.	-	.	source_transcript=ENST00000796786.1;source_transcript_name=ENST00000796786;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000945;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000945;transcript_name=HG00140_ch_T0000945;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000945:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11607150	11607184	.	-	.	source_transcript=ENST00000796786.1;source_transcript_name=ENST00000796786;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000945;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000945;transcript_name=HG00140_ch_T0000945;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000945:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11607185	11676560	.	-	.	source_transcript=ENST00000796786.1;source_transcript_name=ENST00000796786;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000945;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000945;transcript_name=HG00140_ch_T0000945;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000945:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11676561	11676619	.	-	.	source_transcript=ENST00000796786.1;source_transcript_name=ENST00000796786;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796786.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796786.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000945;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000945;transcript_name=HG00140_ch_T0000945;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000945:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	11617608	11678843	1000	-	.	source_transcript=ENST00000652671.3;source_transcript_name=ENST00000652671;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652671.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000652671.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000947;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_G0000307;transcript_name=HG00140_ch_T0000947;gene_name=ENSG00000291032;ID=HG00140_ch_T0000947;Name=ENSG00000291032
HG00140_chrY	CAT	exon	11617608	11617916	.	-	.	source_transcript=ENST00000652671.3;source_transcript_name=ENST00000652671;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652671.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000652671.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000947;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000947;transcript_name=HG00140_ch_T0000947;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000947:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11617917	11619469	.	-	.	source_transcript=ENST00000652671.3;source_transcript_name=ENST00000652671;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652671.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000652671.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000947;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000947;transcript_name=HG00140_ch_T0000947;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000947:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11619470	11619700	.	-	.	source_transcript=ENST00000652671.3;source_transcript_name=ENST00000652671;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652671.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000652671.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000947;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000947;transcript_name=HG00140_ch_T0000947;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000947:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11619701	11676560	.	-	.	source_transcript=ENST00000652671.3;source_transcript_name=ENST00000652671;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652671.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000652671.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000947;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000947;transcript_name=HG00140_ch_T0000947;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000947:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11676561	11676619	.	-	.	source_transcript=ENST00000652671.3;source_transcript_name=ENST00000652671;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652671.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000652671.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000947;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000947;transcript_name=HG00140_ch_T0000947;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000947:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11676620	11678754	.	-	.	source_transcript=ENST00000652671.3;source_transcript_name=ENST00000652671;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652671.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000652671.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000947;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000947;transcript_name=HG00140_ch_T0000947;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000947:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11678755	11678843	.	-	.	source_transcript=ENST00000652671.3;source_transcript_name=ENST00000652671;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652671.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000652671.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000947;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000947;transcript_name=HG00140_ch_T0000947;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000947:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	11617608	11678840	1000	-	.	source_transcript=ENST00000796787.1;source_transcript_name=ENST00000796787;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796787.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000948;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_G0000307;transcript_name=HG00140_ch_T0000948;gene_name=ENSG00000291032;ID=HG00140_ch_T0000948;Name=ENSG00000291032
HG00140_chrY	CAT	exon	11617608	11617886	.	-	.	source_transcript=ENST00000796787.1;source_transcript_name=ENST00000796787;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000948;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000948;transcript_name=HG00140_ch_T0000948;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000948:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11617887	11618410	.	-	.	source_transcript=ENST00000796787.1;source_transcript_name=ENST00000796787;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000948;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000948;transcript_name=HG00140_ch_T0000948;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000948:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11618411	11618431	.	-	.	source_transcript=ENST00000796787.1;source_transcript_name=ENST00000796787;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000948;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000948;transcript_name=HG00140_ch_T0000948;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000948:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11618432	11619469	.	-	.	source_transcript=ENST00000796787.1;source_transcript_name=ENST00000796787;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000948;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000948;transcript_name=HG00140_ch_T0000948;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000948:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11619470	11619700	.	-	.	source_transcript=ENST00000796787.1;source_transcript_name=ENST00000796787;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000948;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000948;transcript_name=HG00140_ch_T0000948;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000948:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11619701	11676560	.	-	.	source_transcript=ENST00000796787.1;source_transcript_name=ENST00000796787;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000948;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000948;transcript_name=HG00140_ch_T0000948;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000948:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11676561	11676619	.	-	.	source_transcript=ENST00000796787.1;source_transcript_name=ENST00000796787;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000948;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000948;transcript_name=HG00140_ch_T0000948;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000948:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11676620	11678754	.	-	.	source_transcript=ENST00000796787.1;source_transcript_name=ENST00000796787;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000948;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000948;transcript_name=HG00140_ch_T0000948;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000948:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11678755	11678840	.	-	.	source_transcript=ENST00000796787.1;source_transcript_name=ENST00000796787;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796787.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796787.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000948;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000948;transcript_name=HG00140_ch_T0000948;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000948:4;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	11617613	11678793	1000	-	.	source_transcript=ENST00000796791.1;source_transcript_name=ENST00000796791;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796791.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000949;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_G0000307;transcript_name=HG00140_ch_T0000949;gene_name=ENSG00000291032;ID=HG00140_ch_T0000949;Name=ENSG00000291032
HG00140_chrY	CAT	exon	11617613	11617916	.	-	.	source_transcript=ENST00000796791.1;source_transcript_name=ENST00000796791;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000949;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000949;transcript_name=HG00140_ch_T0000949;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000949:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11617917	11676560	.	-	.	source_transcript=ENST00000796791.1;source_transcript_name=ENST00000796791;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000949;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000949;transcript_name=HG00140_ch_T0000949;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000949:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11676561	11676619	.	-	.	source_transcript=ENST00000796791.1;source_transcript_name=ENST00000796791;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000949;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000949;transcript_name=HG00140_ch_T0000949;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000949:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11676620	11678754	.	-	.	source_transcript=ENST00000796791.1;source_transcript_name=ENST00000796791;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000949;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000949;transcript_name=HG00140_ch_T0000949;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000949:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11678755	11678793	.	-	.	source_transcript=ENST00000796791.1;source_transcript_name=ENST00000796791;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796791.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796791.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000949;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000949;transcript_name=HG00140_ch_T0000949;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000949:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	11617613	11678816	1000	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000950;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_G0000307;transcript_name=HG00140_ch_T0000950;gene_name=ENSG00000291032;ID=HG00140_ch_T0000950;Name=ENSG00000291032
HG00140_chrY	CAT	exon	11617613	11617916	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000950;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000950;transcript_name=HG00140_ch_T0000950;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000950:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11617917	11618410	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000950;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000950;transcript_name=HG00140_ch_T0000950;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000950:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11618411	11618598	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000950;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000950;transcript_name=HG00140_ch_T0000950;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000950:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11618599	11618701	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000950;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000950;transcript_name=HG00140_ch_T0000950;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000950:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11618702	11618979	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000950;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000950;transcript_name=HG00140_ch_T0000950;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000950:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11618980	11619469	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000950;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000950;transcript_name=HG00140_ch_T0000950;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000950:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11619470	11619700	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000950;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000950;transcript_name=HG00140_ch_T0000950;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000950:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11619701	11676560	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000950;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000950;transcript_name=HG00140_ch_T0000950;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000950:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11676561	11676619	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000950;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000950;transcript_name=HG00140_ch_T0000950;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000950:4;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11676620	11678754	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000950;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000950;transcript_name=HG00140_ch_T0000950;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000950:4;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11678755	11678816	.	-	.	source_transcript=ENST00000796790.1;source_transcript_name=ENST00000796790;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796790.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796790.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000950;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000950;transcript_name=HG00140_ch_T0000950;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000950:5;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	11617613	11678835	1000	-	.	source_transcript=ENST00000796788.1;source_transcript_name=ENST00000796788;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796788.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000951;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_G0000307;transcript_name=HG00140_ch_T0000951;gene_name=ENSG00000291032;ID=HG00140_ch_T0000951;Name=ENSG00000291032
HG00140_chrY	CAT	exon	11617613	11617886	.	-	.	source_transcript=ENST00000796788.1;source_transcript_name=ENST00000796788;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000951;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000951;transcript_name=HG00140_ch_T0000951;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000951:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11617887	11619469	.	-	.	source_transcript=ENST00000796788.1;source_transcript_name=ENST00000796788;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000951;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000951;transcript_name=HG00140_ch_T0000951;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000951:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11619470	11619700	.	-	.	source_transcript=ENST00000796788.1;source_transcript_name=ENST00000796788;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000951;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000951;transcript_name=HG00140_ch_T0000951;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000951:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11619701	11676560	.	-	.	source_transcript=ENST00000796788.1;source_transcript_name=ENST00000796788;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000951;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000951;transcript_name=HG00140_ch_T0000951;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000951:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11676561	11676619	.	-	.	source_transcript=ENST00000796788.1;source_transcript_name=ENST00000796788;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000951;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000951;transcript_name=HG00140_ch_T0000951;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000951:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11676620	11678754	.	-	.	source_transcript=ENST00000796788.1;source_transcript_name=ENST00000796788;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000951;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000951;transcript_name=HG00140_ch_T0000951;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000951:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11678755	11678835	.	-	.	source_transcript=ENST00000796788.1;source_transcript_name=ENST00000796788;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796788.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796788.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000951;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000951;transcript_name=HG00140_ch_T0000951;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000951:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	11617616	11678793	1000	-	.	source_transcript=ENST00000796792.1;source_transcript_name=ENST00000796792;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796792.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000952;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_G0000307;transcript_name=HG00140_ch_T0000952;gene_name=ENSG00000291032;ID=HG00140_ch_T0000952;Name=ENSG00000291032
HG00140_chrY	CAT	exon	11617616	11618598	.	-	.	source_transcript=ENST00000796792.1;source_transcript_name=ENST00000796792;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000952;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000952;transcript_name=HG00140_ch_T0000952;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000952:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11618599	11619469	.	-	.	source_transcript=ENST00000796792.1;source_transcript_name=ENST00000796792;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000952;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000952;transcript_name=HG00140_ch_T0000952;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000952:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11619470	11619700	.	-	.	source_transcript=ENST00000796792.1;source_transcript_name=ENST00000796792;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000952;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000952;transcript_name=HG00140_ch_T0000952;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000952:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11619701	11676560	.	-	.	source_transcript=ENST00000796792.1;source_transcript_name=ENST00000796792;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000952;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000952;transcript_name=HG00140_ch_T0000952;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000952:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11676561	11676619	.	-	.	source_transcript=ENST00000796792.1;source_transcript_name=ENST00000796792;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000952;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000952;transcript_name=HG00140_ch_T0000952;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000952:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11676620	11678754	.	-	.	source_transcript=ENST00000796792.1;source_transcript_name=ENST00000796792;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000952;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000952;transcript_name=HG00140_ch_T0000952;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000952:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11678755	11678793	.	-	.	source_transcript=ENST00000796792.1;source_transcript_name=ENST00000796792;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796792.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796792.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000952;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000952;transcript_name=HG00140_ch_T0000952;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000952:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	11617617	11678835	1000	-	.	source_transcript=ENST00000796789.1;source_transcript_name=ENST00000796789;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796789.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000953;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_G0000307;transcript_name=HG00140_ch_T0000953;gene_name=ENSG00000291032;ID=HG00140_ch_T0000953;Name=ENSG00000291032
HG00140_chrY	CAT	exon	11617617	11617916	.	-	.	source_transcript=ENST00000796789.1;source_transcript_name=ENST00000796789;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000953;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000953;transcript_name=HG00140_ch_T0000953;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000953:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11617917	11618701	.	-	.	source_transcript=ENST00000796789.1;source_transcript_name=ENST00000796789;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000953;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000953;transcript_name=HG00140_ch_T0000953;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000953:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11618702	11618856	.	-	.	source_transcript=ENST00000796789.1;source_transcript_name=ENST00000796789;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000953;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000953;transcript_name=HG00140_ch_T0000953;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000953:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11618857	11619469	.	-	.	source_transcript=ENST00000796789.1;source_transcript_name=ENST00000796789;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000953;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000953;transcript_name=HG00140_ch_T0000953;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000953:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11619470	11619700	.	-	.	source_transcript=ENST00000796789.1;source_transcript_name=ENST00000796789;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000953;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000953;transcript_name=HG00140_ch_T0000953;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000953:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11619701	11676560	.	-	.	source_transcript=ENST00000796789.1;source_transcript_name=ENST00000796789;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000953;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000953;transcript_name=HG00140_ch_T0000953;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000953:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11676561	11676619	.	-	.	source_transcript=ENST00000796789.1;source_transcript_name=ENST00000796789;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000953;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000953;transcript_name=HG00140_ch_T0000953;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000953:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11676620	11678754	.	-	.	source_transcript=ENST00000796789.1;source_transcript_name=ENST00000796789;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000953;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000953;transcript_name=HG00140_ch_T0000953;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000953:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11678755	11678835	.	-	.	source_transcript=ENST00000796789.1;source_transcript_name=ENST00000796789;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796789.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000953;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000953;transcript_name=HG00140_ch_T0000953;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000953:4;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	11619305	11678822	1000	-	.	source_transcript=ENST00000796793.1;source_transcript_name=ENST00000796793;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796793.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000955;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_G0000307;transcript_name=HG00140_ch_T0000955;gene_name=ENSG00000291032;ID=HG00140_ch_T0000955;Name=ENSG00000291032
HG00140_chrY	CAT	exon	11619305	11619700	.	-	.	source_transcript=ENST00000796793.1;source_transcript_name=ENST00000796793;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000955;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000955;transcript_name=HG00140_ch_T0000955;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000955:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11619701	11676560	.	-	.	source_transcript=ENST00000796793.1;source_transcript_name=ENST00000796793;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000955;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000955;transcript_name=HG00140_ch_T0000955;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000955:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11676561	11676619	.	-	.	source_transcript=ENST00000796793.1;source_transcript_name=ENST00000796793;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000955;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000955;transcript_name=HG00140_ch_T0000955;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000955:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11676620	11678754	.	-	.	source_transcript=ENST00000796793.1;source_transcript_name=ENST00000796793;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000955;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000955;transcript_name=HG00140_ch_T0000955;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000955:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11678755	11678822	.	-	.	source_transcript=ENST00000796793.1;source_transcript_name=ENST00000796793;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796793.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796793.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000955;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000955;transcript_name=HG00140_ch_T0000955;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000955:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	11625458	11678938	1000	-	.	source_transcript=ENST00000651211.3;source_transcript_name=ENST00000651211;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651211.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000651211.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000956;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_G0000307;transcript_name=HG00140_ch_T0000956;gene_name=ENSG00000291032;ID=HG00140_ch_T0000956;Name=ENSG00000291032
HG00140_chrY	CAT	exon	11625458	11626953	.	-	.	source_transcript=ENST00000651211.3;source_transcript_name=ENST00000651211;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651211.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000651211.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000956;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000956;transcript_name=HG00140_ch_T0000956;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000956:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11626954	11676560	.	-	.	source_transcript=ENST00000651211.3;source_transcript_name=ENST00000651211;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651211.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000651211.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000956;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000956;transcript_name=HG00140_ch_T0000956;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000956:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11676561	11676619	.	-	.	source_transcript=ENST00000651211.3;source_transcript_name=ENST00000651211;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651211.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000651211.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000956;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000956;transcript_name=HG00140_ch_T0000956;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000956:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11676620	11678754	.	-	.	source_transcript=ENST00000651211.3;source_transcript_name=ENST00000651211;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651211.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000651211.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000956;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000956;transcript_name=HG00140_ch_T0000956;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000956:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11678755	11678938	.	-	.	source_transcript=ENST00000651211.3;source_transcript_name=ENST00000651211;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651211.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000651211.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000956;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000956;transcript_name=HG00140_ch_T0000956;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000956:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	11625465	11679024	1000	-	.	source_transcript=ENST00000796794.1;source_transcript_name=ENST00000796794;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796794.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000957;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_G0000307;transcript_name=HG00140_ch_T0000957;gene_name=ENSG00000291032;ID=HG00140_ch_T0000957;Name=ENSG00000291032
HG00140_chrY	CAT	exon	11625465	11626942	.	-	.	source_transcript=ENST00000796794.1;source_transcript_name=ENST00000796794;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000957;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000957;transcript_name=HG00140_ch_T0000957;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000957:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11626943	11676560	.	-	.	source_transcript=ENST00000796794.1;source_transcript_name=ENST00000796794;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000957;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000957;transcript_name=HG00140_ch_T0000957;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000957:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11676561	11676619	.	-	.	source_transcript=ENST00000796794.1;source_transcript_name=ENST00000796794;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000957;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000957;transcript_name=HG00140_ch_T0000957;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000957:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11676620	11678754	.	-	.	source_transcript=ENST00000796794.1;source_transcript_name=ENST00000796794;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000957;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000957;transcript_name=HG00140_ch_T0000957;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000957:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11678755	11679024	.	-	.	source_transcript=ENST00000796794.1;source_transcript_name=ENST00000796794;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796794.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000957;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000957;transcript_name=HG00140_ch_T0000957;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000957:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	11625563	11678856	1000	-	.	source_transcript=ENST00000796795.1;source_transcript_name=ENST00000796795;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796795.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000958;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_G0000307;transcript_name=HG00140_ch_T0000958;gene_name=ENSG00000291032;ID=HG00140_ch_T0000958;Name=ENSG00000291032
HG00140_chrY	CAT	exon	11625563	11626355	.	-	.	source_transcript=ENST00000796795.1;source_transcript_name=ENST00000796795;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000958;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000958;transcript_name=HG00140_ch_T0000958;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000958:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11626356	11626724	.	-	.	source_transcript=ENST00000796795.1;source_transcript_name=ENST00000796795;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000958;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000958;transcript_name=HG00140_ch_T0000958;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000958:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11626725	11626953	.	-	.	source_transcript=ENST00000796795.1;source_transcript_name=ENST00000796795;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000958;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000958;transcript_name=HG00140_ch_T0000958;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000958:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11626954	11676560	.	-	.	source_transcript=ENST00000796795.1;source_transcript_name=ENST00000796795;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000958;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000958;transcript_name=HG00140_ch_T0000958;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000958:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11676561	11676619	.	-	.	source_transcript=ENST00000796795.1;source_transcript_name=ENST00000796795;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000958;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000958;transcript_name=HG00140_ch_T0000958;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000958:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11676620	11678754	.	-	.	source_transcript=ENST00000796795.1;source_transcript_name=ENST00000796795;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000958;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000958;transcript_name=HG00140_ch_T0000958;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000958:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11678755	11678856	.	-	.	source_transcript=ENST00000796795.1;source_transcript_name=ENST00000796795;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796795.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796795.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000958;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000958;transcript_name=HG00140_ch_T0000958;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000958:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	11625661	11678835	1000	-	.	source_transcript=ENST00000796798.1;source_transcript_name=ENST00000796798;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796798.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000959;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_G0000307;transcript_name=HG00140_ch_T0000959;gene_name=ENSG00000291032;ID=HG00140_ch_T0000959;Name=ENSG00000291032
HG00140_chrY	CAT	exon	11625661	11626953	.	-	.	source_transcript=ENST00000796798.1;source_transcript_name=ENST00000796798;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796798.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000959;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000959;transcript_name=HG00140_ch_T0000959;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000959:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11626954	11676560	.	-	.	source_transcript=ENST00000796798.1;source_transcript_name=ENST00000796798;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796798.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000959;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000959;transcript_name=HG00140_ch_T0000959;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000959:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11676561	11676619	.	-	.	source_transcript=ENST00000796798.1;source_transcript_name=ENST00000796798;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796798.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000959;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000959;transcript_name=HG00140_ch_T0000959;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000959:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11676620	11677893	.	-	.	source_transcript=ENST00000796798.1;source_transcript_name=ENST00000796798;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796798.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000959;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000959;transcript_name=HG00140_ch_T0000959;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000959:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11677894	11677981	.	-	.	source_transcript=ENST00000796798.1;source_transcript_name=ENST00000796798;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796798.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000959;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000959;transcript_name=HG00140_ch_T0000959;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000959:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11677982	11678754	.	-	.	source_transcript=ENST00000796798.1;source_transcript_name=ENST00000796798;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796798.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000959;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000959;transcript_name=HG00140_ch_T0000959;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000959:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11678755	11678835	.	-	.	source_transcript=ENST00000796798.1;source_transcript_name=ENST00000796798;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796798.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796798.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000959;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000959;transcript_name=HG00140_ch_T0000959;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000959:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	11625661	11678841	1000	-	.	source_transcript=ENST00000796796.1;source_transcript_name=ENST00000796796;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796796.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000960;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_G0000307;transcript_name=HG00140_ch_T0000960;gene_name=ENSG00000291032;ID=HG00140_ch_T0000960;Name=ENSG00000291032
HG00140_chrY	CAT	exon	11625661	11626953	.	-	.	source_transcript=ENST00000796796.1;source_transcript_name=ENST00000796796;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796796.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000960;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000960;transcript_name=HG00140_ch_T0000960;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000960:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11626954	11676560	.	-	.	source_transcript=ENST00000796796.1;source_transcript_name=ENST00000796796;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796796.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000960;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000960;transcript_name=HG00140_ch_T0000960;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000960:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11676561	11676619	.	-	.	source_transcript=ENST00000796796.1;source_transcript_name=ENST00000796796;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796796.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000960;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000960;transcript_name=HG00140_ch_T0000960;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000960:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11676620	11678758	.	-	.	source_transcript=ENST00000796796.1;source_transcript_name=ENST00000796796;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796796.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000960;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000960;transcript_name=HG00140_ch_T0000960;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000960:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11678759	11678841	.	-	.	source_transcript=ENST00000796796.1;source_transcript_name=ENST00000796796;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796796.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796796.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000960;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000960;transcript_name=HG00140_ch_T0000960;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000960:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	11625661	11678622	1000	-	.	source_transcript=ENST00000796800.1;source_transcript_name=ENST00000796800;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796800.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000961;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_G0000307;transcript_name=HG00140_ch_T0000961;gene_name=ENSG00000291032;ID=HG00140_ch_T0000961;Name=ENSG00000291032
HG00140_chrY	CAT	exon	11625661	11626953	.	-	.	source_transcript=ENST00000796800.1;source_transcript_name=ENST00000796800;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796800.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000961;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000961;transcript_name=HG00140_ch_T0000961;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000961:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11626954	11676560	.	-	.	source_transcript=ENST00000796800.1;source_transcript_name=ENST00000796800;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796800.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000961;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000961;transcript_name=HG00140_ch_T0000961;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000961:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11676561	11676619	.	-	.	source_transcript=ENST00000796800.1;source_transcript_name=ENST00000796800;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796800.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000961;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000961;transcript_name=HG00140_ch_T0000961;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000961:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11676620	11678031	.	-	.	source_transcript=ENST00000796800.1;source_transcript_name=ENST00000796800;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796800.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000961;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000961;transcript_name=HG00140_ch_T0000961;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000961:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11678032	11678622	.	-	.	source_transcript=ENST00000796800.1;source_transcript_name=ENST00000796800;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796800.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796800.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000961;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000961;transcript_name=HG00140_ch_T0000961;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000961:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	11625661	11678804	1000	-	.	source_transcript=ENST00000796799.1;source_transcript_name=ENST00000796799;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796799.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000962;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_G0000307;transcript_name=HG00140_ch_T0000962;gene_name=ENSG00000291032;ID=HG00140_ch_T0000962;Name=ENSG00000291032
HG00140_chrY	CAT	exon	11625661	11626942	.	-	.	source_transcript=ENST00000796799.1;source_transcript_name=ENST00000796799;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000962;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000962;transcript_name=HG00140_ch_T0000962;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000962:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11626943	11676560	.	-	.	source_transcript=ENST00000796799.1;source_transcript_name=ENST00000796799;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000962;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000962;transcript_name=HG00140_ch_T0000962;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000962:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11676561	11676619	.	-	.	source_transcript=ENST00000796799.1;source_transcript_name=ENST00000796799;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000962;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000962;transcript_name=HG00140_ch_T0000962;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000962:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11676620	11678162	.	-	.	source_transcript=ENST00000796799.1;source_transcript_name=ENST00000796799;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000962;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000962;transcript_name=HG00140_ch_T0000962;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000962:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11678163	11678272	.	-	.	source_transcript=ENST00000796799.1;source_transcript_name=ENST00000796799;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000962;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000962;transcript_name=HG00140_ch_T0000962;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000962:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11678273	11678754	.	-	.	source_transcript=ENST00000796799.1;source_transcript_name=ENST00000796799;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000962;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000962;transcript_name=HG00140_ch_T0000962;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000962:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11678755	11678804	.	-	.	source_transcript=ENST00000796799.1;source_transcript_name=ENST00000796799;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796799.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796799.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000962;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000962;transcript_name=HG00140_ch_T0000962;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000962:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	11625661	11678768	1000	-	.	source_transcript=ENST00000687423.1;source_transcript_name=ENST00000687423;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000687423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000687423.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000963;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_G0000307;transcript_name=HG00140_ch_T0000963;gene_name=ENSG00000291032;ID=HG00140_ch_T0000963;Name=ENSG00000291032
HG00140_chrY	CAT	exon	11625661	11626953	.	-	.	source_transcript=ENST00000687423.1;source_transcript_name=ENST00000687423;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000687423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000687423.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000963;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000963;transcript_name=HG00140_ch_T0000963;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000963:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11626954	11676560	.	-	.	source_transcript=ENST00000687423.1;source_transcript_name=ENST00000687423;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000687423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000687423.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000963;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000963;transcript_name=HG00140_ch_T0000963;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000963:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11676561	11676619	.	-	.	source_transcript=ENST00000687423.1;source_transcript_name=ENST00000687423;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000687423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000687423.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000963;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000963;transcript_name=HG00140_ch_T0000963;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000963:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11676620	11678547	.	-	.	source_transcript=ENST00000687423.1;source_transcript_name=ENST00000687423;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000687423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000687423.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000963;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000963;transcript_name=HG00140_ch_T0000963;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000963:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11678548	11678768	.	-	.	source_transcript=ENST00000687423.1;source_transcript_name=ENST00000687423;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000687423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000687423.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000963;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000963;transcript_name=HG00140_ch_T0000963;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000963:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	11625661	11678835	1000	-	.	source_transcript=ENST00000796797.1;source_transcript_name=ENST00000796797;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796797.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000964;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_G0000307;transcript_name=HG00140_ch_T0000964;gene_name=ENSG00000291032;ID=HG00140_ch_T0000964;Name=ENSG00000291032
HG00140_chrY	CAT	exon	11625661	11626953	.	-	.	source_transcript=ENST00000796797.1;source_transcript_name=ENST00000796797;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796797.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000964;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000964;transcript_name=HG00140_ch_T0000964;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000964:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11626954	11676560	.	-	.	source_transcript=ENST00000796797.1;source_transcript_name=ENST00000796797;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796797.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000964;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000964;transcript_name=HG00140_ch_T0000964;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000964:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11676561	11676619	.	-	.	source_transcript=ENST00000796797.1;source_transcript_name=ENST00000796797;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796797.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000964;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000964;transcript_name=HG00140_ch_T0000964;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000964:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11676620	11678162	.	-	.	source_transcript=ENST00000796797.1;source_transcript_name=ENST00000796797;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796797.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000964;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000964;transcript_name=HG00140_ch_T0000964;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000964:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11678163	11678272	.	-	.	source_transcript=ENST00000796797.1;source_transcript_name=ENST00000796797;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796797.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000964;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000964;transcript_name=HG00140_ch_T0000964;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000964:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11678273	11678754	.	-	.	source_transcript=ENST00000796797.1;source_transcript_name=ENST00000796797;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796797.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000964;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000964;transcript_name=HG00140_ch_T0000964;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000964:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11678755	11678835	.	-	.	source_transcript=ENST00000796797.1;source_transcript_name=ENST00000796797;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796797.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000964;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000964;transcript_name=HG00140_ch_T0000964;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000964:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	11626199	11678841	1000	-	.	source_transcript=ENST00000796801.1;source_transcript_name=ENST00000796801;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796801.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000965;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_G0000307;transcript_name=HG00140_ch_T0000965;gene_name=ENSG00000291032;ID=HG00140_ch_T0000965;Name=ENSG00000291032
HG00140_chrY	CAT	exon	11626199	11626355	.	-	.	source_transcript=ENST00000796801.1;source_transcript_name=ENST00000796801;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796801.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000965;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000965;transcript_name=HG00140_ch_T0000965;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000965:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11626356	11626724	.	-	.	source_transcript=ENST00000796801.1;source_transcript_name=ENST00000796801;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796801.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000965;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000965;transcript_name=HG00140_ch_T0000965;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000965:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11626725	11626778	.	-	.	source_transcript=ENST00000796801.1;source_transcript_name=ENST00000796801;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796801.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000965;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000965;transcript_name=HG00140_ch_T0000965;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000965:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11626779	11626891	.	-	.	source_transcript=ENST00000796801.1;source_transcript_name=ENST00000796801;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796801.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000965;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000965;transcript_name=HG00140_ch_T0000965;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000965:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11626892	11626953	.	-	.	source_transcript=ENST00000796801.1;source_transcript_name=ENST00000796801;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796801.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000965;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000965;transcript_name=HG00140_ch_T0000965;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000965:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11626954	11676560	.	-	.	source_transcript=ENST00000796801.1;source_transcript_name=ENST00000796801;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796801.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000965;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000965;transcript_name=HG00140_ch_T0000965;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000965:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11676561	11676619	.	-	.	source_transcript=ENST00000796801.1;source_transcript_name=ENST00000796801;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796801.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000965;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000965;transcript_name=HG00140_ch_T0000965;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000965:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11676620	11678754	.	-	.	source_transcript=ENST00000796801.1;source_transcript_name=ENST00000796801;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796801.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000965;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000965;transcript_name=HG00140_ch_T0000965;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000965:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11678755	11678841	.	-	.	source_transcript=ENST00000796801.1;source_transcript_name=ENST00000796801;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796801.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796801.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000965;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000965;transcript_name=HG00140_ch_T0000965;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000965:4;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	11626199	11678797	1000	-	.	source_transcript=ENST00000796802.1;source_transcript_name=ENST00000796802;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796802.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000966;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_G0000307;transcript_name=HG00140_ch_T0000966;gene_name=ENSG00000291032;ID=HG00140_ch_T0000966;Name=ENSG00000291032
HG00140_chrY	CAT	exon	11626199	11626355	.	-	.	source_transcript=ENST00000796802.1;source_transcript_name=ENST00000796802;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000966;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000966;transcript_name=HG00140_ch_T0000966;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000966:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11626356	11626724	.	-	.	source_transcript=ENST00000796802.1;source_transcript_name=ENST00000796802;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000966;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000966;transcript_name=HG00140_ch_T0000966;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000966:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11626725	11626953	.	-	.	source_transcript=ENST00000796802.1;source_transcript_name=ENST00000796802;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000966;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000966;transcript_name=HG00140_ch_T0000966;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000966:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11626954	11673502	.	-	.	source_transcript=ENST00000796802.1;source_transcript_name=ENST00000796802;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000966;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000966;transcript_name=HG00140_ch_T0000966;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000966:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11673503	11673562	.	-	.	source_transcript=ENST00000796802.1;source_transcript_name=ENST00000796802;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000966;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000966;transcript_name=HG00140_ch_T0000966;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000966:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11673563	11676560	.	-	.	source_transcript=ENST00000796802.1;source_transcript_name=ENST00000796802;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000966;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000966;transcript_name=HG00140_ch_T0000966;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000966:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11676561	11676619	.	-	.	source_transcript=ENST00000796802.1;source_transcript_name=ENST00000796802;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000966;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000966;transcript_name=HG00140_ch_T0000966;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000966:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11676620	11678754	.	-	.	source_transcript=ENST00000796802.1;source_transcript_name=ENST00000796802;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000966;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000966;transcript_name=HG00140_ch_T0000966;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000966:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11678755	11678797	.	-	.	source_transcript=ENST00000796802.1;source_transcript_name=ENST00000796802;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000966;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000966;transcript_name=HG00140_ch_T0000966;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000966:4;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	11626633	11678309	1000	-	.	source_transcript=ENST00000796808.1;source_transcript_name=ENST00000796808;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796808.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000967;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_G0000307;transcript_name=HG00140_ch_T0000967;gene_name=ENSG00000291032;ID=HG00140_ch_T0000967;Name=ENSG00000291032
HG00140_chrY	CAT	exon	11626633	11626953	.	-	.	source_transcript=ENST00000796808.1;source_transcript_name=ENST00000796808;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796808.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000967;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000967;transcript_name=HG00140_ch_T0000967;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000967:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11626954	11676560	.	-	.	source_transcript=ENST00000796808.1;source_transcript_name=ENST00000796808;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796808.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000967;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000967;transcript_name=HG00140_ch_T0000967;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000967:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11676561	11676619	.	-	.	source_transcript=ENST00000796808.1;source_transcript_name=ENST00000796808;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796808.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000967;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000967;transcript_name=HG00140_ch_T0000967;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000967:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11676620	11678162	.	-	.	source_transcript=ENST00000796808.1;source_transcript_name=ENST00000796808;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796808.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000967;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000967;transcript_name=HG00140_ch_T0000967;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000967:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11678163	11678309	.	-	.	source_transcript=ENST00000796808.1;source_transcript_name=ENST00000796808;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796808.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796808.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000967;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000967;transcript_name=HG00140_ch_T0000967;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000967:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	11626633	11678835	1000	-	.	source_transcript=ENST00000796803.1;source_transcript_name=ENST00000796803;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796803.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000968;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_G0000307;transcript_name=HG00140_ch_T0000968;gene_name=ENSG00000291032;ID=HG00140_ch_T0000968;Name=ENSG00000291032
HG00140_chrY	CAT	exon	11626633	11626778	.	-	.	source_transcript=ENST00000796803.1;source_transcript_name=ENST00000796803;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796803.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000968;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000968;transcript_name=HG00140_ch_T0000968;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000968:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11626779	11626891	.	-	.	source_transcript=ENST00000796803.1;source_transcript_name=ENST00000796803;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796803.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000968;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000968;transcript_name=HG00140_ch_T0000968;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000968:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11626892	11626953	.	-	.	source_transcript=ENST00000796803.1;source_transcript_name=ENST00000796803;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796803.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000968;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000968;transcript_name=HG00140_ch_T0000968;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000968:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11626954	11676560	.	-	.	source_transcript=ENST00000796803.1;source_transcript_name=ENST00000796803;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796803.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000968;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000968;transcript_name=HG00140_ch_T0000968;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000968:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11676561	11676619	.	-	.	source_transcript=ENST00000796803.1;source_transcript_name=ENST00000796803;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796803.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000968;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000968;transcript_name=HG00140_ch_T0000968;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000968:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11676620	11678754	.	-	.	source_transcript=ENST00000796803.1;source_transcript_name=ENST00000796803;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796803.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000968;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000968;transcript_name=HG00140_ch_T0000968;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000968:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11678755	11678835	.	-	.	source_transcript=ENST00000796803.1;source_transcript_name=ENST00000796803;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796803.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000968;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000968;transcript_name=HG00140_ch_T0000968;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000968:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	11626633	11678814	1000	-	.	source_transcript=ENST00000796804.1;source_transcript_name=ENST00000796804;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796804.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000969;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_G0000307;transcript_name=HG00140_ch_T0000969;gene_name=ENSG00000291032;ID=HG00140_ch_T0000969;Name=ENSG00000291032
HG00140_chrY	CAT	exon	11626633	11626953	.	-	.	source_transcript=ENST00000796804.1;source_transcript_name=ENST00000796804;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000969;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000969;transcript_name=HG00140_ch_T0000969;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000969:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11626954	11673502	.	-	.	source_transcript=ENST00000796804.1;source_transcript_name=ENST00000796804;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000969;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000969;transcript_name=HG00140_ch_T0000969;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000969:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11673503	11673562	.	-	.	source_transcript=ENST00000796804.1;source_transcript_name=ENST00000796804;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000969;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000969;transcript_name=HG00140_ch_T0000969;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000969:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11673563	11676560	.	-	.	source_transcript=ENST00000796804.1;source_transcript_name=ENST00000796804;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000969;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000969;transcript_name=HG00140_ch_T0000969;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000969:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11676561	11676619	.	-	.	source_transcript=ENST00000796804.1;source_transcript_name=ENST00000796804;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000969;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000969;transcript_name=HG00140_ch_T0000969;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000969:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11676620	11678754	.	-	.	source_transcript=ENST00000796804.1;source_transcript_name=ENST00000796804;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000969;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000969;transcript_name=HG00140_ch_T0000969;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000969:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11678755	11678814	.	-	.	source_transcript=ENST00000796804.1;source_transcript_name=ENST00000796804;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796804.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796804.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000969;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000969;transcript_name=HG00140_ch_T0000969;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000969:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	11626670	11678822	1000	-	.	source_transcript=ENST00000796806.1;source_transcript_name=ENST00000796806;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796806.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000970;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_G0000307;transcript_name=HG00140_ch_T0000970;gene_name=ENSG00000291032;ID=HG00140_ch_T0000970;Name=ENSG00000291032
HG00140_chrY	CAT	exon	11626670	11626953	.	-	.	source_transcript=ENST00000796806.1;source_transcript_name=ENST00000796806;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796806.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000970;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000970;transcript_name=HG00140_ch_T0000970;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000970:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11626954	11676560	.	-	.	source_transcript=ENST00000796806.1;source_transcript_name=ENST00000796806;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796806.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000970;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000970;transcript_name=HG00140_ch_T0000970;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000970:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11676561	11676619	.	-	.	source_transcript=ENST00000796806.1;source_transcript_name=ENST00000796806;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796806.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000970;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000970;transcript_name=HG00140_ch_T0000970;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000970:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11676620	11678031	.	-	.	source_transcript=ENST00000796806.1;source_transcript_name=ENST00000796806;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796806.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000970;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000970;transcript_name=HG00140_ch_T0000970;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000970:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11678032	11678051	.	-	.	source_transcript=ENST00000796806.1;source_transcript_name=ENST00000796806;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796806.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000970;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000970;transcript_name=HG00140_ch_T0000970;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000970:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11678052	11678754	.	-	.	source_transcript=ENST00000796806.1;source_transcript_name=ENST00000796806;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796806.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000970;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000970;transcript_name=HG00140_ch_T0000970;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000970:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11678755	11678822	.	-	.	source_transcript=ENST00000796806.1;source_transcript_name=ENST00000796806;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796806.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796806.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000970;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000970;transcript_name=HG00140_ch_T0000970;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000970:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	11626670	11678835	1000	-	.	source_transcript=ENST00000796805.1;source_transcript_name=ENST00000796805;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796805.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000971;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_G0000307;transcript_name=HG00140_ch_T0000971;gene_name=ENSG00000291032;ID=HG00140_ch_T0000971;Name=ENSG00000291032
HG00140_chrY	CAT	exon	11626670	11626953	.	-	.	source_transcript=ENST00000796805.1;source_transcript_name=ENST00000796805;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796805.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000971;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000971;transcript_name=HG00140_ch_T0000971;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000971:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11626954	11642642	.	-	.	source_transcript=ENST00000796805.1;source_transcript_name=ENST00000796805;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796805.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000971;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000971;transcript_name=HG00140_ch_T0000971;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000971:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11642643	11642845	.	-	.	source_transcript=ENST00000796805.1;source_transcript_name=ENST00000796805;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796805.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000971;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000971;transcript_name=HG00140_ch_T0000971;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000971:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11642846	11676560	.	-	.	source_transcript=ENST00000796805.1;source_transcript_name=ENST00000796805;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796805.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000971;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000971;transcript_name=HG00140_ch_T0000971;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000971:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11676561	11676619	.	-	.	source_transcript=ENST00000796805.1;source_transcript_name=ENST00000796805;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796805.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000971;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000971;transcript_name=HG00140_ch_T0000971;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000971:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11676620	11678754	.	-	.	source_transcript=ENST00000796805.1;source_transcript_name=ENST00000796805;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796805.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000971;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000971;transcript_name=HG00140_ch_T0000971;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000971:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11678755	11678835	.	-	.	source_transcript=ENST00000796805.1;source_transcript_name=ENST00000796805;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796805.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796805.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000971;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000971;transcript_name=HG00140_ch_T0000971;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000971:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	11626670	11678800	1000	-	.	source_transcript=ENST00000796807.1;source_transcript_name=ENST00000796807;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796807.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000972;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_G0000307;transcript_name=HG00140_ch_T0000972;gene_name=ENSG00000291032;ID=HG00140_ch_T0000972;Name=ENSG00000291032
HG00140_chrY	CAT	exon	11626670	11626953	.	-	.	source_transcript=ENST00000796807.1;source_transcript_name=ENST00000796807;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000972;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000972;transcript_name=HG00140_ch_T0000972;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000972:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11626954	11676560	.	-	.	source_transcript=ENST00000796807.1;source_transcript_name=ENST00000796807;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000972;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000972;transcript_name=HG00140_ch_T0000972;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000972:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11676561	11676619	.	-	.	source_transcript=ENST00000796807.1;source_transcript_name=ENST00000796807;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000972;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000972;transcript_name=HG00140_ch_T0000972;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000972:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11676620	11678031	.	-	.	source_transcript=ENST00000796807.1;source_transcript_name=ENST00000796807;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000972;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000972;transcript_name=HG00140_ch_T0000972;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000972:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11678032	11678272	.	-	.	source_transcript=ENST00000796807.1;source_transcript_name=ENST00000796807;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000972;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000972;transcript_name=HG00140_ch_T0000972;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000972:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11678273	11678754	.	-	.	source_transcript=ENST00000796807.1;source_transcript_name=ENST00000796807;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000972;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000972;transcript_name=HG00140_ch_T0000972;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000972:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11678755	11678800	.	-	.	source_transcript=ENST00000796807.1;source_transcript_name=ENST00000796807;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796807.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796807.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000972;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000972;transcript_name=HG00140_ch_T0000972;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000972:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	11629767	11678844	1000	-	.	source_transcript=ENST00000796809.1;source_transcript_name=ENST00000796809;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796809.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000973;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_G0000307;transcript_name=HG00140_ch_T0000973;gene_name=ENSG00000291032;ID=HG00140_ch_T0000973;Name=ENSG00000291032
HG00140_chrY	CAT	exon	11629767	11631033	.	-	.	source_transcript=ENST00000796809.1;source_transcript_name=ENST00000796809;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796809.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000973;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000973;transcript_name=HG00140_ch_T0000973;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000973:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11631034	11676560	.	-	.	source_transcript=ENST00000796809.1;source_transcript_name=ENST00000796809;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796809.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000973;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000973;transcript_name=HG00140_ch_T0000973;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000973:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11676561	11676619	.	-	.	source_transcript=ENST00000796809.1;source_transcript_name=ENST00000796809;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796809.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000973;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000973;transcript_name=HG00140_ch_T0000973;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000973:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11676620	11678754	.	-	.	source_transcript=ENST00000796809.1;source_transcript_name=ENST00000796809;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796809.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000973;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000973;transcript_name=HG00140_ch_T0000973;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000973:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11678755	11678844	.	-	.	source_transcript=ENST00000796809.1;source_transcript_name=ENST00000796809;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796809.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000973;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000973;transcript_name=HG00140_ch_T0000973;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000973:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	11630790	11678272	1000	-	.	source_transcript=ENST00000796811.1;source_transcript_name=ENST00000796811;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796811.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000974;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_G0000307;transcript_name=HG00140_ch_T0000974;gene_name=ENSG00000291032;ID=HG00140_ch_T0000974;Name=ENSG00000291032
HG00140_chrY	CAT	exon	11630790	11631033	.	-	.	source_transcript=ENST00000796811.1;source_transcript_name=ENST00000796811;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796811.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000974;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000974;transcript_name=HG00140_ch_T0000974;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000974:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11631034	11676560	.	-	.	source_transcript=ENST00000796811.1;source_transcript_name=ENST00000796811;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796811.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000974;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000974;transcript_name=HG00140_ch_T0000974;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000974:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11676561	11676619	.	-	.	source_transcript=ENST00000796811.1;source_transcript_name=ENST00000796811;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796811.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000974;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000974;transcript_name=HG00140_ch_T0000974;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000974:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11676620	11678162	.	-	.	source_transcript=ENST00000796811.1;source_transcript_name=ENST00000796811;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796811.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000974;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000974;transcript_name=HG00140_ch_T0000974;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000974:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11678163	11678272	.	-	.	source_transcript=ENST00000796811.1;source_transcript_name=ENST00000796811;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796811.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796811.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000974;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000974;transcript_name=HG00140_ch_T0000974;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000974:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	11630792	11678272	1000	-	.	source_transcript=ENST00000796812.1;source_transcript_name=ENST00000796812;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796812.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000975;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_G0000307;transcript_name=HG00140_ch_T0000975;gene_name=ENSG00000291032;ID=HG00140_ch_T0000975;Name=ENSG00000291032
HG00140_chrY	CAT	exon	11630792	11631033	.	-	.	source_transcript=ENST00000796812.1;source_transcript_name=ENST00000796812;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796812.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000975;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000975;transcript_name=HG00140_ch_T0000975;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000975:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11631034	11673502	.	-	.	source_transcript=ENST00000796812.1;source_transcript_name=ENST00000796812;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796812.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000975;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000975;transcript_name=HG00140_ch_T0000975;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000975:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11673503	11673562	.	-	.	source_transcript=ENST00000796812.1;source_transcript_name=ENST00000796812;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796812.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000975;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000975;transcript_name=HG00140_ch_T0000975;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000975:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11673563	11676560	.	-	.	source_transcript=ENST00000796812.1;source_transcript_name=ENST00000796812;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796812.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000975;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000975;transcript_name=HG00140_ch_T0000975;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000975:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11676561	11676619	.	-	.	source_transcript=ENST00000796812.1;source_transcript_name=ENST00000796812;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796812.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000975;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000975;transcript_name=HG00140_ch_T0000975;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000975:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11676620	11678162	.	-	.	source_transcript=ENST00000796812.1;source_transcript_name=ENST00000796812;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796812.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000975;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000975;transcript_name=HG00140_ch_T0000975;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000975:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11678163	11678272	.	-	.	source_transcript=ENST00000796812.1;source_transcript_name=ENST00000796812;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796812.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000975;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000975;transcript_name=HG00140_ch_T0000975;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000975:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	11631121	11678795	1000	-	.	source_transcript=ENST00000796810.1;source_transcript_name=ENST00000796810;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796810.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000976;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_G0000307;transcript_name=HG00140_ch_T0000976;gene_name=ENSG00000291032;ID=HG00140_ch_T0000976;Name=ENSG00000291032
HG00140_chrY	CAT	exon	11631121	11631460	.	-	.	source_transcript=ENST00000796810.1;source_transcript_name=ENST00000796810;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796810.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000976;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000976;transcript_name=HG00140_ch_T0000976;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000976:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11631461	11676560	.	-	.	source_transcript=ENST00000796810.1;source_transcript_name=ENST00000796810;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796810.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000976;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000976;transcript_name=HG00140_ch_T0000976;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000976:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11676561	11676619	.	-	.	source_transcript=ENST00000796810.1;source_transcript_name=ENST00000796810;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796810.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000976;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000976;transcript_name=HG00140_ch_T0000976;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000976:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11676620	11678754	.	-	.	source_transcript=ENST00000796810.1;source_transcript_name=ENST00000796810;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796810.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000976;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000976;transcript_name=HG00140_ch_T0000976;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000976:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11678755	11678795	.	-	.	source_transcript=ENST00000796810.1;source_transcript_name=ENST00000796810;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796810.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000976;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000976;transcript_name=HG00140_ch_T0000976;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000976:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	11633393	11678840	1000	-	.	source_transcript=ENST00000796813.1;source_transcript_name=ENST00000796813;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796813.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000977;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_G0000307;transcript_name=HG00140_ch_T0000977;gene_name=ENSG00000291032;ID=HG00140_ch_T0000977;Name=ENSG00000291032
HG00140_chrY	CAT	exon	11633393	11634197	.	-	.	source_transcript=ENST00000796813.1;source_transcript_name=ENST00000796813;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796813.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000977;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000977;transcript_name=HG00140_ch_T0000977;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000977:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11634198	11676560	.	-	.	source_transcript=ENST00000796813.1;source_transcript_name=ENST00000796813;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796813.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000977;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000977;transcript_name=HG00140_ch_T0000977;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000977:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11676561	11676619	.	-	.	source_transcript=ENST00000796813.1;source_transcript_name=ENST00000796813;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796813.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000977;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000977;transcript_name=HG00140_ch_T0000977;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000977:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11676620	11678754	.	-	.	source_transcript=ENST00000796813.1;source_transcript_name=ENST00000796813;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796813.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000977;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000977;transcript_name=HG00140_ch_T0000977;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000977:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11678755	11678840	.	-	.	source_transcript=ENST00000796813.1;source_transcript_name=ENST00000796813;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796813.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000977;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000977;transcript_name=HG00140_ch_T0000977;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000977:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	11636964	11678841	1000	-	.	source_transcript=ENST00000796814.1;source_transcript_name=ENST00000796814;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796814.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796814.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000978;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_G0000307;transcript_name=HG00140_ch_T0000978;gene_name=ENSG00000291032;ID=HG00140_ch_T0000978;Name=ENSG00000291032
HG00140_chrY	CAT	exon	11636964	11637190	.	-	.	source_transcript=ENST00000796814.1;source_transcript_name=ENST00000796814;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796814.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796814.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000978;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000978;transcript_name=HG00140_ch_T0000978;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000978:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11637191	11676560	.	-	.	source_transcript=ENST00000796814.1;source_transcript_name=ENST00000796814;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796814.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796814.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000978;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000978;transcript_name=HG00140_ch_T0000978;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000978:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11676561	11676619	.	-	.	source_transcript=ENST00000796814.1;source_transcript_name=ENST00000796814;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796814.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796814.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000978;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000978;transcript_name=HG00140_ch_T0000978;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000978:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11676620	11678754	.	-	.	source_transcript=ENST00000796814.1;source_transcript_name=ENST00000796814;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796814.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796814.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000978;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000978;transcript_name=HG00140_ch_T0000978;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000978:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11678755	11678841	.	-	.	source_transcript=ENST00000796814.1;source_transcript_name=ENST00000796814;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796814.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796814.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000978;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000978;transcript_name=HG00140_ch_T0000978;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000978:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	11642367	11678822	1000	-	.	source_transcript=ENST00000796815.1;source_transcript_name=ENST00000796815;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796815.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796815.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000981;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_G0000307;transcript_name=HG00140_ch_T0000981;gene_name=ENSG00000291032;ID=HG00140_ch_T0000981;Name=ENSG00000291032
HG00140_chrY	CAT	exon	11642367	11642845	.	-	.	source_transcript=ENST00000796815.1;source_transcript_name=ENST00000796815;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796815.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796815.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000981;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000981;transcript_name=HG00140_ch_T0000981;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000981:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11642846	11676560	.	-	.	source_transcript=ENST00000796815.1;source_transcript_name=ENST00000796815;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796815.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796815.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000981;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000981;transcript_name=HG00140_ch_T0000981;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000981:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11676561	11676619	.	-	.	source_transcript=ENST00000796815.1;source_transcript_name=ENST00000796815;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796815.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796815.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000981;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000981;transcript_name=HG00140_ch_T0000981;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000981:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11676620	11678754	.	-	.	source_transcript=ENST00000796815.1;source_transcript_name=ENST00000796815;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796815.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796815.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000981;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000981;transcript_name=HG00140_ch_T0000981;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000981:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11678755	11678822	.	-	.	source_transcript=ENST00000796815.1;source_transcript_name=ENST00000796815;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796815.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796815.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000981;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000981;transcript_name=HG00140_ch_T0000981;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000981:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	11667144	11678840	1000	-	.	source_transcript=ENST00000796816.1;source_transcript_name=ENST00000796816;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796816.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000982;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_G0000307;transcript_name=HG00140_ch_T0000982;gene_name=ENSG00000291032;ID=HG00140_ch_T0000982;Name=ENSG00000291032
HG00140_chrY	CAT	exon	11667144	11667344	.	-	.	source_transcript=ENST00000796816.1;source_transcript_name=ENST00000796816;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000982;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000982;transcript_name=HG00140_ch_T0000982;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000982:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11667345	11673502	.	-	.	source_transcript=ENST00000796816.1;source_transcript_name=ENST00000796816;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000982;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000982;transcript_name=HG00140_ch_T0000982;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000982:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11673503	11673562	.	-	.	source_transcript=ENST00000796816.1;source_transcript_name=ENST00000796816;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000982;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000982;transcript_name=HG00140_ch_T0000982;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000982:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11673563	11676560	.	-	.	source_transcript=ENST00000796816.1;source_transcript_name=ENST00000796816;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000982;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000982;transcript_name=HG00140_ch_T0000982;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000982:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11676561	11676619	.	-	.	source_transcript=ENST00000796816.1;source_transcript_name=ENST00000796816;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000982;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000982;transcript_name=HG00140_ch_T0000982;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000982:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11676620	11678754	.	-	.	source_transcript=ENST00000796816.1;source_transcript_name=ENST00000796816;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000982;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000982;transcript_name=HG00140_ch_T0000982;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000982:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11678755	11678840	.	-	.	source_transcript=ENST00000796816.1;source_transcript_name=ENST00000796816;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000982;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000982;transcript_name=HG00140_ch_T0000982;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000982:3;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	11670220	11678840	1000	-	.	source_transcript=ENST00000796817.1;source_transcript_name=ENST00000796817;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796817.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000983;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_G0000307;transcript_name=HG00140_ch_T0000983;gene_name=ENSG00000291032;ID=HG00140_ch_T0000983;Name=ENSG00000291032
HG00140_chrY	CAT	exon	11670220	11670499	.	-	.	source_transcript=ENST00000796817.1;source_transcript_name=ENST00000796817;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796817.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000983;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000983;transcript_name=HG00140_ch_T0000983;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000983:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11670500	11676560	.	-	.	source_transcript=ENST00000796817.1;source_transcript_name=ENST00000796817;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796817.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000983;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000983;transcript_name=HG00140_ch_T0000983;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000983:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11676561	11676619	.	-	.	source_transcript=ENST00000796817.1;source_transcript_name=ENST00000796817;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796817.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000983;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000983;transcript_name=HG00140_ch_T0000983;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000983:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11676620	11678754	.	-	.	source_transcript=ENST00000796817.1;source_transcript_name=ENST00000796817;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796817.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000983;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000983;transcript_name=HG00140_ch_T0000983;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000983:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11678755	11678840	.	-	.	source_transcript=ENST00000796817.1;source_transcript_name=ENST00000796817;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796817.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796817.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000983;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000983;transcript_name=HG00140_ch_T0000983;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000983:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	11673354	11678835	1000	-	.	source_transcript=ENST00000796818.1;source_transcript_name=ENST00000796818;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796818.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000984;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_G0000307;transcript_name=HG00140_ch_T0000984;gene_name=ENSG00000291032;ID=HG00140_ch_T0000984;Name=ENSG00000291032
HG00140_chrY	CAT	exon	11673354	11673562	.	-	.	source_transcript=ENST00000796818.1;source_transcript_name=ENST00000796818;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796818.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000984;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000984;transcript_name=HG00140_ch_T0000984;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000984:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11673563	11676560	.	-	.	source_transcript=ENST00000796818.1;source_transcript_name=ENST00000796818;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796818.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000984;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000984;transcript_name=HG00140_ch_T0000984;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000984:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11676561	11676619	.	-	.	source_transcript=ENST00000796818.1;source_transcript_name=ENST00000796818;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796818.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000984;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000984;transcript_name=HG00140_ch_T0000984;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000984:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11676620	11678754	.	-	.	source_transcript=ENST00000796818.1;source_transcript_name=ENST00000796818;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796818.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000984;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000984;transcript_name=HG00140_ch_T0000984;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000984:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11678755	11678835	.	-	.	source_transcript=ENST00000796818.1;source_transcript_name=ENST00000796818;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796818.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796818.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000984;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000984;transcript_name=HG00140_ch_T0000984;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000984:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	11675449	11678840	1000	-	.	source_transcript=ENST00000796819.1;source_transcript_name=ENST00000796819;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796819.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000985;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_G0000307;transcript_name=HG00140_ch_T0000985;gene_name=ENSG00000291032;ID=HG00140_ch_T0000985;Name=ENSG00000291032
HG00140_chrY	CAT	exon	11675449	11676619	.	-	.	source_transcript=ENST00000796819.1;source_transcript_name=ENST00000796819;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000985;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000985;transcript_name=HG00140_ch_T0000985;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000985:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11676620	11678754	.	-	.	source_transcript=ENST00000796819.1;source_transcript_name=ENST00000796819;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000985;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000985;transcript_name=HG00140_ch_T0000985;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000985:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11678755	11678840	.	-	.	source_transcript=ENST00000796819.1;source_transcript_name=ENST00000796819;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000985;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000985;transcript_name=HG00140_ch_T0000985;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000985:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	11675449	11678795	1000	-	.	source_transcript=ENST00000796820.1;source_transcript_name=ENST00000796820;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796820.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000986;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_G0000307;transcript_name=HG00140_ch_T0000986;gene_name=ENSG00000291032;ID=HG00140_ch_T0000986;Name=ENSG00000291032
HG00140_chrY	CAT	exon	11675449	11676619	.	-	.	source_transcript=ENST00000796820.1;source_transcript_name=ENST00000796820;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796820.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000986;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000986;transcript_name=HG00140_ch_T0000986;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000986:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11676620	11678162	.	-	.	source_transcript=ENST00000796820.1;source_transcript_name=ENST00000796820;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796820.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000986;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000986;transcript_name=HG00140_ch_T0000986;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000986:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11678163	11678272	.	-	.	source_transcript=ENST00000796820.1;source_transcript_name=ENST00000796820;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796820.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000986;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000986;transcript_name=HG00140_ch_T0000986;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000986:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11678273	11678754	.	-	.	source_transcript=ENST00000796820.1;source_transcript_name=ENST00000796820;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796820.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000986;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000986;transcript_name=HG00140_ch_T0000986;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000986:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11678755	11678795	.	-	.	source_transcript=ENST00000796820.1;source_transcript_name=ENST00000796820;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796820.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796820.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000986;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000986;transcript_name=HG00140_ch_T0000986;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000986:2;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	11676584	11678768	1000	-	.	source_transcript=ENST00000796821.1;source_transcript_name=ENST00000796821;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796821.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000987;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_G0000307;transcript_name=HG00140_ch_T0000987;gene_name=ENSG00000291032;ID=HG00140_ch_T0000987;Name=ENSG00000291032
HG00140_chrY	CAT	exon	11676584	11676619	.	-	.	source_transcript=ENST00000796821.1;source_transcript_name=ENST00000796821;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796821.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000987;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000987;transcript_name=HG00140_ch_T0000987;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000987:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11676620	11677893	.	-	.	source_transcript=ENST00000796821.1;source_transcript_name=ENST00000796821;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796821.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000987;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000987;transcript_name=HG00140_ch_T0000987;gene_name=ENSG00000291032;ID=intron:HG00140_ch_T0000987:0;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11677894	11678768	.	-	.	source_transcript=ENST00000796821.1;source_transcript_name=ENST00000796821;source_gene=ENSG00000291032.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291032.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000796821.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000796821.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291032;transcript_id=HG00140_ch_T0000987;gene_id=HG00140_ch_G0000307;Parent=HG00140_ch_T0000987;transcript_name=HG00140_ch_T0000987;gene_name=ENSG00000291032;ID=exon:HG00140_ch_T0000987:1;Name=ENSG00000291032;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	11608065	11608307	.	+	.	source_gene_common_name=ENSG00000274231;source_gene=ENSG00000274231.1;alternative_source_transcripts=ENST00000619901.1,ENST00000619901.1;gene_id=HG00140_ch_G0000308;gene_biotype=processed_pseudogene;gene_name=ENSG00000274231;gene_sources=liftoff;ID=HG00140_ch_G0000308;Name=ENSG00000274231
HG00140_chrY	CAT	transcript	11608065	11608307	1000	+	.	source_transcript=ENST00000619901.1;source_transcript_name=ENST00000619901;source_gene=ENSG00000274231.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274231.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000619901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000619901.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274231;alternative_source_transcripts=ENST00000619901.1,ENST00000619901.1;transcript_id=HG00140_ch_T0000946;gene_id=HG00140_ch_G0000308;Parent=HG00140_ch_G0000308;transcript_name=HG00140_ch_T0000946;gene_name=ENSG00000274231;ID=HG00140_ch_T0000946;Name=ENSG00000274231
HG00140_chrY	CAT	exon	11608065	11608307	.	+	.	source_transcript=ENST00000619901.1;source_transcript_name=ENST00000619901;source_gene=ENSG00000274231.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274231.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000619901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000619901.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274231;alternative_source_transcripts=ENST00000619901.1,ENST00000619901.1;transcript_id=HG00140_ch_T0000946;gene_id=HG00140_ch_G0000308;Parent=HG00140_ch_T0000946;transcript_name=HG00140_ch_T0000946;gene_name=ENSG00000274231;ID=exon:HG00140_ch_T0000946:0;Name=ENSG00000274231;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	11617674	11622829	.	-	.	source_gene_common_name=ENSG00000278212;source_gene=ENSG00000278212.5;gene_id=HG00140_ch_G0000309;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000278212;gene_sources=liftoff;ID=HG00140_ch_G0000309;Name=ENSG00000278212
HG00140_chrY	CAT	transcript	11617674	11622829	1000	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=HG00140_ch_T0000954;gene_id=HG00140_ch_G0000309;Parent=HG00140_ch_G0000309;transcript_name=HG00140_ch_T0000954;gene_name=ENSG00000278212;ID=HG00140_ch_T0000954;Name=ENSG00000278212
HG00140_chrY	CAT	exon	11617674	11617886	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=HG00140_ch_T0000954;gene_id=HG00140_ch_G0000309;Parent=HG00140_ch_T0000954;transcript_name=HG00140_ch_T0000954;gene_name=ENSG00000278212;ID=exon:HG00140_ch_T0000954:0;Name=ENSG00000278212;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11617887	11618701	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=HG00140_ch_T0000954;gene_id=HG00140_ch_G0000309;Parent=HG00140_ch_T0000954;transcript_name=HG00140_ch_T0000954;gene_name=ENSG00000278212;ID=intron:HG00140_ch_T0000954:0;Name=ENSG00000278212;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11618702	11618856	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=HG00140_ch_T0000954;gene_id=HG00140_ch_G0000309;Parent=HG00140_ch_T0000954;transcript_name=HG00140_ch_T0000954;gene_name=ENSG00000278212;ID=exon:HG00140_ch_T0000954:1;Name=ENSG00000278212;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11618857	11619469	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=HG00140_ch_T0000954;gene_id=HG00140_ch_G0000309;Parent=HG00140_ch_T0000954;transcript_name=HG00140_ch_T0000954;gene_name=ENSG00000278212;ID=intron:HG00140_ch_T0000954:1;Name=ENSG00000278212;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11619470	11619700	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=HG00140_ch_T0000954;gene_id=HG00140_ch_G0000309;Parent=HG00140_ch_T0000954;transcript_name=HG00140_ch_T0000954;gene_name=ENSG00000278212;ID=exon:HG00140_ch_T0000954:2;Name=ENSG00000278212;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11619701	11620383	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=HG00140_ch_T0000954;gene_id=HG00140_ch_G0000309;Parent=HG00140_ch_T0000954;transcript_name=HG00140_ch_T0000954;gene_name=ENSG00000278212;ID=intron:HG00140_ch_T0000954:2;Name=ENSG00000278212;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11620384	11620504	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=HG00140_ch_T0000954;gene_id=HG00140_ch_G0000309;Parent=HG00140_ch_T0000954;transcript_name=HG00140_ch_T0000954;gene_name=ENSG00000278212;ID=exon:HG00140_ch_T0000954:3;Name=ENSG00000278212;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11620505	11620868	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=HG00140_ch_T0000954;gene_id=HG00140_ch_G0000309;Parent=HG00140_ch_T0000954;transcript_name=HG00140_ch_T0000954;gene_name=ENSG00000278212;ID=intron:HG00140_ch_T0000954:3;Name=ENSG00000278212;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11620869	11620939	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=HG00140_ch_T0000954;gene_id=HG00140_ch_G0000309;Parent=HG00140_ch_T0000954;transcript_name=HG00140_ch_T0000954;gene_name=ENSG00000278212;ID=exon:HG00140_ch_T0000954:4;Name=ENSG00000278212;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11620940	11622352	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=HG00140_ch_T0000954;gene_id=HG00140_ch_G0000309;Parent=HG00140_ch_T0000954;transcript_name=HG00140_ch_T0000954;gene_name=ENSG00000278212;ID=intron:HG00140_ch_T0000954:4;Name=ENSG00000278212;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11622353	11622829	.	-	.	source_transcript=ENST00000620700.2;source_transcript_name=ENST00000620700;source_gene=ENSG00000278212.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000278212.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000620700.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000620700.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278212;transcript_id=HG00140_ch_T0000954;gene_id=HG00140_ch_G0000309;Parent=HG00140_ch_T0000954;transcript_name=HG00140_ch_T0000954;gene_name=ENSG00000278212;ID=exon:HG00140_ch_T0000954:5;Name=ENSG00000278212;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	11637431	11637634	.	+	.	source_gene_common_name=ANKRD20A6P;source_gene=ENSG00000274502.1;alternative_source_transcripts=ENST00000618763.1,ENST00000618763.1;gene_id=HG00140_ch_G0000310;gene_biotype=processed_pseudogene;gene_name=ANKRD20A6P;gene_sources=liftoff;ID=HG00140_ch_G0000310;Name=ANKRD20A6P
HG00140_chrY	CAT	transcript	11637431	11637634	1000	+	.	source_transcript=ENST00000618763.1;source_transcript_name=ANKRD20A6P-201;source_gene=ENSG00000274502.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274502.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000618763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618763.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD20A6P;alternative_source_transcripts=ENST00000618763.1,ENST00000618763.1;transcript_id=HG00140_ch_T0000979;gene_id=HG00140_ch_G0000310;Parent=HG00140_ch_G0000310;transcript_name=HG00140_ch_T0000979;gene_name=ANKRD20A6P;ID=HG00140_ch_T0000979;Name=ANKRD20A6P
HG00140_chrY	CAT	exon	11637431	11637634	.	+	.	source_transcript=ENST00000618763.1;source_transcript_name=ANKRD20A6P-201;source_gene=ENSG00000274502.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274502.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000618763.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618763.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD20A6P;alternative_source_transcripts=ENST00000618763.1,ENST00000618763.1;transcript_id=HG00140_ch_T0000979;gene_id=HG00140_ch_G0000310;Parent=HG00140_ch_T0000979;transcript_name=HG00140_ch_T0000979;gene_name=ANKRD20A6P;ID=exon:HG00140_ch_T0000979:0;Name=ANKRD20A6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	11642121	11642631	.	+	.	source_gene_common_name=SNX18P1Y;source_gene=ENSG00000274162.1;alternative_source_transcripts=ENST00000616231.1,ENST00000616231.1;gene_id=HG00140_ch_G0000311;gene_biotype=processed_pseudogene;gene_name=SNX18P1Y;gene_sources=liftoff;ID=HG00140_ch_G0000311;Name=SNX18P1Y
HG00140_chrY	CAT	transcript	11642121	11642631	1000	+	.	source_transcript=ENST00000616231.1;source_transcript_name=SNX18P1Y-201;source_gene=ENSG00000274162.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274162.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000616231.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000616231.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SNX18P1Y;alternative_source_transcripts=ENST00000616231.1,ENST00000616231.1;transcript_id=HG00140_ch_T0000980;gene_id=HG00140_ch_G0000311;Parent=HG00140_ch_G0000311;transcript_name=HG00140_ch_T0000980;gene_name=SNX18P1Y;ID=HG00140_ch_T0000980;Name=SNX18P1Y
HG00140_chrY	CAT	exon	11642121	11642631	.	+	.	source_transcript=ENST00000616231.1;source_transcript_name=SNX18P1Y-201;source_gene=ENSG00000274162.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274162.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000616231.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000616231.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SNX18P1Y;alternative_source_transcripts=ENST00000616231.1,ENST00000616231.1;transcript_id=HG00140_ch_T0000980;gene_id=HG00140_ch_G0000311;Parent=HG00140_ch_T0000980;transcript_name=HG00140_ch_T0000980;gene_name=SNX18P1Y;ID=exon:HG00140_ch_T0000980:0;Name=SNX18P1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	11770714	11771977	.	+	.	source_gene_common_name=DUX4L16;source_gene=ENSG00000258567.1;alternative_source_transcripts=ENST00000555130.1,ENST00000555130.1;gene_id=HG00140_ch_G0000312;gene_biotype=unprocessed_pseudogene;gene_name=DUX4L16;gene_sources=liftoff;ID=HG00140_ch_G0000312;Name=DUX4L16
HG00140_chrY	CAT	transcript	11770714	11771977	1000	+	.	source_transcript=ENST00000555130.1;source_transcript_name=DUX4L16-201;source_gene=ENSG00000258567.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000258567.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000555130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000555130.1;transcript_score=199.921;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DUX4L16;alternative_source_transcripts=ENST00000555130.1,ENST00000555130.1;transcript_id=HG00140_ch_T0000988;gene_id=HG00140_ch_G0000312;Parent=HG00140_ch_G0000312;transcript_name=HG00140_ch_T0000988;gene_name=DUX4L16;ID=HG00140_ch_T0000988;Name=DUX4L16
HG00140_chrY	CAT	exon	11770714	11771977	.	+	.	source_transcript=ENST00000555130.1;source_transcript_name=DUX4L16-201;source_gene=ENSG00000258567.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000258567.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000555130.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000555130.1;transcript_score=199.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DUX4L16;alternative_source_transcripts=ENST00000555130.1,ENST00000555130.1;transcript_id=HG00140_ch_T0000988;gene_id=HG00140_ch_G0000312;Parent=HG00140_ch_T0000988;transcript_name=HG00140_ch_T0000988;gene_name=DUX4L16;ID=exon:HG00140_ch_T0000988:0;Name=DUX4L16;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	11778717	11779983	.	+	.	source_gene_common_name=DUX4L17;source_gene=ENSG00000259154.1;alternative_source_transcripts=ENST00000557360.1,ENST00000557360.1;gene_id=HG00140_ch_G0000313;gene_biotype=unprocessed_pseudogene;gene_name=DUX4L17;gene_sources=liftoff;ID=HG00140_ch_G0000313;Name=DUX4L17
HG00140_chrY	CAT	transcript	11778717	11779983	1000	+	.	source_transcript=ENST00000557360.1;source_transcript_name=DUX4L17-201;source_gene=ENSG00000259154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000259154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000557360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000557360.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DUX4L17;alternative_source_transcripts=ENST00000557360.1,ENST00000557360.1;transcript_id=HG00140_ch_T0000989;gene_id=HG00140_ch_G0000313;Parent=HG00140_ch_G0000313;transcript_name=HG00140_ch_T0000989;gene_name=DUX4L17;ID=HG00140_ch_T0000989;Name=DUX4L17
HG00140_chrY	CAT	exon	11778717	11779983	.	+	.	source_transcript=ENST00000557360.1;source_transcript_name=DUX4L17-201;source_gene=ENSG00000259154.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000259154.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000557360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000557360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DUX4L17;alternative_source_transcripts=ENST00000557360.1,ENST00000557360.1;transcript_id=HG00140_ch_T0000989;gene_id=HG00140_ch_G0000313;Parent=HG00140_ch_T0000989;transcript_name=HG00140_ch_T0000989;gene_name=DUX4L17;ID=exon:HG00140_ch_T0000989:0;Name=DUX4L17;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	11785353	11786619	.	+	.	source_gene_common_name=DUX4L18;source_gene=ENSG00000259029.1;alternative_source_transcripts=ENST00000553347.1,ENST00000553347.1;gene_id=HG00140_ch_G0000314;gene_biotype=unprocessed_pseudogene;gene_name=DUX4L18;gene_sources=liftoff;ID=HG00140_ch_G0000314;Name=DUX4L18
HG00140_chrY	CAT	transcript	11785353	11786619	1000	+	.	source_transcript=ENST00000553347.1;source_transcript_name=DUX4L18-201;source_gene=ENSG00000259029.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000259029.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000553347.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000553347.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DUX4L18;alternative_source_transcripts=ENST00000553347.1,ENST00000553347.1;transcript_id=HG00140_ch_T0000990;gene_id=HG00140_ch_G0000314;Parent=HG00140_ch_G0000314;transcript_name=HG00140_ch_T0000990;gene_name=DUX4L18;ID=HG00140_ch_T0000990;Name=DUX4L18
HG00140_chrY	CAT	exon	11785353	11786619	.	+	.	source_transcript=ENST00000553347.1;source_transcript_name=DUX4L18-201;source_gene=ENSG00000259029.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000259029.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000553347.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000553347.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DUX4L18;alternative_source_transcripts=ENST00000553347.1,ENST00000553347.1;transcript_id=HG00140_ch_T0000990;gene_id=HG00140_ch_G0000314;Parent=HG00140_ch_T0000990;transcript_name=HG00140_ch_T0000990;gene_name=DUX4L18;ID=exon:HG00140_ch_T0000990:0;Name=DUX4L18;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	11796126	11797392	.	+	.	source_gene_common_name=DUX4L19;source_gene=ENSG00000258991.1;alternative_source_transcripts=ENST00000557448.1,ENST00000557448.1;gene_id=HG00140_ch_G0000315;gene_biotype=unprocessed_pseudogene;gene_name=DUX4L19;gene_sources=liftoff;ID=HG00140_ch_G0000315;Name=DUX4L19
HG00140_chrY	CAT	transcript	11796126	11797392	1000	+	.	source_transcript=ENST00000557448.1;source_transcript_name=DUX4L19-201;source_gene=ENSG00000258991.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000258991.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000557448.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000557448.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DUX4L19;alternative_source_transcripts=ENST00000557448.1,ENST00000557448.1;transcript_id=HG00140_ch_T0000991;gene_id=HG00140_ch_G0000315;Parent=HG00140_ch_G0000315;transcript_name=HG00140_ch_T0000991;gene_name=DUX4L19;ID=HG00140_ch_T0000991;Name=DUX4L19
HG00140_chrY	CAT	exon	11796126	11797392	.	+	.	source_transcript=ENST00000557448.1;source_transcript_name=DUX4L19-201;source_gene=ENSG00000258991.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000258991.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000557448.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000557448.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DUX4L19;alternative_source_transcripts=ENST00000557448.1,ENST00000557448.1;transcript_id=HG00140_ch_T0000991;gene_id=HG00140_ch_G0000315;Parent=HG00140_ch_T0000991;transcript_name=HG00140_ch_T0000991;gene_name=DUX4L19;ID=exon:HG00140_ch_T0000991:0;Name=DUX4L19;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	11799424	11801491	.	+	.	source_gene_common_name=PABPC1P5;source_gene=ENSG00000270455.1;alternative_source_transcripts=ENST00000603738.1,ENST00000603738.1;gene_id=HG00140_ch_G0000316;gene_biotype=processed_pseudogene;gene_name=PABPC1P5;gene_sources=liftoff;ID=HG00140_ch_G0000316;Name=PABPC1P5
HG00140_chrY	CAT	transcript	11799424	11801491	1000	+	.	source_transcript=ENST00000603738.1;source_transcript_name=PABPC1P5-201;source_gene=ENSG00000270455.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270455.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000603738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000603738.1;transcript_score=299.94;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PABPC1P5;alternative_source_transcripts=ENST00000603738.1,ENST00000603738.1;transcript_id=HG00140_ch_T0000992;gene_id=HG00140_ch_G0000316;Parent=HG00140_ch_G0000316;transcript_name=HG00140_ch_T0000992;gene_name=PABPC1P5;ID=HG00140_ch_T0000992;Name=PABPC1P5
HG00140_chrY	CAT	exon	11799424	11799592	.	+	.	source_transcript=ENST00000603738.1;source_transcript_name=PABPC1P5-201;source_gene=ENSG00000270455.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270455.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000603738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000603738.1;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PABPC1P5;alternative_source_transcripts=ENST00000603738.1,ENST00000603738.1;transcript_id=HG00140_ch_T0000992;gene_id=HG00140_ch_G0000316;Parent=HG00140_ch_T0000992;transcript_name=HG00140_ch_T0000992;gene_name=PABPC1P5;ID=exon:HG00140_ch_T0000992:0;Name=PABPC1P5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11799593	11799983	.	+	.	source_transcript=ENST00000603738.1;source_transcript_name=PABPC1P5-201;source_gene=ENSG00000270455.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270455.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000603738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000603738.1;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PABPC1P5;alternative_source_transcripts=ENST00000603738.1,ENST00000603738.1;transcript_id=HG00140_ch_T0000992;gene_id=HG00140_ch_G0000316;Parent=HG00140_ch_T0000992;transcript_name=HG00140_ch_T0000992;gene_name=PABPC1P5;ID=intron:HG00140_ch_T0000992:0;Name=PABPC1P5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11799984	11801491	.	+	.	source_transcript=ENST00000603738.1;source_transcript_name=PABPC1P5-201;source_gene=ENSG00000270455.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270455.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000603738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000603738.1;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PABPC1P5;alternative_source_transcripts=ENST00000603738.1,ENST00000603738.1;transcript_id=HG00140_ch_T0000992;gene_id=HG00140_ch_G0000316;Parent=HG00140_ch_T0000992;transcript_name=HG00140_ch_T0000992;gene_name=PABPC1P5;ID=exon:HG00140_ch_T0000992:1;Name=PABPC1P5;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	11804377	11849482	.	-	.	source_gene_common_name=SLC9B1P1;source_gene=ENSG00000183704.7;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;gene_id=HG00140_ch_G0000317;gene_biotype=unprocessed_pseudogene;gene_name=SLC9B1P1;gene_sources=liftoff;ID=HG00140_ch_G0000317;Name=SLC9B1P1
HG00140_chrY	CAT	transcript	11804377	11849482	1000	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG00140_ch_T0000993;gene_id=HG00140_ch_G0000317;Parent=HG00140_ch_G0000317;transcript_name=HG00140_ch_T0000993;gene_name=SLC9B1P1;ID=HG00140_ch_T0000993;Name=SLC9B1P1
HG00140_chrY	CAT	exon	11804377	11804592	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG00140_ch_T0000993;gene_id=HG00140_ch_G0000317;Parent=HG00140_ch_T0000993;transcript_name=HG00140_ch_T0000993;gene_name=SLC9B1P1;ID=exon:HG00140_ch_T0000993:0;Name=SLC9B1P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11804593	11808765	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG00140_ch_T0000993;gene_id=HG00140_ch_G0000317;Parent=HG00140_ch_T0000993;transcript_name=HG00140_ch_T0000993;gene_name=SLC9B1P1;ID=intron:HG00140_ch_T0000993:0;Name=SLC9B1P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11808766	11808902	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG00140_ch_T0000993;gene_id=HG00140_ch_G0000317;Parent=HG00140_ch_T0000993;transcript_name=HG00140_ch_T0000993;gene_name=SLC9B1P1;ID=exon:HG00140_ch_T0000993:1;Name=SLC9B1P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11808903	11809789	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG00140_ch_T0000993;gene_id=HG00140_ch_G0000317;Parent=HG00140_ch_T0000993;transcript_name=HG00140_ch_T0000993;gene_name=SLC9B1P1;ID=intron:HG00140_ch_T0000993:1;Name=SLC9B1P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11809790	11809898	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG00140_ch_T0000993;gene_id=HG00140_ch_G0000317;Parent=HG00140_ch_T0000993;transcript_name=HG00140_ch_T0000993;gene_name=SLC9B1P1;ID=exon:HG00140_ch_T0000993:2;Name=SLC9B1P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11809899	11813682	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG00140_ch_T0000993;gene_id=HG00140_ch_G0000317;Parent=HG00140_ch_T0000993;transcript_name=HG00140_ch_T0000993;gene_name=SLC9B1P1;ID=intron:HG00140_ch_T0000993:2;Name=SLC9B1P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11813683	11813832	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG00140_ch_T0000993;gene_id=HG00140_ch_G0000317;Parent=HG00140_ch_T0000993;transcript_name=HG00140_ch_T0000993;gene_name=SLC9B1P1;ID=exon:HG00140_ch_T0000993:3;Name=SLC9B1P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11813833	11814674	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG00140_ch_T0000993;gene_id=HG00140_ch_G0000317;Parent=HG00140_ch_T0000993;transcript_name=HG00140_ch_T0000993;gene_name=SLC9B1P1;ID=intron:HG00140_ch_T0000993:3;Name=SLC9B1P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11814675	11814781	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG00140_ch_T0000993;gene_id=HG00140_ch_G0000317;Parent=HG00140_ch_T0000993;transcript_name=HG00140_ch_T0000993;gene_name=SLC9B1P1;ID=exon:HG00140_ch_T0000993:4;Name=SLC9B1P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11814782	11832664	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG00140_ch_T0000993;gene_id=HG00140_ch_G0000317;Parent=HG00140_ch_T0000993;transcript_name=HG00140_ch_T0000993;gene_name=SLC9B1P1;ID=intron:HG00140_ch_T0000993:4;Name=SLC9B1P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11832665	11832840	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG00140_ch_T0000993;gene_id=HG00140_ch_G0000317;Parent=HG00140_ch_T0000993;transcript_name=HG00140_ch_T0000993;gene_name=SLC9B1P1;ID=exon:HG00140_ch_T0000993:5;Name=SLC9B1P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11832841	11845422	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG00140_ch_T0000993;gene_id=HG00140_ch_G0000317;Parent=HG00140_ch_T0000993;transcript_name=HG00140_ch_T0000993;gene_name=SLC9B1P1;ID=intron:HG00140_ch_T0000993:5;Name=SLC9B1P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11845423	11845550	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG00140_ch_T0000993;gene_id=HG00140_ch_G0000317;Parent=HG00140_ch_T0000993;transcript_name=HG00140_ch_T0000993;gene_name=SLC9B1P1;ID=exon:HG00140_ch_T0000993:6;Name=SLC9B1P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11845551	11846664	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG00140_ch_T0000993;gene_id=HG00140_ch_G0000317;Parent=HG00140_ch_T0000993;transcript_name=HG00140_ch_T0000993;gene_name=SLC9B1P1;ID=intron:HG00140_ch_T0000993:6;Name=SLC9B1P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11846665	11846807	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG00140_ch_T0000993;gene_id=HG00140_ch_G0000317;Parent=HG00140_ch_T0000993;transcript_name=HG00140_ch_T0000993;gene_name=SLC9B1P1;ID=exon:HG00140_ch_T0000993:7;Name=SLC9B1P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11846808	11849311	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG00140_ch_T0000993;gene_id=HG00140_ch_G0000317;Parent=HG00140_ch_T0000993;transcript_name=HG00140_ch_T0000993;gene_name=SLC9B1P1;ID=intron:HG00140_ch_T0000993:7;Name=SLC9B1P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11849312	11849482	.	-	.	source_transcript=ENST00000331172.7;source_transcript_name=SLC9B1P1-201;source_gene=ENSG00000183704.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000183704.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000331172.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000331172.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC9B1P1;alternative_source_transcripts=ENST00000331172.7,ENST00000331172.7;transcript_id=HG00140_ch_T0000993;gene_id=HG00140_ch_G0000317;Parent=HG00140_ch_T0000993;transcript_name=HG00140_ch_T0000993;gene_name=SLC9B1P1;ID=exon:HG00140_ch_T0000993:8;Name=SLC9B1P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	11859498	11860875	.	+	.	source_gene_common_name=ACTR3BP1;source_gene=ENSG00000270242.1;alternative_source_transcripts=ENST00000605584.1,ENST00000605584.1;gene_id=HG00140_ch_G0000318;gene_biotype=processed_pseudogene;gene_name=ACTR3BP1;gene_sources=liftoff;ID=HG00140_ch_G0000318;Name=ACTR3BP1
HG00140_chrY	CAT	transcript	11859498	11860875	1000	+	.	source_transcript=ENST00000605584.1;source_transcript_name=ACTR3BP1-201;source_gene=ENSG00000270242.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270242.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000605584.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000605584.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ACTR3BP1;alternative_source_transcripts=ENST00000605584.1,ENST00000605584.1;transcript_id=HG00140_ch_T0000994;gene_id=HG00140_ch_G0000318;Parent=HG00140_ch_G0000318;transcript_name=HG00140_ch_T0000994;gene_name=ACTR3BP1;ID=HG00140_ch_T0000994;Name=ACTR3BP1
HG00140_chrY	CAT	exon	11859498	11859538	.	+	.	source_transcript=ENST00000605584.1;source_transcript_name=ACTR3BP1-201;source_gene=ENSG00000270242.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270242.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000605584.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000605584.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ACTR3BP1;alternative_source_transcripts=ENST00000605584.1,ENST00000605584.1;transcript_id=HG00140_ch_T0000994;gene_id=HG00140_ch_G0000318;Parent=HG00140_ch_T0000994;transcript_name=HG00140_ch_T0000994;gene_name=ACTR3BP1;ID=exon:HG00140_ch_T0000994:0;Name=ACTR3BP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11859539	11859669	.	+	.	source_transcript=ENST00000605584.1;source_transcript_name=ACTR3BP1-201;source_gene=ENSG00000270242.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270242.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000605584.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000605584.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ACTR3BP1;alternative_source_transcripts=ENST00000605584.1,ENST00000605584.1;transcript_id=HG00140_ch_T0000994;gene_id=HG00140_ch_G0000318;Parent=HG00140_ch_T0000994;transcript_name=HG00140_ch_T0000994;gene_name=ACTR3BP1;ID=intron:HG00140_ch_T0000994:0;Name=ACTR3BP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11859670	11860875	.	+	.	source_transcript=ENST00000605584.1;source_transcript_name=ACTR3BP1-201;source_gene=ENSG00000270242.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270242.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000605584.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000605584.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ACTR3BP1;alternative_source_transcripts=ENST00000605584.1,ENST00000605584.1;transcript_id=HG00140_ch_T0000994;gene_id=HG00140_ch_G0000318;Parent=HG00140_ch_T0000994;transcript_name=HG00140_ch_T0000994;gene_name=ACTR3BP1;ID=exon:HG00140_ch_T0000994:1;Name=ACTR3BP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	11876350	11882518	.	+	.	source_gene_common_name=CHEK2P1;source_gene=ENSG00000275828.1;alternative_source_transcripts=ENST00000614446.1,ENST00000614446.1;gene_id=HG00140_ch_G0000319;gene_biotype=unprocessed_pseudogene;gene_name=CHEK2P1;gene_sources=liftoff;ID=HG00140_ch_G0000319;Name=CHEK2P1
HG00140_chrY	CAT	transcript	11876350	11882518	1000	+	.	source_transcript=ENST00000614446.1;source_transcript_name=CHEK2P1-201;source_gene=ENSG00000275828.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275828.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000614446.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614446.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CHEK2P1;alternative_source_transcripts=ENST00000614446.1,ENST00000614446.1;transcript_id=HG00140_ch_T0000995;gene_id=HG00140_ch_G0000319;Parent=HG00140_ch_G0000319;transcript_name=HG00140_ch_T0000995;gene_name=CHEK2P1;ID=HG00140_ch_T0000995;Name=CHEK2P1
HG00140_chrY	CAT	exon	11876350	11876435	.	+	.	source_transcript=ENST00000614446.1;source_transcript_name=CHEK2P1-201;source_gene=ENSG00000275828.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275828.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000614446.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614446.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CHEK2P1;alternative_source_transcripts=ENST00000614446.1,ENST00000614446.1;transcript_id=HG00140_ch_T0000995;gene_id=HG00140_ch_G0000319;Parent=HG00140_ch_T0000995;transcript_name=HG00140_ch_T0000995;gene_name=CHEK2P1;ID=exon:HG00140_ch_T0000995:0;Name=CHEK2P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11876436	11881198	.	+	.	source_transcript=ENST00000614446.1;source_transcript_name=CHEK2P1-201;source_gene=ENSG00000275828.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275828.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000614446.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614446.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CHEK2P1;alternative_source_transcripts=ENST00000614446.1,ENST00000614446.1;transcript_id=HG00140_ch_T0000995;gene_id=HG00140_ch_G0000319;Parent=HG00140_ch_T0000995;transcript_name=HG00140_ch_T0000995;gene_name=CHEK2P1;ID=intron:HG00140_ch_T0000995:0;Name=CHEK2P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11881199	11881279	.	+	.	source_transcript=ENST00000614446.1;source_transcript_name=CHEK2P1-201;source_gene=ENSG00000275828.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275828.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000614446.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614446.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CHEK2P1;alternative_source_transcripts=ENST00000614446.1,ENST00000614446.1;transcript_id=HG00140_ch_T0000995;gene_id=HG00140_ch_G0000319;Parent=HG00140_ch_T0000995;transcript_name=HG00140_ch_T0000995;gene_name=CHEK2P1;ID=exon:HG00140_ch_T0000995:1;Name=CHEK2P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11881280	11882431	.	+	.	source_transcript=ENST00000614446.1;source_transcript_name=CHEK2P1-201;source_gene=ENSG00000275828.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275828.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000614446.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614446.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CHEK2P1;alternative_source_transcripts=ENST00000614446.1,ENST00000614446.1;transcript_id=HG00140_ch_T0000995;gene_id=HG00140_ch_G0000319;Parent=HG00140_ch_T0000995;transcript_name=HG00140_ch_T0000995;gene_name=CHEK2P1;ID=intron:HG00140_ch_T0000995:1;Name=CHEK2P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11882432	11882518	.	+	.	source_transcript=ENST00000614446.1;source_transcript_name=CHEK2P1-201;source_gene=ENSG00000275828.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000275828.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000614446.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000614446.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CHEK2P1;alternative_source_transcripts=ENST00000614446.1,ENST00000614446.1;transcript_id=HG00140_ch_T0000995;gene_id=HG00140_ch_G0000319;Parent=HG00140_ch_T0000995;transcript_name=HG00140_ch_T0000995;gene_name=CHEK2P1;ID=exon:HG00140_ch_T0000995:2;Name=CHEK2P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	11909220	11909366	.	-	.	source_gene_common_name=MTND1P12;source_gene=ENSG00000225433.3;alternative_source_transcripts=ENST00000455231.3,ENST00000455231.3;gene_id=HG00140_ch_G0000320;gene_biotype=unprocessed_pseudogene;gene_name=MTND1P12;gene_sources=liftoff;ID=HG00140_ch_G0000320;Name=MTND1P12
HG00140_chrY	CAT	transcript	11909220	11909366	1000	-	.	source_transcript=ENST00000455231.3;source_transcript_name=MTND1P12-201;source_gene=ENSG00000225433.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225433.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455231.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000455231.3;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTND1P12;alternative_source_transcripts=ENST00000455231.3,ENST00000455231.3;transcript_id=HG00140_ch_T0000996;gene_id=HG00140_ch_G0000320;Parent=HG00140_ch_G0000320;transcript_name=HG00140_ch_T0000996;gene_name=MTND1P12;ID=HG00140_ch_T0000996;Name=MTND1P12
HG00140_chrY	CAT	exon	11909220	11909366	.	-	.	source_transcript=ENST00000455231.3;source_transcript_name=MTND1P12-201;source_gene=ENSG00000225433.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225433.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455231.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000455231.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTND1P12;alternative_source_transcripts=ENST00000455231.3,ENST00000455231.3;transcript_id=HG00140_ch_T0000996;gene_id=HG00140_ch_G0000320;Parent=HG00140_ch_T0000996;transcript_name=HG00140_ch_T0000996;gene_name=MTND1P12;ID=exon:HG00140_ch_T0000996:0;Name=MTND1P12;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	11909510	11909903	.	-	.	source_gene_common_name=ENSG00000224567;source_gene=ENSG00000224567.2;alternative_source_transcripts=ENST00000426062.2,ENST00000426062.2;gene_id=HG00140_ch_G0000321;gene_biotype=processed_pseudogene;gene_name=ENSG00000224567;gene_sources=liftoff;ID=HG00140_ch_G0000321;Name=ENSG00000224567
HG00140_chrY	CAT	transcript	11909510	11909903	1000	-	.	source_transcript=ENST00000426062.2;source_transcript_name=ENST00000426062;source_gene=ENSG00000224567.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224567.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000426062.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426062.2;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224567;alternative_source_transcripts=ENST00000426062.2,ENST00000426062.2;transcript_id=HG00140_ch_T0000997;gene_id=HG00140_ch_G0000321;Parent=HG00140_ch_G0000321;transcript_name=HG00140_ch_T0000997;gene_name=ENSG00000224567;ID=HG00140_ch_T0000997;Name=ENSG00000224567
HG00140_chrY	CAT	exon	11909510	11909903	.	-	.	source_transcript=ENST00000426062.2;source_transcript_name=ENST00000426062;source_gene=ENSG00000224567.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224567.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000426062.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000426062.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224567;alternative_source_transcripts=ENST00000426062.2,ENST00000426062.2;transcript_id=HG00140_ch_T0000997;gene_id=HG00140_ch_G0000321;Parent=HG00140_ch_T0000997;transcript_name=HG00140_ch_T0000997;gene_name=ENSG00000224567;ID=exon:HG00140_ch_T0000997:0;Name=ENSG00000224567;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	11937533	11938043	.	-	.	source_gene_common_name=ENSG00000271375;source_gene=ENSG00000271375.1;alternative_source_transcripts=ENST00000604178.1,ENST00000604178.1;gene_id=HG00140_ch_G0000322;gene_biotype=processed_pseudogene;gene_name=ENSG00000271375;gene_sources=liftoff;ID=HG00140_ch_G0000322;Name=ENSG00000271375
HG00140_chrY	CAT	transcript	11937533	11938043	1000	-	.	source_transcript=ENST00000604178.1;source_transcript_name=ENST00000604178;source_gene=ENSG00000271375.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271375.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604178.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604178.1;transcript_score=299.486;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000271375;alternative_source_transcripts=ENST00000604178.1,ENST00000604178.1;transcript_id=HG00140_ch_T0000998;gene_id=HG00140_ch_G0000322;Parent=HG00140_ch_G0000322;transcript_name=HG00140_ch_T0000998;gene_name=ENSG00000271375;ID=HG00140_ch_T0000998;Name=ENSG00000271375
HG00140_chrY	CAT	exon	11937533	11937863	.	-	.	source_transcript=ENST00000604178.1;source_transcript_name=ENST00000604178;source_gene=ENSG00000271375.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271375.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604178.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604178.1;transcript_score=299.486;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000271375;alternative_source_transcripts=ENST00000604178.1,ENST00000604178.1;transcript_id=HG00140_ch_T0000998;gene_id=HG00140_ch_G0000322;Parent=HG00140_ch_T0000998;transcript_name=HG00140_ch_T0000998;gene_name=ENSG00000271375;ID=exon:HG00140_ch_T0000998:0;Name=ENSG00000271375;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	11937864	11937985	.	-	.	source_transcript=ENST00000604178.1;source_transcript_name=ENST00000604178;source_gene=ENSG00000271375.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271375.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604178.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604178.1;transcript_score=299.486;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000271375;alternative_source_transcripts=ENST00000604178.1,ENST00000604178.1;transcript_id=HG00140_ch_T0000998;gene_id=HG00140_ch_G0000322;Parent=HG00140_ch_T0000998;transcript_name=HG00140_ch_T0000998;gene_name=ENSG00000271375;ID=intron:HG00140_ch_T0000998:0;Name=ENSG00000271375;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	11937986	11938043	.	-	.	source_transcript=ENST00000604178.1;source_transcript_name=ENST00000604178;source_gene=ENSG00000271375.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271375.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604178.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604178.1;transcript_score=299.486;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000271375;alternative_source_transcripts=ENST00000604178.1,ENST00000604178.1;transcript_id=HG00140_ch_T0000998;gene_id=HG00140_ch_G0000322;Parent=HG00140_ch_T0000998;transcript_name=HG00140_ch_T0000998;gene_name=ENSG00000271375;ID=exon:HG00140_ch_T0000998:1;Name=ENSG00000271375;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	12970174	12971648	.	-	.	source_gene_common_name=RCC2P1;source_gene=ENSG00000234385.1;alternative_source_transcripts=ENST00000452257.1,ENST00000452257.1;gene_id=HG00140_ch_G0000323;gene_biotype=processed_pseudogene;gene_name=RCC2P1;gene_sources=liftoff;ID=HG00140_ch_G0000323;Name=RCC2P1
HG00140_chrY	CAT	transcript	12970174	12971648	1000	-	.	source_transcript=ENST00000452257.1;source_transcript_name=RCC2P1-201;source_gene=ENSG00000234385.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234385.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000452257.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452257.1;transcript_score=199.864;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RCC2P1;alternative_source_transcripts=ENST00000452257.1,ENST00000452257.1;transcript_id=HG00140_ch_T0000999;gene_id=HG00140_ch_G0000323;Parent=HG00140_ch_G0000323;transcript_name=HG00140_ch_T0000999;gene_name=RCC2P1;ID=HG00140_ch_T0000999;Name=RCC2P1
HG00140_chrY	CAT	exon	12970174	12971648	.	-	.	source_transcript=ENST00000452257.1;source_transcript_name=RCC2P1-201;source_gene=ENSG00000234385.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234385.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000452257.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452257.1;transcript_score=199.864;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RCC2P1;alternative_source_transcripts=ENST00000452257.1,ENST00000452257.1;transcript_id=HG00140_ch_T0000999;gene_id=HG00140_ch_G0000323;Parent=HG00140_ch_T0000999;transcript_name=HG00140_ch_T0000999;gene_name=RCC2P1;ID=exon:HG00140_ch_T0000999:0;Name=RCC2P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	13111639	13112872	.	-	.	source_gene_common_name=ASS1P6;source_gene=ENSG00000215583.3;alternative_source_transcripts=ENST00000421118.1,ENST00000421118.1;gene_id=HG00140_ch_G0000324;gene_biotype=processed_pseudogene;gene_name=ASS1P6;gene_sources=liftoff;ID=HG00140_ch_G0000324;Name=ASS1P6
HG00140_chrY	CAT	transcript	13111639	13112872	1000	-	.	source_transcript=ENST00000421118.1;source_transcript_name=ASS1P6-201;source_gene=ENSG00000215583.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000215583.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000421118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421118.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASS1P6;alternative_source_transcripts=ENST00000421118.1,ENST00000421118.1;transcript_id=HG00140_ch_T0001000;gene_id=HG00140_ch_G0000324;Parent=HG00140_ch_G0000324;transcript_name=HG00140_ch_T0001000;gene_name=ASS1P6;ID=HG00140_ch_T0001000;Name=ASS1P6
HG00140_chrY	CAT	exon	13111639	13112872	.	-	.	source_transcript=ENST00000421118.1;source_transcript_name=ASS1P6-201;source_gene=ENSG00000215583.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000215583.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000421118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421118.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASS1P6;alternative_source_transcripts=ENST00000421118.1,ENST00000421118.1;transcript_id=HG00140_ch_T0001000;gene_id=HG00140_ch_G0000324;Parent=HG00140_ch_T0001000;transcript_name=HG00140_ch_T0001000;gene_name=ASS1P6;ID=exon:HG00140_ch_T0001000:0;Name=ASS1P6;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	13146338	13176556	.	+	.	source_gene_common_name=MXRA5Y;source_gene=ENSG00000235649.2;alternative_source_transcripts=ENST00000420610.1,ENST00000420610.1;gene_id=HG00140_ch_G0000325;gene_biotype=unprocessed_pseudogene;gene_name=MXRA5Y;gene_sources=liftoff;ID=HG00140_ch_G0000325;Name=MXRA5Y
HG00140_chrY	CAT	transcript	13146338	13176556	1000	+	.	source_transcript=ENST00000420610.1;source_transcript_name=MXRA5Y-201;source_gene=ENSG00000235649.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235649.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420610.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MXRA5Y;alternative_source_transcripts=ENST00000420610.1,ENST00000420610.1;transcript_id=HG00140_ch_T0001001;gene_id=HG00140_ch_G0000325;Parent=HG00140_ch_G0000325;transcript_name=HG00140_ch_T0001001;gene_name=MXRA5Y;ID=HG00140_ch_T0001001;Name=MXRA5Y
HG00140_chrY	CAT	exon	13146338	13146529	.	+	.	source_transcript=ENST00000420610.1;source_transcript_name=MXRA5Y-201;source_gene=ENSG00000235649.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235649.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420610.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MXRA5Y;alternative_source_transcripts=ENST00000420610.1,ENST00000420610.1;transcript_id=HG00140_ch_T0001001;gene_id=HG00140_ch_G0000325;Parent=HG00140_ch_T0001001;transcript_name=HG00140_ch_T0001001;gene_name=MXRA5Y;ID=exon:HG00140_ch_T0001001:0;Name=MXRA5Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13146530	13157219	.	+	.	source_transcript=ENST00000420610.1;source_transcript_name=MXRA5Y-201;source_gene=ENSG00000235649.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235649.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420610.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MXRA5Y;alternative_source_transcripts=ENST00000420610.1,ENST00000420610.1;transcript_id=HG00140_ch_T0001001;gene_id=HG00140_ch_G0000325;Parent=HG00140_ch_T0001001;transcript_name=HG00140_ch_T0001001;gene_name=MXRA5Y;ID=intron:HG00140_ch_T0001001:0;Name=MXRA5Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13157220	13162177	.	+	.	source_transcript=ENST00000420610.1;source_transcript_name=MXRA5Y-201;source_gene=ENSG00000235649.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235649.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420610.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MXRA5Y;alternative_source_transcripts=ENST00000420610.1,ENST00000420610.1;transcript_id=HG00140_ch_T0001001;gene_id=HG00140_ch_G0000325;Parent=HG00140_ch_T0001001;transcript_name=HG00140_ch_T0001001;gene_name=MXRA5Y;ID=exon:HG00140_ch_T0001001:1;Name=MXRA5Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13162178	13168050	.	+	.	source_transcript=ENST00000420610.1;source_transcript_name=MXRA5Y-201;source_gene=ENSG00000235649.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235649.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420610.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MXRA5Y;alternative_source_transcripts=ENST00000420610.1,ENST00000420610.1;transcript_id=HG00140_ch_T0001001;gene_id=HG00140_ch_G0000325;Parent=HG00140_ch_T0001001;transcript_name=HG00140_ch_T0001001;gene_name=MXRA5Y;ID=intron:HG00140_ch_T0001001:1;Name=MXRA5Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13168051	13169036	.	+	.	source_transcript=ENST00000420610.1;source_transcript_name=MXRA5Y-201;source_gene=ENSG00000235649.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235649.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420610.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MXRA5Y;alternative_source_transcripts=ENST00000420610.1,ENST00000420610.1;transcript_id=HG00140_ch_T0001001;gene_id=HG00140_ch_G0000325;Parent=HG00140_ch_T0001001;transcript_name=HG00140_ch_T0001001;gene_name=MXRA5Y;ID=exon:HG00140_ch_T0001001:2;Name=MXRA5Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13169037	13174650	.	+	.	source_transcript=ENST00000420610.1;source_transcript_name=MXRA5Y-201;source_gene=ENSG00000235649.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235649.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420610.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MXRA5Y;alternative_source_transcripts=ENST00000420610.1,ENST00000420610.1;transcript_id=HG00140_ch_T0001001;gene_id=HG00140_ch_G0000325;Parent=HG00140_ch_T0001001;transcript_name=HG00140_ch_T0001001;gene_name=MXRA5Y;ID=intron:HG00140_ch_T0001001:2;Name=MXRA5Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13174651	13176556	.	+	.	source_transcript=ENST00000420610.1;source_transcript_name=MXRA5Y-201;source_gene=ENSG00000235649.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235649.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420610.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MXRA5Y;alternative_source_transcripts=ENST00000420610.1,ENST00000420610.1;transcript_id=HG00140_ch_T0001001;gene_id=HG00140_ch_G0000325;Parent=HG00140_ch_T0001001;transcript_name=HG00140_ch_T0001001;gene_name=MXRA5Y;ID=exon:HG00140_ch_T0001001:3;Name=MXRA5Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	13277681	13621542	.	-	.	source_gene_common_name=ENSG00000291034;source_gene=ENSG00000291034.2;gene_id=HG00140_ch_G0000326;gene_biotype=lncRNA;gene_name=ENSG00000291034;gene_sources=liftoff;ID=HG00140_ch_G0000326;Name=ENSG00000291034
HG00140_chrY	CAT	transcript	13277681	13611175	1000	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001002;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_G0000326;transcript_name=HG00140_ch_T0001002;gene_name=ENSG00000291034;ID=HG00140_ch_T0001002;Name=ENSG00000291034
HG00140_chrY	CAT	exon	13277681	13278890	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001002;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001002;transcript_name=HG00140_ch_T0001002;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001002:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13278891	13300450	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001002;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001002;transcript_name=HG00140_ch_T0001002;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001002:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13300451	13300551	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001002;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001002;transcript_name=HG00140_ch_T0001002;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001002:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13300552	13304800	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001002;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001002;transcript_name=HG00140_ch_T0001002;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001002:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13304801	13304914	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001002;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001002;transcript_name=HG00140_ch_T0001002;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001002:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13304915	13392588	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001002;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001002;transcript_name=HG00140_ch_T0001002;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001002:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13392589	13392713	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001002;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001002;transcript_name=HG00140_ch_T0001002;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001002:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13392714	13399752	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001002;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001002;transcript_name=HG00140_ch_T0001002;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001002:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13399753	13399851	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001002;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001002;transcript_name=HG00140_ch_T0001002;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001002:4;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13399852	13430957	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001002;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001002;transcript_name=HG00140_ch_T0001002;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001002:4;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13430958	13430995	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001002;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001002;transcript_name=HG00140_ch_T0001002;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001002:5;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13430996	13596180	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001002;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001002;transcript_name=HG00140_ch_T0001002;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001002:5;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13596181	13596297	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001002;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001002;transcript_name=HG00140_ch_T0001002;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001002:6;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13596298	13596592	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001002;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001002;transcript_name=HG00140_ch_T0001002;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001002:6;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13596593	13596734	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001002;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001002;transcript_name=HG00140_ch_T0001002;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001002:7;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13596735	13610112	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001002;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001002;transcript_name=HG00140_ch_T0001002;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001002:7;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13610113	13610251	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001002;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001002;transcript_name=HG00140_ch_T0001002;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001002:8;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13610252	13611123	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001002;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001002;transcript_name=HG00140_ch_T0001002;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001002:8;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13611124	13611175	.	-	.	source_transcript=ENST00000651802.1;source_transcript_name=ENST00000651802;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651802.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651802.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001002;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001002;transcript_name=HG00140_ch_T0001002;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001002:9;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	13395304	13611384	1000	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001003;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_G0000326;transcript_name=HG00140_ch_T0001003;gene_name=ENSG00000291034;ID=HG00140_ch_T0001003;Name=ENSG00000291034
HG00140_chrY	CAT	exon	13395304	13396171	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001003;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001003;transcript_name=HG00140_ch_T0001003;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001003:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13396172	13430957	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001003;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001003;transcript_name=HG00140_ch_T0001003;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001003:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13430958	13430995	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001003;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001003;transcript_name=HG00140_ch_T0001003;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001003:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13430996	13443572	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001003;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001003;transcript_name=HG00140_ch_T0001003;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001003:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13443573	13443694	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001003;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001003;transcript_name=HG00140_ch_T0001003;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001003:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13443695	13447468	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001003;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001003;transcript_name=HG00140_ch_T0001003;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001003:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13447469	13447618	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001003;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001003;transcript_name=HG00140_ch_T0001003;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001003:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13447619	13596592	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001003;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001003;transcript_name=HG00140_ch_T0001003;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001003:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13596593	13596734	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001003;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001003;transcript_name=HG00140_ch_T0001003;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001003:4;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13596735	13610112	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001003;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001003;transcript_name=HG00140_ch_T0001003;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001003:4;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13610113	13610251	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001003;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001003;transcript_name=HG00140_ch_T0001003;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001003:5;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13610252	13611346	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001003;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001003;transcript_name=HG00140_ch_T0001003;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001003:5;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13611347	13611384	.	-	.	source_transcript=ENST00000651835.1;source_transcript_name=ENST00000651835;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651835.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651835.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001003;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001003;transcript_name=HG00140_ch_T0001003;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001003:6;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	13515984	13611361	1000	-	.	source_transcript=ENST00000737326.1;source_transcript_name=ENST00000737326;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737326.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001008;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_G0000326;transcript_name=HG00140_ch_T0001008;gene_name=ENSG00000291034;ID=HG00140_ch_T0001008;Name=ENSG00000291034
HG00140_chrY	CAT	exon	13515984	13516267	.	-	.	source_transcript=ENST00000737326.1;source_transcript_name=ENST00000737326;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001008;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001008;transcript_name=HG00140_ch_T0001008;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001008:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13516268	13596592	.	-	.	source_transcript=ENST00000737326.1;source_transcript_name=ENST00000737326;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001008;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001008;transcript_name=HG00140_ch_T0001008;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001008:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13596593	13596734	.	-	.	source_transcript=ENST00000737326.1;source_transcript_name=ENST00000737326;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001008;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001008;transcript_name=HG00140_ch_T0001008;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001008:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13596735	13610112	.	-	.	source_transcript=ENST00000737326.1;source_transcript_name=ENST00000737326;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001008;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001008;transcript_name=HG00140_ch_T0001008;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001008:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13610113	13610251	.	-	.	source_transcript=ENST00000737326.1;source_transcript_name=ENST00000737326;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001008;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001008;transcript_name=HG00140_ch_T0001008;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001008:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13610252	13611236	.	-	.	source_transcript=ENST00000737326.1;source_transcript_name=ENST00000737326;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001008;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001008;transcript_name=HG00140_ch_T0001008;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001008:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13611237	13611361	.	-	.	source_transcript=ENST00000737326.1;source_transcript_name=ENST00000737326;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737326.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001008;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001008;transcript_name=HG00140_ch_T0001008;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001008:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	13515984	13611395	1000	-	.	source_transcript=ENST00000700898.2;source_transcript_name=ENST00000700898;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700898.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700898.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001009;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_G0000326;transcript_name=HG00140_ch_T0001009;gene_name=ENSG00000291034;ID=HG00140_ch_T0001009;Name=ENSG00000291034
HG00140_chrY	CAT	exon	13515984	13516267	.	-	.	source_transcript=ENST00000700898.2;source_transcript_name=ENST00000700898;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700898.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700898.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001009;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001009;transcript_name=HG00140_ch_T0001009;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001009:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13516268	13596592	.	-	.	source_transcript=ENST00000700898.2;source_transcript_name=ENST00000700898;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700898.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700898.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001009;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001009;transcript_name=HG00140_ch_T0001009;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001009:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13596593	13596734	.	-	.	source_transcript=ENST00000700898.2;source_transcript_name=ENST00000700898;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700898.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700898.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001009;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001009;transcript_name=HG00140_ch_T0001009;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001009:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13596735	13610112	.	-	.	source_transcript=ENST00000700898.2;source_transcript_name=ENST00000700898;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700898.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700898.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001009;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001009;transcript_name=HG00140_ch_T0001009;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001009:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13610113	13610251	.	-	.	source_transcript=ENST00000700898.2;source_transcript_name=ENST00000700898;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700898.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700898.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001009;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001009;transcript_name=HG00140_ch_T0001009;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001009:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13610252	13611346	.	-	.	source_transcript=ENST00000700898.2;source_transcript_name=ENST00000700898;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700898.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700898.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001009;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001009;transcript_name=HG00140_ch_T0001009;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001009:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13611347	13611395	.	-	.	source_transcript=ENST00000700898.2;source_transcript_name=ENST00000700898;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700898.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700898.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001009;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001009;transcript_name=HG00140_ch_T0001009;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001009:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	13515986	13611347	1000	-	.	source_transcript=ENST00000737327.1;source_transcript_name=ENST00000737327;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737327.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001010;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_G0000326;transcript_name=HG00140_ch_T0001010;gene_name=ENSG00000291034;ID=HG00140_ch_T0001010;Name=ENSG00000291034
HG00140_chrY	CAT	exon	13515986	13516267	.	-	.	source_transcript=ENST00000737327.1;source_transcript_name=ENST00000737327;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001010;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001010;transcript_name=HG00140_ch_T0001010;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001010:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13516268	13596180	.	-	.	source_transcript=ENST00000737327.1;source_transcript_name=ENST00000737327;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001010;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001010;transcript_name=HG00140_ch_T0001010;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001010:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13596181	13596297	.	-	.	source_transcript=ENST00000737327.1;source_transcript_name=ENST00000737327;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001010;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001010;transcript_name=HG00140_ch_T0001010;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001010:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13596298	13596592	.	-	.	source_transcript=ENST00000737327.1;source_transcript_name=ENST00000737327;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001010;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001010;transcript_name=HG00140_ch_T0001010;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001010:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13596593	13596734	.	-	.	source_transcript=ENST00000737327.1;source_transcript_name=ENST00000737327;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001010;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001010;transcript_name=HG00140_ch_T0001010;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001010:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13596735	13610112	.	-	.	source_transcript=ENST00000737327.1;source_transcript_name=ENST00000737327;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001010;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001010;transcript_name=HG00140_ch_T0001010;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001010:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13610113	13610251	.	-	.	source_transcript=ENST00000737327.1;source_transcript_name=ENST00000737327;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001010;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001010;transcript_name=HG00140_ch_T0001010;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001010:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13610252	13611236	.	-	.	source_transcript=ENST00000737327.1;source_transcript_name=ENST00000737327;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001010;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001010;transcript_name=HG00140_ch_T0001010;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001010:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13611237	13611347	.	-	.	source_transcript=ENST00000737327.1;source_transcript_name=ENST00000737327;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001010;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001010;transcript_name=HG00140_ch_T0001010;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001010:4;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	13529341	13611381	1000	-	.	source_transcript=ENST00000737328.1;source_transcript_name=ENST00000737328;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737328.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001014;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_G0000326;transcript_name=HG00140_ch_T0001014;gene_name=ENSG00000291034;ID=HG00140_ch_T0001014;Name=ENSG00000291034
HG00140_chrY	CAT	exon	13529341	13529548	.	-	.	source_transcript=ENST00000737328.1;source_transcript_name=ENST00000737328;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001014;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001014;transcript_name=HG00140_ch_T0001014;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001014:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13529549	13596592	.	-	.	source_transcript=ENST00000737328.1;source_transcript_name=ENST00000737328;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001014;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001014;transcript_name=HG00140_ch_T0001014;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001014:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13596593	13596734	.	-	.	source_transcript=ENST00000737328.1;source_transcript_name=ENST00000737328;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001014;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001014;transcript_name=HG00140_ch_T0001014;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001014:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13596735	13610112	.	-	.	source_transcript=ENST00000737328.1;source_transcript_name=ENST00000737328;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001014;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001014;transcript_name=HG00140_ch_T0001014;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001014:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13610113	13610251	.	-	.	source_transcript=ENST00000737328.1;source_transcript_name=ENST00000737328;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001014;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001014;transcript_name=HG00140_ch_T0001014;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001014:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13610252	13611346	.	-	.	source_transcript=ENST00000737328.1;source_transcript_name=ENST00000737328;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001014;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001014;transcript_name=HG00140_ch_T0001014;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001014:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13611347	13611381	.	-	.	source_transcript=ENST00000737328.1;source_transcript_name=ENST00000737328;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001014;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001014;transcript_name=HG00140_ch_T0001014;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001014:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	13544018	13611381	1000	-	.	source_transcript=ENST00000700901.1;source_transcript_name=ENST00000700901;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700901.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001018;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_G0000326;transcript_name=HG00140_ch_T0001018;gene_name=ENSG00000291034;ID=HG00140_ch_T0001018;Name=ENSG00000291034
HG00140_chrY	CAT	exon	13544018	13544377	.	-	.	source_transcript=ENST00000700901.1;source_transcript_name=ENST00000700901;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001018;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001018;transcript_name=HG00140_ch_T0001018;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001018:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13544378	13596592	.	-	.	source_transcript=ENST00000700901.1;source_transcript_name=ENST00000700901;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001018;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001018;transcript_name=HG00140_ch_T0001018;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001018:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13596593	13596734	.	-	.	source_transcript=ENST00000700901.1;source_transcript_name=ENST00000700901;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001018;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001018;transcript_name=HG00140_ch_T0001018;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001018:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13596735	13610112	.	-	.	source_transcript=ENST00000700901.1;source_transcript_name=ENST00000700901;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001018;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001018;transcript_name=HG00140_ch_T0001018;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001018:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13610113	13610251	.	-	.	source_transcript=ENST00000700901.1;source_transcript_name=ENST00000700901;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001018;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001018;transcript_name=HG00140_ch_T0001018;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001018:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13610252	13611346	.	-	.	source_transcript=ENST00000700901.1;source_transcript_name=ENST00000700901;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001018;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001018;transcript_name=HG00140_ch_T0001018;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001018:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13611347	13611381	.	-	.	source_transcript=ENST00000700901.1;source_transcript_name=ENST00000700901;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001018;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001018;transcript_name=HG00140_ch_T0001018;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001018:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	13544022	13610253	1000	-	.	source_transcript=ENST00000382966.5;source_transcript_name=ENST00000382966;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382966.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382966.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001019;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_G0000326;transcript_name=HG00140_ch_T0001019;gene_name=ENSG00000291034;ID=HG00140_ch_T0001019;Name=ENSG00000291034
HG00140_chrY	CAT	exon	13544022	13544377	.	-	.	source_transcript=ENST00000382966.5;source_transcript_name=ENST00000382966;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382966.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382966.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001019;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001019;transcript_name=HG00140_ch_T0001019;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001019:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13544378	13596592	.	-	.	source_transcript=ENST00000382966.5;source_transcript_name=ENST00000382966;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382966.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382966.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001019;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001019;transcript_name=HG00140_ch_T0001019;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001019:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13596593	13596734	.	-	.	source_transcript=ENST00000382966.5;source_transcript_name=ENST00000382966;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382966.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382966.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001019;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001019;transcript_name=HG00140_ch_T0001019;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001019:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13596735	13610112	.	-	.	source_transcript=ENST00000382966.5;source_transcript_name=ENST00000382966;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382966.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382966.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001019;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001019;transcript_name=HG00140_ch_T0001019;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001019:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13610113	13610253	.	-	.	source_transcript=ENST00000382966.5;source_transcript_name=ENST00000382966;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382966.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382966.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001019;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001019;transcript_name=HG00140_ch_T0001019;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001019:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	13568320	13611419	1000	-	.	source_transcript=ENST00000700889.2;source_transcript_name=ENST00000700889;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700889.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700889.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001020;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_G0000326;transcript_name=HG00140_ch_T0001020;gene_name=ENSG00000291034;ID=HG00140_ch_T0001020;Name=ENSG00000291034
HG00140_chrY	CAT	exon	13568320	13568548	.	-	.	source_transcript=ENST00000700889.2;source_transcript_name=ENST00000700889;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700889.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700889.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001020;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001020;transcript_name=HG00140_ch_T0001020;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001020:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13568549	13596592	.	-	.	source_transcript=ENST00000700889.2;source_transcript_name=ENST00000700889;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700889.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700889.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001020;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001020;transcript_name=HG00140_ch_T0001020;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001020:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13596593	13596734	.	-	.	source_transcript=ENST00000700889.2;source_transcript_name=ENST00000700889;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700889.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700889.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001020;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001020;transcript_name=HG00140_ch_T0001020;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001020:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13596735	13610112	.	-	.	source_transcript=ENST00000700889.2;source_transcript_name=ENST00000700889;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700889.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700889.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001020;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001020;transcript_name=HG00140_ch_T0001020;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001020:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13610113	13610251	.	-	.	source_transcript=ENST00000700889.2;source_transcript_name=ENST00000700889;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700889.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700889.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001020;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001020;transcript_name=HG00140_ch_T0001020;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001020:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13610252	13611346	.	-	.	source_transcript=ENST00000700889.2;source_transcript_name=ENST00000700889;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700889.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700889.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001020;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001020;transcript_name=HG00140_ch_T0001020;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001020:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13611347	13611419	.	-	.	source_transcript=ENST00000700889.2;source_transcript_name=ENST00000700889;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700889.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000700889.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001020;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001020;transcript_name=HG00140_ch_T0001020;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001020:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	13568320	13611126	1000	-	.	source_transcript=ENST00000737333.1;source_transcript_name=ENST00000737333;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737333.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001021;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_G0000326;transcript_name=HG00140_ch_T0001021;gene_name=ENSG00000291034;ID=HG00140_ch_T0001021;Name=ENSG00000291034
HG00140_chrY	CAT	exon	13568320	13568548	.	-	.	source_transcript=ENST00000737333.1;source_transcript_name=ENST00000737333;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001021;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001021;transcript_name=HG00140_ch_T0001021;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001021:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13568549	13596592	.	-	.	source_transcript=ENST00000737333.1;source_transcript_name=ENST00000737333;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001021;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001021;transcript_name=HG00140_ch_T0001021;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001021:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13596593	13596734	.	-	.	source_transcript=ENST00000737333.1;source_transcript_name=ENST00000737333;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001021;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001021;transcript_name=HG00140_ch_T0001021;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001021:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13596735	13610112	.	-	.	source_transcript=ENST00000737333.1;source_transcript_name=ENST00000737333;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001021;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001021;transcript_name=HG00140_ch_T0001021;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001021:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13610113	13610251	.	-	.	source_transcript=ENST00000737333.1;source_transcript_name=ENST00000737333;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001021;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001021;transcript_name=HG00140_ch_T0001021;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001021:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13610252	13611007	.	-	.	source_transcript=ENST00000737333.1;source_transcript_name=ENST00000737333;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001021;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001021;transcript_name=HG00140_ch_T0001021;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001021:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13611008	13611126	.	-	.	source_transcript=ENST00000737333.1;source_transcript_name=ENST00000737333;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001021;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001021;transcript_name=HG00140_ch_T0001021;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001021:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	13568320	13611359	1000	-	.	source_transcript=ENST00000737332.1;source_transcript_name=ENST00000737332;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737332.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001022;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_G0000326;transcript_name=HG00140_ch_T0001022;gene_name=ENSG00000291034;ID=HG00140_ch_T0001022;Name=ENSG00000291034
HG00140_chrY	CAT	exon	13568320	13568548	.	-	.	source_transcript=ENST00000737332.1;source_transcript_name=ENST00000737332;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001022;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001022;transcript_name=HG00140_ch_T0001022;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001022:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13568549	13571979	.	-	.	source_transcript=ENST00000737332.1;source_transcript_name=ENST00000737332;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001022;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001022;transcript_name=HG00140_ch_T0001022;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001022:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13571980	13572128	.	-	.	source_transcript=ENST00000737332.1;source_transcript_name=ENST00000737332;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001022;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001022;transcript_name=HG00140_ch_T0001022;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001022:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13572129	13596592	.	-	.	source_transcript=ENST00000737332.1;source_transcript_name=ENST00000737332;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001022;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001022;transcript_name=HG00140_ch_T0001022;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001022:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13596593	13596734	.	-	.	source_transcript=ENST00000737332.1;source_transcript_name=ENST00000737332;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001022;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001022;transcript_name=HG00140_ch_T0001022;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001022:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13596735	13610112	.	-	.	source_transcript=ENST00000737332.1;source_transcript_name=ENST00000737332;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001022;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001022;transcript_name=HG00140_ch_T0001022;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001022:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13610113	13610251	.	-	.	source_transcript=ENST00000737332.1;source_transcript_name=ENST00000737332;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001022;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001022;transcript_name=HG00140_ch_T0001022;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001022:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13610252	13611236	.	-	.	source_transcript=ENST00000737332.1;source_transcript_name=ENST00000737332;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001022;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001022;transcript_name=HG00140_ch_T0001022;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001022:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13611237	13611359	.	-	.	source_transcript=ENST00000737332.1;source_transcript_name=ENST00000737332;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001022;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001022;transcript_name=HG00140_ch_T0001022;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001022:4;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	13568320	13611356	1000	-	.	source_transcript=ENST00000689264.2;source_transcript_name=ENST00000689264;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000689264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000689264.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001023;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_G0000326;transcript_name=HG00140_ch_T0001023;gene_name=ENSG00000291034;ID=HG00140_ch_T0001023;Name=ENSG00000291034
HG00140_chrY	CAT	exon	13568320	13568548	.	-	.	source_transcript=ENST00000689264.2;source_transcript_name=ENST00000689264;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000689264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000689264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001023;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001023;transcript_name=HG00140_ch_T0001023;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001023:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13568549	13596592	.	-	.	source_transcript=ENST00000689264.2;source_transcript_name=ENST00000689264;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000689264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000689264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001023;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001023;transcript_name=HG00140_ch_T0001023;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001023:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13596593	13596734	.	-	.	source_transcript=ENST00000689264.2;source_transcript_name=ENST00000689264;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000689264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000689264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001023;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001023;transcript_name=HG00140_ch_T0001023;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001023:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13596735	13610112	.	-	.	source_transcript=ENST00000689264.2;source_transcript_name=ENST00000689264;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000689264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000689264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001023;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001023;transcript_name=HG00140_ch_T0001023;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001023:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13610113	13610251	.	-	.	source_transcript=ENST00000689264.2;source_transcript_name=ENST00000689264;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000689264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000689264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001023;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001023;transcript_name=HG00140_ch_T0001023;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001023:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13610252	13611236	.	-	.	source_transcript=ENST00000689264.2;source_transcript_name=ENST00000689264;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000689264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000689264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001023;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001023;transcript_name=HG00140_ch_T0001023;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001023:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13611237	13611356	.	-	.	source_transcript=ENST00000689264.2;source_transcript_name=ENST00000689264;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000689264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000689264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001023;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001023;transcript_name=HG00140_ch_T0001023;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001023:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	13568331	13611428	1000	-	.	source_transcript=ENST00000737330.1;source_transcript_name=ENST00000737330;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737330.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001024;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_G0000326;transcript_name=HG00140_ch_T0001024;gene_name=ENSG00000291034;ID=HG00140_ch_T0001024;Name=ENSG00000291034
HG00140_chrY	CAT	exon	13568331	13568548	.	-	.	source_transcript=ENST00000737330.1;source_transcript_name=ENST00000737330;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001024;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001024;transcript_name=HG00140_ch_T0001024;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001024:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13568549	13571979	.	-	.	source_transcript=ENST00000737330.1;source_transcript_name=ENST00000737330;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001024;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001024;transcript_name=HG00140_ch_T0001024;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001024:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13571980	13572128	.	-	.	source_transcript=ENST00000737330.1;source_transcript_name=ENST00000737330;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001024;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001024;transcript_name=HG00140_ch_T0001024;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001024:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13572129	13596592	.	-	.	source_transcript=ENST00000737330.1;source_transcript_name=ENST00000737330;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001024;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001024;transcript_name=HG00140_ch_T0001024;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001024:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13596593	13596734	.	-	.	source_transcript=ENST00000737330.1;source_transcript_name=ENST00000737330;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001024;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001024;transcript_name=HG00140_ch_T0001024;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001024:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13596735	13610112	.	-	.	source_transcript=ENST00000737330.1;source_transcript_name=ENST00000737330;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001024;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001024;transcript_name=HG00140_ch_T0001024;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001024:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13610113	13610251	.	-	.	source_transcript=ENST00000737330.1;source_transcript_name=ENST00000737330;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001024;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001024;transcript_name=HG00140_ch_T0001024;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001024:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13610252	13611346	.	-	.	source_transcript=ENST00000737330.1;source_transcript_name=ENST00000737330;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001024;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001024;transcript_name=HG00140_ch_T0001024;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001024:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13611347	13611428	.	-	.	source_transcript=ENST00000737330.1;source_transcript_name=ENST00000737330;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001024;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001024;transcript_name=HG00140_ch_T0001024;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001024:4;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	13568333	13611374	1000	-	.	source_transcript=ENST00000737331.1;source_transcript_name=ENST00000737331;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737331.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001025;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_G0000326;transcript_name=HG00140_ch_T0001025;gene_name=ENSG00000291034;ID=HG00140_ch_T0001025;Name=ENSG00000291034
HG00140_chrY	CAT	exon	13568333	13568548	.	-	.	source_transcript=ENST00000737331.1;source_transcript_name=ENST00000737331;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001025;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001025;transcript_name=HG00140_ch_T0001025;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001025:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13568549	13588480	.	-	.	source_transcript=ENST00000737331.1;source_transcript_name=ENST00000737331;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001025;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001025;transcript_name=HG00140_ch_T0001025;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001025:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13588481	13588618	.	-	.	source_transcript=ENST00000737331.1;source_transcript_name=ENST00000737331;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001025;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001025;transcript_name=HG00140_ch_T0001025;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001025:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13588619	13596592	.	-	.	source_transcript=ENST00000737331.1;source_transcript_name=ENST00000737331;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001025;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001025;transcript_name=HG00140_ch_T0001025;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001025:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13596593	13596734	.	-	.	source_transcript=ENST00000737331.1;source_transcript_name=ENST00000737331;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001025;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001025;transcript_name=HG00140_ch_T0001025;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001025:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13596735	13610112	.	-	.	source_transcript=ENST00000737331.1;source_transcript_name=ENST00000737331;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001025;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001025;transcript_name=HG00140_ch_T0001025;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001025:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13610113	13610251	.	-	.	source_transcript=ENST00000737331.1;source_transcript_name=ENST00000737331;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001025;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001025;transcript_name=HG00140_ch_T0001025;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001025:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13610252	13611346	.	-	.	source_transcript=ENST00000737331.1;source_transcript_name=ENST00000737331;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001025;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001025;transcript_name=HG00140_ch_T0001025;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001025:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13611347	13611374	.	-	.	source_transcript=ENST00000737331.1;source_transcript_name=ENST00000737331;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001025;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001025;transcript_name=HG00140_ch_T0001025;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001025:4;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	13568335	13610722	1000	-	.	source_transcript=ENST00000737335.1;source_transcript_name=ENST00000737335;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737335.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001026;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_G0000326;transcript_name=HG00140_ch_T0001026;gene_name=ENSG00000291034;ID=HG00140_ch_T0001026;Name=ENSG00000291034
HG00140_chrY	CAT	exon	13568335	13568548	.	-	.	source_transcript=ENST00000737335.1;source_transcript_name=ENST00000737335;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001026;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001026;transcript_name=HG00140_ch_T0001026;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001026:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13568549	13596592	.	-	.	source_transcript=ENST00000737335.1;source_transcript_name=ENST00000737335;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001026;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001026;transcript_name=HG00140_ch_T0001026;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001026:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13596593	13596734	.	-	.	source_transcript=ENST00000737335.1;source_transcript_name=ENST00000737335;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001026;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001026;transcript_name=HG00140_ch_T0001026;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001026:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13596735	13610112	.	-	.	source_transcript=ENST00000737335.1;source_transcript_name=ENST00000737335;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001026;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001026;transcript_name=HG00140_ch_T0001026;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001026:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13610113	13610251	.	-	.	source_transcript=ENST00000737335.1;source_transcript_name=ENST00000737335;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001026;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001026;transcript_name=HG00140_ch_T0001026;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001026:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13610252	13610689	.	-	.	source_transcript=ENST00000737335.1;source_transcript_name=ENST00000737335;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001026;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001026;transcript_name=HG00140_ch_T0001026;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001026:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13610690	13610722	.	-	.	source_transcript=ENST00000737335.1;source_transcript_name=ENST00000737335;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737335.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737335.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001026;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001026;transcript_name=HG00140_ch_T0001026;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001026:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	13568336	13610251	1000	-	.	source_transcript=ENST00000737336.1;source_transcript_name=ENST00000737336;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737336.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001027;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_G0000326;transcript_name=HG00140_ch_T0001027;gene_name=ENSG00000291034;ID=HG00140_ch_T0001027;Name=ENSG00000291034
HG00140_chrY	CAT	exon	13568336	13568548	.	-	.	source_transcript=ENST00000737336.1;source_transcript_name=ENST00000737336;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001027;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001027;transcript_name=HG00140_ch_T0001027;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001027:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13568549	13571979	.	-	.	source_transcript=ENST00000737336.1;source_transcript_name=ENST00000737336;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001027;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001027;transcript_name=HG00140_ch_T0001027;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001027:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13571980	13572128	.	-	.	source_transcript=ENST00000737336.1;source_transcript_name=ENST00000737336;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001027;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001027;transcript_name=HG00140_ch_T0001027;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001027:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13572129	13596180	.	-	.	source_transcript=ENST00000737336.1;source_transcript_name=ENST00000737336;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001027;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001027;transcript_name=HG00140_ch_T0001027;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001027:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13596181	13596297	.	-	.	source_transcript=ENST00000737336.1;source_transcript_name=ENST00000737336;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001027;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001027;transcript_name=HG00140_ch_T0001027;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001027:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13596298	13596592	.	-	.	source_transcript=ENST00000737336.1;source_transcript_name=ENST00000737336;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001027;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001027;transcript_name=HG00140_ch_T0001027;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001027:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13596593	13596734	.	-	.	source_transcript=ENST00000737336.1;source_transcript_name=ENST00000737336;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001027;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001027;transcript_name=HG00140_ch_T0001027;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001027:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13596735	13610112	.	-	.	source_transcript=ENST00000737336.1;source_transcript_name=ENST00000737336;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001027;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001027;transcript_name=HG00140_ch_T0001027;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001027:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13610113	13610251	.	-	.	source_transcript=ENST00000737336.1;source_transcript_name=ENST00000737336;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737336.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001027;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001027;transcript_name=HG00140_ch_T0001027;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001027:4;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	13568336	13610920	1000	-	.	source_transcript=ENST00000737334.1;source_transcript_name=ENST00000737334;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737334.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001028;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_G0000326;transcript_name=HG00140_ch_T0001028;gene_name=ENSG00000291034;ID=HG00140_ch_T0001028;Name=ENSG00000291034
HG00140_chrY	CAT	exon	13568336	13568548	.	-	.	source_transcript=ENST00000737334.1;source_transcript_name=ENST00000737334;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001028;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001028;transcript_name=HG00140_ch_T0001028;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001028:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13568549	13596592	.	-	.	source_transcript=ENST00000737334.1;source_transcript_name=ENST00000737334;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001028;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001028;transcript_name=HG00140_ch_T0001028;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001028:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13596593	13596734	.	-	.	source_transcript=ENST00000737334.1;source_transcript_name=ENST00000737334;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001028;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001028;transcript_name=HG00140_ch_T0001028;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001028:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13596735	13610112	.	-	.	source_transcript=ENST00000737334.1;source_transcript_name=ENST00000737334;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001028;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001028;transcript_name=HG00140_ch_T0001028;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001028:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13610113	13610251	.	-	.	source_transcript=ENST00000737334.1;source_transcript_name=ENST00000737334;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001028;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001028;transcript_name=HG00140_ch_T0001028;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001028:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13610252	13610864	.	-	.	source_transcript=ENST00000737334.1;source_transcript_name=ENST00000737334;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001028;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001028;transcript_name=HG00140_ch_T0001028;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001028:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13610865	13610920	.	-	.	source_transcript=ENST00000737334.1;source_transcript_name=ENST00000737334;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001028;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001028;transcript_name=HG00140_ch_T0001028;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001028:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	13568990	13621465	1000	-	.	source_transcript=ENST00000737329.1;source_transcript_name=ENST00000737329;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737329.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001029;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_G0000326;transcript_name=HG00140_ch_T0001029;gene_name=ENSG00000291034;ID=HG00140_ch_T0001029;Name=ENSG00000291034
HG00140_chrY	CAT	exon	13568990	13569643	.	-	.	source_transcript=ENST00000737329.1;source_transcript_name=ENST00000737329;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001029;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001029;transcript_name=HG00140_ch_T0001029;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001029:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13569644	13596592	.	-	.	source_transcript=ENST00000737329.1;source_transcript_name=ENST00000737329;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001029;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001029;transcript_name=HG00140_ch_T0001029;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001029:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13596593	13596734	.	-	.	source_transcript=ENST00000737329.1;source_transcript_name=ENST00000737329;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001029;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001029;transcript_name=HG00140_ch_T0001029;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001029:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13596735	13596989	.	-	.	source_transcript=ENST00000737329.1;source_transcript_name=ENST00000737329;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001029;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001029;transcript_name=HG00140_ch_T0001029;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001029:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13596990	13597106	.	-	.	source_transcript=ENST00000737329.1;source_transcript_name=ENST00000737329;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001029;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001029;transcript_name=HG00140_ch_T0001029;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001029:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13597107	13621437	.	-	.	source_transcript=ENST00000737329.1;source_transcript_name=ENST00000737329;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001029;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001029;transcript_name=HG00140_ch_T0001029;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001029:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13621438	13621465	.	-	.	source_transcript=ENST00000737329.1;source_transcript_name=ENST00000737329;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001029;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001029;transcript_name=HG00140_ch_T0001029;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001029:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	13572990	13608091	1000	-	.	source_transcript=ENST00000493160.5;source_transcript_name=ENST00000493160;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000493160.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000493160.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001030;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_G0000326;transcript_name=HG00140_ch_T0001030;gene_name=ENSG00000291034;ID=HG00140_ch_T0001030;Name=ENSG00000291034
HG00140_chrY	CAT	exon	13572990	13573131	.	-	.	source_transcript=ENST00000493160.5;source_transcript_name=ENST00000493160;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000493160.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000493160.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001030;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001030;transcript_name=HG00140_ch_T0001030;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001030:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13573132	13588480	.	-	.	source_transcript=ENST00000493160.5;source_transcript_name=ENST00000493160;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000493160.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000493160.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001030;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001030;transcript_name=HG00140_ch_T0001030;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001030:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13588481	13588618	.	-	.	source_transcript=ENST00000493160.5;source_transcript_name=ENST00000493160;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000493160.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000493160.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001030;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001030;transcript_name=HG00140_ch_T0001030;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001030:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13588619	13596592	.	-	.	source_transcript=ENST00000493160.5;source_transcript_name=ENST00000493160;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000493160.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000493160.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001030;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001030;transcript_name=HG00140_ch_T0001030;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001030:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13596593	13596734	.	-	.	source_transcript=ENST00000493160.5;source_transcript_name=ENST00000493160;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000493160.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000493160.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001030;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001030;transcript_name=HG00140_ch_T0001030;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001030:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13596735	13596989	.	-	.	source_transcript=ENST00000493160.5;source_transcript_name=ENST00000493160;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000493160.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000493160.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001030;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001030;transcript_name=HG00140_ch_T0001030;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001030:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13596990	13597106	.	-	.	source_transcript=ENST00000493160.5;source_transcript_name=ENST00000493160;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000493160.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000493160.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001030;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001030;transcript_name=HG00140_ch_T0001030;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001030:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13597107	13607686	.	-	.	source_transcript=ENST00000493160.5;source_transcript_name=ENST00000493160;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000493160.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000493160.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001030;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001030;transcript_name=HG00140_ch_T0001030;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001030:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13607687	13608091	.	-	.	source_transcript=ENST00000493160.5;source_transcript_name=ENST00000493160;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000493160.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000493160.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001030;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001030;transcript_name=HG00140_ch_T0001030;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001030:4;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	13591789	13611381	1000	-	.	source_transcript=ENST00000737337.1;source_transcript_name=ENST00000737337;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737337.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001031;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_G0000326;transcript_name=HG00140_ch_T0001031;gene_name=ENSG00000291034;ID=HG00140_ch_T0001031;Name=ENSG00000291034
HG00140_chrY	CAT	exon	13591789	13592391	.	-	.	source_transcript=ENST00000737337.1;source_transcript_name=ENST00000737337;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001031;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001031;transcript_name=HG00140_ch_T0001031;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001031:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13592392	13596592	.	-	.	source_transcript=ENST00000737337.1;source_transcript_name=ENST00000737337;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001031;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001031;transcript_name=HG00140_ch_T0001031;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001031:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13596593	13596734	.	-	.	source_transcript=ENST00000737337.1;source_transcript_name=ENST00000737337;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001031;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001031;transcript_name=HG00140_ch_T0001031;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001031:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13596735	13610112	.	-	.	source_transcript=ENST00000737337.1;source_transcript_name=ENST00000737337;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001031;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001031;transcript_name=HG00140_ch_T0001031;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001031:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13610113	13610251	.	-	.	source_transcript=ENST00000737337.1;source_transcript_name=ENST00000737337;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001031;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001031;transcript_name=HG00140_ch_T0001031;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001031:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13610252	13611346	.	-	.	source_transcript=ENST00000737337.1;source_transcript_name=ENST00000737337;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001031;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001031;transcript_name=HG00140_ch_T0001031;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001031:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13611347	13611381	.	-	.	source_transcript=ENST00000737337.1;source_transcript_name=ENST00000737337;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737337.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737337.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001031;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001031;transcript_name=HG00140_ch_T0001031;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001031:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	13591792	13611051	1000	-	.	source_transcript=ENST00000737338.1;source_transcript_name=ENST00000737338;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737338.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001032;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_G0000326;transcript_name=HG00140_ch_T0001032;gene_name=ENSG00000291034;ID=HG00140_ch_T0001032;Name=ENSG00000291034
HG00140_chrY	CAT	exon	13591792	13592391	.	-	.	source_transcript=ENST00000737338.1;source_transcript_name=ENST00000737338;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737338.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001032;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001032;transcript_name=HG00140_ch_T0001032;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001032:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13592392	13596592	.	-	.	source_transcript=ENST00000737338.1;source_transcript_name=ENST00000737338;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737338.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001032;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001032;transcript_name=HG00140_ch_T0001032;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001032:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13596593	13596734	.	-	.	source_transcript=ENST00000737338.1;source_transcript_name=ENST00000737338;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737338.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001032;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001032;transcript_name=HG00140_ch_T0001032;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001032:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13596735	13610112	.	-	.	source_transcript=ENST00000737338.1;source_transcript_name=ENST00000737338;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737338.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001032;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001032;transcript_name=HG00140_ch_T0001032;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001032:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13610113	13610251	.	-	.	source_transcript=ENST00000737338.1;source_transcript_name=ENST00000737338;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737338.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001032;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001032;transcript_name=HG00140_ch_T0001032;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001032:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13610252	13611007	.	-	.	source_transcript=ENST00000737338.1;source_transcript_name=ENST00000737338;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737338.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001032;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001032;transcript_name=HG00140_ch_T0001032;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001032:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13611008	13611051	.	-	.	source_transcript=ENST00000737338.1;source_transcript_name=ENST00000737338;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737338.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001032;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001032;transcript_name=HG00140_ch_T0001032;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001032:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	13592052	13610253	1000	-	.	source_transcript=ENST00000357871.6;source_transcript_name=ENST00000357871;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000357871.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000357871.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001033;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_G0000326;transcript_name=HG00140_ch_T0001033;gene_name=ENSG00000291034;ID=HG00140_ch_T0001033;Name=ENSG00000291034
HG00140_chrY	CAT	exon	13592052	13592391	.	-	.	source_transcript=ENST00000357871.6;source_transcript_name=ENST00000357871;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000357871.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000357871.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001033;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001033;transcript_name=HG00140_ch_T0001033;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001033:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13592392	13596592	.	-	.	source_transcript=ENST00000357871.6;source_transcript_name=ENST00000357871;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000357871.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000357871.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001033;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001033;transcript_name=HG00140_ch_T0001033;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001033:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13596593	13596734	.	-	.	source_transcript=ENST00000357871.6;source_transcript_name=ENST00000357871;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000357871.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000357871.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001033;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001033;transcript_name=HG00140_ch_T0001033;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001033:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13596735	13610112	.	-	.	source_transcript=ENST00000357871.6;source_transcript_name=ENST00000357871;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000357871.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000357871.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001033;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001033;transcript_name=HG00140_ch_T0001033;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001033:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13610113	13610253	.	-	.	source_transcript=ENST00000357871.6;source_transcript_name=ENST00000357871;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000357871.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000357871.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001033;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001033;transcript_name=HG00140_ch_T0001033;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001033:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	13595915	13611171	1000	-	.	source_transcript=ENST00000737339.1;source_transcript_name=ENST00000737339;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737339.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737339.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001034;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_G0000326;transcript_name=HG00140_ch_T0001034;gene_name=ENSG00000291034;ID=HG00140_ch_T0001034;Name=ENSG00000291034
HG00140_chrY	CAT	exon	13595915	13596297	.	-	.	source_transcript=ENST00000737339.1;source_transcript_name=ENST00000737339;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737339.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737339.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001034;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001034;transcript_name=HG00140_ch_T0001034;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001034:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13596298	13596592	.	-	.	source_transcript=ENST00000737339.1;source_transcript_name=ENST00000737339;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737339.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737339.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001034;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001034;transcript_name=HG00140_ch_T0001034;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001034:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13596593	13596734	.	-	.	source_transcript=ENST00000737339.1;source_transcript_name=ENST00000737339;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737339.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737339.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001034;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001034;transcript_name=HG00140_ch_T0001034;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001034:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13596735	13610112	.	-	.	source_transcript=ENST00000737339.1;source_transcript_name=ENST00000737339;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737339.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737339.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001034;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001034;transcript_name=HG00140_ch_T0001034;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001034:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13610113	13610251	.	-	.	source_transcript=ENST00000737339.1;source_transcript_name=ENST00000737339;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737339.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737339.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001034;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001034;transcript_name=HG00140_ch_T0001034;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001034:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13610252	13611123	.	-	.	source_transcript=ENST00000737339.1;source_transcript_name=ENST00000737339;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737339.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737339.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001034;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001034;transcript_name=HG00140_ch_T0001034;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001034:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13611124	13611171	.	-	.	source_transcript=ENST00000737339.1;source_transcript_name=ENST00000737339;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737339.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737339.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001034;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001034;transcript_name=HG00140_ch_T0001034;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001034:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	13595920	13610169	1000	-	.	source_transcript=ENST00000382963.5;source_transcript_name=ENST00000382963;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382963.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382963.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001035;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_G0000326;transcript_name=HG00140_ch_T0001035;gene_name=ENSG00000291034;ID=HG00140_ch_T0001035;Name=ENSG00000291034
HG00140_chrY	CAT	exon	13595920	13596297	.	-	.	source_transcript=ENST00000382963.5;source_transcript_name=ENST00000382963;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382963.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382963.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001035;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001035;transcript_name=HG00140_ch_T0001035;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001035:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13596298	13596592	.	-	.	source_transcript=ENST00000382963.5;source_transcript_name=ENST00000382963;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382963.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382963.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001035;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001035;transcript_name=HG00140_ch_T0001035;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001035:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13596593	13596734	.	-	.	source_transcript=ENST00000382963.5;source_transcript_name=ENST00000382963;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382963.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382963.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001035;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001035;transcript_name=HG00140_ch_T0001035;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001035:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13596735	13596989	.	-	.	source_transcript=ENST00000382963.5;source_transcript_name=ENST00000382963;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382963.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382963.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001035;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001035;transcript_name=HG00140_ch_T0001035;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001035:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13596990	13597106	.	-	.	source_transcript=ENST00000382963.5;source_transcript_name=ENST00000382963;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382963.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382963.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001035;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001035;transcript_name=HG00140_ch_T0001035;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001035:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13597107	13610112	.	-	.	source_transcript=ENST00000382963.5;source_transcript_name=ENST00000382963;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382963.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382963.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001035;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001035;transcript_name=HG00140_ch_T0001035;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001035:2;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13610113	13610169	.	-	.	source_transcript=ENST00000382963.5;source_transcript_name=ENST00000382963;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382963.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382963.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001035;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001035;transcript_name=HG00140_ch_T0001035;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001035:3;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	13615211	13621542	1000	-	.	source_transcript=ENST00000737340.1;source_transcript_name=ENST00000737340;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737340.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001037;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_G0000326;transcript_name=HG00140_ch_T0001037;gene_name=ENSG00000291034;ID=HG00140_ch_T0001037;Name=ENSG00000291034
HG00140_chrY	CAT	exon	13615211	13615617	.	-	.	source_transcript=ENST00000737340.1;source_transcript_name=ENST00000737340;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737340.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001037;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001037;transcript_name=HG00140_ch_T0001037;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001037:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13615618	13621437	.	-	.	source_transcript=ENST00000737340.1;source_transcript_name=ENST00000737340;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737340.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001037;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001037;transcript_name=HG00140_ch_T0001037;gene_name=ENSG00000291034;ID=intron:HG00140_ch_T0001037:0;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13621438	13621542	.	-	.	source_transcript=ENST00000737340.1;source_transcript_name=ENST00000737340;source_gene=ENSG00000291034.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291034.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737340.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737340.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000291034;transcript_id=HG00140_ch_T0001037;gene_id=HG00140_ch_G0000326;Parent=HG00140_ch_T0001037;transcript_name=HG00140_ch_T0001037;gene_name=ENSG00000291034;ID=exon:HG00140_ch_T0001037:1;Name=ENSG00000291034;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	13434339	13435044	.	+	.	source_gene_common_name=RPS24P1;source_gene=ENSG00000236477.1;alternative_source_transcripts=ENST00000438550.1,ENST00000438550.1;gene_id=HG00140_ch_G0000327;gene_biotype=processed_pseudogene;gene_name=RPS24P1;gene_sources=liftoff;ID=HG00140_ch_G0000327;Name=RPS24P1
HG00140_chrY	CAT	transcript	13434339	13435044	1000	+	.	source_transcript=ENST00000438550.1;source_transcript_name=RPS24P1-201;source_gene=ENSG00000236477.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000236477.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000438550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438550.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS24P1;alternative_source_transcripts=ENST00000438550.1,ENST00000438550.1;transcript_id=HG00140_ch_T0001004;gene_id=HG00140_ch_G0000327;Parent=HG00140_ch_G0000327;transcript_name=HG00140_ch_T0001004;gene_name=RPS24P1;ID=HG00140_ch_T0001004;Name=RPS24P1
HG00140_chrY	CAT	exon	13434339	13434464	.	+	.	source_transcript=ENST00000438550.1;source_transcript_name=RPS24P1-201;source_gene=ENSG00000236477.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000236477.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000438550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS24P1;alternative_source_transcripts=ENST00000438550.1,ENST00000438550.1;transcript_id=HG00140_ch_T0001004;gene_id=HG00140_ch_G0000327;Parent=HG00140_ch_T0001004;transcript_name=HG00140_ch_T0001004;gene_name=RPS24P1;ID=exon:HG00140_ch_T0001004:0;Name=RPS24P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13434465	13434799	.	+	.	source_transcript=ENST00000438550.1;source_transcript_name=RPS24P1-201;source_gene=ENSG00000236477.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000236477.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000438550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS24P1;alternative_source_transcripts=ENST00000438550.1,ENST00000438550.1;transcript_id=HG00140_ch_T0001004;gene_id=HG00140_ch_G0000327;Parent=HG00140_ch_T0001004;transcript_name=HG00140_ch_T0001004;gene_name=RPS24P1;ID=intron:HG00140_ch_T0001004:0;Name=RPS24P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13434800	13435044	.	+	.	source_transcript=ENST00000438550.1;source_transcript_name=RPS24P1-201;source_gene=ENSG00000236477.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000236477.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000438550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS24P1;alternative_source_transcripts=ENST00000438550.1,ENST00000438550.1;transcript_id=HG00140_ch_T0001004;gene_id=HG00140_ch_G0000327;Parent=HG00140_ch_T0001004;transcript_name=HG00140_ch_T0001004;gene_name=RPS24P1;ID=exon:HG00140_ch_T0001004:1;Name=RPS24P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	13441908	13447620	.	-	.	source_gene_common_name=ARSFP1;source_gene=ENSG00000232226.2;gene_id=HG00140_ch_G0000328;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ARSFP1;gene_sources=liftoff;ID=HG00140_ch_G0000328;Name=ARSFP1
HG00140_chrY	CAT	transcript	13441908	13447620	1000	-	.	source_transcript=ENST00000398758.2;source_transcript_name=ARSFP1-201;source_gene=ENSG00000232226.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232226.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000398758.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000398758.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSFP1;transcript_id=HG00140_ch_T0001005;gene_id=HG00140_ch_G0000328;Parent=HG00140_ch_G0000328;transcript_name=HG00140_ch_T0001005;gene_name=ARSFP1;ID=HG00140_ch_T0001005;Name=ARSFP1
HG00140_chrY	CAT	exon	13441908	13442105	.	-	.	source_transcript=ENST00000398758.2;source_transcript_name=ARSFP1-201;source_gene=ENSG00000232226.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232226.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000398758.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000398758.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSFP1;transcript_id=HG00140_ch_T0001005;gene_id=HG00140_ch_G0000328;Parent=HG00140_ch_T0001005;transcript_name=HG00140_ch_T0001005;gene_name=ARSFP1;ID=exon:HG00140_ch_T0001005:0;Name=ARSFP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13442106	13443567	.	-	.	source_transcript=ENST00000398758.2;source_transcript_name=ARSFP1-201;source_gene=ENSG00000232226.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232226.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000398758.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000398758.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSFP1;transcript_id=HG00140_ch_T0001005;gene_id=HG00140_ch_G0000328;Parent=HG00140_ch_T0001005;transcript_name=HG00140_ch_T0001005;gene_name=ARSFP1;ID=intron:HG00140_ch_T0001005:0;Name=ARSFP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13443568	13443694	.	-	.	source_transcript=ENST00000398758.2;source_transcript_name=ARSFP1-201;source_gene=ENSG00000232226.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232226.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000398758.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000398758.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSFP1;transcript_id=HG00140_ch_T0001005;gene_id=HG00140_ch_G0000328;Parent=HG00140_ch_T0001005;transcript_name=HG00140_ch_T0001005;gene_name=ARSFP1;ID=exon:HG00140_ch_T0001005:1;Name=ARSFP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13443695	13447468	.	-	.	source_transcript=ENST00000398758.2;source_transcript_name=ARSFP1-201;source_gene=ENSG00000232226.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232226.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000398758.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000398758.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSFP1;transcript_id=HG00140_ch_T0001005;gene_id=HG00140_ch_G0000328;Parent=HG00140_ch_T0001005;transcript_name=HG00140_ch_T0001005;gene_name=ARSFP1;ID=intron:HG00140_ch_T0001005:1;Name=ARSFP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13447469	13447620	.	-	.	source_transcript=ENST00000398758.2;source_transcript_name=ARSFP1-201;source_gene=ENSG00000232226.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232226.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000398758.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000398758.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSFP1;transcript_id=HG00140_ch_T0001005;gene_id=HG00140_ch_G0000328;Parent=HG00140_ch_T0001005;transcript_name=HG00140_ch_T0001005;gene_name=ARSFP1;ID=exon:HG00140_ch_T0001005:2;Name=ARSFP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	13463053	13463344	.	+	.	source_gene_common_name=RN7SL702P;source_gene=ENSG00000243980.3;alternative_source_transcripts=ENST00000488394.3,ENST00000488394.3;gene_id=HG00140_ch_G0000329;gene_biotype=misc_RNA;gene_name=RN7SL702P;gene_sources=liftoff;ID=HG00140_ch_G0000329;Name=RN7SL702P
HG00140_chrY	CAT	transcript	13463053	13463344	1000	+	.	source_transcript=ENST00000488394.3;source_transcript_name=RN7SL702P-201;source_gene=ENSG00000243980.3;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000243980.3;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000488394.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000488394.3;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RN7SL702P;alternative_source_transcripts=ENST00000488394.3,ENST00000488394.3;transcript_id=HG00140_ch_T0001006;gene_id=HG00140_ch_G0000329;Parent=HG00140_ch_G0000329;transcript_name=HG00140_ch_T0001006;gene_name=RN7SL702P;ID=HG00140_ch_T0001006;Name=RN7SL702P
HG00140_chrY	CAT	exon	13463053	13463344	.	+	.	source_transcript=ENST00000488394.3;source_transcript_name=RN7SL702P-201;source_gene=ENSG00000243980.3;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000243980.3;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000488394.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000488394.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RN7SL702P;alternative_source_transcripts=ENST00000488394.3,ENST00000488394.3;transcript_id=HG00140_ch_T0001006;gene_id=HG00140_ch_G0000329;Parent=HG00140_ch_T0001006;transcript_name=HG00140_ch_T0001006;gene_name=RN7SL702P;ID=exon:HG00140_ch_T0001006:0;Name=RN7SL702P;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	13511224	13512436	.	+	.	source_gene_common_name=FAM8A4P;source_gene=ENSG00000232730.1;alternative_source_transcripts=ENST00000435433.1,ENST00000435433.1;gene_id=HG00140_ch_G0000330;gene_biotype=processed_pseudogene;gene_name=FAM8A4P;gene_sources=liftoff;ID=HG00140_ch_G0000330;Name=FAM8A4P
HG00140_chrY	CAT	transcript	13511224	13512436	1000	+	.	source_transcript=ENST00000435433.1;source_transcript_name=FAM8A4P-201;source_gene=ENSG00000232730.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232730.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000435433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435433.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM8A4P;alternative_source_transcripts=ENST00000435433.1,ENST00000435433.1;transcript_id=HG00140_ch_T0001007;gene_id=HG00140_ch_G0000330;Parent=HG00140_ch_G0000330;transcript_name=HG00140_ch_T0001007;gene_name=FAM8A4P;ID=HG00140_ch_T0001007;Name=FAM8A4P
HG00140_chrY	CAT	exon	13511224	13512436	.	+	.	source_transcript=ENST00000435433.1;source_transcript_name=FAM8A4P-201;source_gene=ENSG00000232730.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232730.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000435433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435433.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM8A4P;alternative_source_transcripts=ENST00000435433.1,ENST00000435433.1;transcript_id=HG00140_ch_T0001007;gene_id=HG00140_ch_G0000330;Parent=HG00140_ch_T0001007;transcript_name=HG00140_ch_T0001007;gene_name=FAM8A4P;ID=exon:HG00140_ch_T0001007:0;Name=FAM8A4P;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	13517243	13537288	.	+	.	source_gene_common_name=ENSG00000290435;source_gene=ENSG00000290435.2;gene_id=HG00140_ch_G0000331;gene_biotype=lncRNA;gene_name=ENSG00000290435;gene_sources=liftoff;ID=HG00140_ch_G0000331;Name=ENSG00000290435
HG00140_chrY	CAT	transcript	13517243	13537121	1000	+	.	source_transcript=ENST00000737467.1;source_transcript_name=ENST00000737467;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737467.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=HG00140_ch_T0001011;gene_id=HG00140_ch_G0000331;Parent=HG00140_ch_G0000331;transcript_name=HG00140_ch_T0001011;gene_name=ENSG00000290435;ID=HG00140_ch_T0001011;Name=ENSG00000290435
HG00140_chrY	CAT	exon	13517243	13517644	.	+	.	source_transcript=ENST00000737467.1;source_transcript_name=ENST00000737467;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737467.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=HG00140_ch_T0001011;gene_id=HG00140_ch_G0000331;Parent=HG00140_ch_T0001011;transcript_name=HG00140_ch_T0001011;gene_name=ENSG00000290435;ID=exon:HG00140_ch_T0001011:0;Name=ENSG00000290435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13517645	13536741	.	+	.	source_transcript=ENST00000737467.1;source_transcript_name=ENST00000737467;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737467.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=HG00140_ch_T0001011;gene_id=HG00140_ch_G0000331;Parent=HG00140_ch_T0001011;transcript_name=HG00140_ch_T0001011;gene_name=ENSG00000290435;ID=intron:HG00140_ch_T0001011:0;Name=ENSG00000290435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13536742	13537121	.	+	.	source_transcript=ENST00000737467.1;source_transcript_name=ENST00000737467;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737467.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737467.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=HG00140_ch_T0001011;gene_id=HG00140_ch_G0000331;Parent=HG00140_ch_T0001011;transcript_name=HG00140_ch_T0001011;gene_name=ENSG00000290435;ID=exon:HG00140_ch_T0001011:1;Name=ENSG00000290435;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	13517530	13529517	1000	+	.	source_transcript=ENST00000737469.1;source_transcript_name=ENST00000737469;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737469.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=HG00140_ch_T0001012;gene_id=HG00140_ch_G0000331;Parent=HG00140_ch_G0000331;transcript_name=HG00140_ch_T0001012;gene_name=ENSG00000290435;ID=HG00140_ch_T0001012;Name=ENSG00000290435
HG00140_chrY	CAT	exon	13517530	13517644	.	+	.	source_transcript=ENST00000737469.1;source_transcript_name=ENST00000737469;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737469.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=HG00140_ch_T0001012;gene_id=HG00140_ch_G0000331;Parent=HG00140_ch_T0001012;transcript_name=HG00140_ch_T0001012;gene_name=ENSG00000290435;ID=exon:HG00140_ch_T0001012:0;Name=ENSG00000290435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13517645	13529414	.	+	.	source_transcript=ENST00000737469.1;source_transcript_name=ENST00000737469;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737469.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=HG00140_ch_T0001012;gene_id=HG00140_ch_G0000331;Parent=HG00140_ch_T0001012;transcript_name=HG00140_ch_T0001012;gene_name=ENSG00000290435;ID=intron:HG00140_ch_T0001012:0;Name=ENSG00000290435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13529415	13529517	.	+	.	source_transcript=ENST00000737469.1;source_transcript_name=ENST00000737469;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737469.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737469.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=HG00140_ch_T0001012;gene_id=HG00140_ch_G0000331;Parent=HG00140_ch_T0001012;transcript_name=HG00140_ch_T0001012;gene_name=ENSG00000290435;ID=exon:HG00140_ch_T0001012:1;Name=ENSG00000290435;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	13521674	13537288	1000	+	.	source_transcript=ENST00000737468.1;source_transcript_name=ENST00000737468;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737468.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=HG00140_ch_T0001013;gene_id=HG00140_ch_G0000331;Parent=HG00140_ch_G0000331;transcript_name=HG00140_ch_T0001013;gene_name=ENSG00000290435;ID=HG00140_ch_T0001013;Name=ENSG00000290435
HG00140_chrY	CAT	exon	13521674	13521893	.	+	.	source_transcript=ENST00000737468.1;source_transcript_name=ENST00000737468;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737468.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=HG00140_ch_T0001013;gene_id=HG00140_ch_G0000331;Parent=HG00140_ch_T0001013;transcript_name=HG00140_ch_T0001013;gene_name=ENSG00000290435;ID=exon:HG00140_ch_T0001013:0;Name=ENSG00000290435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13521894	13536741	.	+	.	source_transcript=ENST00000737468.1;source_transcript_name=ENST00000737468;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737468.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=HG00140_ch_T0001013;gene_id=HG00140_ch_G0000331;Parent=HG00140_ch_T0001013;transcript_name=HG00140_ch_T0001013;gene_name=ENSG00000290435;ID=intron:HG00140_ch_T0001013:0;Name=ENSG00000290435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13536742	13537288	.	+	.	source_transcript=ENST00000737468.1;source_transcript_name=ENST00000737468;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737468.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=HG00140_ch_T0001013;gene_id=HG00140_ch_G0000331;Parent=HG00140_ch_T0001013;transcript_name=HG00140_ch_T0001013;gene_name=ENSG00000290435;ID=exon:HG00140_ch_T0001013:1;Name=ENSG00000290435;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	13534679	13537101	1000	+	.	source_transcript=ENST00000430152.1;source_transcript_name=ENST00000430152;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430152.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=HG00140_ch_T0001016;gene_id=HG00140_ch_G0000331;Parent=HG00140_ch_G0000331;transcript_name=HG00140_ch_T0001016;gene_name=ENSG00000290435;ID=HG00140_ch_T0001016;Name=ENSG00000290435
HG00140_chrY	CAT	exon	13534679	13534817	.	+	.	source_transcript=ENST00000430152.1;source_transcript_name=ENST00000430152;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430152.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=HG00140_ch_T0001016;gene_id=HG00140_ch_G0000331;Parent=HG00140_ch_T0001016;transcript_name=HG00140_ch_T0001016;gene_name=ENSG00000290435;ID=exon:HG00140_ch_T0001016:0;Name=ENSG00000290435;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13534818	13536741	.	+	.	source_transcript=ENST00000430152.1;source_transcript_name=ENST00000430152;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430152.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=HG00140_ch_T0001016;gene_id=HG00140_ch_G0000331;Parent=HG00140_ch_T0001016;transcript_name=HG00140_ch_T0001016;gene_name=ENSG00000290435;ID=intron:HG00140_ch_T0001016:0;Name=ENSG00000290435;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13536742	13537101	.	+	.	source_transcript=ENST00000430152.1;source_transcript_name=ENST00000430152;source_gene=ENSG00000290435.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290435.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430152.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290435;transcript_id=HG00140_ch_T0001016;gene_id=HG00140_ch_G0000331;Parent=HG00140_ch_T0001016;transcript_name=HG00140_ch_T0001016;gene_name=ENSG00000290435;ID=exon:HG00140_ch_T0001016:1;Name=ENSG00000290435;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	13529415	13537093	.	+	.	source_gene_common_name=ARSLP1;source_gene=ENSG00000224060.4;gene_id=HG00140_ch_G0000332;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ARSLP1;gene_sources=liftoff;ID=HG00140_ch_G0000332;Name=ARSLP1
HG00140_chrY	CAT	transcript	13529415	13537093	1000	+	.	source_transcript=ENST00000420443.1;source_transcript_name=ARSLP1-201;source_gene=ENSG00000224060.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224060.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420443.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420443.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSLP1;transcript_id=HG00140_ch_T0001015;gene_id=HG00140_ch_G0000332;Parent=HG00140_ch_G0000332;transcript_name=HG00140_ch_T0001015;gene_name=ARSLP1;ID=HG00140_ch_T0001015;Name=ARSLP1
HG00140_chrY	CAT	exon	13529415	13529577	.	+	.	source_transcript=ENST00000420443.1;source_transcript_name=ARSLP1-201;source_gene=ENSG00000224060.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224060.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420443.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420443.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSLP1;transcript_id=HG00140_ch_T0001015;gene_id=HG00140_ch_G0000332;Parent=HG00140_ch_T0001015;transcript_name=HG00140_ch_T0001015;gene_name=ARSLP1;ID=exon:HG00140_ch_T0001015:0;Name=ARSLP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13529578	13530777	.	+	.	source_transcript=ENST00000420443.1;source_transcript_name=ARSLP1-201;source_gene=ENSG00000224060.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224060.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420443.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420443.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSLP1;transcript_id=HG00140_ch_T0001015;gene_id=HG00140_ch_G0000332;Parent=HG00140_ch_T0001015;transcript_name=HG00140_ch_T0001015;gene_name=ARSLP1;ID=intron:HG00140_ch_T0001015:0;Name=ARSLP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13530778	13530897	.	+	.	source_transcript=ENST00000420443.1;source_transcript_name=ARSLP1-201;source_gene=ENSG00000224060.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224060.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420443.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420443.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSLP1;transcript_id=HG00140_ch_T0001015;gene_id=HG00140_ch_G0000332;Parent=HG00140_ch_T0001015;transcript_name=HG00140_ch_T0001015;gene_name=ARSLP1;ID=exon:HG00140_ch_T0001015:1;Name=ARSLP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13530898	13536741	.	+	.	source_transcript=ENST00000420443.1;source_transcript_name=ARSLP1-201;source_gene=ENSG00000224060.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224060.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420443.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420443.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSLP1;transcript_id=HG00140_ch_T0001015;gene_id=HG00140_ch_G0000332;Parent=HG00140_ch_T0001015;transcript_name=HG00140_ch_T0001015;gene_name=ARSLP1;ID=intron:HG00140_ch_T0001015:1;Name=ARSLP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13536742	13537093	.	+	.	source_transcript=ENST00000420443.1;source_transcript_name=ARSLP1-201;source_gene=ENSG00000224060.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224060.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420443.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420443.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSLP1;transcript_id=HG00140_ch_T0001015;gene_id=HG00140_ch_G0000332;Parent=HG00140_ch_T0001015;transcript_name=HG00140_ch_T0001015;gene_name=ARSLP1;ID=exon:HG00140_ch_T0001015:2;Name=ARSLP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	13543702	13577129	.	+	.	source_gene_common_name=ARSDP1;source_gene=ENSG00000225117.2;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;gene_id=HG00140_ch_G0000333;gene_biotype=unprocessed_pseudogene;gene_name=ARSDP1;gene_sources=liftoff;ID=HG00140_ch_G0000333;Name=ARSDP1
HG00140_chrY	CAT	transcript	13543702	13577129	1000	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG00140_ch_T0001017;gene_id=HG00140_ch_G0000333;Parent=HG00140_ch_G0000333;transcript_name=HG00140_ch_T0001017;gene_name=ARSDP1;ID=HG00140_ch_T0001017;Name=ARSDP1
HG00140_chrY	CAT	exon	13543702	13543744	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG00140_ch_T0001017;gene_id=HG00140_ch_G0000333;Parent=HG00140_ch_T0001017;transcript_name=HG00140_ch_T0001017;gene_name=ARSDP1;ID=exon:HG00140_ch_T0001017:0;Name=ARSDP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13543745	13551830	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG00140_ch_T0001017;gene_id=HG00140_ch_G0000333;Parent=HG00140_ch_T0001017;transcript_name=HG00140_ch_T0001017;gene_name=ARSDP1;ID=intron:HG00140_ch_T0001017:0;Name=ARSDP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13551831	13551980	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG00140_ch_T0001017;gene_id=HG00140_ch_G0000333;Parent=HG00140_ch_T0001017;transcript_name=HG00140_ch_T0001017;gene_name=ARSDP1;ID=exon:HG00140_ch_T0001017:1;Name=ARSDP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13551981	13555541	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG00140_ch_T0001017;gene_id=HG00140_ch_G0000333;Parent=HG00140_ch_T0001017;transcript_name=HG00140_ch_T0001017;gene_name=ARSDP1;ID=intron:HG00140_ch_T0001017:1;Name=ARSDP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13555542	13555663	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG00140_ch_T0001017;gene_id=HG00140_ch_G0000333;Parent=HG00140_ch_T0001017;transcript_name=HG00140_ch_T0001017;gene_name=ARSDP1;ID=exon:HG00140_ch_T0001017:2;Name=ARSDP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13555664	13556798	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG00140_ch_T0001017;gene_id=HG00140_ch_G0000333;Parent=HG00140_ch_T0001017;transcript_name=HG00140_ch_T0001017;gene_name=ARSDP1;ID=intron:HG00140_ch_T0001017:2;Name=ARSDP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13556799	13556920	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG00140_ch_T0001017;gene_id=HG00140_ch_G0000333;Parent=HG00140_ch_T0001017;transcript_name=HG00140_ch_T0001017;gene_name=ARSDP1;ID=exon:HG00140_ch_T0001017:3;Name=ARSDP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13556921	13563464	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG00140_ch_T0001017;gene_id=HG00140_ch_G0000333;Parent=HG00140_ch_T0001017;transcript_name=HG00140_ch_T0001017;gene_name=ARSDP1;ID=intron:HG00140_ch_T0001017:3;Name=ARSDP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13563465	13563879	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG00140_ch_T0001017;gene_id=HG00140_ch_G0000333;Parent=HG00140_ch_T0001017;transcript_name=HG00140_ch_T0001017;gene_name=ARSDP1;ID=exon:HG00140_ch_T0001017:4;Name=ARSDP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13563880	13567484	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG00140_ch_T0001017;gene_id=HG00140_ch_G0000333;Parent=HG00140_ch_T0001017;transcript_name=HG00140_ch_T0001017;gene_name=ARSDP1;ID=intron:HG00140_ch_T0001017:4;Name=ARSDP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13567485	13567621	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG00140_ch_T0001017;gene_id=HG00140_ch_G0000333;Parent=HG00140_ch_T0001017;transcript_name=HG00140_ch_T0001017;gene_name=ARSDP1;ID=exon:HG00140_ch_T0001017:5;Name=ARSDP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13567622	13572136	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG00140_ch_T0001017;gene_id=HG00140_ch_G0000333;Parent=HG00140_ch_T0001017;transcript_name=HG00140_ch_T0001017;gene_name=ARSDP1;ID=intron:HG00140_ch_T0001017:5;Name=ARSDP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13572137	13572270	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG00140_ch_T0001017;gene_id=HG00140_ch_G0000333;Parent=HG00140_ch_T0001017;transcript_name=HG00140_ch_T0001017;gene_name=ARSDP1;ID=exon:HG00140_ch_T0001017:6;Name=ARSDP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13572271	13572941	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG00140_ch_T0001017;gene_id=HG00140_ch_G0000333;Parent=HG00140_ch_T0001017;transcript_name=HG00140_ch_T0001017;gene_name=ARSDP1;ID=intron:HG00140_ch_T0001017:6;Name=ARSDP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13572942	13573104	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG00140_ch_T0001017;gene_id=HG00140_ch_G0000333;Parent=HG00140_ch_T0001017;transcript_name=HG00140_ch_T0001017;gene_name=ARSDP1;ID=exon:HG00140_ch_T0001017:7;Name=ARSDP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13573105	13574109	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG00140_ch_T0001017;gene_id=HG00140_ch_G0000333;Parent=HG00140_ch_T0001017;transcript_name=HG00140_ch_T0001017;gene_name=ARSDP1;ID=intron:HG00140_ch_T0001017:7;Name=ARSDP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13574110	13574231	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG00140_ch_T0001017;gene_id=HG00140_ch_G0000333;Parent=HG00140_ch_T0001017;transcript_name=HG00140_ch_T0001017;gene_name=ARSDP1;ID=exon:HG00140_ch_T0001017:8;Name=ARSDP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13574232	13576770	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG00140_ch_T0001017;gene_id=HG00140_ch_G0000333;Parent=HG00140_ch_T0001017;transcript_name=HG00140_ch_T0001017;gene_name=ARSDP1;ID=intron:HG00140_ch_T0001017:8;Name=ARSDP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13576771	13577129	.	+	.	source_transcript=ENST00000443820.2;source_transcript_name=ARSDP1-201;source_gene=ENSG00000225117.2;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225117.2;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443820.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000443820.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ARSDP1;alternative_source_transcripts=ENST00000443820.2,ENST00000443820.2;transcript_id=HG00140_ch_T0001017;gene_id=HG00140_ch_G0000333;Parent=HG00140_ch_T0001017;transcript_name=HG00140_ch_T0001017;gene_name=ARSDP1;ID=exon:HG00140_ch_T0001017:9;Name=ARSDP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	13596593	13610119	.	-	.	source_gene_common_name=GYG2P1;source_gene=ENSG00000206159.14;gene_id=HG00140_ch_G0000334;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=GYG2P1;gene_sources=liftoff;ID=HG00140_ch_G0000334;Name=GYG2P1
HG00140_chrY	CAT	transcript	13596593	13610119	1000	-	.	source_transcript=ENST00000382965.4;source_transcript_name=GYG2P1-201;source_gene=ENSG00000206159.14;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000206159.14;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382965.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382965.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;transcript_id=HG00140_ch_T0001036;gene_id=HG00140_ch_G0000334;Parent=HG00140_ch_G0000334;transcript_name=HG00140_ch_T0001036;gene_name=GYG2P1;ID=HG00140_ch_T0001036;Name=GYG2P1
HG00140_chrY	CAT	exon	13596593	13596734	.	-	.	source_transcript=ENST00000382965.4;source_transcript_name=GYG2P1-201;source_gene=ENSG00000206159.14;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000206159.14;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382965.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382965.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;transcript_id=HG00140_ch_T0001036;gene_id=HG00140_ch_G0000334;Parent=HG00140_ch_T0001036;transcript_name=HG00140_ch_T0001036;gene_name=GYG2P1;ID=exon:HG00140_ch_T0001036:0;Name=GYG2P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13596735	13610112	.	-	.	source_transcript=ENST00000382965.4;source_transcript_name=GYG2P1-201;source_gene=ENSG00000206159.14;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000206159.14;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382965.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382965.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;transcript_id=HG00140_ch_T0001036;gene_id=HG00140_ch_G0000334;Parent=HG00140_ch_T0001036;transcript_name=HG00140_ch_T0001036;gene_name=GYG2P1;ID=intron:HG00140_ch_T0001036:0;Name=GYG2P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13610113	13610119	.	-	.	source_transcript=ENST00000382965.4;source_transcript_name=GYG2P1-201;source_gene=ENSG00000206159.14;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000206159.14;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000382965.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382965.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;transcript_id=HG00140_ch_T0001036;gene_id=HG00140_ch_G0000334;Parent=HG00140_ch_T0001036;transcript_name=HG00140_ch_T0001036;gene_name=GYG2P1;ID=exon:HG00140_ch_T0001036:1;Name=GYG2P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	13629843	13697177	.	-	.	source_gene_common_name=XGY1;source_gene=ENSG00000227447.1;gene_id=HG00140_ch_G0000335;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=XGY1;gene_sources=liftoff;ID=HG00140_ch_G0000335;Name=XGY1
HG00140_chrY	CAT	transcript	13629843	13697177	1000	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=HG00140_ch_T0001038;gene_id=HG00140_ch_G0000335;Parent=HG00140_ch_G0000335;transcript_name=HG00140_ch_T0001038;gene_name=XGY1;ID=HG00140_ch_T0001038;Name=XGY1
HG00140_chrY	CAT	exon	13629843	13629959	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=HG00140_ch_T0001038;gene_id=HG00140_ch_G0000335;Parent=HG00140_ch_T0001038;transcript_name=HG00140_ch_T0001038;gene_name=XGY1;ID=exon:HG00140_ch_T0001038:0;Name=XGY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13629960	13633061	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=HG00140_ch_T0001038;gene_id=HG00140_ch_G0000335;Parent=HG00140_ch_T0001038;transcript_name=HG00140_ch_T0001038;gene_name=XGY1;ID=intron:HG00140_ch_T0001038:0;Name=XGY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13633062	13633097	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=HG00140_ch_T0001038;gene_id=HG00140_ch_G0000335;Parent=HG00140_ch_T0001038;transcript_name=HG00140_ch_T0001038;gene_name=XGY1;ID=exon:HG00140_ch_T0001038:1;Name=XGY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13633098	13645944	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=HG00140_ch_T0001038;gene_id=HG00140_ch_G0000335;Parent=HG00140_ch_T0001038;transcript_name=HG00140_ch_T0001038;gene_name=XGY1;ID=intron:HG00140_ch_T0001038:1;Name=XGY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13645945	13645995	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=HG00140_ch_T0001038;gene_id=HG00140_ch_G0000335;Parent=HG00140_ch_T0001038;transcript_name=HG00140_ch_T0001038;gene_name=XGY1;ID=exon:HG00140_ch_T0001038:2;Name=XGY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13645996	13649501	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=HG00140_ch_T0001038;gene_id=HG00140_ch_G0000335;Parent=HG00140_ch_T0001038;transcript_name=HG00140_ch_T0001038;gene_name=XGY1;ID=intron:HG00140_ch_T0001038:2;Name=XGY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13649502	13649559	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=HG00140_ch_T0001038;gene_id=HG00140_ch_G0000335;Parent=HG00140_ch_T0001038;transcript_name=HG00140_ch_T0001038;gene_name=XGY1;ID=exon:HG00140_ch_T0001038:3;Name=XGY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13649560	13658242	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=HG00140_ch_T0001038;gene_id=HG00140_ch_G0000335;Parent=HG00140_ch_T0001038;transcript_name=HG00140_ch_T0001038;gene_name=XGY1;ID=intron:HG00140_ch_T0001038:3;Name=XGY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13658243	13658305	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=HG00140_ch_T0001038;gene_id=HG00140_ch_G0000335;Parent=HG00140_ch_T0001038;transcript_name=HG00140_ch_T0001038;gene_name=XGY1;ID=exon:HG00140_ch_T0001038:4;Name=XGY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13658306	13674530	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=HG00140_ch_T0001038;gene_id=HG00140_ch_G0000335;Parent=HG00140_ch_T0001038;transcript_name=HG00140_ch_T0001038;gene_name=XGY1;ID=intron:HG00140_ch_T0001038:4;Name=XGY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13674531	13674554	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=HG00140_ch_T0001038;gene_id=HG00140_ch_G0000335;Parent=HG00140_ch_T0001038;transcript_name=HG00140_ch_T0001038;gene_name=XGY1;ID=exon:HG00140_ch_T0001038:5;Name=XGY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13674555	13678233	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=HG00140_ch_T0001038;gene_id=HG00140_ch_G0000335;Parent=HG00140_ch_T0001038;transcript_name=HG00140_ch_T0001038;gene_name=XGY1;ID=intron:HG00140_ch_T0001038:5;Name=XGY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13678234	13678269	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=HG00140_ch_T0001038;gene_id=HG00140_ch_G0000335;Parent=HG00140_ch_T0001038;transcript_name=HG00140_ch_T0001038;gene_name=XGY1;ID=exon:HG00140_ch_T0001038:6;Name=XGY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13678270	13697116	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=HG00140_ch_T0001038;gene_id=HG00140_ch_G0000335;Parent=HG00140_ch_T0001038;transcript_name=HG00140_ch_T0001038;gene_name=XGY1;ID=intron:HG00140_ch_T0001038:6;Name=XGY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13697117	13697177	.	-	.	source_transcript=ENST00000381172.3;source_transcript_name=XGY1-201;source_gene=ENSG00000227447.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227447.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000381172.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000381172.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY1;transcript_id=HG00140_ch_T0001038;gene_id=HG00140_ch_G0000335;Parent=HG00140_ch_T0001038;transcript_name=HG00140_ch_T0001038;gene_name=XGY1;ID=exon:HG00140_ch_T0001038:7;Name=XGY1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	13668593	13697524	.	-	.	source_gene_common_name=ENSG00000296286;source_gene=ENSG00000296286.1;gene_id=HG00140_ch_G0000336;gene_biotype=lncRNA;gene_name=ENSG00000296286;gene_sources=liftoff;ID=HG00140_ch_G0000336;Name=ENSG00000296286
HG00140_chrY	CAT	transcript	13668593	13697524	1000	-	.	source_transcript=ENST00000737822.1;source_transcript_name=ENST00000737822;source_gene=ENSG00000296286.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296286.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737822.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296286;transcript_id=HG00140_ch_T0001039;gene_id=HG00140_ch_G0000336;Parent=HG00140_ch_G0000336;transcript_name=HG00140_ch_T0001039;gene_name=ENSG00000296286;ID=HG00140_ch_T0001039;Name=ENSG00000296286
HG00140_chrY	CAT	exon	13668593	13669088	.	-	.	source_transcript=ENST00000737822.1;source_transcript_name=ENST00000737822;source_gene=ENSG00000296286.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296286.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737822.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296286;transcript_id=HG00140_ch_T0001039;gene_id=HG00140_ch_G0000336;Parent=HG00140_ch_T0001039;transcript_name=HG00140_ch_T0001039;gene_name=ENSG00000296286;ID=exon:HG00140_ch_T0001039:0;Name=ENSG00000296286;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13669089	13674530	.	-	.	source_transcript=ENST00000737822.1;source_transcript_name=ENST00000737822;source_gene=ENSG00000296286.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296286.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737822.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296286;transcript_id=HG00140_ch_T0001039;gene_id=HG00140_ch_G0000336;Parent=HG00140_ch_T0001039;transcript_name=HG00140_ch_T0001039;gene_name=ENSG00000296286;ID=intron:HG00140_ch_T0001039:0;Name=ENSG00000296286;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13674531	13674554	.	-	.	source_transcript=ENST00000737822.1;source_transcript_name=ENST00000737822;source_gene=ENSG00000296286.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296286.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737822.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296286;transcript_id=HG00140_ch_T0001039;gene_id=HG00140_ch_G0000336;Parent=HG00140_ch_T0001039;transcript_name=HG00140_ch_T0001039;gene_name=ENSG00000296286;ID=exon:HG00140_ch_T0001039:1;Name=ENSG00000296286;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13674555	13697116	.	-	.	source_transcript=ENST00000737822.1;source_transcript_name=ENST00000737822;source_gene=ENSG00000296286.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296286.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737822.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296286;transcript_id=HG00140_ch_T0001039;gene_id=HG00140_ch_G0000336;Parent=HG00140_ch_T0001039;transcript_name=HG00140_ch_T0001039;gene_name=ENSG00000296286;ID=intron:HG00140_ch_T0001039:1;Name=ENSG00000296286;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13697117	13697524	.	-	.	source_transcript=ENST00000737822.1;source_transcript_name=ENST00000737822;source_gene=ENSG00000296286.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296286.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000737822.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000737822.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296286;transcript_id=HG00140_ch_T0001039;gene_id=HG00140_ch_G0000336;Parent=HG00140_ch_T0001039;transcript_name=HG00140_ch_T0001039;gene_name=ENSG00000296286;ID=exon:HG00140_ch_T0001039:2;Name=ENSG00000296286;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	13727648	14050829	.	+	.	source_gene_common_name=USP9Y;source_gene=ENSG00000114374.13;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;gene_id=HG00140_ch_G0000337;gene_biotype=protein_coding;gene_name=USP9Y;gene_sources=liftoff;ID=HG00140_ch_G0000337;Name=USP9Y
HG00140_chrY	CAT	transcript	13727648	13898871	1000	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG00140_ch_T0001040;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_G0000337;transcript_name=HG00140_ch_T0001040;gene_name=USP9Y;ID=HG00140_ch_T0001040;Name=USP9Y
HG00140_chrY	CAT	exon	13727648	13728005	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG00140_ch_T0001040;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001040;transcript_name=HG00140_ch_T0001040;gene_name=USP9Y;ID=exon:HG00140_ch_T0001040:0;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13728006	13734781	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG00140_ch_T0001040;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001040;transcript_name=HG00140_ch_T0001040;gene_name=USP9Y;ID=intron:HG00140_ch_T0001040:0;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13734782	13734936	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG00140_ch_T0001040;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001040;transcript_name=HG00140_ch_T0001040;gene_name=USP9Y;ID=exon:HG00140_ch_T0001040:1;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13734937	13736108	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG00140_ch_T0001040;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001040;transcript_name=HG00140_ch_T0001040;gene_name=USP9Y;ID=intron:HG00140_ch_T0001040:1;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13736109	13736248	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG00140_ch_T0001040;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001040;transcript_name=HG00140_ch_T0001040;gene_name=USP9Y;ID=exon:HG00140_ch_T0001040:2;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13736249	13852354	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG00140_ch_T0001040;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001040;transcript_name=HG00140_ch_T0001040;gene_name=USP9Y;ID=intron:HG00140_ch_T0001040:2;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13852355	13852705	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG00140_ch_T0001040;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001040;transcript_name=HG00140_ch_T0001040;gene_name=USP9Y;ID=exon:HG00140_ch_T0001040:3;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13852706	13854638	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG00140_ch_T0001040;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001040;transcript_name=HG00140_ch_T0001040;gene_name=USP9Y;ID=intron:HG00140_ch_T0001040:3;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13854639	13854685	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG00140_ch_T0001040;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001040;transcript_name=HG00140_ch_T0001040;gene_name=USP9Y;ID=exon:HG00140_ch_T0001040:4;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13854686	13876510	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG00140_ch_T0001040;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001040;transcript_name=HG00140_ch_T0001040;gene_name=USP9Y;ID=intron:HG00140_ch_T0001040:4;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13876511	13876604	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG00140_ch_T0001040;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001040;transcript_name=HG00140_ch_T0001040;gene_name=USP9Y;ID=exon:HG00140_ch_T0001040:5;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13876605	13880323	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG00140_ch_T0001040;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001040;transcript_name=HG00140_ch_T0001040;gene_name=USP9Y;ID=intron:HG00140_ch_T0001040:5;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13880324	13880439	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG00140_ch_T0001040;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001040;transcript_name=HG00140_ch_T0001040;gene_name=USP9Y;ID=exon:HG00140_ch_T0001040:6;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13880440	13892007	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG00140_ch_T0001040;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001040;transcript_name=HG00140_ch_T0001040;gene_name=USP9Y;ID=intron:HG00140_ch_T0001040:6;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13892008	13892053	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG00140_ch_T0001040;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001040;transcript_name=HG00140_ch_T0001040;gene_name=USP9Y;ID=exon:HG00140_ch_T0001040:7;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13892054	13897761	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG00140_ch_T0001040;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001040;transcript_name=HG00140_ch_T0001040;gene_name=USP9Y;ID=intron:HG00140_ch_T0001040:7;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13897762	13898871	.	+	.	source_transcript=ENST00000457658.6;source_transcript_name=USP9Y-206;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000457658.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000457658.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000457658.6,ENST00000457658.6;transcript_id=HG00140_ch_T0001040;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001040;transcript_name=HG00140_ch_T0001040;gene_name=USP9Y;ID=exon:HG00140_ch_T0001040:8;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	13852333	13882231	1000	+	.	source_transcript=ENST00000440408.5;source_transcript_name=USP9Y-204;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000440408.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440408.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000440408.5,ENST00000440408.5;transcript_id=HG00140_ch_T0001048;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_G0000337;transcript_name=HG00140_ch_T0001048;gene_name=USP9Y;ID=HG00140_ch_T0001048;Name=USP9Y
HG00140_chrY	CAT	exon	13852333	13852705	.	+	.	source_transcript=ENST00000440408.5;source_transcript_name=USP9Y-204;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000440408.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440408.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000440408.5,ENST00000440408.5;transcript_id=HG00140_ch_T0001048;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001048;transcript_name=HG00140_ch_T0001048;gene_name=USP9Y;ID=exon:HG00140_ch_T0001048:0;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13852706	13854638	.	+	.	source_transcript=ENST00000440408.5;source_transcript_name=USP9Y-204;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000440408.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440408.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000440408.5,ENST00000440408.5;transcript_id=HG00140_ch_T0001048;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001048;transcript_name=HG00140_ch_T0001048;gene_name=USP9Y;ID=intron:HG00140_ch_T0001048:0;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13854639	13854685	.	+	.	source_transcript=ENST00000440408.5;source_transcript_name=USP9Y-204;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000440408.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440408.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000440408.5,ENST00000440408.5;transcript_id=HG00140_ch_T0001048;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001048;transcript_name=HG00140_ch_T0001048;gene_name=USP9Y;ID=exon:HG00140_ch_T0001048:1;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13854686	13876510	.	+	.	source_transcript=ENST00000440408.5;source_transcript_name=USP9Y-204;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000440408.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440408.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000440408.5,ENST00000440408.5;transcript_id=HG00140_ch_T0001048;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001048;transcript_name=HG00140_ch_T0001048;gene_name=USP9Y;ID=intron:HG00140_ch_T0001048:1;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13876511	13876604	.	+	.	source_transcript=ENST00000440408.5;source_transcript_name=USP9Y-204;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000440408.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440408.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000440408.5,ENST00000440408.5;transcript_id=HG00140_ch_T0001048;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001048;transcript_name=HG00140_ch_T0001048;gene_name=USP9Y;ID=exon:HG00140_ch_T0001048:2;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13876605	13877461	.	+	.	source_transcript=ENST00000440408.5;source_transcript_name=USP9Y-204;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000440408.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440408.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000440408.5,ENST00000440408.5;transcript_id=HG00140_ch_T0001048;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001048;transcript_name=HG00140_ch_T0001048;gene_name=USP9Y;ID=intron:HG00140_ch_T0001048:2;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13877462	13882231	.	+	.	source_transcript=ENST00000440408.5;source_transcript_name=USP9Y-204;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000440408.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440408.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000440408.5,ENST00000440408.5;transcript_id=HG00140_ch_T0001048;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001048;transcript_name=HG00140_ch_T0001048;gene_name=USP9Y;ID=exon:HG00140_ch_T0001048:3;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	13852367	14050792	100	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_G0000337;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=HG00140_ch_T0001049;Name=USP9Y
HG00140_chrY	CAT	exon	13852367	13852705	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=exon:HG00140_ch_T0001049:0;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13852706	13854638	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=intron:HG00140_ch_T0001049:0;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13854639	13854685	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=exon:HG00140_ch_T0001049:1;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13854686	13876510	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=intron:HG00140_ch_T0001049:1;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13876511	13876604	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=exon:HG00140_ch_T0001049:2;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13876605	13892007	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=intron:HG00140_ch_T0001049:2;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13892008	13892053	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=exon:HG00140_ch_T0001049:3;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13892054	13899389	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=intron:HG00140_ch_T0001049:3;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13899390	13899545	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=exon:HG00140_ch_T0001049:4;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	13899450	13899545	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001049:0;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	13899450	13899452	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=start_codon:HG00140_ch_T0001049;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13899546	13910590	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=intron:HG00140_ch_T0001049:4;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13910591	13910739	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=exon:HG00140_ch_T0001049:5;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	13910591	13910739	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001049:1;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13910740	13912108	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=intron:HG00140_ch_T0001049:5;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13912109	13912188	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=exon:HG00140_ch_T0001049:6;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	13912109	13912188	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001049:2;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13912189	13915113	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=intron:HG00140_ch_T0001049:6;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13915114	13915226	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=exon:HG00140_ch_T0001049:7;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	13915114	13915226	.	+	2	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001049:3;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13915227	13916575	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=intron:HG00140_ch_T0001049:7;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13916576	13916794	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=exon:HG00140_ch_T0001049:8;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	13916576	13916794	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001049:4;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13916795	13925612	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=intron:HG00140_ch_T0001049:8;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13925613	13925728	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=exon:HG00140_ch_T0001049:9;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	13925613	13925728	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001049:5;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13925729	13925998	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=intron:HG00140_ch_T0001049:9;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13925999	13926250	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=exon:HG00140_ch_T0001049:10;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	13925999	13926250	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001049:6;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13926251	13926411	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=intron:HG00140_ch_T0001049:10;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13926412	13926550	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=exon:HG00140_ch_T0001049:11;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	13926412	13926550	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001049:7;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13926551	13928157	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=intron:HG00140_ch_T0001049:11;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13928158	13928310	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=exon:HG00140_ch_T0001049:12;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	13928158	13928310	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001049:8;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13928311	13929525	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=intron:HG00140_ch_T0001049:12;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13929526	13929630	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=exon:HG00140_ch_T0001049:13;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	13929526	13929630	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001049:9;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13929631	13947192	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=intron:HG00140_ch_T0001049:13;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13947193	13947399	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=exon:HG00140_ch_T0001049:14;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	13947193	13947399	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001049:10;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13947400	13948506	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=intron:HG00140_ch_T0001049:14;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13948507	13948643	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=exon:HG00140_ch_T0001049:15;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	13948507	13948643	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001049:11;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13948644	13950484	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=intron:HG00140_ch_T0001049:15;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13950485	13950618	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=exon:HG00140_ch_T0001049:16;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	13950485	13950618	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001049:12;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13950619	13961068	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=intron:HG00140_ch_T0001049:16;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13961069	13961156	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=exon:HG00140_ch_T0001049:17;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	13961069	13961156	.	+	2	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001049:13;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13961157	13963583	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=intron:HG00140_ch_T0001049:17;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13963584	13963926	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=exon:HG00140_ch_T0001049:18;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	13963584	13963926	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001049:14;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13963927	13965471	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=intron:HG00140_ch_T0001049:18;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13965472	13965567	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=exon:HG00140_ch_T0001049:19;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	13965472	13965567	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001049:15;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13965568	13966649	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=intron:HG00140_ch_T0001049:19;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13966650	13966861	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=exon:HG00140_ch_T0001049:20;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	13966650	13966861	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001049:16;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13966862	13968019	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=intron:HG00140_ch_T0001049:20;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13968020	13968260	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=exon:HG00140_ch_T0001049:21;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	13968020	13968260	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001049:17;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13968261	13968606	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=intron:HG00140_ch_T0001049:21;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13968607	13968756	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=exon:HG00140_ch_T0001049:22;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	13968607	13968756	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001049:18;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13968757	13969526	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=intron:HG00140_ch_T0001049:22;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13969527	13969647	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=exon:HG00140_ch_T0001049:23;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	13969527	13969647	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001049:19;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13969648	13976203	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=intron:HG00140_ch_T0001049:23;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13976204	13976334	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=exon:HG00140_ch_T0001049:24;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	13976204	13976334	.	+	2	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001049:20;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13976335	13976521	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=intron:HG00140_ch_T0001049:24;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13976522	13976800	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=exon:HG00140_ch_T0001049:25;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	13976522	13976800	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001049:21;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13976801	13980406	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=intron:HG00140_ch_T0001049:25;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13980407	13980532	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=exon:HG00140_ch_T0001049:26;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	13980407	13980532	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001049:22;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13980533	13981498	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=intron:HG00140_ch_T0001049:26;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13981499	13981624	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=exon:HG00140_ch_T0001049:27;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	13981499	13981624	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001049:23;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13981625	13983031	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=intron:HG00140_ch_T0001049:27;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13983032	13983201	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=exon:HG00140_ch_T0001049:28;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	13983032	13983201	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001049:24;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13983202	14000177	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=intron:HG00140_ch_T0001049:28;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14000178	14000286	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=exon:HG00140_ch_T0001049:29;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14000178	14000286	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001049:25;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14000287	14000670	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=intron:HG00140_ch_T0001049:29;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14000671	14000817	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=exon:HG00140_ch_T0001049:30;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14000671	14000817	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001049:26;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14000818	14001633	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=intron:HG00140_ch_T0001049:30;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14001634	14001780	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=exon:HG00140_ch_T0001049:31;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14001634	14001780	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001049:27;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14001781	14002828	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=intron:HG00140_ch_T0001049:31;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14002829	14003051	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=exon:HG00140_ch_T0001049:32;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14002829	14003051	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001049:28;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14003052	14006122	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=intron:HG00140_ch_T0001049:32;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14006123	14006343	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=exon:HG00140_ch_T0001049:33;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14006123	14006343	.	+	2	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001049:29;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14006344	14008418	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=intron:HG00140_ch_T0001049:33;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14008419	14008609	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=exon:HG00140_ch_T0001049:34;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14008419	14008609	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001049:30;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14008610	14023677	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=intron:HG00140_ch_T0001049:34;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14023678	14023851	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=exon:HG00140_ch_T0001049:35;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14023678	14023851	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001049:31;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14023852	14027900	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=intron:HG00140_ch_T0001049:35;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14027901	14028042	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=exon:HG00140_ch_T0001049:36;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14027901	14028042	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001049:32;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14028043	14029853	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=intron:HG00140_ch_T0001049:36;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14029854	14030604	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=exon:HG00140_ch_T0001049:37;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14029854	14030604	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001049:33;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14030605	14030999	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=intron:HG00140_ch_T0001049:37;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14031000	14031123	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=exon:HG00140_ch_T0001049:38;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14031000	14031123	.	+	2	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001049:34;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14031124	14032229	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=intron:HG00140_ch_T0001049:38;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14032230	14032455	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=exon:HG00140_ch_T0001049:39;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14032230	14032455	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001049:35;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14032456	14033053	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=intron:HG00140_ch_T0001049:39;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14033054	14033183	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=exon:HG00140_ch_T0001049:40;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14033054	14033183	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001049:36;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14033184	14036322	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=intron:HG00140_ch_T0001049:40;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14036323	14036508	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=exon:HG00140_ch_T0001049:41;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14036323	14036508	.	+	2	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001049:37;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14036509	14036922	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=intron:HG00140_ch_T0001049:41;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14036923	14037143	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=exon:HG00140_ch_T0001049:42;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14036923	14037143	.	+	2	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001049:38;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14037144	14037228	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=intron:HG00140_ch_T0001049:42;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14037229	14037317	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=exon:HG00140_ch_T0001049:43;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14037229	14037317	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001049:39;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14037318	14046329	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=intron:HG00140_ch_T0001049:43;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14046330	14046486	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=exon:HG00140_ch_T0001049:44;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14046330	14046486	.	+	1	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001049:40;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14046487	14046622	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=intron:HG00140_ch_T0001049:44;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14046623	14046835	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=exon:HG00140_ch_T0001049:45;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14046623	14046835	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001049:41;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14046836	14047555	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=intron:HG00140_ch_T0001049:45;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14047556	14047651	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=exon:HG00140_ch_T0001049:46;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14047556	14047651	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001049:42;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14047652	14049268	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=intron:HG00140_ch_T0001049:46;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14049269	14050792	.	+	.	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=exon:HG00140_ch_T0001049:47;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14049269	14049406	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001049:43;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	14049404	14049406	.	+	0	source_transcript=ENST00000651177.1;source_transcript_name=USP9Y-209;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000651177.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651177.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000651177.1,ENST00000651177.1;transcript_id=HG00140_ch_T0001049;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001049;transcript_name=HG00140_ch_T0001049;gene_name=USP9Y;ID=stop_codon:HG00140_ch_T0001049;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	13852536	13878253	1000	+	.	source_transcript=ENST00000417071.1;source_transcript_name=USP9Y-202;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000417071.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417071.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000417071.1,ENST00000417071.1;transcript_id=HG00140_ch_T0001050;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_G0000337;transcript_name=HG00140_ch_T0001050;gene_name=USP9Y;ID=HG00140_ch_T0001050;Name=USP9Y
HG00140_chrY	CAT	exon	13852536	13852705	.	+	.	source_transcript=ENST00000417071.1;source_transcript_name=USP9Y-202;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000417071.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417071.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000417071.1,ENST00000417071.1;transcript_id=HG00140_ch_T0001050;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001050;transcript_name=HG00140_ch_T0001050;gene_name=USP9Y;ID=exon:HG00140_ch_T0001050:0;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13852706	13854638	.	+	.	source_transcript=ENST00000417071.1;source_transcript_name=USP9Y-202;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000417071.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417071.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000417071.1,ENST00000417071.1;transcript_id=HG00140_ch_T0001050;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001050;transcript_name=HG00140_ch_T0001050;gene_name=USP9Y;ID=intron:HG00140_ch_T0001050:0;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13854639	13854685	.	+	.	source_transcript=ENST00000417071.1;source_transcript_name=USP9Y-202;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000417071.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417071.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000417071.1,ENST00000417071.1;transcript_id=HG00140_ch_T0001050;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001050;transcript_name=HG00140_ch_T0001050;gene_name=USP9Y;ID=exon:HG00140_ch_T0001050:1;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13854686	13876510	.	+	.	source_transcript=ENST00000417071.1;source_transcript_name=USP9Y-202;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000417071.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417071.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000417071.1,ENST00000417071.1;transcript_id=HG00140_ch_T0001050;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001050;transcript_name=HG00140_ch_T0001050;gene_name=USP9Y;ID=intron:HG00140_ch_T0001050:1;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13876511	13876604	.	+	.	source_transcript=ENST00000417071.1;source_transcript_name=USP9Y-202;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000417071.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417071.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000417071.1,ENST00000417071.1;transcript_id=HG00140_ch_T0001050;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001050;transcript_name=HG00140_ch_T0001050;gene_name=USP9Y;ID=exon:HG00140_ch_T0001050:2;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13876605	13877682	.	+	.	source_transcript=ENST00000417071.1;source_transcript_name=USP9Y-202;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000417071.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417071.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000417071.1,ENST00000417071.1;transcript_id=HG00140_ch_T0001050;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001050;transcript_name=HG00140_ch_T0001050;gene_name=USP9Y;ID=intron:HG00140_ch_T0001050:2;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13877683	13878253	.	+	.	source_transcript=ENST00000417071.1;source_transcript_name=USP9Y-202;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000417071.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417071.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000417071.1,ENST00000417071.1;transcript_id=HG00140_ch_T0001050;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001050;transcript_name=HG00140_ch_T0001050;gene_name=USP9Y;ID=exon:HG00140_ch_T0001050:3;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	13891229	14050829	100	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_G0000337;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=HG00140_ch_T0001051;Name=USP9Y
HG00140_chrY	CAT	exon	13891229	13892053	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=exon:HG00140_ch_T0001051:0;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13892054	13898635	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=intron:HG00140_ch_T0001051:0;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13898636	13898695	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=exon:HG00140_ch_T0001051:1;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13898696	13899389	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=intron:HG00140_ch_T0001051:1;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13899390	13899545	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=exon:HG00140_ch_T0001051:2;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	13899450	13899545	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001051:0;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	13899450	13899452	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=start_codon:HG00140_ch_T0001051;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13899546	13910590	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=intron:HG00140_ch_T0001051:2;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13910591	13910739	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=exon:HG00140_ch_T0001051:3;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	13910591	13910739	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001051:1;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13910740	13912108	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=intron:HG00140_ch_T0001051:3;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13912109	13912188	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=exon:HG00140_ch_T0001051:4;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	13912109	13912188	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001051:2;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13912189	13915113	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=intron:HG00140_ch_T0001051:4;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13915114	13915226	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=exon:HG00140_ch_T0001051:5;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	13915114	13915226	.	+	2	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001051:3;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13915227	13916575	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=intron:HG00140_ch_T0001051:5;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13916576	13916794	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=exon:HG00140_ch_T0001051:6;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	13916576	13916794	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001051:4;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13916795	13925612	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=intron:HG00140_ch_T0001051:6;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13925613	13925728	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=exon:HG00140_ch_T0001051:7;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	13925613	13925728	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001051:5;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13925729	13925998	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=intron:HG00140_ch_T0001051:7;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13925999	13926250	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=exon:HG00140_ch_T0001051:8;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	13925999	13926250	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001051:6;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13926251	13926411	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=intron:HG00140_ch_T0001051:8;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13926412	13926550	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=exon:HG00140_ch_T0001051:9;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	13926412	13926550	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001051:7;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13926551	13928157	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=intron:HG00140_ch_T0001051:9;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13928158	13928310	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=exon:HG00140_ch_T0001051:10;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	13928158	13928310	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001051:8;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13928311	13929525	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=intron:HG00140_ch_T0001051:10;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13929526	13929630	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=exon:HG00140_ch_T0001051:11;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	13929526	13929630	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001051:9;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13929631	13947192	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=intron:HG00140_ch_T0001051:11;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13947193	13947399	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=exon:HG00140_ch_T0001051:12;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	13947193	13947399	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001051:10;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13947400	13948506	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=intron:HG00140_ch_T0001051:12;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13948507	13948643	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=exon:HG00140_ch_T0001051:13;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	13948507	13948643	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001051:11;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13948644	13950484	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=intron:HG00140_ch_T0001051:13;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13950485	13950618	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=exon:HG00140_ch_T0001051:14;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	13950485	13950618	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001051:12;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13950619	13961068	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=intron:HG00140_ch_T0001051:14;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13961069	13961156	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=exon:HG00140_ch_T0001051:15;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	13961069	13961156	.	+	2	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001051:13;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13961157	13963583	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=intron:HG00140_ch_T0001051:15;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13963584	13963926	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=exon:HG00140_ch_T0001051:16;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	13963584	13963926	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001051:14;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13963927	13965471	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=intron:HG00140_ch_T0001051:16;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13965472	13965567	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=exon:HG00140_ch_T0001051:17;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	13965472	13965567	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001051:15;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13965568	13966649	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=intron:HG00140_ch_T0001051:17;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13966650	13966861	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=exon:HG00140_ch_T0001051:18;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	13966650	13966861	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001051:16;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13966862	13968019	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=intron:HG00140_ch_T0001051:18;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13968020	13968260	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=exon:HG00140_ch_T0001051:19;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	13968020	13968260	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001051:17;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13968261	13968606	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=intron:HG00140_ch_T0001051:19;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13968607	13968756	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=exon:HG00140_ch_T0001051:20;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	13968607	13968756	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001051:18;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13968757	13969526	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=intron:HG00140_ch_T0001051:20;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13969527	13969647	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=exon:HG00140_ch_T0001051:21;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	13969527	13969647	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001051:19;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13969648	13976203	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=intron:HG00140_ch_T0001051:21;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13976204	13976334	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=exon:HG00140_ch_T0001051:22;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	13976204	13976334	.	+	2	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001051:20;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13976335	13976521	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=intron:HG00140_ch_T0001051:22;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13976522	13976800	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=exon:HG00140_ch_T0001051:23;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	13976522	13976800	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001051:21;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13976801	13980406	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=intron:HG00140_ch_T0001051:23;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13980407	13980532	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=exon:HG00140_ch_T0001051:24;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	13980407	13980532	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001051:22;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13980533	13981498	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=intron:HG00140_ch_T0001051:24;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13981499	13981624	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=exon:HG00140_ch_T0001051:25;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	13981499	13981624	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001051:23;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13981625	13983031	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=intron:HG00140_ch_T0001051:25;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13983032	13983201	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=exon:HG00140_ch_T0001051:26;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	13983032	13983201	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001051:24;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13983202	14000177	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=intron:HG00140_ch_T0001051:26;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14000178	14000286	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=exon:HG00140_ch_T0001051:27;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14000178	14000286	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001051:25;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14000287	14000670	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=intron:HG00140_ch_T0001051:27;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14000671	14000817	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=exon:HG00140_ch_T0001051:28;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14000671	14000817	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001051:26;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14000818	14001633	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=intron:HG00140_ch_T0001051:28;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14001634	14001780	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=exon:HG00140_ch_T0001051:29;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14001634	14001780	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001051:27;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14001781	14002828	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=intron:HG00140_ch_T0001051:29;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14002829	14003051	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=exon:HG00140_ch_T0001051:30;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14002829	14003051	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001051:28;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14003052	14006122	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=intron:HG00140_ch_T0001051:30;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14006123	14006343	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=exon:HG00140_ch_T0001051:31;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14006123	14006343	.	+	2	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001051:29;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14006344	14008418	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=intron:HG00140_ch_T0001051:31;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14008419	14008609	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=exon:HG00140_ch_T0001051:32;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14008419	14008609	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001051:30;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14008610	14023677	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=intron:HG00140_ch_T0001051:32;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14023678	14023851	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=exon:HG00140_ch_T0001051:33;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14023678	14023851	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001051:31;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14023852	14027900	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=intron:HG00140_ch_T0001051:33;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14027901	14028042	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=exon:HG00140_ch_T0001051:34;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14027901	14028042	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001051:32;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14028043	14029853	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=intron:HG00140_ch_T0001051:34;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14029854	14030604	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=exon:HG00140_ch_T0001051:35;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14029854	14030604	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001051:33;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14030605	14030999	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=intron:HG00140_ch_T0001051:35;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14031000	14031123	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=exon:HG00140_ch_T0001051:36;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14031000	14031123	.	+	2	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001051:34;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14031124	14032229	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=intron:HG00140_ch_T0001051:36;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14032230	14032455	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=exon:HG00140_ch_T0001051:37;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14032230	14032455	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001051:35;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14032456	14033053	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=intron:HG00140_ch_T0001051:37;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14033054	14033183	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=exon:HG00140_ch_T0001051:38;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14033054	14033183	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001051:36;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14033184	14036322	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=intron:HG00140_ch_T0001051:38;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14036323	14036508	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=exon:HG00140_ch_T0001051:39;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14036323	14036508	.	+	2	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001051:37;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14036509	14036922	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=intron:HG00140_ch_T0001051:39;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14036923	14037143	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=exon:HG00140_ch_T0001051:40;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14036923	14037143	.	+	2	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001051:38;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14037144	14037228	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=intron:HG00140_ch_T0001051:40;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14037229	14037317	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=exon:HG00140_ch_T0001051:41;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14037229	14037317	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001051:39;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14037318	14046329	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=intron:HG00140_ch_T0001051:41;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14046330	14046486	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=exon:HG00140_ch_T0001051:42;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14046330	14046486	.	+	1	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001051:40;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14046487	14046622	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=intron:HG00140_ch_T0001051:42;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14046623	14046835	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=exon:HG00140_ch_T0001051:43;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14046623	14046835	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001051:41;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14046836	14047555	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=intron:HG00140_ch_T0001051:43;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14047556	14047651	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=exon:HG00140_ch_T0001051:44;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14047556	14047651	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001051:42;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14047652	14049268	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=intron:HG00140_ch_T0001051:44;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14049269	14050829	.	+	.	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=exon:HG00140_ch_T0001051:45;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14049269	14049406	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001051:43;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	14049404	14049406	.	+	0	source_transcript=ENST00000338981.7;source_transcript_name=USP9Y-201;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000338981.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000338981.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000338981.7,ENST00000338981.7;transcript_id=HG00140_ch_T0001051;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001051;transcript_name=HG00140_ch_T0001051;gene_name=USP9Y;ID=stop_codon:HG00140_ch_T0001051;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	13892038	13911205	1000	+	.	source_transcript=ENST00000493168.1;source_transcript_name=USP9Y-208;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493168.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000493168.1,ENST00000493168.1;transcript_id=HG00140_ch_T0001052;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_G0000337;transcript_name=HG00140_ch_T0001052;gene_name=USP9Y;ID=HG00140_ch_T0001052;Name=USP9Y
HG00140_chrY	CAT	exon	13892038	13892053	.	+	.	source_transcript=ENST00000493168.1;source_transcript_name=USP9Y-208;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493168.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000493168.1,ENST00000493168.1;transcript_id=HG00140_ch_T0001052;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001052;transcript_name=HG00140_ch_T0001052;gene_name=USP9Y;ID=exon:HG00140_ch_T0001052:0;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13892054	13899389	.	+	.	source_transcript=ENST00000493168.1;source_transcript_name=USP9Y-208;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493168.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000493168.1,ENST00000493168.1;transcript_id=HG00140_ch_T0001052;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001052;transcript_name=HG00140_ch_T0001052;gene_name=USP9Y;ID=intron:HG00140_ch_T0001052:0;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13899390	13899545	.	+	.	source_transcript=ENST00000493168.1;source_transcript_name=USP9Y-208;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493168.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000493168.1,ENST00000493168.1;transcript_id=HG00140_ch_T0001052;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001052;transcript_name=HG00140_ch_T0001052;gene_name=USP9Y;ID=exon:HG00140_ch_T0001052:1;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13899546	13910590	.	+	.	source_transcript=ENST00000493168.1;source_transcript_name=USP9Y-208;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493168.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000493168.1,ENST00000493168.1;transcript_id=HG00140_ch_T0001052;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001052;transcript_name=HG00140_ch_T0001052;gene_name=USP9Y;ID=intron:HG00140_ch_T0001052:1;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13910591	13911205	.	+	.	source_transcript=ENST00000493168.1;source_transcript_name=USP9Y-208;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493168.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000493168.1,ENST00000493168.1;transcript_id=HG00140_ch_T0001052;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001052;transcript_name=HG00140_ch_T0001052;gene_name=USP9Y;ID=exon:HG00140_ch_T0001052:2;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	13899438	14050829	1000	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_G0000337;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=HG00140_ch_T0001053;Name=USP9Y
HG00140_chrY	CAT	exon	13899438	13899545	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=exon:HG00140_ch_T0001053:0;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13899546	13910590	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=intron:HG00140_ch_T0001053:0;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13910591	13910739	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=exon:HG00140_ch_T0001053:1;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13910740	13912108	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=intron:HG00140_ch_T0001053:1;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13912109	13912188	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=exon:HG00140_ch_T0001053:2;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13912189	13915113	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=intron:HG00140_ch_T0001053:2;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13915114	13915226	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=exon:HG00140_ch_T0001053:3;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13915227	13916575	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=intron:HG00140_ch_T0001053:3;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13916576	13916794	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=exon:HG00140_ch_T0001053:4;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13916795	13925612	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=intron:HG00140_ch_T0001053:4;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13925613	13925728	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=exon:HG00140_ch_T0001053:5;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13925729	13925998	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=intron:HG00140_ch_T0001053:5;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13925999	13926250	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=exon:HG00140_ch_T0001053:6;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13926251	13926411	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=intron:HG00140_ch_T0001053:6;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13926412	13926550	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=exon:HG00140_ch_T0001053:7;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13926551	13928157	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=intron:HG00140_ch_T0001053:7;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13928158	13928310	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=exon:HG00140_ch_T0001053:8;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13928311	13929525	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=intron:HG00140_ch_T0001053:8;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13929526	13929630	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=exon:HG00140_ch_T0001053:9;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13929631	13947192	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=intron:HG00140_ch_T0001053:9;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13947193	13947399	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=exon:HG00140_ch_T0001053:10;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13947400	13948506	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=intron:HG00140_ch_T0001053:10;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13948507	13948643	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=exon:HG00140_ch_T0001053:11;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13948644	13950484	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=intron:HG00140_ch_T0001053:11;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13950485	13950618	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=exon:HG00140_ch_T0001053:12;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13950619	13961068	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=intron:HG00140_ch_T0001053:12;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13961069	13961156	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=exon:HG00140_ch_T0001053:13;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13961157	13963583	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=intron:HG00140_ch_T0001053:13;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13963584	13963926	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=exon:HG00140_ch_T0001053:14;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13963927	13965471	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=intron:HG00140_ch_T0001053:14;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13965472	13965567	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=exon:HG00140_ch_T0001053:15;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13965568	13966649	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=intron:HG00140_ch_T0001053:15;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13966650	13966861	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=exon:HG00140_ch_T0001053:16;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13966862	13968019	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=intron:HG00140_ch_T0001053:16;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13968020	13968260	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=exon:HG00140_ch_T0001053:17;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13968261	13968606	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=intron:HG00140_ch_T0001053:17;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13968607	13968756	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=exon:HG00140_ch_T0001053:18;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13968757	13969526	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=intron:HG00140_ch_T0001053:18;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13969527	13969647	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=exon:HG00140_ch_T0001053:19;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13969648	13976203	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=intron:HG00140_ch_T0001053:19;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13976204	13976334	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=exon:HG00140_ch_T0001053:20;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13976335	13976521	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=intron:HG00140_ch_T0001053:20;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13976522	13976800	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=exon:HG00140_ch_T0001053:21;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13976801	13980406	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=intron:HG00140_ch_T0001053:21;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13980407	13980532	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=exon:HG00140_ch_T0001053:22;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13980533	13981498	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=intron:HG00140_ch_T0001053:22;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13981499	13981624	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=exon:HG00140_ch_T0001053:23;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13981625	13983031	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=intron:HG00140_ch_T0001053:23;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13983032	13983201	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=exon:HG00140_ch_T0001053:24;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13983202	14000177	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=intron:HG00140_ch_T0001053:24;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14000178	14000286	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=exon:HG00140_ch_T0001053:25;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14000287	14000670	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=intron:HG00140_ch_T0001053:25;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14000671	14000817	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=exon:HG00140_ch_T0001053:26;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14000818	14001633	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=intron:HG00140_ch_T0001053:26;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14001634	14001780	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=exon:HG00140_ch_T0001053:27;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14001781	14002828	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=intron:HG00140_ch_T0001053:27;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14002829	14003051	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=exon:HG00140_ch_T0001053:28;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14003052	14006122	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=intron:HG00140_ch_T0001053:28;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14006123	14006343	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=exon:HG00140_ch_T0001053:29;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14006344	14008418	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=intron:HG00140_ch_T0001053:29;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14008419	14008609	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=exon:HG00140_ch_T0001053:30;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14008610	14023677	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=intron:HG00140_ch_T0001053:30;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14023678	14023851	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=exon:HG00140_ch_T0001053:31;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14023852	14027900	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=intron:HG00140_ch_T0001053:31;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14027901	14028042	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=exon:HG00140_ch_T0001053:32;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14028043	14029853	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=intron:HG00140_ch_T0001053:32;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14029854	14030604	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=exon:HG00140_ch_T0001053:33;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14030605	14030999	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=intron:HG00140_ch_T0001053:33;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14031000	14031123	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=exon:HG00140_ch_T0001053:34;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14031124	14032214	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=intron:HG00140_ch_T0001053:34;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14032215	14032455	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=exon:HG00140_ch_T0001053:35;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14032456	14033053	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=intron:HG00140_ch_T0001053:35;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14033054	14033183	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=exon:HG00140_ch_T0001053:36;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14033184	14036322	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=intron:HG00140_ch_T0001053:36;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14036323	14036508	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=exon:HG00140_ch_T0001053:37;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14036509	14036922	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=intron:HG00140_ch_T0001053:37;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14036923	14037143	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=exon:HG00140_ch_T0001053:38;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14037144	14037228	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=intron:HG00140_ch_T0001053:38;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14037229	14037317	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=exon:HG00140_ch_T0001053:39;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14037318	14046329	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=intron:HG00140_ch_T0001053:39;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14046330	14046486	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=exon:HG00140_ch_T0001053:40;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14046487	14046622	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=intron:HG00140_ch_T0001053:40;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14046623	14046835	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=exon:HG00140_ch_T0001053:41;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14046836	14047555	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=intron:HG00140_ch_T0001053:41;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14047556	14047651	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=exon:HG00140_ch_T0001053:42;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14047652	14049268	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=intron:HG00140_ch_T0001053:42;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14049269	14050829	.	+	.	source_transcript=ENST00000426564.6;source_transcript_name=USP9Y-203;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000426564.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426564.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000426564.6,ENST00000426564.6;transcript_id=HG00140_ch_T0001053;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001053;transcript_name=HG00140_ch_T0001053;gene_name=USP9Y;ID=exon:HG00140_ch_T0001053:43;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	14037035	14049602	100	+	.	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=HG00140_ch_T0001055;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_G0000337;transcript_name=HG00140_ch_T0001055;gene_name=USP9Y;ID=HG00140_ch_T0001055;Name=USP9Y
HG00140_chrY	CAT	exon	14037035	14037143	.	+	.	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=HG00140_ch_T0001055;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001055;transcript_name=HG00140_ch_T0001055;gene_name=USP9Y;ID=exon:HG00140_ch_T0001055:0;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14037035	14037143	.	+	2	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=HG00140_ch_T0001055;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001055;transcript_name=HG00140_ch_T0001055;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001055:0;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14037144	14046329	.	+	.	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=HG00140_ch_T0001055;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001055;transcript_name=HG00140_ch_T0001055;gene_name=USP9Y;ID=intron:HG00140_ch_T0001055:0;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14046330	14046486	.	+	.	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=HG00140_ch_T0001055;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001055;transcript_name=HG00140_ch_T0001055;gene_name=USP9Y;ID=exon:HG00140_ch_T0001055:1;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14046330	14046486	.	+	1	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=HG00140_ch_T0001055;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001055;transcript_name=HG00140_ch_T0001055;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001055:1;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14046487	14046622	.	+	.	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=HG00140_ch_T0001055;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001055;transcript_name=HG00140_ch_T0001055;gene_name=USP9Y;ID=intron:HG00140_ch_T0001055:1;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14046623	14046835	.	+	.	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=HG00140_ch_T0001055;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001055;transcript_name=HG00140_ch_T0001055;gene_name=USP9Y;ID=exon:HG00140_ch_T0001055:2;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14046623	14046835	.	+	0	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=HG00140_ch_T0001055;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001055;transcript_name=HG00140_ch_T0001055;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001055:2;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14046836	14047555	.	+	.	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=HG00140_ch_T0001055;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001055;transcript_name=HG00140_ch_T0001055;gene_name=USP9Y;ID=intron:HG00140_ch_T0001055:2;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14047556	14047651	.	+	.	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=HG00140_ch_T0001055;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001055;transcript_name=HG00140_ch_T0001055;gene_name=USP9Y;ID=exon:HG00140_ch_T0001055:3;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14047556	14047651	.	+	0	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=HG00140_ch_T0001055;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001055;transcript_name=HG00140_ch_T0001055;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001055:3;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14047652	14049268	.	+	.	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=HG00140_ch_T0001055;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001055;transcript_name=HG00140_ch_T0001055;gene_name=USP9Y;ID=intron:HG00140_ch_T0001055:3;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14049269	14049602	.	+	.	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=HG00140_ch_T0001055;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001055;transcript_name=HG00140_ch_T0001055;gene_name=USP9Y;ID=exon:HG00140_ch_T0001055:4;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14049269	14049406	.	+	0	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=HG00140_ch_T0001055;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001055;transcript_name=HG00140_ch_T0001055;gene_name=USP9Y;ID=CDS:HG00140_ch_T0001055:4;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	14049404	14049406	.	+	0	source_transcript=ENST00000453031.1;source_transcript_name=USP9Y-205;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000453031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453031.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000453031.1,ENST00000453031.1;transcript_id=HG00140_ch_T0001055;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001055;transcript_name=HG00140_ch_T0001055;gene_name=USP9Y;ID=stop_codon:HG00140_ch_T0001055;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	14046803	14050829	1000	+	.	source_transcript=ENST00000471409.1;source_transcript_name=USP9Y-207;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000471409.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000471409.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000471409.1,ENST00000471409.1;transcript_id=HG00140_ch_T0001056;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_G0000337;transcript_name=HG00140_ch_T0001056;gene_name=USP9Y;ID=HG00140_ch_T0001056;Name=USP9Y
HG00140_chrY	CAT	exon	14046803	14047651	.	+	.	source_transcript=ENST00000471409.1;source_transcript_name=USP9Y-207;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000471409.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000471409.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000471409.1,ENST00000471409.1;transcript_id=HG00140_ch_T0001056;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001056;transcript_name=HG00140_ch_T0001056;gene_name=USP9Y;ID=exon:HG00140_ch_T0001056:0;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14047652	14049268	.	+	.	source_transcript=ENST00000471409.1;source_transcript_name=USP9Y-207;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000471409.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000471409.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000471409.1,ENST00000471409.1;transcript_id=HG00140_ch_T0001056;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001056;transcript_name=HG00140_ch_T0001056;gene_name=USP9Y;ID=intron:HG00140_ch_T0001056:0;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14049269	14050829	.	+	.	source_transcript=ENST00000471409.1;source_transcript_name=USP9Y-207;source_gene=ENSG00000114374.13;source_gene_biotype=protein_coding;original_gene_id=ENSG00000114374.13;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000471409.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000471409.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=ENST00000471409.1,ENST00000471409.1;transcript_id=HG00140_ch_T0001056;gene_id=HG00140_ch_G0000337;Parent=HG00140_ch_T0001056;transcript_name=HG00140_ch_T0001056;gene_name=USP9Y;ID=exon:HG00140_ch_T0001056:1;Name=USP9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	13727771	13734881	.	+	.	source_gene_common_name=SHROOM2P1;source_gene=ENSG00000226863.1;alternative_source_transcripts=ENST00000434773.1,ENST00000434773.1;gene_id=HG00140_ch_G0000338;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=SHROOM2P1;gene_sources=liftoff;ID=HG00140_ch_G0000338;Name=SHROOM2P1
HG00140_chrY	CAT	transcript	13727771	13734881	1000	+	.	source_transcript=ENST00000434773.1;source_transcript_name=SHROOM2P1-201;source_gene=ENSG00000226863.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226863.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434773.1;transcript_score=299.95799999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHROOM2P1;alternative_source_transcripts=ENST00000434773.1,ENST00000434773.1;transcript_id=HG00140_ch_T0001041;gene_id=HG00140_ch_G0000338;Parent=HG00140_ch_G0000338;transcript_name=HG00140_ch_T0001041;gene_name=SHROOM2P1;ID=HG00140_ch_T0001041;Name=SHROOM2P1
HG00140_chrY	CAT	exon	13727771	13727899	.	+	.	source_transcript=ENST00000434773.1;source_transcript_name=SHROOM2P1-201;source_gene=ENSG00000226863.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226863.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434773.1;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHROOM2P1;alternative_source_transcripts=ENST00000434773.1,ENST00000434773.1;transcript_id=HG00140_ch_T0001041;gene_id=HG00140_ch_G0000338;Parent=HG00140_ch_T0001041;transcript_name=HG00140_ch_T0001041;gene_name=SHROOM2P1;ID=exon:HG00140_ch_T0001041:0;Name=SHROOM2P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13727900	13731057	.	+	.	source_transcript=ENST00000434773.1;source_transcript_name=SHROOM2P1-201;source_gene=ENSG00000226863.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226863.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434773.1;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHROOM2P1;alternative_source_transcripts=ENST00000434773.1,ENST00000434773.1;transcript_id=HG00140_ch_T0001041;gene_id=HG00140_ch_G0000338;Parent=HG00140_ch_T0001041;transcript_name=HG00140_ch_T0001041;gene_name=SHROOM2P1;ID=intron:HG00140_ch_T0001041:0;Name=SHROOM2P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13731058	13733212	.	+	.	source_transcript=ENST00000434773.1;source_transcript_name=SHROOM2P1-201;source_gene=ENSG00000226863.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226863.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434773.1;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHROOM2P1;alternative_source_transcripts=ENST00000434773.1,ENST00000434773.1;transcript_id=HG00140_ch_T0001041;gene_id=HG00140_ch_G0000338;Parent=HG00140_ch_T0001041;transcript_name=HG00140_ch_T0001041;gene_name=SHROOM2P1;ID=exon:HG00140_ch_T0001041:1;Name=SHROOM2P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13733213	13734781	.	+	.	source_transcript=ENST00000434773.1;source_transcript_name=SHROOM2P1-201;source_gene=ENSG00000226863.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226863.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434773.1;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHROOM2P1;alternative_source_transcripts=ENST00000434773.1,ENST00000434773.1;transcript_id=HG00140_ch_T0001041;gene_id=HG00140_ch_G0000338;Parent=HG00140_ch_T0001041;transcript_name=HG00140_ch_T0001041;gene_name=SHROOM2P1;ID=intron:HG00140_ch_T0001041:1;Name=SHROOM2P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13734782	13734881	.	+	.	source_transcript=ENST00000434773.1;source_transcript_name=SHROOM2P1-201;source_gene=ENSG00000226863.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226863.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434773.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434773.1;transcript_score=299.95799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHROOM2P1;alternative_source_transcripts=ENST00000434773.1,ENST00000434773.1;transcript_id=HG00140_ch_T0001041;gene_id=HG00140_ch_G0000338;Parent=HG00140_ch_T0001041;transcript_name=HG00140_ch_T0001041;gene_name=SHROOM2P1;ID=exon:HG00140_ch_T0001041:2;Name=SHROOM2P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	13808976	13824395	.	-	.	source_gene_common_name=MED14P1;source_gene=ENSG00000233774.1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;gene_id=HG00140_ch_G0000339;gene_biotype=unprocessed_pseudogene;gene_name=MED14P1;gene_sources=liftoff;ID=HG00140_ch_G0000339;Name=MED14P1
HG00140_chrY	CAT	transcript	13808976	13824395	1000	-	.	source_transcript=ENST00000430517.1;source_transcript_name=MED14P1-201;source_gene=ENSG00000233774.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233774.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430517.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430517.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED14P1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;transcript_id=HG00140_ch_T0001042;gene_id=HG00140_ch_G0000339;Parent=HG00140_ch_G0000339;transcript_name=HG00140_ch_T0001042;gene_name=MED14P1;ID=HG00140_ch_T0001042;Name=MED14P1
HG00140_chrY	CAT	exon	13808976	13809116	.	-	.	source_transcript=ENST00000430517.1;source_transcript_name=MED14P1-201;source_gene=ENSG00000233774.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233774.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430517.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430517.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED14P1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;transcript_id=HG00140_ch_T0001042;gene_id=HG00140_ch_G0000339;Parent=HG00140_ch_T0001042;transcript_name=HG00140_ch_T0001042;gene_name=MED14P1;ID=exon:HG00140_ch_T0001042:0;Name=MED14P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13809117	13809618	.	-	.	source_transcript=ENST00000430517.1;source_transcript_name=MED14P1-201;source_gene=ENSG00000233774.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233774.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430517.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430517.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED14P1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;transcript_id=HG00140_ch_T0001042;gene_id=HG00140_ch_G0000339;Parent=HG00140_ch_T0001042;transcript_name=HG00140_ch_T0001042;gene_name=MED14P1;ID=intron:HG00140_ch_T0001042:0;Name=MED14P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13809619	13809726	.	-	.	source_transcript=ENST00000430517.1;source_transcript_name=MED14P1-201;source_gene=ENSG00000233774.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233774.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430517.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430517.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED14P1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;transcript_id=HG00140_ch_T0001042;gene_id=HG00140_ch_G0000339;Parent=HG00140_ch_T0001042;transcript_name=HG00140_ch_T0001042;gene_name=MED14P1;ID=exon:HG00140_ch_T0001042:1;Name=MED14P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13809727	13810022	.	-	.	source_transcript=ENST00000430517.1;source_transcript_name=MED14P1-201;source_gene=ENSG00000233774.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233774.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430517.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430517.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED14P1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;transcript_id=HG00140_ch_T0001042;gene_id=HG00140_ch_G0000339;Parent=HG00140_ch_T0001042;transcript_name=HG00140_ch_T0001042;gene_name=MED14P1;ID=intron:HG00140_ch_T0001042:1;Name=MED14P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13810023	13810158	.	-	.	source_transcript=ENST00000430517.1;source_transcript_name=MED14P1-201;source_gene=ENSG00000233774.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233774.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430517.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430517.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED14P1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;transcript_id=HG00140_ch_T0001042;gene_id=HG00140_ch_G0000339;Parent=HG00140_ch_T0001042;transcript_name=HG00140_ch_T0001042;gene_name=MED14P1;ID=exon:HG00140_ch_T0001042:2;Name=MED14P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13810159	13822722	.	-	.	source_transcript=ENST00000430517.1;source_transcript_name=MED14P1-201;source_gene=ENSG00000233774.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233774.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430517.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430517.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED14P1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;transcript_id=HG00140_ch_T0001042;gene_id=HG00140_ch_G0000339;Parent=HG00140_ch_T0001042;transcript_name=HG00140_ch_T0001042;gene_name=MED14P1;ID=intron:HG00140_ch_T0001042:2;Name=MED14P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13822723	13822867	.	-	.	source_transcript=ENST00000430517.1;source_transcript_name=MED14P1-201;source_gene=ENSG00000233774.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233774.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430517.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430517.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED14P1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;transcript_id=HG00140_ch_T0001042;gene_id=HG00140_ch_G0000339;Parent=HG00140_ch_T0001042;transcript_name=HG00140_ch_T0001042;gene_name=MED14P1;ID=exon:HG00140_ch_T0001042:3;Name=MED14P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13822868	13824277	.	-	.	source_transcript=ENST00000430517.1;source_transcript_name=MED14P1-201;source_gene=ENSG00000233774.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233774.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430517.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430517.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED14P1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;transcript_id=HG00140_ch_T0001042;gene_id=HG00140_ch_G0000339;Parent=HG00140_ch_T0001042;transcript_name=HG00140_ch_T0001042;gene_name=MED14P1;ID=intron:HG00140_ch_T0001042:3;Name=MED14P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13824278	13824395	.	-	.	source_transcript=ENST00000430517.1;source_transcript_name=MED14P1-201;source_gene=ENSG00000233774.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233774.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430517.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430517.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED14P1;alternative_source_transcripts=ENST00000430517.1,ENST00000430517.1;transcript_id=HG00140_ch_T0001042;gene_id=HG00140_ch_G0000339;Parent=HG00140_ch_T0001042;transcript_name=HG00140_ch_T0001042;gene_name=MED14P1;ID=exon:HG00140_ch_T0001042:4;Name=MED14P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	13851308	13853539	.	-	.	source_gene_common_name=ENSG00000286009;source_gene=ENSG00000286009.3;alternative_source_transcripts=ENST00000652216.2,ENST00000652216.2;gene_id=HG00140_ch_G0000340;gene_biotype=lncRNA;gene_name=ENSG00000286009;gene_sources=liftoff;ID=HG00140_ch_G0000340;Name=ENSG00000286009
HG00140_chrY	CAT	transcript	13851308	13853534	1000	-	.	source_transcript=ENST00000652216.2;source_transcript_name=ENST00000652216;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652216.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000652216.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000652216.2,ENST00000652216.2;transcript_id=HG00140_ch_T0001043;gene_id=HG00140_ch_G0000340;Parent=HG00140_ch_G0000340;transcript_name=HG00140_ch_T0001043;gene_name=ENSG00000286009;ID=HG00140_ch_T0001043;Name=ENSG00000286009
HG00140_chrY	CAT	exon	13851308	13852120	.	-	.	source_transcript=ENST00000652216.2;source_transcript_name=ENST00000652216;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652216.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000652216.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000652216.2,ENST00000652216.2;transcript_id=HG00140_ch_T0001043;gene_id=HG00140_ch_G0000340;Parent=HG00140_ch_T0001043;transcript_name=HG00140_ch_T0001043;gene_name=ENSG00000286009;ID=exon:HG00140_ch_T0001043:0;Name=ENSG00000286009;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13852121	13852524	.	-	.	source_transcript=ENST00000652216.2;source_transcript_name=ENST00000652216;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652216.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000652216.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000652216.2,ENST00000652216.2;transcript_id=HG00140_ch_T0001043;gene_id=HG00140_ch_G0000340;Parent=HG00140_ch_T0001043;transcript_name=HG00140_ch_T0001043;gene_name=ENSG00000286009;ID=intron:HG00140_ch_T0001043:0;Name=ENSG00000286009;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13852525	13852750	.	-	.	source_transcript=ENST00000652216.2;source_transcript_name=ENST00000652216;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652216.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000652216.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000652216.2,ENST00000652216.2;transcript_id=HG00140_ch_T0001043;gene_id=HG00140_ch_G0000340;Parent=HG00140_ch_T0001043;transcript_name=HG00140_ch_T0001043;gene_name=ENSG00000286009;ID=exon:HG00140_ch_T0001043:1;Name=ENSG00000286009;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13852751	13853359	.	-	.	source_transcript=ENST00000652216.2;source_transcript_name=ENST00000652216;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652216.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000652216.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000652216.2,ENST00000652216.2;transcript_id=HG00140_ch_T0001043;gene_id=HG00140_ch_G0000340;Parent=HG00140_ch_T0001043;transcript_name=HG00140_ch_T0001043;gene_name=ENSG00000286009;ID=intron:HG00140_ch_T0001043:1;Name=ENSG00000286009;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13853360	13853534	.	-	.	source_transcript=ENST00000652216.2;source_transcript_name=ENST00000652216;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652216.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000652216.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000652216.2,ENST00000652216.2;transcript_id=HG00140_ch_T0001043;gene_id=HG00140_ch_G0000340;Parent=HG00140_ch_T0001043;transcript_name=HG00140_ch_T0001043;gene_name=ENSG00000286009;ID=exon:HG00140_ch_T0001043:2;Name=ENSG00000286009;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	13851311	13853505	1000	-	.	source_transcript=ENST00000662422.2;source_transcript_name=ENST00000662422;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662422.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000662422.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000662422.2,ENST00000662422.2;transcript_id=HG00140_ch_T0001044;gene_id=HG00140_ch_G0000340;Parent=HG00140_ch_G0000340;transcript_name=HG00140_ch_T0001044;gene_name=ENSG00000286009;ID=HG00140_ch_T0001044;Name=ENSG00000286009
HG00140_chrY	CAT	exon	13851311	13852123	.	-	.	source_transcript=ENST00000662422.2;source_transcript_name=ENST00000662422;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662422.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000662422.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000662422.2,ENST00000662422.2;transcript_id=HG00140_ch_T0001044;gene_id=HG00140_ch_G0000340;Parent=HG00140_ch_T0001044;transcript_name=HG00140_ch_T0001044;gene_name=ENSG00000286009;ID=exon:HG00140_ch_T0001044:0;Name=ENSG00000286009;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13852124	13852524	.	-	.	source_transcript=ENST00000662422.2;source_transcript_name=ENST00000662422;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662422.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000662422.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000662422.2,ENST00000662422.2;transcript_id=HG00140_ch_T0001044;gene_id=HG00140_ch_G0000340;Parent=HG00140_ch_T0001044;transcript_name=HG00140_ch_T0001044;gene_name=ENSG00000286009;ID=intron:HG00140_ch_T0001044:0;Name=ENSG00000286009;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13852525	13852750	.	-	.	source_transcript=ENST00000662422.2;source_transcript_name=ENST00000662422;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662422.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000662422.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000662422.2,ENST00000662422.2;transcript_id=HG00140_ch_T0001044;gene_id=HG00140_ch_G0000340;Parent=HG00140_ch_T0001044;transcript_name=HG00140_ch_T0001044;gene_name=ENSG00000286009;ID=exon:HG00140_ch_T0001044:1;Name=ENSG00000286009;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13852751	13853302	.	-	.	source_transcript=ENST00000662422.2;source_transcript_name=ENST00000662422;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662422.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000662422.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000662422.2,ENST00000662422.2;transcript_id=HG00140_ch_T0001044;gene_id=HG00140_ch_G0000340;Parent=HG00140_ch_T0001044;transcript_name=HG00140_ch_T0001044;gene_name=ENSG00000286009;ID=intron:HG00140_ch_T0001044:1;Name=ENSG00000286009;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13853303	13853505	.	-	.	source_transcript=ENST00000662422.2;source_transcript_name=ENST00000662422;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662422.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000662422.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000662422.2,ENST00000662422.2;transcript_id=HG00140_ch_T0001044;gene_id=HG00140_ch_G0000340;Parent=HG00140_ch_T0001044;transcript_name=HG00140_ch_T0001044;gene_name=ENSG00000286009;ID=exon:HG00140_ch_T0001044:2;Name=ENSG00000286009;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	13851314	13853473	1000	-	.	source_transcript=ENST00000651143.2;source_transcript_name=ENST00000651143;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651143.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651143.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000651143.2,ENST00000651143.2;transcript_id=HG00140_ch_T0001045;gene_id=HG00140_ch_G0000340;Parent=HG00140_ch_G0000340;transcript_name=HG00140_ch_T0001045;gene_name=ENSG00000286009;ID=HG00140_ch_T0001045;Name=ENSG00000286009
HG00140_chrY	CAT	exon	13851314	13852123	.	-	.	source_transcript=ENST00000651143.2;source_transcript_name=ENST00000651143;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651143.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651143.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000651143.2,ENST00000651143.2;transcript_id=HG00140_ch_T0001045;gene_id=HG00140_ch_G0000340;Parent=HG00140_ch_T0001045;transcript_name=HG00140_ch_T0001045;gene_name=ENSG00000286009;ID=exon:HG00140_ch_T0001045:0;Name=ENSG00000286009;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13852124	13852655	.	-	.	source_transcript=ENST00000651143.2;source_transcript_name=ENST00000651143;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651143.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651143.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000651143.2,ENST00000651143.2;transcript_id=HG00140_ch_T0001045;gene_id=HG00140_ch_G0000340;Parent=HG00140_ch_T0001045;transcript_name=HG00140_ch_T0001045;gene_name=ENSG00000286009;ID=intron:HG00140_ch_T0001045:0;Name=ENSG00000286009;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13852656	13852750	.	-	.	source_transcript=ENST00000651143.2;source_transcript_name=ENST00000651143;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651143.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651143.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000651143.2,ENST00000651143.2;transcript_id=HG00140_ch_T0001045;gene_id=HG00140_ch_G0000340;Parent=HG00140_ch_T0001045;transcript_name=HG00140_ch_T0001045;gene_name=ENSG00000286009;ID=exon:HG00140_ch_T0001045:1;Name=ENSG00000286009;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13852751	13853302	.	-	.	source_transcript=ENST00000651143.2;source_transcript_name=ENST00000651143;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651143.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651143.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000651143.2,ENST00000651143.2;transcript_id=HG00140_ch_T0001045;gene_id=HG00140_ch_G0000340;Parent=HG00140_ch_T0001045;transcript_name=HG00140_ch_T0001045;gene_name=ENSG00000286009;ID=intron:HG00140_ch_T0001045:1;Name=ENSG00000286009;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13853303	13853473	.	-	.	source_transcript=ENST00000651143.2;source_transcript_name=ENST00000651143;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651143.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651143.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000651143.2,ENST00000651143.2;transcript_id=HG00140_ch_T0001045;gene_id=HG00140_ch_G0000340;Parent=HG00140_ch_T0001045;transcript_name=HG00140_ch_T0001045;gene_name=ENSG00000286009;ID=exon:HG00140_ch_T0001045:2;Name=ENSG00000286009;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	13851314	13853477	1000	-	.	source_transcript=ENST00000656670.1;source_transcript_name=ENST00000656670;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000656670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000656670.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000656670.1,ENST00000656670.1;transcript_id=HG00140_ch_T0001046;gene_id=HG00140_ch_G0000340;Parent=HG00140_ch_G0000340;transcript_name=HG00140_ch_T0001046;gene_name=ENSG00000286009;ID=HG00140_ch_T0001046;Name=ENSG00000286009
HG00140_chrY	CAT	exon	13851314	13852123	.	-	.	source_transcript=ENST00000656670.1;source_transcript_name=ENST00000656670;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000656670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000656670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000656670.1,ENST00000656670.1;transcript_id=HG00140_ch_T0001046;gene_id=HG00140_ch_G0000340;Parent=HG00140_ch_T0001046;transcript_name=HG00140_ch_T0001046;gene_name=ENSG00000286009;ID=exon:HG00140_ch_T0001046:0;Name=ENSG00000286009;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13852124	13852655	.	-	.	source_transcript=ENST00000656670.1;source_transcript_name=ENST00000656670;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000656670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000656670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000656670.1,ENST00000656670.1;transcript_id=HG00140_ch_T0001046;gene_id=HG00140_ch_G0000340;Parent=HG00140_ch_T0001046;transcript_name=HG00140_ch_T0001046;gene_name=ENSG00000286009;ID=intron:HG00140_ch_T0001046:0;Name=ENSG00000286009;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13852656	13852750	.	-	.	source_transcript=ENST00000656670.1;source_transcript_name=ENST00000656670;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000656670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000656670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000656670.1,ENST00000656670.1;transcript_id=HG00140_ch_T0001046;gene_id=HG00140_ch_G0000340;Parent=HG00140_ch_T0001046;transcript_name=HG00140_ch_T0001046;gene_name=ENSG00000286009;ID=exon:HG00140_ch_T0001046:1;Name=ENSG00000286009;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13852751	13853359	.	-	.	source_transcript=ENST00000656670.1;source_transcript_name=ENST00000656670;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000656670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000656670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000656670.1,ENST00000656670.1;transcript_id=HG00140_ch_T0001046;gene_id=HG00140_ch_G0000340;Parent=HG00140_ch_T0001046;transcript_name=HG00140_ch_T0001046;gene_name=ENSG00000286009;ID=intron:HG00140_ch_T0001046:1;Name=ENSG00000286009;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13853360	13853477	.	-	.	source_transcript=ENST00000656670.1;source_transcript_name=ENST00000656670;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000656670.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000656670.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000656670.1,ENST00000656670.1;transcript_id=HG00140_ch_T0001046;gene_id=HG00140_ch_G0000340;Parent=HG00140_ch_T0001046;transcript_name=HG00140_ch_T0001046;gene_name=ENSG00000286009;ID=exon:HG00140_ch_T0001046:2;Name=ENSG00000286009;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	13851314	13853539	1000	-	.	source_transcript=ENST00000826919.1;source_transcript_name=ENST00000826919;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000826919.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000826919.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000826919.1,ENST00000826919.1;transcript_id=HG00140_ch_T0001047;gene_id=HG00140_ch_G0000340;Parent=HG00140_ch_G0000340;transcript_name=HG00140_ch_T0001047;gene_name=ENSG00000286009;ID=HG00140_ch_T0001047;Name=ENSG00000286009
HG00140_chrY	CAT	exon	13851314	13852123	.	-	.	source_transcript=ENST00000826919.1;source_transcript_name=ENST00000826919;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000826919.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000826919.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000826919.1,ENST00000826919.1;transcript_id=HG00140_ch_T0001047;gene_id=HG00140_ch_G0000340;Parent=HG00140_ch_T0001047;transcript_name=HG00140_ch_T0001047;gene_name=ENSG00000286009;ID=exon:HG00140_ch_T0001047:0;Name=ENSG00000286009;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13852124	13852524	.	-	.	source_transcript=ENST00000826919.1;source_transcript_name=ENST00000826919;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000826919.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000826919.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000826919.1,ENST00000826919.1;transcript_id=HG00140_ch_T0001047;gene_id=HG00140_ch_G0000340;Parent=HG00140_ch_T0001047;transcript_name=HG00140_ch_T0001047;gene_name=ENSG00000286009;ID=intron:HG00140_ch_T0001047:0;Name=ENSG00000286009;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13852525	13852750	.	-	.	source_transcript=ENST00000826919.1;source_transcript_name=ENST00000826919;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000826919.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000826919.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000826919.1,ENST00000826919.1;transcript_id=HG00140_ch_T0001047;gene_id=HG00140_ch_G0000340;Parent=HG00140_ch_T0001047;transcript_name=HG00140_ch_T0001047;gene_name=ENSG00000286009;ID=exon:HG00140_ch_T0001047:1;Name=ENSG00000286009;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13852751	13853359	.	-	.	source_transcript=ENST00000826919.1;source_transcript_name=ENST00000826919;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000826919.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000826919.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000826919.1,ENST00000826919.1;transcript_id=HG00140_ch_T0001047;gene_id=HG00140_ch_G0000340;Parent=HG00140_ch_T0001047;transcript_name=HG00140_ch_T0001047;gene_name=ENSG00000286009;ID=intron:HG00140_ch_T0001047:1;Name=ENSG00000286009;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13853360	13853539	.	-	.	source_transcript=ENST00000826919.1;source_transcript_name=ENST00000826919;source_gene=ENSG00000286009.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286009.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000826919.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000826919.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286009;alternative_source_transcripts=ENST00000826919.1,ENST00000826919.1;transcript_id=HG00140_ch_T0001047;gene_id=HG00140_ch_G0000340;Parent=HG00140_ch_T0001047;transcript_name=HG00140_ch_T0001047;gene_name=ENSG00000286009;ID=exon:HG00140_ch_T0001047:2;Name=ENSG00000286009;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	13991973	13993830	.	-	.	source_gene_common_name=CDY4P;source_gene=ENSG00000228411.1;alternative_source_transcripts=ENST00000418290.1,ENST00000418290.1;gene_id=HG00140_ch_G0000341;gene_biotype=processed_pseudogene;gene_name=CDY4P;gene_sources=liftoff;ID=HG00140_ch_G0000341;Name=CDY4P
HG00140_chrY	CAT	transcript	13991973	13993830	1000	-	.	source_transcript=ENST00000418290.1;source_transcript_name=CDY4P-201;source_gene=ENSG00000228411.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228411.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000418290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418290.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY4P;alternative_source_transcripts=ENST00000418290.1,ENST00000418290.1;transcript_id=HG00140_ch_T0001054;gene_id=HG00140_ch_G0000341;Parent=HG00140_ch_G0000341;transcript_name=HG00140_ch_T0001054;gene_name=CDY4P;ID=HG00140_ch_T0001054;Name=CDY4P
HG00140_chrY	CAT	exon	13991973	13992716	.	-	.	source_transcript=ENST00000418290.1;source_transcript_name=CDY4P-201;source_gene=ENSG00000228411.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228411.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000418290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418290.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY4P;alternative_source_transcripts=ENST00000418290.1,ENST00000418290.1;transcript_id=HG00140_ch_T0001054;gene_id=HG00140_ch_G0000341;Parent=HG00140_ch_T0001054;transcript_name=HG00140_ch_T0001054;gene_name=CDY4P;ID=exon:HG00140_ch_T0001054:0;Name=CDY4P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	13992717	13993061	.	-	.	source_transcript=ENST00000418290.1;source_transcript_name=CDY4P-201;source_gene=ENSG00000228411.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228411.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000418290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418290.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY4P;alternative_source_transcripts=ENST00000418290.1,ENST00000418290.1;transcript_id=HG00140_ch_T0001054;gene_id=HG00140_ch_G0000341;Parent=HG00140_ch_T0001054;transcript_name=HG00140_ch_T0001054;gene_name=CDY4P;ID=intron:HG00140_ch_T0001054:0;Name=CDY4P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	13993062	13993830	.	-	.	source_transcript=ENST00000418290.1;source_transcript_name=CDY4P-201;source_gene=ENSG00000228411.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228411.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000418290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418290.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY4P;alternative_source_transcripts=ENST00000418290.1,ENST00000418290.1;transcript_id=HG00140_ch_T0001054;gene_id=HG00140_ch_G0000341;Parent=HG00140_ch_T0001054;transcript_name=HG00140_ch_T0001054;gene_name=CDY4P;ID=exon:HG00140_ch_T0001054:1;Name=CDY4P;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	14094112	14110482	.	+	.	source_gene_common_name=DDX3Y;source_gene=ENSG00000067048.17;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;gene_id=HG00140_ch_G0000342;gene_biotype=protein_coding;gene_name=DDX3Y;gene_sources=liftoff;ID=HG00140_ch_G0000342;Name=DDX3Y
HG00140_chrY	CAT	transcript	14094112	14108543	100	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_G0000342;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=HG00140_ch_T0001057;Name=DDX3Y
HG00140_chrY	CAT	exon	14094112	14094418	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001057:0;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14094419	14094938	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001057:0;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14094939	14094985	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001057:1;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14094941	14094985	.	+	0	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=CDS:HG00140_ch_T0001057:0;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	14094941	14094943	.	+	0	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=start_codon:HG00140_ch_T0001057;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14094986	14097540	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001057:1;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14097541	14097598	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001057:2;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14097541	14097598	.	+	0	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=CDS:HG00140_ch_T0001057:1;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14097599	14099363	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001057:2;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14099364	14099411	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001057:3;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14099364	14099411	.	+	2	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=CDS:HG00140_ch_T0001057:2;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14099412	14101842	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001057:3;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14101843	14101972	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001057:4;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14101843	14101972	.	+	2	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=CDS:HG00140_ch_T0001057:3;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14101973	14102730	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001057:4;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14102731	14102886	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001057:5;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14102731	14102886	.	+	1	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=CDS:HG00140_ch_T0001057:4;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14102887	14102966	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001057:5;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14102967	14103066	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001057:6;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14102967	14103066	.	+	1	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=CDS:HG00140_ch_T0001057:5;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14103067	14103721	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001057:6;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14103722	14103857	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001057:7;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14103722	14103857	.	+	0	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=CDS:HG00140_ch_T0001057:6;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14103858	14104567	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001057:7;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14104568	14104653	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001057:8;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14104568	14104653	.	+	2	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=CDS:HG00140_ch_T0001057:7;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14104654	14104887	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001057:8;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14104888	14104986	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001057:9;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14104888	14104986	.	+	0	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=CDS:HG00140_ch_T0001057:8;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14104987	14105070	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001057:9;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14105071	14105231	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001057:10;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14105071	14105231	.	+	0	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=CDS:HG00140_ch_T0001057:9;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14105232	14105633	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001057:10;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14105634	14105778	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001057:11;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14105634	14105778	.	+	1	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=CDS:HG00140_ch_T0001057:10;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14105779	14105886	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001057:11;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14105887	14106031	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001057:12;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14105887	14106031	.	+	0	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=CDS:HG00140_ch_T0001057:11;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14106032	14106264	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001057:12;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14106265	14106446	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001057:13;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14106265	14106446	.	+	2	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=CDS:HG00140_ch_T0001057:12;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14106447	14106520	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001057:13;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14106521	14106638	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001057:14;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14106521	14106638	.	+	0	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=CDS:HG00140_ch_T0001057:13;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14106639	14106910	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001057:14;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14106911	14107064	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001057:15;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14106911	14107064	.	+	2	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=CDS:HG00140_ch_T0001057:14;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14107065	14107406	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001057:15;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14107407	14107546	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001057:16;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14107407	14107546	.	+	1	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=CDS:HG00140_ch_T0001057:15;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14107547	14108046	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001057:16;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14108047	14108543	.	+	.	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001057:17;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14108047	14108126	.	+	2	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=CDS:HG00140_ch_T0001057:16;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	14108124	14108126	.	+	0	source_transcript=ENST00000360160.8;source_transcript_name=DDX3Y-202;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000360160.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000360160.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000360160.8,ENST00000360160.8;transcript_id=HG00140_ch_T0001057;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001057;transcript_name=HG00140_ch_T0001057;gene_name=DDX3Y;ID=stop_codon:HG00140_ch_T0001057;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	14094122	14103857	100	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG00140_ch_T0001058;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_G0000342;transcript_name=HG00140_ch_T0001058;gene_name=DDX3Y;ID=HG00140_ch_T0001058;Name=DDX3Y
HG00140_chrY	CAT	exon	14094122	14094418	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG00140_ch_T0001058;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001058;transcript_name=HG00140_ch_T0001058;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001058:0;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14094419	14094861	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG00140_ch_T0001058;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001058;transcript_name=HG00140_ch_T0001058;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001058:0;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14094862	14094985	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG00140_ch_T0001058;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001058;transcript_name=HG00140_ch_T0001058;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001058:1;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14094941	14094985	.	+	0	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG00140_ch_T0001058;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001058;transcript_name=HG00140_ch_T0001058;gene_name=DDX3Y;ID=CDS:HG00140_ch_T0001058:0;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	14094941	14094943	.	+	0	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG00140_ch_T0001058;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001058;transcript_name=HG00140_ch_T0001058;gene_name=DDX3Y;ID=start_codon:HG00140_ch_T0001058;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14094986	14097540	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG00140_ch_T0001058;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001058;transcript_name=HG00140_ch_T0001058;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001058:1;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14097541	14097598	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG00140_ch_T0001058;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001058;transcript_name=HG00140_ch_T0001058;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001058:2;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14097541	14097598	.	+	0	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG00140_ch_T0001058;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001058;transcript_name=HG00140_ch_T0001058;gene_name=DDX3Y;ID=CDS:HG00140_ch_T0001058:1;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14097599	14099363	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG00140_ch_T0001058;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001058;transcript_name=HG00140_ch_T0001058;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001058:2;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14099364	14099411	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG00140_ch_T0001058;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001058;transcript_name=HG00140_ch_T0001058;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001058:3;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14099364	14099411	.	+	2	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG00140_ch_T0001058;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001058;transcript_name=HG00140_ch_T0001058;gene_name=DDX3Y;ID=CDS:HG00140_ch_T0001058:2;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14099412	14101842	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG00140_ch_T0001058;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001058;transcript_name=HG00140_ch_T0001058;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001058:3;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14101843	14101972	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG00140_ch_T0001058;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001058;transcript_name=HG00140_ch_T0001058;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001058:4;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14101843	14101972	.	+	2	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG00140_ch_T0001058;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001058;transcript_name=HG00140_ch_T0001058;gene_name=DDX3Y;ID=CDS:HG00140_ch_T0001058:3;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14101973	14102730	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG00140_ch_T0001058;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001058;transcript_name=HG00140_ch_T0001058;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001058:4;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14102731	14102886	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG00140_ch_T0001058;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001058;transcript_name=HG00140_ch_T0001058;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001058:5;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14102731	14102886	.	+	1	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG00140_ch_T0001058;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001058;transcript_name=HG00140_ch_T0001058;gene_name=DDX3Y;ID=CDS:HG00140_ch_T0001058:4;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14102887	14102966	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG00140_ch_T0001058;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001058;transcript_name=HG00140_ch_T0001058;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001058:5;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14102967	14103066	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG00140_ch_T0001058;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001058;transcript_name=HG00140_ch_T0001058;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001058:6;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14102967	14103066	.	+	1	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG00140_ch_T0001058;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001058;transcript_name=HG00140_ch_T0001058;gene_name=DDX3Y;ID=CDS:HG00140_ch_T0001058:5;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14103067	14103721	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG00140_ch_T0001058;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001058;transcript_name=HG00140_ch_T0001058;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001058:6;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14103722	14103857	.	+	.	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG00140_ch_T0001058;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001058;transcript_name=HG00140_ch_T0001058;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001058:7;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14103722	14103857	.	+	0	source_transcript=ENST00000454054.5;source_transcript_name=DDX3Y-204;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454054.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000454054.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000454054.5,ENST00000454054.5;transcript_id=HG00140_ch_T0001058;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001058;transcript_name=HG00140_ch_T0001058;gene_name=DDX3Y;ID=CDS:HG00140_ch_T0001058:6;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	14094853	14099700	1000	+	.	source_transcript=ENST00000493363.1;source_transcript_name=DDX3Y-208;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493363.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493363.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000493363.1,ENST00000493363.1;transcript_id=HG00140_ch_T0001059;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_G0000342;transcript_name=HG00140_ch_T0001059;gene_name=DDX3Y;ID=HG00140_ch_T0001059;Name=DDX3Y
HG00140_chrY	CAT	exon	14094853	14094985	.	+	.	source_transcript=ENST00000493363.1;source_transcript_name=DDX3Y-208;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493363.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493363.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000493363.1,ENST00000493363.1;transcript_id=HG00140_ch_T0001059;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001059;transcript_name=HG00140_ch_T0001059;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001059:0;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14094986	14097540	.	+	.	source_transcript=ENST00000493363.1;source_transcript_name=DDX3Y-208;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493363.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493363.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000493363.1,ENST00000493363.1;transcript_id=HG00140_ch_T0001059;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001059;transcript_name=HG00140_ch_T0001059;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001059:0;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14097541	14097598	.	+	.	source_transcript=ENST00000493363.1;source_transcript_name=DDX3Y-208;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493363.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493363.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000493363.1,ENST00000493363.1;transcript_id=HG00140_ch_T0001059;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001059;transcript_name=HG00140_ch_T0001059;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001059:1;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14097599	14099363	.	+	.	source_transcript=ENST00000493363.1;source_transcript_name=DDX3Y-208;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493363.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493363.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000493363.1,ENST00000493363.1;transcript_id=HG00140_ch_T0001059;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001059;transcript_name=HG00140_ch_T0001059;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001059:1;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14099364	14099700	.	+	.	source_transcript=ENST00000493363.1;source_transcript_name=DDX3Y-208;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000493363.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000493363.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000493363.1,ENST00000493363.1;transcript_id=HG00140_ch_T0001059;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001059;transcript_name=HG00140_ch_T0001059;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001059:2;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	14094872	14110482	100	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_G0000342;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=HG00140_ch_T0001060;Name=DDX3Y
HG00140_chrY	CAT	exon	14094872	14094985	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001060:0;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14094941	14094985	.	+	0	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=CDS:HG00140_ch_T0001060:0;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	14094941	14094943	.	+	0	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=start_codon:HG00140_ch_T0001060;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14094986	14097540	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001060:0;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14097541	14097598	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001060:1;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14097541	14097598	.	+	0	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=CDS:HG00140_ch_T0001060:1;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14097599	14099363	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001060:1;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14099364	14099411	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001060:2;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14099364	14099411	.	+	2	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=CDS:HG00140_ch_T0001060:2;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14099412	14101842	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001060:2;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14101843	14101972	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001060:3;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14101843	14101972	.	+	2	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=CDS:HG00140_ch_T0001060:3;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14101973	14102730	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001060:3;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14102731	14102886	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001060:4;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14102731	14102886	.	+	1	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=CDS:HG00140_ch_T0001060:4;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14102887	14102966	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001060:4;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14102967	14103066	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001060:5;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14102967	14103066	.	+	1	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=CDS:HG00140_ch_T0001060:5;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14103067	14103721	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001060:5;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14103722	14103857	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001060:6;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14103722	14103857	.	+	0	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=CDS:HG00140_ch_T0001060:6;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14103858	14104567	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001060:6;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14104568	14104653	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001060:7;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14104568	14104653	.	+	2	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=CDS:HG00140_ch_T0001060:7;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14104654	14104887	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001060:7;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14104888	14104986	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001060:8;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14104888	14104986	.	+	0	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=CDS:HG00140_ch_T0001060:8;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14104987	14105070	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001060:8;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14105071	14105231	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001060:9;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14105071	14105231	.	+	0	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=CDS:HG00140_ch_T0001060:9;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14105232	14105633	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001060:9;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14105634	14105778	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001060:10;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14105634	14105778	.	+	1	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=CDS:HG00140_ch_T0001060:10;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14105779	14105886	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001060:10;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14105887	14106031	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001060:11;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14105887	14106031	.	+	0	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=CDS:HG00140_ch_T0001060:11;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14106032	14106264	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001060:11;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14106265	14106446	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001060:12;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14106265	14106446	.	+	2	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=CDS:HG00140_ch_T0001060:12;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14106447	14106520	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001060:12;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14106521	14106638	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001060:13;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14106521	14106638	.	+	0	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=CDS:HG00140_ch_T0001060:13;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14106639	14106910	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001060:13;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14106911	14107064	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001060:14;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14106911	14107064	.	+	2	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=CDS:HG00140_ch_T0001060:14;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14107065	14107406	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001060:14;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14107407	14107546	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001060:15;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14107407	14107546	.	+	1	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=CDS:HG00140_ch_T0001060:15;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14107547	14108046	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001060:15;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14108047	14110482	.	+	.	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001060:16;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14108047	14108126	.	+	2	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=CDS:HG00140_ch_T0001060:16;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	14108124	14108126	.	+	0	source_transcript=ENST00000336079.8;source_transcript_name=DDX3Y-201;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000336079.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000336079.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000336079.8,ENST00000336079.8;transcript_id=HG00140_ch_T0001060;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001060;transcript_name=HG00140_ch_T0001060;gene_name=DDX3Y;ID=stop_codon:HG00140_ch_T0001060;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	14095742	14104653	100	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG00140_ch_T0001061;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_G0000342;transcript_name=HG00140_ch_T0001061;gene_name=DDX3Y;ID=HG00140_ch_T0001061;Name=DDX3Y
HG00140_chrY	CAT	exon	14095742	14095819	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG00140_ch_T0001061;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001061;transcript_name=HG00140_ch_T0001061;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001061:0;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14095784	14095819	.	+	0	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG00140_ch_T0001061;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001061;transcript_name=HG00140_ch_T0001061;gene_name=DDX3Y;ID=CDS:HG00140_ch_T0001061:0;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	14095784	14095786	.	+	0	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG00140_ch_T0001061;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001061;transcript_name=HG00140_ch_T0001061;gene_name=DDX3Y;ID=start_codon:HG00140_ch_T0001061;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14095820	14097540	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG00140_ch_T0001061;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001061;transcript_name=HG00140_ch_T0001061;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001061:0;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14097541	14097598	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG00140_ch_T0001061;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001061;transcript_name=HG00140_ch_T0001061;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001061:1;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14097541	14097598	.	+	0	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG00140_ch_T0001061;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001061;transcript_name=HG00140_ch_T0001061;gene_name=DDX3Y;ID=CDS:HG00140_ch_T0001061:1;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14097599	14099363	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG00140_ch_T0001061;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001061;transcript_name=HG00140_ch_T0001061;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001061:1;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14099364	14099411	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG00140_ch_T0001061;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001061;transcript_name=HG00140_ch_T0001061;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001061:2;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14099364	14099411	.	+	2	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG00140_ch_T0001061;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001061;transcript_name=HG00140_ch_T0001061;gene_name=DDX3Y;ID=CDS:HG00140_ch_T0001061:2;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14099412	14101842	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG00140_ch_T0001061;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001061;transcript_name=HG00140_ch_T0001061;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001061:2;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14101843	14101972	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG00140_ch_T0001061;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001061;transcript_name=HG00140_ch_T0001061;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001061:3;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14101843	14101972	.	+	2	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG00140_ch_T0001061;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001061;transcript_name=HG00140_ch_T0001061;gene_name=DDX3Y;ID=CDS:HG00140_ch_T0001061:3;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14101973	14102730	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG00140_ch_T0001061;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001061;transcript_name=HG00140_ch_T0001061;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001061:3;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14102731	14102886	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG00140_ch_T0001061;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001061;transcript_name=HG00140_ch_T0001061;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001061:4;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14102731	14102886	.	+	1	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG00140_ch_T0001061;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001061;transcript_name=HG00140_ch_T0001061;gene_name=DDX3Y;ID=CDS:HG00140_ch_T0001061:4;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14102887	14102966	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG00140_ch_T0001061;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001061;transcript_name=HG00140_ch_T0001061;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001061:4;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14102967	14103066	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG00140_ch_T0001061;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001061;transcript_name=HG00140_ch_T0001061;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001061:5;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14102967	14103066	.	+	1	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG00140_ch_T0001061;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001061;transcript_name=HG00140_ch_T0001061;gene_name=DDX3Y;ID=CDS:HG00140_ch_T0001061:5;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14103067	14103721	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG00140_ch_T0001061;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001061;transcript_name=HG00140_ch_T0001061;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001061:5;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14103722	14103857	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG00140_ch_T0001061;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001061;transcript_name=HG00140_ch_T0001061;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001061:6;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14103722	14103857	.	+	0	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG00140_ch_T0001061;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001061;transcript_name=HG00140_ch_T0001061;gene_name=DDX3Y;ID=CDS:HG00140_ch_T0001061:6;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14103858	14104567	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG00140_ch_T0001061;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001061;transcript_name=HG00140_ch_T0001061;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001061:6;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14104568	14104653	.	+	.	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG00140_ch_T0001061;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001061;transcript_name=HG00140_ch_T0001061;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001061:7;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14104568	14104653	.	+	2	source_transcript=ENST00000440554.1;source_transcript_name=DDX3Y-203;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440554.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000440554.1,ENST00000440554.1;transcript_id=HG00140_ch_T0001061;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001061;transcript_name=HG00140_ch_T0001061;gene_name=DDX3Y;ID=CDS:HG00140_ch_T0001061:7;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	14102644	14103805	1000	+	.	source_transcript=ENST00000469101.1;source_transcript_name=DDX3Y-206;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469101.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469101.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000469101.1,ENST00000469101.1;transcript_id=HG00140_ch_T0001062;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_G0000342;transcript_name=HG00140_ch_T0001062;gene_name=DDX3Y;ID=HG00140_ch_T0001062;Name=DDX3Y
HG00140_chrY	CAT	exon	14102644	14103066	.	+	.	source_transcript=ENST00000469101.1;source_transcript_name=DDX3Y-206;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469101.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469101.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000469101.1,ENST00000469101.1;transcript_id=HG00140_ch_T0001062;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001062;transcript_name=HG00140_ch_T0001062;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001062:0;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14103067	14103721	.	+	.	source_transcript=ENST00000469101.1;source_transcript_name=DDX3Y-206;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469101.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469101.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000469101.1,ENST00000469101.1;transcript_id=HG00140_ch_T0001062;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001062;transcript_name=HG00140_ch_T0001062;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001062:0;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14103722	14103805	.	+	.	source_transcript=ENST00000469101.1;source_transcript_name=DDX3Y-206;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000469101.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000469101.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000469101.1,ENST00000469101.1;transcript_id=HG00140_ch_T0001062;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001062;transcript_name=HG00140_ch_T0001062;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001062:1;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	14102967	14104903	1000	+	.	source_transcript=ENST00000472510.5;source_transcript_name=DDX3Y-207;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000472510.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472510.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000472510.5,ENST00000472510.5;transcript_id=HG00140_ch_T0001063;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_G0000342;transcript_name=HG00140_ch_T0001063;gene_name=DDX3Y;ID=HG00140_ch_T0001063;Name=DDX3Y
HG00140_chrY	CAT	exon	14102967	14103066	.	+	.	source_transcript=ENST00000472510.5;source_transcript_name=DDX3Y-207;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000472510.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472510.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000472510.5,ENST00000472510.5;transcript_id=HG00140_ch_T0001063;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001063;transcript_name=HG00140_ch_T0001063;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001063:0;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14103067	14103721	.	+	.	source_transcript=ENST00000472510.5;source_transcript_name=DDX3Y-207;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000472510.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472510.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000472510.5,ENST00000472510.5;transcript_id=HG00140_ch_T0001063;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001063;transcript_name=HG00140_ch_T0001063;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001063:0;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14103722	14103857	.	+	.	source_transcript=ENST00000472510.5;source_transcript_name=DDX3Y-207;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000472510.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472510.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000472510.5,ENST00000472510.5;transcript_id=HG00140_ch_T0001063;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001063;transcript_name=HG00140_ch_T0001063;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001063:1;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14103858	14104567	.	+	.	source_transcript=ENST00000472510.5;source_transcript_name=DDX3Y-207;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000472510.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472510.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000472510.5,ENST00000472510.5;transcript_id=HG00140_ch_T0001063;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001063;transcript_name=HG00140_ch_T0001063;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001063:1;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14104568	14104903	.	+	.	source_transcript=ENST00000472510.5;source_transcript_name=DDX3Y-207;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000472510.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472510.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000472510.5,ENST00000472510.5;transcript_id=HG00140_ch_T0001063;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001063;transcript_name=HG00140_ch_T0001063;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001063:2;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	14103012	14105231	1000	+	.	source_transcript=ENST00000463199.1;source_transcript_name=DDX3Y-205;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000463199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000463199.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000463199.1,ENST00000463199.1;transcript_id=HG00140_ch_T0001064;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_G0000342;transcript_name=HG00140_ch_T0001064;gene_name=DDX3Y;ID=HG00140_ch_T0001064;Name=DDX3Y
HG00140_chrY	CAT	exon	14103012	14103066	.	+	.	source_transcript=ENST00000463199.1;source_transcript_name=DDX3Y-205;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000463199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000463199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000463199.1,ENST00000463199.1;transcript_id=HG00140_ch_T0001064;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001064;transcript_name=HG00140_ch_T0001064;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001064:0;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14103067	14103721	.	+	.	source_transcript=ENST00000463199.1;source_transcript_name=DDX3Y-205;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000463199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000463199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000463199.1,ENST00000463199.1;transcript_id=HG00140_ch_T0001064;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001064;transcript_name=HG00140_ch_T0001064;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001064:0;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14103722	14103857	.	+	.	source_transcript=ENST00000463199.1;source_transcript_name=DDX3Y-205;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000463199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000463199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000463199.1,ENST00000463199.1;transcript_id=HG00140_ch_T0001064;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001064;transcript_name=HG00140_ch_T0001064;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001064:1;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14103858	14104567	.	+	.	source_transcript=ENST00000463199.1;source_transcript_name=DDX3Y-205;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000463199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000463199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000463199.1,ENST00000463199.1;transcript_id=HG00140_ch_T0001064;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001064;transcript_name=HG00140_ch_T0001064;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001064:1;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14104568	14104653	.	+	.	source_transcript=ENST00000463199.1;source_transcript_name=DDX3Y-205;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000463199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000463199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000463199.1,ENST00000463199.1;transcript_id=HG00140_ch_T0001064;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001064;transcript_name=HG00140_ch_T0001064;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001064:2;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14104654	14104887	.	+	.	source_transcript=ENST00000463199.1;source_transcript_name=DDX3Y-205;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000463199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000463199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000463199.1,ENST00000463199.1;transcript_id=HG00140_ch_T0001064;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001064;transcript_name=HG00140_ch_T0001064;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001064:2;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14104888	14105231	.	+	.	source_transcript=ENST00000463199.1;source_transcript_name=DDX3Y-205;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000463199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000463199.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000463199.1,ENST00000463199.1;transcript_id=HG00140_ch_T0001064;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001064;transcript_name=HG00140_ch_T0001064;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001064:3;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	14105500	14106357	1000	+	.	source_transcript=ENST00000495478.1;source_transcript_name=DDX3Y-209;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495478.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000495478.1,ENST00000495478.1;transcript_id=HG00140_ch_T0001065;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_G0000342;transcript_name=HG00140_ch_T0001065;gene_name=DDX3Y;ID=HG00140_ch_T0001065;Name=DDX3Y
HG00140_chrY	CAT	exon	14105500	14105778	.	+	.	source_transcript=ENST00000495478.1;source_transcript_name=DDX3Y-209;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000495478.1,ENST00000495478.1;transcript_id=HG00140_ch_T0001065;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001065;transcript_name=HG00140_ch_T0001065;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001065:0;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14105779	14105886	.	+	.	source_transcript=ENST00000495478.1;source_transcript_name=DDX3Y-209;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000495478.1,ENST00000495478.1;transcript_id=HG00140_ch_T0001065;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001065;transcript_name=HG00140_ch_T0001065;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001065:0;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14105887	14106031	.	+	.	source_transcript=ENST00000495478.1;source_transcript_name=DDX3Y-209;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000495478.1,ENST00000495478.1;transcript_id=HG00140_ch_T0001065;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001065;transcript_name=HG00140_ch_T0001065;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001065:1;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14106032	14106264	.	+	.	source_transcript=ENST00000495478.1;source_transcript_name=DDX3Y-209;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000495478.1,ENST00000495478.1;transcript_id=HG00140_ch_T0001065;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001065;transcript_name=HG00140_ch_T0001065;gene_name=DDX3Y;ID=intron:HG00140_ch_T0001065:1;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14106265	14106357	.	+	.	source_transcript=ENST00000495478.1;source_transcript_name=DDX3Y-209;source_gene=ENSG00000067048.17;source_gene_biotype=protein_coding;original_gene_id=ENSG00000067048.17;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000495478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000495478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=ENST00000495478.1,ENST00000495478.1;transcript_id=HG00140_ch_T0001065;gene_id=HG00140_ch_G0000342;Parent=HG00140_ch_T0001065;transcript_name=HG00140_ch_T0001065;gene_name=DDX3Y;ID=exon:HG00140_ch_T0001065:2;Name=DDX3Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	14120169	14138185	.	-	.	source_gene_common_name=CASKP1;source_gene=ENSG00000234059.1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;gene_id=HG00140_ch_G0000343;gene_biotype=unprocessed_pseudogene;gene_name=CASKP1;gene_sources=liftoff;ID=HG00140_ch_G0000343;Name=CASKP1
HG00140_chrY	CAT	transcript	14120169	14138185	1000	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=HG00140_ch_T0001066;gene_id=HG00140_ch_G0000343;Parent=HG00140_ch_G0000343;transcript_name=HG00140_ch_T0001066;gene_name=CASKP1;ID=HG00140_ch_T0001066;Name=CASKP1
HG00140_chrY	CAT	exon	14120169	14120331	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=HG00140_ch_T0001066;gene_id=HG00140_ch_G0000343;Parent=HG00140_ch_T0001066;transcript_name=HG00140_ch_T0001066;gene_name=CASKP1;ID=exon:HG00140_ch_T0001066:0;Name=CASKP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14120332	14125205	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=HG00140_ch_T0001066;gene_id=HG00140_ch_G0000343;Parent=HG00140_ch_T0001066;transcript_name=HG00140_ch_T0001066;gene_name=CASKP1;ID=intron:HG00140_ch_T0001066:0;Name=CASKP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14125206	14125290	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=HG00140_ch_T0001066;gene_id=HG00140_ch_G0000343;Parent=HG00140_ch_T0001066;transcript_name=HG00140_ch_T0001066;gene_name=CASKP1;ID=exon:HG00140_ch_T0001066:1;Name=CASKP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14125291	14135622	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=HG00140_ch_T0001066;gene_id=HG00140_ch_G0000343;Parent=HG00140_ch_T0001066;transcript_name=HG00140_ch_T0001066;gene_name=CASKP1;ID=intron:HG00140_ch_T0001066:1;Name=CASKP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14135623	14135666	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=HG00140_ch_T0001066;gene_id=HG00140_ch_G0000343;Parent=HG00140_ch_T0001066;transcript_name=HG00140_ch_T0001066;gene_name=CASKP1;ID=exon:HG00140_ch_T0001066:2;Name=CASKP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14135667	14135891	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=HG00140_ch_T0001066;gene_id=HG00140_ch_G0000343;Parent=HG00140_ch_T0001066;transcript_name=HG00140_ch_T0001066;gene_name=CASKP1;ID=intron:HG00140_ch_T0001066:2;Name=CASKP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14135892	14135926	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=HG00140_ch_T0001066;gene_id=HG00140_ch_G0000343;Parent=HG00140_ch_T0001066;transcript_name=HG00140_ch_T0001066;gene_name=CASKP1;ID=exon:HG00140_ch_T0001066:3;Name=CASKP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14135927	14136027	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=HG00140_ch_T0001066;gene_id=HG00140_ch_G0000343;Parent=HG00140_ch_T0001066;transcript_name=HG00140_ch_T0001066;gene_name=CASKP1;ID=intron:HG00140_ch_T0001066:3;Name=CASKP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14136028	14136075	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=HG00140_ch_T0001066;gene_id=HG00140_ch_G0000343;Parent=HG00140_ch_T0001066;transcript_name=HG00140_ch_T0001066;gene_name=CASKP1;ID=exon:HG00140_ch_T0001066:4;Name=CASKP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14136076	14136290	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=HG00140_ch_T0001066;gene_id=HG00140_ch_G0000343;Parent=HG00140_ch_T0001066;transcript_name=HG00140_ch_T0001066;gene_name=CASKP1;ID=intron:HG00140_ch_T0001066:4;Name=CASKP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14136291	14136310	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=HG00140_ch_T0001066;gene_id=HG00140_ch_G0000343;Parent=HG00140_ch_T0001066;transcript_name=HG00140_ch_T0001066;gene_name=CASKP1;ID=exon:HG00140_ch_T0001066:5;Name=CASKP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14136311	14137677	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=HG00140_ch_T0001066;gene_id=HG00140_ch_G0000343;Parent=HG00140_ch_T0001066;transcript_name=HG00140_ch_T0001066;gene_name=CASKP1;ID=intron:HG00140_ch_T0001066:5;Name=CASKP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14137678	14137781	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=HG00140_ch_T0001066;gene_id=HG00140_ch_G0000343;Parent=HG00140_ch_T0001066;transcript_name=HG00140_ch_T0001066;gene_name=CASKP1;ID=exon:HG00140_ch_T0001066:6;Name=CASKP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14137782	14138102	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=HG00140_ch_T0001066;gene_id=HG00140_ch_G0000343;Parent=HG00140_ch_T0001066;transcript_name=HG00140_ch_T0001066;gene_name=CASKP1;ID=intron:HG00140_ch_T0001066:6;Name=CASKP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14138103	14138185	.	-	.	source_transcript=ENST00000412870.1;source_transcript_name=CASKP1-201;source_gene=ENSG00000234059.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234059.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412870.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412870.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CASKP1;alternative_source_transcripts=ENST00000412870.1,ENST00000412870.1;transcript_id=HG00140_ch_T0001066;gene_id=HG00140_ch_G0000343;Parent=HG00140_ch_T0001066;transcript_name=HG00140_ch_T0001066;gene_name=CASKP1;ID=exon:HG00140_ch_T0001066:7;Name=CASKP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	14273793	14285807	.	+	.	source_gene_common_name=SFPQP1;source_gene=ENSG00000224035.1;alternative_source_transcripts=ENST00000446621.1,ENST00000446621.1;gene_id=HG00140_ch_G0000344;gene_biotype=processed_pseudogene;gene_name=SFPQP1;gene_sources=liftoff;ID=HG00140_ch_G0000344;Name=SFPQP1
HG00140_chrY	CAT	transcript	14273793	14285807	1000	+	.	source_transcript=ENST00000446621.1;source_transcript_name=SFPQP1-201;source_gene=ENSG00000224035.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224035.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000446621.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000446621.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SFPQP1;alternative_source_transcripts=ENST00000446621.1,ENST00000446621.1;transcript_id=HG00140_ch_T0001067;gene_id=HG00140_ch_G0000344;Parent=HG00140_ch_G0000344;transcript_name=HG00140_ch_T0001067;gene_name=SFPQP1;ID=HG00140_ch_T0001067;Name=SFPQP1
HG00140_chrY	CAT	exon	14273793	14274347	.	+	.	source_transcript=ENST00000446621.1;source_transcript_name=SFPQP1-201;source_gene=ENSG00000224035.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224035.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000446621.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000446621.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SFPQP1;alternative_source_transcripts=ENST00000446621.1,ENST00000446621.1;transcript_id=HG00140_ch_T0001067;gene_id=HG00140_ch_G0000344;Parent=HG00140_ch_T0001067;transcript_name=HG00140_ch_T0001067;gene_name=SFPQP1;ID=exon:HG00140_ch_T0001067:0;Name=SFPQP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14274348	14284576	.	+	.	source_transcript=ENST00000446621.1;source_transcript_name=SFPQP1-201;source_gene=ENSG00000224035.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224035.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000446621.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000446621.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SFPQP1;alternative_source_transcripts=ENST00000446621.1,ENST00000446621.1;transcript_id=HG00140_ch_T0001067;gene_id=HG00140_ch_G0000344;Parent=HG00140_ch_T0001067;transcript_name=HG00140_ch_T0001067;gene_name=SFPQP1;ID=intron:HG00140_ch_T0001067:0;Name=SFPQP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14284577	14285807	.	+	.	source_transcript=ENST00000446621.1;source_transcript_name=SFPQP1-201;source_gene=ENSG00000224035.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224035.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000446621.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000446621.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SFPQP1;alternative_source_transcripts=ENST00000446621.1,ENST00000446621.1;transcript_id=HG00140_ch_T0001067;gene_id=HG00140_ch_G0000344;Parent=HG00140_ch_T0001067;transcript_name=HG00140_ch_T0001067;gene_name=SFPQP1;ID=exon:HG00140_ch_T0001067:1;Name=SFPQP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	14343936	14352218	.	-	.	source_gene_common_name=TAB3P1;source_gene=ENSG00000235462.2;gene_id=HG00140_ch_G0000345;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TAB3P1;gene_sources=liftoff;ID=HG00140_ch_G0000345;Name=TAB3P1
HG00140_chrY	CAT	transcript	14343936	14352218	1000	-	.	source_transcript=ENST00000452645.1;source_transcript_name=TAB3P1-201;source_gene=ENSG00000235462.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235462.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000452645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452645.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAB3P1;transcript_id=HG00140_ch_T0001068;gene_id=HG00140_ch_G0000345;Parent=HG00140_ch_G0000345;transcript_name=HG00140_ch_T0001068;gene_name=TAB3P1;ID=HG00140_ch_T0001068;Name=TAB3P1
HG00140_chrY	CAT	exon	14343936	14344029	.	-	.	source_transcript=ENST00000452645.1;source_transcript_name=TAB3P1-201;source_gene=ENSG00000235462.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235462.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000452645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAB3P1;transcript_id=HG00140_ch_T0001068;gene_id=HG00140_ch_G0000345;Parent=HG00140_ch_T0001068;transcript_name=HG00140_ch_T0001068;gene_name=TAB3P1;ID=exon:HG00140_ch_T0001068:0;Name=TAB3P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14344030	14349959	.	-	.	source_transcript=ENST00000452645.1;source_transcript_name=TAB3P1-201;source_gene=ENSG00000235462.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235462.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000452645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAB3P1;transcript_id=HG00140_ch_T0001068;gene_id=HG00140_ch_G0000345;Parent=HG00140_ch_T0001068;transcript_name=HG00140_ch_T0001068;gene_name=TAB3P1;ID=intron:HG00140_ch_T0001068:0;Name=TAB3P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14349960	14350120	.	-	.	source_transcript=ENST00000452645.1;source_transcript_name=TAB3P1-201;source_gene=ENSG00000235462.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235462.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000452645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAB3P1;transcript_id=HG00140_ch_T0001068;gene_id=HG00140_ch_G0000345;Parent=HG00140_ch_T0001068;transcript_name=HG00140_ch_T0001068;gene_name=TAB3P1;ID=exon:HG00140_ch_T0001068:1;Name=TAB3P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14350121	14350839	.	-	.	source_transcript=ENST00000452645.1;source_transcript_name=TAB3P1-201;source_gene=ENSG00000235462.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235462.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000452645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAB3P1;transcript_id=HG00140_ch_T0001068;gene_id=HG00140_ch_G0000345;Parent=HG00140_ch_T0001068;transcript_name=HG00140_ch_T0001068;gene_name=TAB3P1;ID=intron:HG00140_ch_T0001068:1;Name=TAB3P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14350840	14352218	.	-	.	source_transcript=ENST00000452645.1;source_transcript_name=TAB3P1-201;source_gene=ENSG00000235462.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235462.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000452645.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAB3P1;transcript_id=HG00140_ch_T0001068;gene_id=HG00140_ch_G0000345;Parent=HG00140_ch_T0001068;transcript_name=HG00140_ch_T0001068;gene_name=TAB3P1;ID=exon:HG00140_ch_T0001068:2;Name=TAB3P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	14349277	14351553	.	-	.	source_gene_common_name=ENSG00000290852;source_gene=ENSG00000290852.1;gene_id=HG00140_ch_G0000346;gene_biotype=lncRNA;gene_name=ENSG00000290852;gene_sources=liftoff;ID=HG00140_ch_G0000346;Name=ENSG00000290852
HG00140_chrY	CAT	transcript	14349277	14351553	1000	-	.	source_transcript=ENST00000439217.1;source_transcript_name=ENST00000439217;source_gene=ENSG00000290852.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290852.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439217.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290852;transcript_id=HG00140_ch_T0001069;gene_id=HG00140_ch_G0000346;Parent=HG00140_ch_G0000346;transcript_name=HG00140_ch_T0001069;gene_name=ENSG00000290852;ID=HG00140_ch_T0001069;Name=ENSG00000290852
HG00140_chrY	CAT	exon	14349277	14349473	.	-	.	source_transcript=ENST00000439217.1;source_transcript_name=ENST00000439217;source_gene=ENSG00000290852.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290852.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290852;transcript_id=HG00140_ch_T0001069;gene_id=HG00140_ch_G0000346;Parent=HG00140_ch_T0001069;transcript_name=HG00140_ch_T0001069;gene_name=ENSG00000290852;ID=exon:HG00140_ch_T0001069:0;Name=ENSG00000290852;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14349474	14350897	.	-	.	source_transcript=ENST00000439217.1;source_transcript_name=ENST00000439217;source_gene=ENSG00000290852.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290852.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290852;transcript_id=HG00140_ch_T0001069;gene_id=HG00140_ch_G0000346;Parent=HG00140_ch_T0001069;transcript_name=HG00140_ch_T0001069;gene_name=ENSG00000290852;ID=intron:HG00140_ch_T0001069:0;Name=ENSG00000290852;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14350898	14351553	.	-	.	source_transcript=ENST00000439217.1;source_transcript_name=ENST00000439217;source_gene=ENSG00000290852.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290852.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290852;transcript_id=HG00140_ch_T0001069;gene_id=HG00140_ch_G0000346;Parent=HG00140_ch_T0001069;transcript_name=HG00140_ch_T0001069;gene_name=ENSG00000290852;ID=exon:HG00140_ch_T0001069:1;Name=ENSG00000290852;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	14420871	14421426	.	+	.	source_gene_common_name=DPPA2P1;source_gene=ENSG00000223915.1;alternative_source_transcripts=ENST00000428060.1,ENST00000428060.1;gene_id=HG00140_ch_G0000347;gene_biotype=processed_pseudogene;gene_name=DPPA2P1;gene_sources=liftoff;ID=HG00140_ch_G0000347;Name=DPPA2P1
HG00140_chrY	CAT	transcript	14420871	14421426	1000	+	.	source_transcript=ENST00000428060.1;source_transcript_name=DPPA2P1-201;source_gene=ENSG00000223915.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000223915.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428060.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DPPA2P1;alternative_source_transcripts=ENST00000428060.1,ENST00000428060.1;transcript_id=HG00140_ch_T0001070;gene_id=HG00140_ch_G0000347;Parent=HG00140_ch_G0000347;transcript_name=HG00140_ch_T0001070;gene_name=DPPA2P1;ID=HG00140_ch_T0001070;Name=DPPA2P1
HG00140_chrY	CAT	exon	14420871	14421426	.	+	.	source_transcript=ENST00000428060.1;source_transcript_name=DPPA2P1-201;source_gene=ENSG00000223915.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000223915.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428060.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DPPA2P1;alternative_source_transcripts=ENST00000428060.1,ENST00000428060.1;transcript_id=HG00140_ch_T0001070;gene_id=HG00140_ch_G0000347;Parent=HG00140_ch_T0001070;transcript_name=HG00140_ch_T0001070;gene_name=DPPA2P1;ID=exon:HG00140_ch_T0001070:0;Name=DPPA2P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	14424564	14670674	.	-	.	source_gene_common_name=UTY;source_gene=ENSG00000183878.16;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;gene_id=HG00140_ch_G0000348;gene_biotype=protein_coding;gene_name=UTY;gene_sources=liftoff,transMap;ID=HG00140_ch_G0000348;Name=UTY
HG00140_chrY	CAT	transcript	14424564	14669970	1000	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_G0000348;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=HG00140_ch_T0001071;Name=UTY
HG00140_chrY	CAT	exon	14424564	14424813	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=exon:HG00140_ch_T0001071:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14424564	14424813	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=CDS:HG00140_ch_T0001071:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14424814	14441003	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=intron:HG00140_ch_T0001071:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14441004	14441174	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=exon:HG00140_ch_T0001071:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14441004	14441174	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=CDS:HG00140_ch_T0001071:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14441175	14450264	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=intron:HG00140_ch_T0001071:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14450265	14450391	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=exon:HG00140_ch_T0001071:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14450265	14450391	.	-	1	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=CDS:HG00140_ch_T0001071:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14450392	14487693	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=intron:HG00140_ch_T0001071:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14487694	14487835	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=exon:HG00140_ch_T0001071:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14487694	14487835	.	-	2	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=CDS:HG00140_ch_T0001071:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14487836	14488943	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=intron:HG00140_ch_T0001071:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14488944	14489131	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=exon:HG00140_ch_T0001071:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14488944	14489131	.	-	1	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=CDS:HG00140_ch_T0001071:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14489132	14492863	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=intron:HG00140_ch_T0001071:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14492864	14492978	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=exon:HG00140_ch_T0001071:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14492864	14492978	.	-	2	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=CDS:HG00140_ch_T0001071:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14492979	14495385	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=intron:HG00140_ch_T0001071:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14495386	14495534	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=exon:HG00140_ch_T0001071:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14495386	14495534	.	-	1	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=CDS:HG00140_ch_T0001071:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14495535	14496024	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=intron:HG00140_ch_T0001071:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14496025	14496099	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=exon:HG00140_ch_T0001071:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14496025	14496099	.	-	1	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=CDS:HG00140_ch_T0001071:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14496100	14496172	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=intron:HG00140_ch_T0001071:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14496173	14496237	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=exon:HG00140_ch_T0001071:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14496173	14496237	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=CDS:HG00140_ch_T0001071:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14496238	14513543	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=intron:HG00140_ch_T0001071:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14513544	14513749	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=exon:HG00140_ch_T0001071:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14513544	14513749	.	-	2	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=CDS:HG00140_ch_T0001071:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14513750	14514589	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=intron:HG00140_ch_T0001071:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14514590	14514695	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=exon:HG00140_ch_T0001071:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14514590	14514695	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=CDS:HG00140_ch_T0001071:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14514696	14516209	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=intron:HG00140_ch_T0001071:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14516210	14516339	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=exon:HG00140_ch_T0001071:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14516210	14516339	.	-	1	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=CDS:HG00140_ch_T0001071:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14516340	14525551	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=intron:HG00140_ch_T0001071:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14525552	14526324	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=exon:HG00140_ch_T0001071:12;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14525552	14526324	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=CDS:HG00140_ch_T0001071:12;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14526325	14544991	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=intron:HG00140_ch_T0001071:12;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14544992	14545387	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=exon:HG00140_ch_T0001071:13;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14544992	14545387	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=CDS:HG00140_ch_T0001071:13;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14545388	14545911	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=intron:HG00140_ch_T0001071:13;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14545912	14546007	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=exon:HG00140_ch_T0001071:14;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14545912	14546007	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=CDS:HG00140_ch_T0001071:14;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14546008	14547865	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=intron:HG00140_ch_T0001071:14;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14547866	14547958	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=exon:HG00140_ch_T0001071:15;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14547866	14547958	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=CDS:HG00140_ch_T0001071:15;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14547959	14549755	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=intron:HG00140_ch_T0001071:15;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14549756	14549975	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=exon:HG00140_ch_T0001071:16;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14549756	14549975	.	-	1	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=CDS:HG00140_ch_T0001071:16;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14549976	14550418	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=intron:HG00140_ch_T0001071:16;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14550419	14550517	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=exon:HG00140_ch_T0001071:17;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14550419	14550517	.	-	1	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=CDS:HG00140_ch_T0001071:17;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14550518	14556255	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=intron:HG00140_ch_T0001071:17;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14556256	14556382	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=exon:HG00140_ch_T0001071:18;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14556256	14556382	.	-	2	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=CDS:HG00140_ch_T0001071:18;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14556383	14559244	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=intron:HG00140_ch_T0001071:18;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14559245	14559338	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=exon:HG00140_ch_T0001071:19;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14559245	14559338	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=CDS:HG00140_ch_T0001071:19;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14559339	14583847	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=intron:HG00140_ch_T0001071:19;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14583848	14583882	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=exon:HG00140_ch_T0001071:20;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14583848	14583882	.	-	2	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=CDS:HG00140_ch_T0001071:20;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14583883	14586906	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=intron:HG00140_ch_T0001071:20;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14586907	14586961	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=exon:HG00140_ch_T0001071:21;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14586907	14586961	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=CDS:HG00140_ch_T0001071:21;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14586962	14600981	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=intron:HG00140_ch_T0001071:21;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14600982	14601102	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=exon:HG00140_ch_T0001071:22;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14600982	14601102	.	-	1	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=CDS:HG00140_ch_T0001071:22;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14601103	14604723	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=intron:HG00140_ch_T0001071:22;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14604724	14604782	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=exon:HG00140_ch_T0001071:23;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14604724	14604782	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=CDS:HG00140_ch_T0001071:23;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14604783	14639017	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=intron:HG00140_ch_T0001071:23;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14639018	14639067	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=exon:HG00140_ch_T0001071:24;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14639018	14639067	.	-	2	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=CDS:HG00140_ch_T0001071:24;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14639068	14660121	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=intron:HG00140_ch_T0001071:24;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14660122	14660230	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=exon:HG00140_ch_T0001071:25;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14660122	14660230	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=CDS:HG00140_ch_T0001071:25;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14660231	14669254	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=intron:HG00140_ch_T0001071:25;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14669255	14669318	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=exon:HG00140_ch_T0001071:26;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14669255	14669318	.	-	1	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=CDS:HG00140_ch_T0001071:26;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14669319	14669514	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=intron:HG00140_ch_T0001071:26;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14669515	14669970	.	-	.	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=exon:HG00140_ch_T0001071:27;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14669515	14669666	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=CDS:HG00140_ch_T0001071:27;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	14669664	14669666	.	-	0	source_transcript=ENST00000682216.1;source_transcript_name=UTY-218;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682216.1,ENST00000682216.1;transcript_id=HG00140_ch_T0001071;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001071;transcript_name=HG00140_ch_T0001071;gene_name=UTY;ID=start_codon:HG00140_ch_T0001071;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	14424567	14549776	1000	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_G0000348;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=HG00140_ch_T0001072;Name=UTY
HG00140_chrY	CAT	exon	14424567	14424813	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=exon:HG00140_ch_T0001072:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14424567	14424813	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=CDS:HG00140_ch_T0001072:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14424814	14441003	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=intron:HG00140_ch_T0001072:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14441004	14441174	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=exon:HG00140_ch_T0001072:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14441004	14441174	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=CDS:HG00140_ch_T0001072:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14441175	14450264	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=intron:HG00140_ch_T0001072:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14450265	14450391	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=exon:HG00140_ch_T0001072:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14450265	14450391	.	-	1	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=CDS:HG00140_ch_T0001072:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14450392	14487693	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=intron:HG00140_ch_T0001072:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14487694	14487835	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=exon:HG00140_ch_T0001072:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14487694	14487835	.	-	2	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=CDS:HG00140_ch_T0001072:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14487836	14488943	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=intron:HG00140_ch_T0001072:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14488944	14489131	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=exon:HG00140_ch_T0001072:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14488944	14489131	.	-	1	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=CDS:HG00140_ch_T0001072:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14489132	14492863	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=intron:HG00140_ch_T0001072:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14492864	14492978	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=exon:HG00140_ch_T0001072:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14492864	14492978	.	-	2	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=CDS:HG00140_ch_T0001072:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14492979	14495385	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=intron:HG00140_ch_T0001072:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14495386	14495534	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=exon:HG00140_ch_T0001072:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14495386	14495534	.	-	1	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=CDS:HG00140_ch_T0001072:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14495535	14496024	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=intron:HG00140_ch_T0001072:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14496025	14496099	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=exon:HG00140_ch_T0001072:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14496025	14496099	.	-	1	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=CDS:HG00140_ch_T0001072:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14496100	14496172	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=intron:HG00140_ch_T0001072:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14496173	14496237	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=exon:HG00140_ch_T0001072:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14496173	14496237	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=CDS:HG00140_ch_T0001072:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14496238	14513543	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=intron:HG00140_ch_T0001072:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14513544	14513749	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=exon:HG00140_ch_T0001072:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14513544	14513749	.	-	2	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=CDS:HG00140_ch_T0001072:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14513750	14514589	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=intron:HG00140_ch_T0001072:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14514590	14514695	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=exon:HG00140_ch_T0001072:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14514590	14514695	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=CDS:HG00140_ch_T0001072:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14514696	14516209	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=intron:HG00140_ch_T0001072:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14516210	14516339	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=exon:HG00140_ch_T0001072:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14516210	14516339	.	-	1	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=CDS:HG00140_ch_T0001072:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14516340	14525551	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=intron:HG00140_ch_T0001072:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14525552	14526324	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=exon:HG00140_ch_T0001072:12;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14525552	14526324	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=CDS:HG00140_ch_T0001072:12;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14526325	14544991	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=intron:HG00140_ch_T0001072:12;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14544992	14545387	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=exon:HG00140_ch_T0001072:13;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14544992	14545387	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=CDS:HG00140_ch_T0001072:13;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14545388	14545911	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=intron:HG00140_ch_T0001072:13;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14545912	14546007	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=exon:HG00140_ch_T0001072:14;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14545912	14546007	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=CDS:HG00140_ch_T0001072:14;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14546008	14547865	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=intron:HG00140_ch_T0001072:14;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14547866	14547958	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=exon:HG00140_ch_T0001072:15;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14547866	14547958	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=CDS:HG00140_ch_T0001072:15;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14547959	14548452	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=intron:HG00140_ch_T0001072:15;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14548453	14548608	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=exon:HG00140_ch_T0001072:16;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14548453	14548608	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=CDS:HG00140_ch_T0001072:16;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14548609	14549076	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=intron:HG00140_ch_T0001072:16;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14549077	14549211	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=exon:HG00140_ch_T0001072:17;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14549077	14549211	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=CDS:HG00140_ch_T0001072:17;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14549212	14549755	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=intron:HG00140_ch_T0001072:17;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14549756	14549776	.	-	.	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=exon:HG00140_ch_T0001072:18;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14549756	14549776	.	-	0	source_transcript=ENST00000684226.1;source_transcript_name=UTY-221;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000684226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684226.1,ENST00000684226.1;transcript_id=HG00140_ch_T0001072;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001072;transcript_name=HG00140_ch_T0001072;gene_name=UTY;ID=CDS:HG00140_ch_T0001072:18;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	14424568	14435353	1000	-	.	source_transcript=ENST00000684326.1;source_transcript_name=UTY-222;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000684326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684326.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684326.1,ENST00000684326.1;transcript_id=HG00140_ch_T0001073;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_G0000348;transcript_name=HG00140_ch_T0001073;gene_name=UTY;ID=HG00140_ch_T0001073;Name=UTY
HG00140_chrY	CAT	exon	14424568	14424813	.	-	.	source_transcript=ENST00000684326.1;source_transcript_name=UTY-222;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000684326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684326.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684326.1,ENST00000684326.1;transcript_id=HG00140_ch_T0001073;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001073;transcript_name=HG00140_ch_T0001073;gene_name=UTY;ID=exon:HG00140_ch_T0001073:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14424814	14435201	.	-	.	source_transcript=ENST00000684326.1;source_transcript_name=UTY-222;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000684326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684326.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684326.1,ENST00000684326.1;transcript_id=HG00140_ch_T0001073;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001073;transcript_name=HG00140_ch_T0001073;gene_name=UTY;ID=intron:HG00140_ch_T0001073:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14435202	14435353	.	-	.	source_transcript=ENST00000684326.1;source_transcript_name=UTY-222;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000684326.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684326.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000684326.1,ENST00000684326.1;transcript_id=HG00140_ch_T0001073;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001073;transcript_name=HG00140_ch_T0001073;gene_name=UTY;ID=exon:HG00140_ch_T0001073:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	14424586	14670003	1000	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_G0000348;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=HG00140_ch_T0001074;Name=UTY
HG00140_chrY	CAT	exon	14424586	14424813	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=exon:HG00140_ch_T0001074:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14424814	14441003	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=intron:HG00140_ch_T0001074:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14441004	14441174	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=exon:HG00140_ch_T0001074:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14441175	14450264	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=intron:HG00140_ch_T0001074:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14450265	14450391	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=exon:HG00140_ch_T0001074:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14450392	14487693	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=intron:HG00140_ch_T0001074:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14487694	14487835	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=exon:HG00140_ch_T0001074:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14487836	14488943	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=intron:HG00140_ch_T0001074:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14488944	14489131	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=exon:HG00140_ch_T0001074:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14489132	14492863	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=intron:HG00140_ch_T0001074:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14492864	14492978	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=exon:HG00140_ch_T0001074:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14492979	14495385	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=intron:HG00140_ch_T0001074:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14495386	14495534	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=exon:HG00140_ch_T0001074:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14495535	14496024	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=intron:HG00140_ch_T0001074:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14496025	14496237	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=exon:HG00140_ch_T0001074:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14496238	14513543	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=intron:HG00140_ch_T0001074:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14513544	14513749	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=exon:HG00140_ch_T0001074:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14513750	14514589	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=intron:HG00140_ch_T0001074:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14514590	14514695	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=exon:HG00140_ch_T0001074:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14514696	14516209	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=intron:HG00140_ch_T0001074:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14516210	14516339	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=exon:HG00140_ch_T0001074:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14516340	14524206	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=intron:HG00140_ch_T0001074:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14524207	14524329	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=exon:HG00140_ch_T0001074:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14524209	14524329	.	-	1	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=CDS:HG00140_ch_T0001074:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	14524209	14524211	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=stop_codon:HG00140_ch_T0001074;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14524330	14525551	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=intron:HG00140_ch_T0001074:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14525552	14526324	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=exon:HG00140_ch_T0001074:12;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14525552	14526324	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=CDS:HG00140_ch_T0001074:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14526325	14544991	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=intron:HG00140_ch_T0001074:12;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14544992	14545387	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=exon:HG00140_ch_T0001074:13;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14544992	14545387	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=CDS:HG00140_ch_T0001074:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14545388	14545911	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=intron:HG00140_ch_T0001074:13;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14545912	14546007	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=exon:HG00140_ch_T0001074:14;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14545912	14546007	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=CDS:HG00140_ch_T0001074:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14546008	14547865	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=intron:HG00140_ch_T0001074:14;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14547866	14547958	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=exon:HG00140_ch_T0001074:15;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14547866	14547958	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=CDS:HG00140_ch_T0001074:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14547959	14549755	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=intron:HG00140_ch_T0001074:15;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14549756	14549975	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=exon:HG00140_ch_T0001074:16;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14549756	14549975	.	-	1	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=CDS:HG00140_ch_T0001074:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14549976	14550418	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=intron:HG00140_ch_T0001074:16;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14550419	14550517	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=exon:HG00140_ch_T0001074:17;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14550419	14550517	.	-	1	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=CDS:HG00140_ch_T0001074:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14550518	14556255	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=intron:HG00140_ch_T0001074:17;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14556256	14556382	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=exon:HG00140_ch_T0001074:18;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14556256	14556382	.	-	2	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=CDS:HG00140_ch_T0001074:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14556383	14559244	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=intron:HG00140_ch_T0001074:18;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14559245	14559338	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=exon:HG00140_ch_T0001074:19;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14559245	14559338	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=CDS:HG00140_ch_T0001074:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14559339	14583847	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=intron:HG00140_ch_T0001074:19;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14583848	14583882	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=exon:HG00140_ch_T0001074:20;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14583848	14583882	.	-	2	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=CDS:HG00140_ch_T0001074:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14583883	14586906	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=intron:HG00140_ch_T0001074:20;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14586907	14586961	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=exon:HG00140_ch_T0001074:21;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14586907	14586961	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=CDS:HG00140_ch_T0001074:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14586962	14600981	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=intron:HG00140_ch_T0001074:21;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14600982	14601102	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=exon:HG00140_ch_T0001074:22;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14600982	14601102	.	-	1	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=CDS:HG00140_ch_T0001074:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14601103	14604723	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=intron:HG00140_ch_T0001074:22;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14604724	14604782	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=exon:HG00140_ch_T0001074:23;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14604724	14604782	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=CDS:HG00140_ch_T0001074:12;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14604783	14639017	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=intron:HG00140_ch_T0001074:23;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14639018	14639067	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=exon:HG00140_ch_T0001074:24;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14639018	14639067	.	-	2	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=CDS:HG00140_ch_T0001074:13;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14639068	14660121	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=intron:HG00140_ch_T0001074:24;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14660122	14660230	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=exon:HG00140_ch_T0001074:25;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14660122	14660230	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=CDS:HG00140_ch_T0001074:14;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14660231	14669254	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=intron:HG00140_ch_T0001074:25;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14669255	14669318	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=exon:HG00140_ch_T0001074:26;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14669255	14669318	.	-	1	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=CDS:HG00140_ch_T0001074:15;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14669319	14669514	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=intron:HG00140_ch_T0001074:26;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14669515	14670003	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=exon:HG00140_ch_T0001074:27;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14669515	14669666	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=CDS:HG00140_ch_T0001074:16;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	14669664	14669666	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=transMap;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682112.1;transcript_id=HG00140_ch_T0001074;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001074;transcript_name=HG00140_ch_T0001074;gene_name=UTY;ID=start_codon:HG00140_ch_T0001074;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	14424586	14526118	1000	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00140_ch_T0001075;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_G0000348;transcript_name=HG00140_ch_T0001075;gene_name=UTY;ID=HG00140_ch_T0001075;Name=UTY
HG00140_chrY	CAT	exon	14424586	14424813	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00140_ch_T0001075;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001075;transcript_name=HG00140_ch_T0001075;gene_name=UTY;ID=exon:HG00140_ch_T0001075:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14424586	14424813	.	-	0	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00140_ch_T0001075;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001075;transcript_name=HG00140_ch_T0001075;gene_name=UTY;ID=CDS:HG00140_ch_T0001075:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14424814	14450264	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00140_ch_T0001075;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001075;transcript_name=HG00140_ch_T0001075;gene_name=UTY;ID=intron:HG00140_ch_T0001075:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14450265	14450391	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00140_ch_T0001075;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001075;transcript_name=HG00140_ch_T0001075;gene_name=UTY;ID=exon:HG00140_ch_T0001075:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14450265	14450391	.	-	1	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00140_ch_T0001075;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001075;transcript_name=HG00140_ch_T0001075;gene_name=UTY;ID=CDS:HG00140_ch_T0001075:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14450392	14487693	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00140_ch_T0001075;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001075;transcript_name=HG00140_ch_T0001075;gene_name=UTY;ID=intron:HG00140_ch_T0001075:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14487694	14487835	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00140_ch_T0001075;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001075;transcript_name=HG00140_ch_T0001075;gene_name=UTY;ID=exon:HG00140_ch_T0001075:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14487694	14487835	.	-	2	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00140_ch_T0001075;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001075;transcript_name=HG00140_ch_T0001075;gene_name=UTY;ID=CDS:HG00140_ch_T0001075:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14487836	14488943	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00140_ch_T0001075;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001075;transcript_name=HG00140_ch_T0001075;gene_name=UTY;ID=intron:HG00140_ch_T0001075:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14488944	14489131	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00140_ch_T0001075;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001075;transcript_name=HG00140_ch_T0001075;gene_name=UTY;ID=exon:HG00140_ch_T0001075:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14488944	14489131	.	-	1	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00140_ch_T0001075;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001075;transcript_name=HG00140_ch_T0001075;gene_name=UTY;ID=CDS:HG00140_ch_T0001075:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14489132	14492863	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00140_ch_T0001075;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001075;transcript_name=HG00140_ch_T0001075;gene_name=UTY;ID=intron:HG00140_ch_T0001075:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14492864	14492978	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00140_ch_T0001075;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001075;transcript_name=HG00140_ch_T0001075;gene_name=UTY;ID=exon:HG00140_ch_T0001075:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14492864	14492978	.	-	2	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00140_ch_T0001075;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001075;transcript_name=HG00140_ch_T0001075;gene_name=UTY;ID=CDS:HG00140_ch_T0001075:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14492979	14495385	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00140_ch_T0001075;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001075;transcript_name=HG00140_ch_T0001075;gene_name=UTY;ID=intron:HG00140_ch_T0001075:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14495386	14495534	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00140_ch_T0001075;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001075;transcript_name=HG00140_ch_T0001075;gene_name=UTY;ID=exon:HG00140_ch_T0001075:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14495386	14495534	.	-	1	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00140_ch_T0001075;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001075;transcript_name=HG00140_ch_T0001075;gene_name=UTY;ID=CDS:HG00140_ch_T0001075:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14495535	14496024	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00140_ch_T0001075;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001075;transcript_name=HG00140_ch_T0001075;gene_name=UTY;ID=intron:HG00140_ch_T0001075:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14496025	14496099	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00140_ch_T0001075;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001075;transcript_name=HG00140_ch_T0001075;gene_name=UTY;ID=exon:HG00140_ch_T0001075:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14496025	14496099	.	-	1	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00140_ch_T0001075;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001075;transcript_name=HG00140_ch_T0001075;gene_name=UTY;ID=CDS:HG00140_ch_T0001075:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14496100	14496172	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00140_ch_T0001075;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001075;transcript_name=HG00140_ch_T0001075;gene_name=UTY;ID=intron:HG00140_ch_T0001075:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14496173	14496237	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00140_ch_T0001075;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001075;transcript_name=HG00140_ch_T0001075;gene_name=UTY;ID=exon:HG00140_ch_T0001075:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14496173	14496237	.	-	0	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00140_ch_T0001075;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001075;transcript_name=HG00140_ch_T0001075;gene_name=UTY;ID=CDS:HG00140_ch_T0001075:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14496238	14513543	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00140_ch_T0001075;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001075;transcript_name=HG00140_ch_T0001075;gene_name=UTY;ID=intron:HG00140_ch_T0001075:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14513544	14513749	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00140_ch_T0001075;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001075;transcript_name=HG00140_ch_T0001075;gene_name=UTY;ID=exon:HG00140_ch_T0001075:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14513544	14513749	.	-	2	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00140_ch_T0001075;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001075;transcript_name=HG00140_ch_T0001075;gene_name=UTY;ID=CDS:HG00140_ch_T0001075:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14513750	14514589	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00140_ch_T0001075;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001075;transcript_name=HG00140_ch_T0001075;gene_name=UTY;ID=intron:HG00140_ch_T0001075:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14514590	14514695	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00140_ch_T0001075;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001075;transcript_name=HG00140_ch_T0001075;gene_name=UTY;ID=exon:HG00140_ch_T0001075:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14514590	14514695	.	-	0	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00140_ch_T0001075;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001075;transcript_name=HG00140_ch_T0001075;gene_name=UTY;ID=CDS:HG00140_ch_T0001075:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14514696	14516209	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00140_ch_T0001075;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001075;transcript_name=HG00140_ch_T0001075;gene_name=UTY;ID=intron:HG00140_ch_T0001075:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14516210	14516339	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00140_ch_T0001075;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001075;transcript_name=HG00140_ch_T0001075;gene_name=UTY;ID=exon:HG00140_ch_T0001075:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14516210	14516339	.	-	1	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00140_ch_T0001075;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001075;transcript_name=HG00140_ch_T0001075;gene_name=UTY;ID=CDS:HG00140_ch_T0001075:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14516340	14525551	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00140_ch_T0001075;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001075;transcript_name=HG00140_ch_T0001075;gene_name=UTY;ID=intron:HG00140_ch_T0001075:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14525552	14526118	.	-	.	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00140_ch_T0001075;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001075;transcript_name=HG00140_ch_T0001075;gene_name=UTY;ID=exon:HG00140_ch_T0001075:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14525552	14526118	.	-	1	source_transcript=ENST00000682761.1;source_transcript_name=UTY-219;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=non_stop_decay;alignment_id=ENST00000682761.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682761.1;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682761.1,ENST00000682761.1;transcript_id=HG00140_ch_T0001075;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001075;transcript_name=HG00140_ch_T0001075;gene_name=UTY;ID=CDS:HG00140_ch_T0001075:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	14424586	14670003	1000	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_G0000348;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=HG00140_ch_T0001076;Name=UTY
HG00140_chrY	CAT	exon	14424586	14424813	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=exon:HG00140_ch_T0001076:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14424814	14441003	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=intron:HG00140_ch_T0001076:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14441004	14441174	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=exon:HG00140_ch_T0001076:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14441175	14450264	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=intron:HG00140_ch_T0001076:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14450265	14450391	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=exon:HG00140_ch_T0001076:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14450392	14487693	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=intron:HG00140_ch_T0001076:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14487694	14487835	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=exon:HG00140_ch_T0001076:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14487836	14488943	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=intron:HG00140_ch_T0001076:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14488944	14489131	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=exon:HG00140_ch_T0001076:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14489132	14492863	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=intron:HG00140_ch_T0001076:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14492864	14492978	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=exon:HG00140_ch_T0001076:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14492979	14495385	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=intron:HG00140_ch_T0001076:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14495386	14495534	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=exon:HG00140_ch_T0001076:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14495535	14496024	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=intron:HG00140_ch_T0001076:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14496025	14496099	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=exon:HG00140_ch_T0001076:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14496100	14496172	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=intron:HG00140_ch_T0001076:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14496173	14496237	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=exon:HG00140_ch_T0001076:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14496238	14513543	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=intron:HG00140_ch_T0001076:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14513544	14513749	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=exon:HG00140_ch_T0001076:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14513750	14514589	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=intron:HG00140_ch_T0001076:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14514590	14514695	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=exon:HG00140_ch_T0001076:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14514696	14516209	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=intron:HG00140_ch_T0001076:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14516210	14516339	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=exon:HG00140_ch_T0001076:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14516340	14524206	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=intron:HG00140_ch_T0001076:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14524207	14524329	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=exon:HG00140_ch_T0001076:12;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14524209	14524329	.	-	1	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=CDS:HG00140_ch_T0001076:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	14524209	14524211	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=stop_codon:HG00140_ch_T0001076;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14524330	14525551	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=intron:HG00140_ch_T0001076:12;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14525552	14526324	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=exon:HG00140_ch_T0001076:13;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14525552	14526324	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=CDS:HG00140_ch_T0001076:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14526325	14544991	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=intron:HG00140_ch_T0001076:13;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14544992	14545387	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=exon:HG00140_ch_T0001076:14;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14544992	14545387	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=CDS:HG00140_ch_T0001076:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14545388	14545911	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=intron:HG00140_ch_T0001076:14;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14545912	14546007	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=exon:HG00140_ch_T0001076:15;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14545912	14546007	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=CDS:HG00140_ch_T0001076:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14546008	14547865	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=intron:HG00140_ch_T0001076:15;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14547866	14547958	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=exon:HG00140_ch_T0001076:16;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14547866	14547958	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=CDS:HG00140_ch_T0001076:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14547959	14549755	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=intron:HG00140_ch_T0001076:16;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14549756	14549975	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=exon:HG00140_ch_T0001076:17;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14549756	14549975	.	-	1	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=CDS:HG00140_ch_T0001076:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14549976	14550418	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=intron:HG00140_ch_T0001076:17;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14550419	14550517	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=exon:HG00140_ch_T0001076:18;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14550419	14550517	.	-	1	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=CDS:HG00140_ch_T0001076:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14550518	14556255	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=intron:HG00140_ch_T0001076:18;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14556256	14556382	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=exon:HG00140_ch_T0001076:19;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14556256	14556382	.	-	2	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=CDS:HG00140_ch_T0001076:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14556383	14559244	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=intron:HG00140_ch_T0001076:19;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14559245	14559338	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=exon:HG00140_ch_T0001076:20;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14559245	14559338	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=CDS:HG00140_ch_T0001076:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14559339	14583847	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=intron:HG00140_ch_T0001076:20;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14583848	14583882	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=exon:HG00140_ch_T0001076:21;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14583848	14583882	.	-	2	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=CDS:HG00140_ch_T0001076:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14583883	14586906	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=intron:HG00140_ch_T0001076:21;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14586907	14586961	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=exon:HG00140_ch_T0001076:22;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14586907	14586961	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=CDS:HG00140_ch_T0001076:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14586962	14600981	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=intron:HG00140_ch_T0001076:22;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14600982	14601102	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=exon:HG00140_ch_T0001076:23;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14600982	14601102	.	-	1	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=CDS:HG00140_ch_T0001076:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14601103	14604723	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=intron:HG00140_ch_T0001076:23;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14604724	14604782	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=exon:HG00140_ch_T0001076:24;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14604724	14604782	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=CDS:HG00140_ch_T0001076:12;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14604783	14639017	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=intron:HG00140_ch_T0001076:24;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14639018	14639067	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=exon:HG00140_ch_T0001076:25;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14639018	14639067	.	-	2	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=CDS:HG00140_ch_T0001076:13;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14639068	14660121	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=intron:HG00140_ch_T0001076:25;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14660122	14660230	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=exon:HG00140_ch_T0001076:26;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14660122	14660230	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=CDS:HG00140_ch_T0001076:14;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14660231	14669254	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=intron:HG00140_ch_T0001076:26;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14669255	14669318	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=exon:HG00140_ch_T0001076:27;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14669255	14669318	.	-	1	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=CDS:HG00140_ch_T0001076:15;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14669319	14669514	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=intron:HG00140_ch_T0001076:27;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14669515	14670003	.	-	.	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=exon:HG00140_ch_T0001076:28;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14669515	14669666	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=CDS:HG00140_ch_T0001076:16;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	14669664	14669666	.	-	0	source_transcript=ENST00000682112.1;source_transcript_name=UTY-217;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000682112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682112.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;transcript_id=HG00140_ch_T0001076;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001076;transcript_name=HG00140_ch_T0001076;gene_name=UTY;ID=start_codon:HG00140_ch_T0001076;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	14438366	14670674	100	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_G0000348;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=HG00140_ch_T0001077;Name=UTY
HG00140_chrY	CAT	exon	14438366	14439869	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=exon:HG00140_ch_T0001077:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14439843	14439869	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=CDS:HG00140_ch_T0001077:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	14439843	14439845	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=stop_codon:HG00140_ch_T0001077;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14439870	14441003	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=intron:HG00140_ch_T0001077:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14441004	14441174	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=exon:HG00140_ch_T0001077:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14441004	14441174	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=CDS:HG00140_ch_T0001077:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14441175	14450264	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=intron:HG00140_ch_T0001077:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14450265	14450391	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=exon:HG00140_ch_T0001077:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14450265	14450391	.	-	1	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=CDS:HG00140_ch_T0001077:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14450392	14487693	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=intron:HG00140_ch_T0001077:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14487694	14487835	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=exon:HG00140_ch_T0001077:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14487694	14487835	.	-	2	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=CDS:HG00140_ch_T0001077:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14487836	14488943	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=intron:HG00140_ch_T0001077:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14488944	14489131	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=exon:HG00140_ch_T0001077:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14488944	14489131	.	-	1	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=CDS:HG00140_ch_T0001077:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14489132	14492863	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=intron:HG00140_ch_T0001077:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14492864	14492978	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=exon:HG00140_ch_T0001077:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14492864	14492978	.	-	2	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=CDS:HG00140_ch_T0001077:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14492979	14495385	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=intron:HG00140_ch_T0001077:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14495386	14495534	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=exon:HG00140_ch_T0001077:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14495386	14495534	.	-	1	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=CDS:HG00140_ch_T0001077:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14495535	14496024	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=intron:HG00140_ch_T0001077:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14496025	14496099	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=exon:HG00140_ch_T0001077:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14496025	14496099	.	-	1	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=CDS:HG00140_ch_T0001077:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14496100	14496172	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=intron:HG00140_ch_T0001077:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14496173	14496237	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=exon:HG00140_ch_T0001077:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14496173	14496237	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=CDS:HG00140_ch_T0001077:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14496238	14513543	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=intron:HG00140_ch_T0001077:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14513544	14513749	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=exon:HG00140_ch_T0001077:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14513544	14513749	.	-	2	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=CDS:HG00140_ch_T0001077:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14513750	14514589	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=intron:HG00140_ch_T0001077:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14514590	14514695	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=exon:HG00140_ch_T0001077:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14514590	14514695	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=CDS:HG00140_ch_T0001077:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14514696	14516209	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=intron:HG00140_ch_T0001077:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14516210	14516339	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=exon:HG00140_ch_T0001077:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14516210	14516339	.	-	1	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=CDS:HG00140_ch_T0001077:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14516340	14525551	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=intron:HG00140_ch_T0001077:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14525552	14526324	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=exon:HG00140_ch_T0001077:12;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14525552	14526324	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=CDS:HG00140_ch_T0001077:12;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14526325	14544991	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=intron:HG00140_ch_T0001077:12;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14544992	14545387	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=exon:HG00140_ch_T0001077:13;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14544992	14545387	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=CDS:HG00140_ch_T0001077:13;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14545388	14545911	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=intron:HG00140_ch_T0001077:13;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14545912	14546007	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=exon:HG00140_ch_T0001077:14;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14545912	14546007	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=CDS:HG00140_ch_T0001077:14;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14546008	14547865	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=intron:HG00140_ch_T0001077:14;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14547866	14547958	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=exon:HG00140_ch_T0001077:15;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14547866	14547958	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=CDS:HG00140_ch_T0001077:15;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14547959	14549755	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=intron:HG00140_ch_T0001077:15;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14549756	14549975	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=exon:HG00140_ch_T0001077:16;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14549756	14549975	.	-	1	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=CDS:HG00140_ch_T0001077:16;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14549976	14550418	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=intron:HG00140_ch_T0001077:16;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14550419	14550517	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=exon:HG00140_ch_T0001077:17;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14550419	14550517	.	-	1	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=CDS:HG00140_ch_T0001077:17;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14550518	14556255	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=intron:HG00140_ch_T0001077:17;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14556256	14556382	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=exon:HG00140_ch_T0001077:18;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14556256	14556382	.	-	2	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=CDS:HG00140_ch_T0001077:18;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14556383	14559244	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=intron:HG00140_ch_T0001077:18;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14559245	14559338	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=exon:HG00140_ch_T0001077:19;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14559245	14559338	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=CDS:HG00140_ch_T0001077:19;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14559339	14583847	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=intron:HG00140_ch_T0001077:19;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14583848	14583882	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=exon:HG00140_ch_T0001077:20;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14583848	14583882	.	-	2	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=CDS:HG00140_ch_T0001077:20;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14583883	14586906	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=intron:HG00140_ch_T0001077:20;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14586907	14586961	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=exon:HG00140_ch_T0001077:21;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14586907	14586961	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=CDS:HG00140_ch_T0001077:21;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14586962	14600981	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=intron:HG00140_ch_T0001077:21;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14600982	14601102	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=exon:HG00140_ch_T0001077:22;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14600982	14601102	.	-	1	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=CDS:HG00140_ch_T0001077:22;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14601103	14604723	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=intron:HG00140_ch_T0001077:22;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14604724	14604782	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=exon:HG00140_ch_T0001077:23;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14604724	14604782	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=CDS:HG00140_ch_T0001077:23;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14604783	14639017	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=intron:HG00140_ch_T0001077:23;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14639018	14639067	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=exon:HG00140_ch_T0001077:24;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14639018	14639067	.	-	2	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=CDS:HG00140_ch_T0001077:24;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14639068	14660121	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=intron:HG00140_ch_T0001077:24;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14660122	14660230	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=exon:HG00140_ch_T0001077:25;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14660122	14660230	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=CDS:HG00140_ch_T0001077:25;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14660231	14669254	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=intron:HG00140_ch_T0001077:25;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14669255	14669318	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=exon:HG00140_ch_T0001077:26;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14669255	14669318	.	-	1	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=CDS:HG00140_ch_T0001077:26;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14669319	14669514	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=intron:HG00140_ch_T0001077:26;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14669515	14670674	.	-	.	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=exon:HG00140_ch_T0001077:27;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14669515	14669666	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=CDS:HG00140_ch_T0001077:27;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	14669664	14669666	.	-	0	source_transcript=ENST00000331397.8;source_transcript_name=UTY-202;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331397.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331397.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000331397.8,ENST00000331397.8;transcript_id=HG00140_ch_T0001077;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001077;transcript_name=HG00140_ch_T0001077;gene_name=UTY;ID=start_codon:HG00140_ch_T0001077;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	14438372	14670034	100	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_G0000348;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=HG00140_ch_T0001078;Name=UTY
HG00140_chrY	CAT	exon	14438372	14439869	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=exon:HG00140_ch_T0001078:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14439843	14439869	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=CDS:HG00140_ch_T0001078:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	14439843	14439845	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=stop_codon:HG00140_ch_T0001078;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14439870	14441003	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=intron:HG00140_ch_T0001078:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14441004	14441174	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=exon:HG00140_ch_T0001078:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14441004	14441174	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=CDS:HG00140_ch_T0001078:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14441175	14450264	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=intron:HG00140_ch_T0001078:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14450265	14450391	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=exon:HG00140_ch_T0001078:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14450265	14450391	.	-	1	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=CDS:HG00140_ch_T0001078:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14450392	14487693	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=intron:HG00140_ch_T0001078:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14487694	14487835	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=exon:HG00140_ch_T0001078:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14487694	14487835	.	-	2	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=CDS:HG00140_ch_T0001078:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14487836	14488943	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=intron:HG00140_ch_T0001078:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14488944	14489131	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=exon:HG00140_ch_T0001078:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14488944	14489131	.	-	1	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=CDS:HG00140_ch_T0001078:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14489132	14492863	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=intron:HG00140_ch_T0001078:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14492864	14492978	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=exon:HG00140_ch_T0001078:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14492864	14492978	.	-	2	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=CDS:HG00140_ch_T0001078:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14492979	14495385	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=intron:HG00140_ch_T0001078:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14495386	14495534	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=exon:HG00140_ch_T0001078:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14495386	14495534	.	-	1	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=CDS:HG00140_ch_T0001078:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14495535	14496024	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=intron:HG00140_ch_T0001078:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14496025	14496099	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=exon:HG00140_ch_T0001078:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14496025	14496099	.	-	1	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=CDS:HG00140_ch_T0001078:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14496100	14496172	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=intron:HG00140_ch_T0001078:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14496173	14496237	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=exon:HG00140_ch_T0001078:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14496173	14496237	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=CDS:HG00140_ch_T0001078:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14496238	14513543	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=intron:HG00140_ch_T0001078:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14513544	14513749	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=exon:HG00140_ch_T0001078:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14513544	14513749	.	-	2	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=CDS:HG00140_ch_T0001078:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14513750	14514589	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=intron:HG00140_ch_T0001078:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14514590	14514695	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=exon:HG00140_ch_T0001078:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14514590	14514695	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=CDS:HG00140_ch_T0001078:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14514696	14516209	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=intron:HG00140_ch_T0001078:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14516210	14516339	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=exon:HG00140_ch_T0001078:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14516210	14516339	.	-	1	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=CDS:HG00140_ch_T0001078:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14516340	14525551	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=intron:HG00140_ch_T0001078:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14525552	14526324	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=exon:HG00140_ch_T0001078:12;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14525552	14526324	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=CDS:HG00140_ch_T0001078:12;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14526325	14544991	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=intron:HG00140_ch_T0001078:12;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14544992	14545387	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=exon:HG00140_ch_T0001078:13;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14544992	14545387	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=CDS:HG00140_ch_T0001078:13;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14545388	14545911	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=intron:HG00140_ch_T0001078:13;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14545912	14546007	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=exon:HG00140_ch_T0001078:14;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14545912	14546007	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=CDS:HG00140_ch_T0001078:14;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14546008	14547865	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=intron:HG00140_ch_T0001078:14;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14547866	14547958	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=exon:HG00140_ch_T0001078:15;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14547866	14547958	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=CDS:HG00140_ch_T0001078:15;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14547959	14548452	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=intron:HG00140_ch_T0001078:15;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14548453	14548608	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=exon:HG00140_ch_T0001078:16;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14548453	14548608	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=CDS:HG00140_ch_T0001078:16;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14548609	14549076	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=intron:HG00140_ch_T0001078:16;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14549077	14549211	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=exon:HG00140_ch_T0001078:17;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14549077	14549211	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=CDS:HG00140_ch_T0001078:17;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14549212	14549755	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=intron:HG00140_ch_T0001078:17;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14549756	14549975	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=exon:HG00140_ch_T0001078:18;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14549756	14549975	.	-	1	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=CDS:HG00140_ch_T0001078:18;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14549976	14550418	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=intron:HG00140_ch_T0001078:18;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14550419	14550517	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=exon:HG00140_ch_T0001078:19;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14550419	14550517	.	-	1	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=CDS:HG00140_ch_T0001078:19;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14550518	14556255	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=intron:HG00140_ch_T0001078:19;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14556256	14556382	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=exon:HG00140_ch_T0001078:20;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14556256	14556382	.	-	2	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=CDS:HG00140_ch_T0001078:20;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14556383	14559244	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=intron:HG00140_ch_T0001078:20;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14559245	14559338	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=exon:HG00140_ch_T0001078:21;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14559245	14559338	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=CDS:HG00140_ch_T0001078:21;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14559339	14583847	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=intron:HG00140_ch_T0001078:21;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14583848	14583882	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=exon:HG00140_ch_T0001078:22;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14583848	14583882	.	-	2	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=CDS:HG00140_ch_T0001078:22;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14583883	14586906	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=intron:HG00140_ch_T0001078:22;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14586907	14586961	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=exon:HG00140_ch_T0001078:23;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14586907	14586961	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=CDS:HG00140_ch_T0001078:23;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14586962	14600981	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=intron:HG00140_ch_T0001078:23;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14600982	14601102	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=exon:HG00140_ch_T0001078:24;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14600982	14601102	.	-	1	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=CDS:HG00140_ch_T0001078:24;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14601103	14604723	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=intron:HG00140_ch_T0001078:24;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14604724	14604782	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=exon:HG00140_ch_T0001078:25;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14604724	14604782	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=CDS:HG00140_ch_T0001078:25;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14604783	14639017	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=intron:HG00140_ch_T0001078:25;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14639018	14639067	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=exon:HG00140_ch_T0001078:26;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14639018	14639067	.	-	2	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=CDS:HG00140_ch_T0001078:26;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14639068	14660121	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=intron:HG00140_ch_T0001078:26;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14660122	14660230	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=exon:HG00140_ch_T0001078:27;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14660122	14660230	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=CDS:HG00140_ch_T0001078:27;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14660231	14669254	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=intron:HG00140_ch_T0001078:27;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14669255	14669318	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=exon:HG00140_ch_T0001078:28;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14669255	14669318	.	-	1	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=CDS:HG00140_ch_T0001078:28;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14669319	14669514	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=intron:HG00140_ch_T0001078:28;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14669515	14670034	.	-	.	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=exon:HG00140_ch_T0001078:29;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14669515	14669666	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=CDS:HG00140_ch_T0001078:29;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	14669664	14669666	.	-	0	source_transcript=ENST00000545955.6;source_transcript_name=UTY-212;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000545955.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000545955.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000545955.6,ENST00000545955.6;transcript_id=HG00140_ch_T0001078;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001078;transcript_name=HG00140_ch_T0001078;gene_name=UTY;ID=start_codon:HG00140_ch_T0001078;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	14439129	14669992	100	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_G0000348;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=HG00140_ch_T0001079;Name=UTY
HG00140_chrY	CAT	exon	14439129	14439799	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=exon:HG00140_ch_T0001079:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14439773	14439799	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=CDS:HG00140_ch_T0001079:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	14439773	14439775	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=stop_codon:HG00140_ch_T0001079;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14439800	14441003	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=intron:HG00140_ch_T0001079:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14441004	14441174	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=exon:HG00140_ch_T0001079:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14441004	14441174	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=CDS:HG00140_ch_T0001079:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14441175	14450264	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=intron:HG00140_ch_T0001079:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14450265	14450391	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=exon:HG00140_ch_T0001079:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14450265	14450391	.	-	1	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=CDS:HG00140_ch_T0001079:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14450392	14487693	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=intron:HG00140_ch_T0001079:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14487694	14487835	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=exon:HG00140_ch_T0001079:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14487694	14487835	.	-	2	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=CDS:HG00140_ch_T0001079:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14487836	14488943	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=intron:HG00140_ch_T0001079:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14488944	14489131	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=exon:HG00140_ch_T0001079:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14488944	14489131	.	-	1	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=CDS:HG00140_ch_T0001079:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14489132	14492863	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=intron:HG00140_ch_T0001079:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14492864	14492978	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=exon:HG00140_ch_T0001079:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14492864	14492978	.	-	2	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=CDS:HG00140_ch_T0001079:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14492979	14495385	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=intron:HG00140_ch_T0001079:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14495386	14495534	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=exon:HG00140_ch_T0001079:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14495386	14495534	.	-	1	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=CDS:HG00140_ch_T0001079:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14495535	14496024	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=intron:HG00140_ch_T0001079:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14496025	14496099	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=exon:HG00140_ch_T0001079:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14496025	14496099	.	-	1	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=CDS:HG00140_ch_T0001079:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14496100	14496172	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=intron:HG00140_ch_T0001079:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14496173	14496237	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=exon:HG00140_ch_T0001079:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14496173	14496237	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=CDS:HG00140_ch_T0001079:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14496238	14513543	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=intron:HG00140_ch_T0001079:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14513544	14513749	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=exon:HG00140_ch_T0001079:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14513544	14513749	.	-	2	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=CDS:HG00140_ch_T0001079:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14513750	14514589	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=intron:HG00140_ch_T0001079:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14514590	14514695	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=exon:HG00140_ch_T0001079:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14514590	14514695	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=CDS:HG00140_ch_T0001079:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14514696	14516209	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=intron:HG00140_ch_T0001079:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14516210	14516339	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=exon:HG00140_ch_T0001079:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14516210	14516339	.	-	1	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=CDS:HG00140_ch_T0001079:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14516340	14525551	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=intron:HG00140_ch_T0001079:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14525552	14526324	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=exon:HG00140_ch_T0001079:12;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14525552	14526324	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=CDS:HG00140_ch_T0001079:12;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14526325	14544991	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=intron:HG00140_ch_T0001079:12;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14544992	14545387	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=exon:HG00140_ch_T0001079:13;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14544992	14545387	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=CDS:HG00140_ch_T0001079:13;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14545388	14545911	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=intron:HG00140_ch_T0001079:13;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14545912	14546007	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=exon:HG00140_ch_T0001079:14;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14545912	14546007	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=CDS:HG00140_ch_T0001079:14;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14546008	14547865	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=intron:HG00140_ch_T0001079:14;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14547866	14547958	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=exon:HG00140_ch_T0001079:15;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14547866	14547958	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=CDS:HG00140_ch_T0001079:15;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14547959	14548452	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=intron:HG00140_ch_T0001079:15;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14548453	14548542	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=exon:HG00140_ch_T0001079:16;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14548453	14548542	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=CDS:HG00140_ch_T0001079:16;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14548543	14549076	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=intron:HG00140_ch_T0001079:16;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14549077	14549211	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=exon:HG00140_ch_T0001079:17;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14549077	14549211	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=CDS:HG00140_ch_T0001079:17;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14549212	14549755	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=intron:HG00140_ch_T0001079:17;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14549756	14549975	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=exon:HG00140_ch_T0001079:18;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14549756	14549975	.	-	1	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=CDS:HG00140_ch_T0001079:18;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14549976	14550418	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=intron:HG00140_ch_T0001079:18;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14550419	14550517	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=exon:HG00140_ch_T0001079:19;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14550419	14550517	.	-	1	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=CDS:HG00140_ch_T0001079:19;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14550518	14556255	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=intron:HG00140_ch_T0001079:19;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14556256	14556382	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=exon:HG00140_ch_T0001079:20;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14556256	14556382	.	-	2	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=CDS:HG00140_ch_T0001079:20;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14556383	14559244	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=intron:HG00140_ch_T0001079:20;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14559245	14559338	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=exon:HG00140_ch_T0001079:21;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14559245	14559338	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=CDS:HG00140_ch_T0001079:21;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14559339	14583847	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=intron:HG00140_ch_T0001079:21;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14583848	14583882	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=exon:HG00140_ch_T0001079:22;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14583848	14583882	.	-	2	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=CDS:HG00140_ch_T0001079:22;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14583883	14586906	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=intron:HG00140_ch_T0001079:22;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14586907	14586961	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=exon:HG00140_ch_T0001079:23;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14586907	14586961	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=CDS:HG00140_ch_T0001079:23;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14586962	14600981	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=intron:HG00140_ch_T0001079:23;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14600982	14601102	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=exon:HG00140_ch_T0001079:24;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14600982	14601102	.	-	1	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=CDS:HG00140_ch_T0001079:24;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14601103	14604723	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=intron:HG00140_ch_T0001079:24;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14604724	14604782	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=exon:HG00140_ch_T0001079:25;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14604724	14604782	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=CDS:HG00140_ch_T0001079:25;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14604783	14639017	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=intron:HG00140_ch_T0001079:25;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14639018	14639067	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=exon:HG00140_ch_T0001079:26;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14639018	14639067	.	-	2	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=CDS:HG00140_ch_T0001079:26;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14639068	14660121	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=intron:HG00140_ch_T0001079:26;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14660122	14660230	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=exon:HG00140_ch_T0001079:27;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14660122	14660230	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=CDS:HG00140_ch_T0001079:27;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14660231	14669254	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=intron:HG00140_ch_T0001079:27;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14669255	14669318	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=exon:HG00140_ch_T0001079:28;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14669255	14669318	.	-	1	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=CDS:HG00140_ch_T0001079:28;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14669319	14669514	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=intron:HG00140_ch_T0001079:28;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14669515	14669992	.	-	.	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=exon:HG00140_ch_T0001079:29;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14669515	14669666	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=CDS:HG00140_ch_T0001079:29;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	14669664	14669666	.	-	0	source_transcript=ENST00000382896.9;source_transcript_name=UTY-205;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382896.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000382896.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382896.9,ENST00000382896.9;transcript_id=HG00140_ch_T0001079;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001079;transcript_name=HG00140_ch_T0001079;gene_name=UTY;ID=start_codon:HG00140_ch_T0001079;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	14439843	14669666	100	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_G0000348;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=HG00140_ch_T0001080;Name=UTY
HG00140_chrY	CAT	exon	14439843	14439869	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=exon:HG00140_ch_T0001080:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14439843	14439869	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=CDS:HG00140_ch_T0001080:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	14439843	14439845	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=stop_codon:HG00140_ch_T0001080;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14439870	14450264	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=intron:HG00140_ch_T0001080:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14450265	14450391	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=exon:HG00140_ch_T0001080:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14450265	14450391	.	-	1	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=CDS:HG00140_ch_T0001080:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14450392	14487693	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=intron:HG00140_ch_T0001080:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14487694	14487835	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=exon:HG00140_ch_T0001080:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14487694	14487835	.	-	2	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=CDS:HG00140_ch_T0001080:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14487836	14488943	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=intron:HG00140_ch_T0001080:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14488944	14489131	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=exon:HG00140_ch_T0001080:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14488944	14489131	.	-	1	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=CDS:HG00140_ch_T0001080:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14489132	14492863	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=intron:HG00140_ch_T0001080:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14492864	14492978	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=exon:HG00140_ch_T0001080:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14492864	14492978	.	-	2	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=CDS:HG00140_ch_T0001080:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14492979	14495385	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=intron:HG00140_ch_T0001080:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14495386	14495534	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=exon:HG00140_ch_T0001080:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14495386	14495534	.	-	1	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=CDS:HG00140_ch_T0001080:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14495535	14496024	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=intron:HG00140_ch_T0001080:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14496025	14496099	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=exon:HG00140_ch_T0001080:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14496025	14496099	.	-	1	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=CDS:HG00140_ch_T0001080:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14496100	14496172	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=intron:HG00140_ch_T0001080:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14496173	14496237	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=exon:HG00140_ch_T0001080:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14496173	14496237	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=CDS:HG00140_ch_T0001080:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14496238	14513543	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=intron:HG00140_ch_T0001080:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14513544	14513749	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=exon:HG00140_ch_T0001080:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14513544	14513749	.	-	2	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=CDS:HG00140_ch_T0001080:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14513750	14514589	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=intron:HG00140_ch_T0001080:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14514590	14514695	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=exon:HG00140_ch_T0001080:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14514590	14514695	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=CDS:HG00140_ch_T0001080:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14514696	14516209	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=intron:HG00140_ch_T0001080:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14516210	14516339	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=exon:HG00140_ch_T0001080:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14516210	14516339	.	-	1	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=CDS:HG00140_ch_T0001080:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14516340	14525551	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=intron:HG00140_ch_T0001080:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14525552	14526324	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=exon:HG00140_ch_T0001080:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14525552	14526324	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=CDS:HG00140_ch_T0001080:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14526325	14544991	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=intron:HG00140_ch_T0001080:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14544992	14545387	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=exon:HG00140_ch_T0001080:12;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14544992	14545387	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=CDS:HG00140_ch_T0001080:12;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14545388	14545911	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=intron:HG00140_ch_T0001080:12;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14545912	14546007	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=exon:HG00140_ch_T0001080:13;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14545912	14546007	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=CDS:HG00140_ch_T0001080:13;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14546008	14547865	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=intron:HG00140_ch_T0001080:13;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14547866	14547958	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=exon:HG00140_ch_T0001080:14;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14547866	14547958	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=CDS:HG00140_ch_T0001080:14;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14547959	14549076	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=intron:HG00140_ch_T0001080:14;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14549077	14549211	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=exon:HG00140_ch_T0001080:15;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14549077	14549211	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=CDS:HG00140_ch_T0001080:15;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14549212	14549755	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=intron:HG00140_ch_T0001080:15;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14549756	14549975	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=exon:HG00140_ch_T0001080:16;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14549756	14549975	.	-	1	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=CDS:HG00140_ch_T0001080:16;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14549976	14550418	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=intron:HG00140_ch_T0001080:16;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14550419	14550517	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=exon:HG00140_ch_T0001080:17;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14550419	14550517	.	-	1	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=CDS:HG00140_ch_T0001080:17;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14550518	14556255	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=intron:HG00140_ch_T0001080:17;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14556256	14556382	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=exon:HG00140_ch_T0001080:18;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14556256	14556382	.	-	2	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=CDS:HG00140_ch_T0001080:18;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14556383	14559244	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=intron:HG00140_ch_T0001080:18;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14559245	14559338	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=exon:HG00140_ch_T0001080:19;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14559245	14559338	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=CDS:HG00140_ch_T0001080:19;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14559339	14583847	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=intron:HG00140_ch_T0001080:19;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14583848	14583882	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=exon:HG00140_ch_T0001080:20;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14583848	14583882	.	-	2	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=CDS:HG00140_ch_T0001080:20;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14583883	14586906	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=intron:HG00140_ch_T0001080:20;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14586907	14586961	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=exon:HG00140_ch_T0001080:21;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14586907	14586961	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=CDS:HG00140_ch_T0001080:21;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14586962	14600981	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=intron:HG00140_ch_T0001080:21;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14600982	14601102	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=exon:HG00140_ch_T0001080:22;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14600982	14601102	.	-	1	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=CDS:HG00140_ch_T0001080:22;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14601103	14604723	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=intron:HG00140_ch_T0001080:22;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14604724	14604782	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=exon:HG00140_ch_T0001080:23;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14604724	14604782	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=CDS:HG00140_ch_T0001080:23;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14604783	14639017	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=intron:HG00140_ch_T0001080:23;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14639018	14639067	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=exon:HG00140_ch_T0001080:24;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14639018	14639067	.	-	2	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=CDS:HG00140_ch_T0001080:24;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14639068	14660121	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=intron:HG00140_ch_T0001080:24;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14660122	14660230	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=exon:HG00140_ch_T0001080:25;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14660122	14660230	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=CDS:HG00140_ch_T0001080:25;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14660231	14669254	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=intron:HG00140_ch_T0001080:25;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14669255	14669318	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=exon:HG00140_ch_T0001080:26;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14669255	14669318	.	-	1	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=CDS:HG00140_ch_T0001080:26;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14669319	14669514	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=intron:HG00140_ch_T0001080:26;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14669515	14669666	.	-	.	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=exon:HG00140_ch_T0001080:27;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14669515	14669666	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=CDS:HG00140_ch_T0001080:27;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	14669664	14669666	.	-	0	source_transcript=ENST00000537580.6;source_transcript_name=UTY-209;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000537580.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000537580.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000537580.6,ENST00000537580.6;transcript_id=HG00140_ch_T0001080;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001080;transcript_name=HG00140_ch_T0001080;gene_name=UTY;ID=start_codon:HG00140_ch_T0001080;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	14439843	14669666	100	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_G0000348;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=HG00140_ch_T0001081;Name=UTY
HG00140_chrY	CAT	exon	14439843	14439869	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=exon:HG00140_ch_T0001081:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14439843	14439869	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=CDS:HG00140_ch_T0001081:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	14439843	14439845	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=stop_codon:HG00140_ch_T0001081;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14439870	14441003	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=intron:HG00140_ch_T0001081:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14441004	14441174	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=exon:HG00140_ch_T0001081:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14441004	14441174	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=CDS:HG00140_ch_T0001081:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14441175	14450264	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=intron:HG00140_ch_T0001081:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14450265	14450391	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=exon:HG00140_ch_T0001081:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14450265	14450391	.	-	1	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=CDS:HG00140_ch_T0001081:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14450392	14487693	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=intron:HG00140_ch_T0001081:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14487694	14487835	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=exon:HG00140_ch_T0001081:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14487694	14487835	.	-	2	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=CDS:HG00140_ch_T0001081:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14487836	14488943	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=intron:HG00140_ch_T0001081:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14488944	14489131	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=exon:HG00140_ch_T0001081:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14488944	14489131	.	-	1	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=CDS:HG00140_ch_T0001081:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14489132	14492863	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=intron:HG00140_ch_T0001081:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14492864	14492978	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=exon:HG00140_ch_T0001081:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14492864	14492978	.	-	2	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=CDS:HG00140_ch_T0001081:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14492979	14495385	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=intron:HG00140_ch_T0001081:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14495386	14495534	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=exon:HG00140_ch_T0001081:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14495386	14495534	.	-	1	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=CDS:HG00140_ch_T0001081:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14495535	14496024	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=intron:HG00140_ch_T0001081:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14496025	14496099	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=exon:HG00140_ch_T0001081:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14496025	14496099	.	-	1	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=CDS:HG00140_ch_T0001081:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14496100	14496172	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=intron:HG00140_ch_T0001081:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14496173	14496237	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=exon:HG00140_ch_T0001081:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14496173	14496237	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=CDS:HG00140_ch_T0001081:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14496238	14513543	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=intron:HG00140_ch_T0001081:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14513544	14513749	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=exon:HG00140_ch_T0001081:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14513544	14513749	.	-	2	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=CDS:HG00140_ch_T0001081:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14513750	14514589	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=intron:HG00140_ch_T0001081:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14514590	14514695	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=exon:HG00140_ch_T0001081:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14514590	14514695	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=CDS:HG00140_ch_T0001081:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14514696	14516209	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=intron:HG00140_ch_T0001081:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14516210	14516339	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=exon:HG00140_ch_T0001081:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14516210	14516339	.	-	1	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=CDS:HG00140_ch_T0001081:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14516340	14525551	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=intron:HG00140_ch_T0001081:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14525552	14526324	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=exon:HG00140_ch_T0001081:12;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14525552	14526324	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=CDS:HG00140_ch_T0001081:12;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14526325	14544774	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=intron:HG00140_ch_T0001081:12;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14544775	14544822	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=exon:HG00140_ch_T0001081:13;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14544775	14544822	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=CDS:HG00140_ch_T0001081:13;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14544823	14544991	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=intron:HG00140_ch_T0001081:13;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14544992	14545387	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=exon:HG00140_ch_T0001081:14;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14544992	14545387	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=CDS:HG00140_ch_T0001081:14;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14545388	14545911	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=intron:HG00140_ch_T0001081:14;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14545912	14546007	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=exon:HG00140_ch_T0001081:15;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14545912	14546007	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=CDS:HG00140_ch_T0001081:15;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14546008	14547865	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=intron:HG00140_ch_T0001081:15;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14547866	14547958	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=exon:HG00140_ch_T0001081:16;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14547866	14547958	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=CDS:HG00140_ch_T0001081:16;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14547959	14549755	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=intron:HG00140_ch_T0001081:16;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14549756	14549975	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=exon:HG00140_ch_T0001081:17;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14549756	14549975	.	-	1	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=CDS:HG00140_ch_T0001081:17;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14549976	14550418	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=intron:HG00140_ch_T0001081:17;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14550419	14550517	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=exon:HG00140_ch_T0001081:18;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14550419	14550517	.	-	1	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=CDS:HG00140_ch_T0001081:18;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14550518	14556255	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=intron:HG00140_ch_T0001081:18;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14556256	14556382	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=exon:HG00140_ch_T0001081:19;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14556256	14556382	.	-	2	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=CDS:HG00140_ch_T0001081:19;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14556383	14559244	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=intron:HG00140_ch_T0001081:19;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14559245	14559338	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=exon:HG00140_ch_T0001081:20;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14559245	14559338	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=CDS:HG00140_ch_T0001081:20;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14559339	14583847	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=intron:HG00140_ch_T0001081:20;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14583848	14583882	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=exon:HG00140_ch_T0001081:21;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14583848	14583882	.	-	2	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=CDS:HG00140_ch_T0001081:21;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14583883	14586906	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=intron:HG00140_ch_T0001081:21;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14586907	14586961	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=exon:HG00140_ch_T0001081:22;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14586907	14586961	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=CDS:HG00140_ch_T0001081:22;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14586962	14600981	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=intron:HG00140_ch_T0001081:22;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14600982	14601102	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=exon:HG00140_ch_T0001081:23;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14600982	14601102	.	-	1	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=CDS:HG00140_ch_T0001081:23;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14601103	14604723	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=intron:HG00140_ch_T0001081:23;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14604724	14604782	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=exon:HG00140_ch_T0001081:24;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14604724	14604782	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=CDS:HG00140_ch_T0001081:24;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14604783	14639017	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=intron:HG00140_ch_T0001081:24;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14639018	14639067	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=exon:HG00140_ch_T0001081:25;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14639018	14639067	.	-	2	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=CDS:HG00140_ch_T0001081:25;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14639068	14660121	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=intron:HG00140_ch_T0001081:25;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14660122	14660230	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=exon:HG00140_ch_T0001081:26;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14660122	14660230	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=CDS:HG00140_ch_T0001081:26;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14660231	14669254	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=intron:HG00140_ch_T0001081:26;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14669255	14669318	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=exon:HG00140_ch_T0001081:27;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14669255	14669318	.	-	1	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=CDS:HG00140_ch_T0001081:27;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14669319	14669514	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=intron:HG00140_ch_T0001081:27;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14669515	14669666	.	-	.	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=exon:HG00140_ch_T0001081:28;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14669515	14669666	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=CDS:HG00140_ch_T0001081:28;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	14669664	14669666	.	-	0	source_transcript=ENST00000538878.6;source_transcript_name=UTY-210;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000538878.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000538878.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000538878.6,ENST00000538878.6;transcript_id=HG00140_ch_T0001081;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001081;transcript_name=HG00140_ch_T0001081;gene_name=UTY;ID=start_codon:HG00140_ch_T0001081;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	14439843	14669666	100	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_G0000348;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=HG00140_ch_T0001082;Name=UTY
HG00140_chrY	CAT	exon	14439843	14439869	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=exon:HG00140_ch_T0001082:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14439843	14439869	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=CDS:HG00140_ch_T0001082:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	14439843	14439845	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=stop_codon:HG00140_ch_T0001082;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14439870	14441003	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=intron:HG00140_ch_T0001082:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14441004	14441174	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=exon:HG00140_ch_T0001082:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14441004	14441174	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=CDS:HG00140_ch_T0001082:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14441175	14450264	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=intron:HG00140_ch_T0001082:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14450265	14450391	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=exon:HG00140_ch_T0001082:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14450265	14450391	.	-	1	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=CDS:HG00140_ch_T0001082:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14450392	14487693	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=intron:HG00140_ch_T0001082:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14487694	14487835	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=exon:HG00140_ch_T0001082:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14487694	14487835	.	-	2	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=CDS:HG00140_ch_T0001082:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14487836	14488943	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=intron:HG00140_ch_T0001082:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14488944	14489131	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=exon:HG00140_ch_T0001082:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14488944	14489131	.	-	1	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=CDS:HG00140_ch_T0001082:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14489132	14492863	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=intron:HG00140_ch_T0001082:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14492864	14492978	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=exon:HG00140_ch_T0001082:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14492864	14492978	.	-	2	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=CDS:HG00140_ch_T0001082:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14492979	14495385	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=intron:HG00140_ch_T0001082:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14495386	14495534	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=exon:HG00140_ch_T0001082:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14495386	14495534	.	-	1	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=CDS:HG00140_ch_T0001082:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14495535	14496024	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=intron:HG00140_ch_T0001082:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14496025	14496099	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=exon:HG00140_ch_T0001082:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14496025	14496099	.	-	1	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=CDS:HG00140_ch_T0001082:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14496100	14496172	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=intron:HG00140_ch_T0001082:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14496173	14496237	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=exon:HG00140_ch_T0001082:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14496173	14496237	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=CDS:HG00140_ch_T0001082:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14496238	14513543	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=intron:HG00140_ch_T0001082:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14513544	14513749	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=exon:HG00140_ch_T0001082:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14513544	14513749	.	-	2	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=CDS:HG00140_ch_T0001082:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14513750	14514589	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=intron:HG00140_ch_T0001082:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14514590	14514695	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=exon:HG00140_ch_T0001082:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14514590	14514695	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=CDS:HG00140_ch_T0001082:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14514696	14516209	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=intron:HG00140_ch_T0001082:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14516210	14516339	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=exon:HG00140_ch_T0001082:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14516210	14516339	.	-	1	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=CDS:HG00140_ch_T0001082:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14516340	14525551	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=intron:HG00140_ch_T0001082:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14525552	14526324	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=exon:HG00140_ch_T0001082:12;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14525552	14526324	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=CDS:HG00140_ch_T0001082:12;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14526325	14544991	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=intron:HG00140_ch_T0001082:12;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14544992	14545387	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=exon:HG00140_ch_T0001082:13;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14544992	14545387	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=CDS:HG00140_ch_T0001082:13;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14545388	14545911	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=intron:HG00140_ch_T0001082:13;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14545912	14546007	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=exon:HG00140_ch_T0001082:14;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14545912	14546007	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=CDS:HG00140_ch_T0001082:14;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14546008	14547865	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=intron:HG00140_ch_T0001082:14;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14547866	14547958	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=exon:HG00140_ch_T0001082:15;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14547866	14547958	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=CDS:HG00140_ch_T0001082:15;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14547959	14548452	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=intron:HG00140_ch_T0001082:15;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14548453	14548542	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=exon:HG00140_ch_T0001082:16;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14548453	14548542	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=CDS:HG00140_ch_T0001082:16;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14548543	14549076	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=intron:HG00140_ch_T0001082:16;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14549077	14549211	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=exon:HG00140_ch_T0001082:17;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14549077	14549211	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=CDS:HG00140_ch_T0001082:17;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14549212	14549755	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=intron:HG00140_ch_T0001082:17;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14549756	14549975	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=exon:HG00140_ch_T0001082:18;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14549756	14549975	.	-	1	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=CDS:HG00140_ch_T0001082:18;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14549976	14556255	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=intron:HG00140_ch_T0001082:18;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14556256	14556382	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=exon:HG00140_ch_T0001082:19;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14556256	14556382	.	-	2	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=CDS:HG00140_ch_T0001082:19;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14556383	14559244	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=intron:HG00140_ch_T0001082:19;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14559245	14559338	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=exon:HG00140_ch_T0001082:20;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14559245	14559338	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=CDS:HG00140_ch_T0001082:20;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14559339	14583847	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=intron:HG00140_ch_T0001082:20;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14583848	14583882	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=exon:HG00140_ch_T0001082:21;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14583848	14583882	.	-	2	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=CDS:HG00140_ch_T0001082:21;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14583883	14586906	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=intron:HG00140_ch_T0001082:21;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14586907	14586961	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=exon:HG00140_ch_T0001082:22;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14586907	14586961	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=CDS:HG00140_ch_T0001082:22;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14586962	14600981	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=intron:HG00140_ch_T0001082:22;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14600982	14601102	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=exon:HG00140_ch_T0001082:23;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14600982	14601102	.	-	1	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=CDS:HG00140_ch_T0001082:23;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14601103	14604723	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=intron:HG00140_ch_T0001082:23;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14604724	14604782	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=exon:HG00140_ch_T0001082:24;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14604724	14604782	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=CDS:HG00140_ch_T0001082:24;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14604783	14639017	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=intron:HG00140_ch_T0001082:24;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14639018	14639067	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=exon:HG00140_ch_T0001082:25;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14639018	14639067	.	-	2	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=CDS:HG00140_ch_T0001082:25;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14639068	14660121	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=intron:HG00140_ch_T0001082:25;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14660122	14660230	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=exon:HG00140_ch_T0001082:26;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14660122	14660230	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=CDS:HG00140_ch_T0001082:26;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14660231	14669254	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=intron:HG00140_ch_T0001082:26;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14669255	14669318	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=exon:HG00140_ch_T0001082:27;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14669255	14669318	.	-	1	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=CDS:HG00140_ch_T0001082:27;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14669319	14669514	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=intron:HG00140_ch_T0001082:27;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14669515	14669666	.	-	.	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=exon:HG00140_ch_T0001082:28;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14669515	14669666	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=CDS:HG00140_ch_T0001082:28;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	14669664	14669666	.	-	0	source_transcript=ENST00000540140.6;source_transcript_name=UTY-211;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540140.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000540140.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000540140.6,ENST00000540140.6;transcript_id=HG00140_ch_T0001082;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001082;transcript_name=HG00140_ch_T0001082;gene_name=UTY;ID=start_codon:HG00140_ch_T0001082;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	14439843	14669666	100	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_G0000348;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=HG00140_ch_T0001083;Name=UTY
HG00140_chrY	CAT	exon	14439843	14439869	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=exon:HG00140_ch_T0001083:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14439843	14439869	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=CDS:HG00140_ch_T0001083:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	14439843	14439845	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=stop_codon:HG00140_ch_T0001083;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14439870	14441003	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=intron:HG00140_ch_T0001083:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14441004	14441174	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=exon:HG00140_ch_T0001083:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14441004	14441174	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=CDS:HG00140_ch_T0001083:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14441175	14450264	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=intron:HG00140_ch_T0001083:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14450265	14450391	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=exon:HG00140_ch_T0001083:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14450265	14450391	.	-	1	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=CDS:HG00140_ch_T0001083:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14450392	14487693	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=intron:HG00140_ch_T0001083:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14487694	14487835	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=exon:HG00140_ch_T0001083:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14487694	14487835	.	-	2	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=CDS:HG00140_ch_T0001083:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14487836	14488943	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=intron:HG00140_ch_T0001083:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14488944	14489131	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=exon:HG00140_ch_T0001083:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14488944	14489131	.	-	1	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=CDS:HG00140_ch_T0001083:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14489132	14492863	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=intron:HG00140_ch_T0001083:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14492864	14492978	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=exon:HG00140_ch_T0001083:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14492864	14492978	.	-	2	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=CDS:HG00140_ch_T0001083:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14492979	14495385	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=intron:HG00140_ch_T0001083:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14495386	14495534	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=exon:HG00140_ch_T0001083:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14495386	14495534	.	-	1	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=CDS:HG00140_ch_T0001083:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14495535	14496172	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=intron:HG00140_ch_T0001083:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14496173	14496237	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=exon:HG00140_ch_T0001083:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14496173	14496237	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=CDS:HG00140_ch_T0001083:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14496238	14513543	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=intron:HG00140_ch_T0001083:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14513544	14513749	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=exon:HG00140_ch_T0001083:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14513544	14513749	.	-	2	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=CDS:HG00140_ch_T0001083:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14513750	14514589	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=intron:HG00140_ch_T0001083:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14514590	14514695	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=exon:HG00140_ch_T0001083:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14514590	14514695	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=CDS:HG00140_ch_T0001083:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14514696	14516209	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=intron:HG00140_ch_T0001083:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14516210	14516339	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=exon:HG00140_ch_T0001083:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14516210	14516339	.	-	1	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=CDS:HG00140_ch_T0001083:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14516340	14525551	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=intron:HG00140_ch_T0001083:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14525552	14526324	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=exon:HG00140_ch_T0001083:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14525552	14526324	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=CDS:HG00140_ch_T0001083:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14526325	14544991	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=intron:HG00140_ch_T0001083:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14544992	14545387	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=exon:HG00140_ch_T0001083:12;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14544992	14545387	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=CDS:HG00140_ch_T0001083:12;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14545388	14545911	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=intron:HG00140_ch_T0001083:12;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14545912	14546007	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=exon:HG00140_ch_T0001083:13;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14545912	14546007	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=CDS:HG00140_ch_T0001083:13;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14546008	14547865	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=intron:HG00140_ch_T0001083:13;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14547866	14547958	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=exon:HG00140_ch_T0001083:14;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14547866	14547958	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=CDS:HG00140_ch_T0001083:14;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14547959	14549076	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=intron:HG00140_ch_T0001083:14;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14549077	14549211	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=exon:HG00140_ch_T0001083:15;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14549077	14549211	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=CDS:HG00140_ch_T0001083:15;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14549212	14549755	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=intron:HG00140_ch_T0001083:15;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14549756	14549975	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=exon:HG00140_ch_T0001083:16;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14549756	14549975	.	-	1	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=CDS:HG00140_ch_T0001083:16;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14549976	14550418	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=intron:HG00140_ch_T0001083:16;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14550419	14550517	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=exon:HG00140_ch_T0001083:17;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14550419	14550517	.	-	1	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=CDS:HG00140_ch_T0001083:17;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14550518	14556255	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=intron:HG00140_ch_T0001083:17;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14556256	14556382	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=exon:HG00140_ch_T0001083:18;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14556256	14556382	.	-	2	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=CDS:HG00140_ch_T0001083:18;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14556383	14559244	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=intron:HG00140_ch_T0001083:18;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14559245	14559338	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=exon:HG00140_ch_T0001083:19;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14559245	14559338	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=CDS:HG00140_ch_T0001083:19;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14559339	14583847	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=intron:HG00140_ch_T0001083:19;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14583848	14583882	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=exon:HG00140_ch_T0001083:20;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14583848	14583882	.	-	2	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=CDS:HG00140_ch_T0001083:20;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14583883	14586906	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=intron:HG00140_ch_T0001083:20;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14586907	14586961	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=exon:HG00140_ch_T0001083:21;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14586907	14586961	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=CDS:HG00140_ch_T0001083:21;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14586962	14600981	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=intron:HG00140_ch_T0001083:21;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14600982	14601102	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=exon:HG00140_ch_T0001083:22;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14600982	14601102	.	-	1	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=CDS:HG00140_ch_T0001083:22;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14601103	14604723	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=intron:HG00140_ch_T0001083:22;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14604724	14604782	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=exon:HG00140_ch_T0001083:23;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14604724	14604782	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=CDS:HG00140_ch_T0001083:23;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14604783	14639017	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=intron:HG00140_ch_T0001083:23;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14639018	14639067	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=exon:HG00140_ch_T0001083:24;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14639018	14639067	.	-	2	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=CDS:HG00140_ch_T0001083:24;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14639068	14660121	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=intron:HG00140_ch_T0001083:24;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14660122	14660230	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=exon:HG00140_ch_T0001083:25;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14660122	14660230	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=CDS:HG00140_ch_T0001083:25;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14660231	14669254	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=intron:HG00140_ch_T0001083:25;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14669255	14669318	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=exon:HG00140_ch_T0001083:26;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14669255	14669318	.	-	1	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=CDS:HG00140_ch_T0001083:26;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14669319	14669514	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=intron:HG00140_ch_T0001083:26;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14669515	14669666	.	-	.	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=exon:HG00140_ch_T0001083:27;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14669515	14669666	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=CDS:HG00140_ch_T0001083:27;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	14669664	14669666	.	-	0	source_transcript=ENST00000612274.5;source_transcript_name=UTY-213;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000612274.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000612274.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000612274.5,ENST00000612274.5;transcript_id=HG00140_ch_T0001083;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001083;transcript_name=HG00140_ch_T0001083;gene_name=UTY;ID=start_codon:HG00140_ch_T0001083;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	14439843	14669666	100	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_G0000348;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=HG00140_ch_T0001084;Name=UTY
HG00140_chrY	CAT	exon	14439843	14439869	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=exon:HG00140_ch_T0001084:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14439843	14439869	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=CDS:HG00140_ch_T0001084:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	14439843	14439845	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=stop_codon:HG00140_ch_T0001084;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14439870	14441003	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=intron:HG00140_ch_T0001084:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14441004	14441174	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=exon:HG00140_ch_T0001084:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14441004	14441174	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=CDS:HG00140_ch_T0001084:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14441175	14450264	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=intron:HG00140_ch_T0001084:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14450265	14450391	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=exon:HG00140_ch_T0001084:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14450265	14450391	.	-	1	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=CDS:HG00140_ch_T0001084:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14450392	14487693	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=intron:HG00140_ch_T0001084:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14487694	14487835	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=exon:HG00140_ch_T0001084:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14487694	14487835	.	-	2	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=CDS:HG00140_ch_T0001084:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14487836	14488943	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=intron:HG00140_ch_T0001084:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14488944	14489131	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=exon:HG00140_ch_T0001084:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14488944	14489131	.	-	1	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=CDS:HG00140_ch_T0001084:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14489132	14492863	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=intron:HG00140_ch_T0001084:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14492864	14492978	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=exon:HG00140_ch_T0001084:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14492864	14492978	.	-	2	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=CDS:HG00140_ch_T0001084:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14492979	14495385	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=intron:HG00140_ch_T0001084:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14495386	14495534	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=exon:HG00140_ch_T0001084:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14495386	14495534	.	-	1	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=CDS:HG00140_ch_T0001084:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14495535	14496024	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=intron:HG00140_ch_T0001084:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14496025	14496099	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=exon:HG00140_ch_T0001084:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14496025	14496099	.	-	1	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=CDS:HG00140_ch_T0001084:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14496100	14496172	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=intron:HG00140_ch_T0001084:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14496173	14496237	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=exon:HG00140_ch_T0001084:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14496173	14496237	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=CDS:HG00140_ch_T0001084:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14496238	14513543	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=intron:HG00140_ch_T0001084:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14513544	14513749	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=exon:HG00140_ch_T0001084:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14513544	14513749	.	-	2	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=CDS:HG00140_ch_T0001084:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14513750	14514589	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=intron:HG00140_ch_T0001084:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14514590	14514695	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=exon:HG00140_ch_T0001084:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14514590	14514695	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=CDS:HG00140_ch_T0001084:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14514696	14516209	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=intron:HG00140_ch_T0001084:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14516210	14516339	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=exon:HG00140_ch_T0001084:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14516210	14516339	.	-	1	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=CDS:HG00140_ch_T0001084:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14516340	14525551	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=intron:HG00140_ch_T0001084:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14525552	14526324	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=exon:HG00140_ch_T0001084:12;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14525552	14526324	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=CDS:HG00140_ch_T0001084:12;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14526325	14544991	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=intron:HG00140_ch_T0001084:12;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14544992	14545387	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=exon:HG00140_ch_T0001084:13;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14544992	14545387	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=CDS:HG00140_ch_T0001084:13;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14545388	14545911	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=intron:HG00140_ch_T0001084:13;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14545912	14546007	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=exon:HG00140_ch_T0001084:14;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14545912	14546007	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=CDS:HG00140_ch_T0001084:14;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14546008	14547865	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=intron:HG00140_ch_T0001084:14;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14547866	14547958	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=exon:HG00140_ch_T0001084:15;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14547866	14547958	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=CDS:HG00140_ch_T0001084:15;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14547959	14548452	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=intron:HG00140_ch_T0001084:15;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14548453	14548608	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=exon:HG00140_ch_T0001084:16;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14548453	14548608	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=CDS:HG00140_ch_T0001084:16;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14548609	14549755	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=intron:HG00140_ch_T0001084:16;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14549756	14549975	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=exon:HG00140_ch_T0001084:17;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14549756	14549975	.	-	1	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=CDS:HG00140_ch_T0001084:17;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14549976	14550418	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=intron:HG00140_ch_T0001084:17;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14550419	14550517	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=exon:HG00140_ch_T0001084:18;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14550419	14550517	.	-	1	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=CDS:HG00140_ch_T0001084:18;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14550518	14556255	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=intron:HG00140_ch_T0001084:18;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14556256	14556382	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=exon:HG00140_ch_T0001084:19;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14556256	14556382	.	-	2	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=CDS:HG00140_ch_T0001084:19;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14556383	14559244	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=intron:HG00140_ch_T0001084:19;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14559245	14559338	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=exon:HG00140_ch_T0001084:20;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14559245	14559338	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=CDS:HG00140_ch_T0001084:20;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14559339	14583847	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=intron:HG00140_ch_T0001084:20;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14583848	14583882	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=exon:HG00140_ch_T0001084:21;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14583848	14583882	.	-	2	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=CDS:HG00140_ch_T0001084:21;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14583883	14586906	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=intron:HG00140_ch_T0001084:21;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14586907	14586961	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=exon:HG00140_ch_T0001084:22;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14586907	14586961	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=CDS:HG00140_ch_T0001084:22;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14586962	14600981	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=intron:HG00140_ch_T0001084:22;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14600982	14601102	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=exon:HG00140_ch_T0001084:23;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14600982	14601102	.	-	1	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=CDS:HG00140_ch_T0001084:23;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14601103	14604723	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=intron:HG00140_ch_T0001084:23;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14604724	14604782	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=exon:HG00140_ch_T0001084:24;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14604724	14604782	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=CDS:HG00140_ch_T0001084:24;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14604783	14639017	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=intron:HG00140_ch_T0001084:24;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14639018	14639067	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=exon:HG00140_ch_T0001084:25;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14639018	14639067	.	-	2	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=CDS:HG00140_ch_T0001084:25;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14639068	14660121	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=intron:HG00140_ch_T0001084:25;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14660122	14660230	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=exon:HG00140_ch_T0001084:26;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14660122	14660230	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=CDS:HG00140_ch_T0001084:26;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14660231	14669254	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=intron:HG00140_ch_T0001084:26;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14669255	14669318	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=exon:HG00140_ch_T0001084:27;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14669255	14669318	.	-	1	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=CDS:HG00140_ch_T0001084:27;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14669319	14669514	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=intron:HG00140_ch_T0001084:27;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14669515	14669666	.	-	.	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=exon:HG00140_ch_T0001084:28;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14669515	14669666	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=CDS:HG00140_ch_T0001084:28;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	14669664	14669666	.	-	0	source_transcript=ENST00000617789.5;source_transcript_name=UTY-214;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000617789.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000617789.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000617789.5,ENST00000617789.5;transcript_id=HG00140_ch_T0001084;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001084;transcript_name=HG00140_ch_T0001084;gene_name=UTY;ID=start_codon:HG00140_ch_T0001084;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	14439843	14669666	100	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_G0000348;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=HG00140_ch_T0001085;Name=UTY
HG00140_chrY	CAT	exon	14439843	14439869	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=exon:HG00140_ch_T0001085:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14439843	14439869	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=CDS:HG00140_ch_T0001085:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	14439843	14439845	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=stop_codon:HG00140_ch_T0001085;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14439870	14441003	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=intron:HG00140_ch_T0001085:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14441004	14441174	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=exon:HG00140_ch_T0001085:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14441004	14441174	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=CDS:HG00140_ch_T0001085:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14441175	14450264	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=intron:HG00140_ch_T0001085:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14450265	14450391	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=exon:HG00140_ch_T0001085:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14450265	14450391	.	-	1	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=CDS:HG00140_ch_T0001085:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14450392	14487693	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=intron:HG00140_ch_T0001085:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14487694	14487835	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=exon:HG00140_ch_T0001085:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14487694	14487835	.	-	2	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=CDS:HG00140_ch_T0001085:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14487836	14488943	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=intron:HG00140_ch_T0001085:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14488944	14489131	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=exon:HG00140_ch_T0001085:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14488944	14489131	.	-	1	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=CDS:HG00140_ch_T0001085:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14489132	14492863	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=intron:HG00140_ch_T0001085:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14492864	14492978	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=exon:HG00140_ch_T0001085:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14492864	14492978	.	-	2	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=CDS:HG00140_ch_T0001085:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14492979	14495385	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=intron:HG00140_ch_T0001085:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14495386	14495534	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=exon:HG00140_ch_T0001085:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14495386	14495534	.	-	1	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=CDS:HG00140_ch_T0001085:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14495535	14496024	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=intron:HG00140_ch_T0001085:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14496025	14496099	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=exon:HG00140_ch_T0001085:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14496025	14496099	.	-	1	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=CDS:HG00140_ch_T0001085:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14496100	14496172	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=intron:HG00140_ch_T0001085:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14496173	14496237	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=exon:HG00140_ch_T0001085:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14496173	14496237	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=CDS:HG00140_ch_T0001085:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14496238	14513543	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=intron:HG00140_ch_T0001085:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14513544	14513749	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=exon:HG00140_ch_T0001085:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14513544	14513749	.	-	2	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=CDS:HG00140_ch_T0001085:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14513750	14514589	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=intron:HG00140_ch_T0001085:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14514590	14514695	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=exon:HG00140_ch_T0001085:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14514590	14514695	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=CDS:HG00140_ch_T0001085:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14514696	14516209	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=intron:HG00140_ch_T0001085:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14516210	14516339	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=exon:HG00140_ch_T0001085:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14516210	14516339	.	-	1	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=CDS:HG00140_ch_T0001085:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14516340	14525551	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=intron:HG00140_ch_T0001085:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14525552	14526324	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=exon:HG00140_ch_T0001085:12;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14525552	14526324	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=CDS:HG00140_ch_T0001085:12;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14526325	14544991	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=intron:HG00140_ch_T0001085:12;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14544992	14545387	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=exon:HG00140_ch_T0001085:13;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14544992	14545387	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=CDS:HG00140_ch_T0001085:13;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14545388	14545911	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=intron:HG00140_ch_T0001085:13;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14545912	14546007	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=exon:HG00140_ch_T0001085:14;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14545912	14546007	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=CDS:HG00140_ch_T0001085:14;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14546008	14547865	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=intron:HG00140_ch_T0001085:14;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14547866	14547958	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=exon:HG00140_ch_T0001085:15;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14547866	14547958	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=CDS:HG00140_ch_T0001085:15;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14547959	14549755	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=intron:HG00140_ch_T0001085:15;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14549756	14549975	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=exon:HG00140_ch_T0001085:16;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14549756	14549975	.	-	1	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=CDS:HG00140_ch_T0001085:16;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14549976	14550418	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=intron:HG00140_ch_T0001085:16;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14550419	14550517	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=exon:HG00140_ch_T0001085:17;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14550419	14550517	.	-	1	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=CDS:HG00140_ch_T0001085:17;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14550518	14556255	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=intron:HG00140_ch_T0001085:17;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14556256	14556382	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=exon:HG00140_ch_T0001085:18;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14556256	14556382	.	-	2	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=CDS:HG00140_ch_T0001085:18;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14556383	14559244	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=intron:HG00140_ch_T0001085:18;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14559245	14559338	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=exon:HG00140_ch_T0001085:19;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14559245	14559338	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=CDS:HG00140_ch_T0001085:19;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14559339	14600981	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=intron:HG00140_ch_T0001085:19;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14600982	14601102	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=exon:HG00140_ch_T0001085:20;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14600982	14601102	.	-	1	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=CDS:HG00140_ch_T0001085:20;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14601103	14604723	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=intron:HG00140_ch_T0001085:20;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14604724	14604782	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=exon:HG00140_ch_T0001085:21;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14604724	14604782	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=CDS:HG00140_ch_T0001085:21;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14604783	14669254	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=intron:HG00140_ch_T0001085:21;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14669255	14669318	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=exon:HG00140_ch_T0001085:22;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14669255	14669318	.	-	1	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=CDS:HG00140_ch_T0001085:22;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14669319	14669514	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=intron:HG00140_ch_T0001085:22;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14669515	14669666	.	-	.	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=exon:HG00140_ch_T0001085:23;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14669515	14669666	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=CDS:HG00140_ch_T0001085:23;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	14669664	14669666	.	-	0	source_transcript=ENST00000618474.5;source_transcript_name=UTY-215;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618474.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000618474.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000618474.5,ENST00000618474.5;transcript_id=HG00140_ch_T0001085;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001085;transcript_name=HG00140_ch_T0001085;gene_name=UTY;ID=start_codon:HG00140_ch_T0001085;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	14439843	14669666	100	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_G0000348;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=HG00140_ch_T0001086;Name=UTY
HG00140_chrY	CAT	exon	14439843	14439869	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=exon:HG00140_ch_T0001086:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14439843	14439869	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=CDS:HG00140_ch_T0001086:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	14439843	14439845	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=stop_codon:HG00140_ch_T0001086;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14439870	14450264	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=intron:HG00140_ch_T0001086:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14450265	14450391	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=exon:HG00140_ch_T0001086:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14450265	14450391	.	-	1	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=CDS:HG00140_ch_T0001086:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14450392	14487693	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=intron:HG00140_ch_T0001086:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14487694	14487835	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=exon:HG00140_ch_T0001086:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14487694	14487835	.	-	2	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=CDS:HG00140_ch_T0001086:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14487836	14488943	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=intron:HG00140_ch_T0001086:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14488944	14489131	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=exon:HG00140_ch_T0001086:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14488944	14489131	.	-	1	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=CDS:HG00140_ch_T0001086:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14489132	14492863	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=intron:HG00140_ch_T0001086:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14492864	14492978	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=exon:HG00140_ch_T0001086:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14492864	14492978	.	-	2	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=CDS:HG00140_ch_T0001086:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14492979	14495385	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=intron:HG00140_ch_T0001086:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14495386	14495534	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=exon:HG00140_ch_T0001086:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14495386	14495534	.	-	1	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=CDS:HG00140_ch_T0001086:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14495535	14496024	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=intron:HG00140_ch_T0001086:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14496025	14496099	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=exon:HG00140_ch_T0001086:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14496025	14496099	.	-	1	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=CDS:HG00140_ch_T0001086:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14496100	14496172	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=intron:HG00140_ch_T0001086:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14496173	14496237	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=exon:HG00140_ch_T0001086:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14496173	14496237	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=CDS:HG00140_ch_T0001086:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14496238	14513543	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=intron:HG00140_ch_T0001086:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14513544	14513749	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=exon:HG00140_ch_T0001086:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14513544	14513749	.	-	2	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=CDS:HG00140_ch_T0001086:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14513750	14514589	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=intron:HG00140_ch_T0001086:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14514590	14514695	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=exon:HG00140_ch_T0001086:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14514590	14514695	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=CDS:HG00140_ch_T0001086:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14514696	14516209	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=intron:HG00140_ch_T0001086:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14516210	14516339	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=exon:HG00140_ch_T0001086:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14516210	14516339	.	-	1	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=CDS:HG00140_ch_T0001086:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14516340	14525551	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=intron:HG00140_ch_T0001086:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14525552	14526324	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=exon:HG00140_ch_T0001086:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14525552	14526324	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=CDS:HG00140_ch_T0001086:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14526325	14545363	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=intron:HG00140_ch_T0001086:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14545364	14545387	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=exon:HG00140_ch_T0001086:12;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14545364	14545387	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=CDS:HG00140_ch_T0001086:12;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14545388	14545911	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=intron:HG00140_ch_T0001086:12;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14545912	14546007	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=exon:HG00140_ch_T0001086:13;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14545912	14546007	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=CDS:HG00140_ch_T0001086:13;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14546008	14547865	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=intron:HG00140_ch_T0001086:13;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14547866	14547958	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=exon:HG00140_ch_T0001086:14;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14547866	14547958	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=CDS:HG00140_ch_T0001086:14;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14547959	14549076	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=intron:HG00140_ch_T0001086:14;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14549077	14549211	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=exon:HG00140_ch_T0001086:15;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14549077	14549211	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=CDS:HG00140_ch_T0001086:15;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14549212	14549755	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=intron:HG00140_ch_T0001086:15;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14549756	14549975	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=exon:HG00140_ch_T0001086:16;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14549756	14549975	.	-	1	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=CDS:HG00140_ch_T0001086:16;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14549976	14550418	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=intron:HG00140_ch_T0001086:16;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14550419	14550517	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=exon:HG00140_ch_T0001086:17;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14550419	14550517	.	-	1	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=CDS:HG00140_ch_T0001086:17;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14550518	14556255	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=intron:HG00140_ch_T0001086:17;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14556256	14556382	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=exon:HG00140_ch_T0001086:18;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14556256	14556382	.	-	2	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=CDS:HG00140_ch_T0001086:18;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14556383	14559244	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=intron:HG00140_ch_T0001086:18;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14559245	14559338	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=exon:HG00140_ch_T0001086:19;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14559245	14559338	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=CDS:HG00140_ch_T0001086:19;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14559339	14583847	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=intron:HG00140_ch_T0001086:19;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14583848	14583882	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=exon:HG00140_ch_T0001086:20;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14583848	14583882	.	-	2	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=CDS:HG00140_ch_T0001086:20;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14583883	14586906	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=intron:HG00140_ch_T0001086:20;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14586907	14586961	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=exon:HG00140_ch_T0001086:21;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14586907	14586961	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=CDS:HG00140_ch_T0001086:21;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14586962	14600981	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=intron:HG00140_ch_T0001086:21;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14600982	14601102	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=exon:HG00140_ch_T0001086:22;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14600982	14601102	.	-	1	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=CDS:HG00140_ch_T0001086:22;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14601103	14604723	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=intron:HG00140_ch_T0001086:22;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14604724	14604782	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=exon:HG00140_ch_T0001086:23;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14604724	14604782	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=CDS:HG00140_ch_T0001086:23;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14604783	14639017	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=intron:HG00140_ch_T0001086:23;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14639018	14639067	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=exon:HG00140_ch_T0001086:24;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14639018	14639067	.	-	2	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=CDS:HG00140_ch_T0001086:24;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14639068	14660121	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=intron:HG00140_ch_T0001086:24;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14660122	14660230	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=exon:HG00140_ch_T0001086:25;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14660122	14660230	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=CDS:HG00140_ch_T0001086:25;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14660231	14669254	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=intron:HG00140_ch_T0001086:25;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14669255	14669318	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=exon:HG00140_ch_T0001086:26;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14669255	14669318	.	-	1	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=CDS:HG00140_ch_T0001086:26;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14669319	14669514	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=intron:HG00140_ch_T0001086:26;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14669515	14669666	.	-	.	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=exon:HG00140_ch_T0001086:27;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14669515	14669666	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=CDS:HG00140_ch_T0001086:27;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	14669664	14669666	.	-	0	source_transcript=ENST00000624098.3;source_transcript_name=UTY-216;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000624098.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000624098.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000624098.3,ENST00000624098.3;transcript_id=HG00140_ch_T0001086;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001086;transcript_name=HG00140_ch_T0001086;gene_name=UTY;ID=start_codon:HG00140_ch_T0001086;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	14439843	14669666	100	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_G0000348;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=HG00140_ch_T0001087;Name=UTY
HG00140_chrY	CAT	exon	14439843	14439869	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=exon:HG00140_ch_T0001087:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14439843	14439869	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=CDS:HG00140_ch_T0001087:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	14439843	14439845	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=stop_codon:HG00140_ch_T0001087;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14439870	14441003	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=intron:HG00140_ch_T0001087:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14441004	14441174	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=exon:HG00140_ch_T0001087:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14441004	14441174	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=CDS:HG00140_ch_T0001087:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14441175	14450264	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=intron:HG00140_ch_T0001087:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14450265	14450391	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=exon:HG00140_ch_T0001087:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14450265	14450391	.	-	1	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=CDS:HG00140_ch_T0001087:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14450392	14487693	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=intron:HG00140_ch_T0001087:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14487694	14487835	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=exon:HG00140_ch_T0001087:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14487694	14487835	.	-	2	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=CDS:HG00140_ch_T0001087:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14487836	14488943	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=intron:HG00140_ch_T0001087:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14488944	14489131	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=exon:HG00140_ch_T0001087:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14488944	14489131	.	-	1	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=CDS:HG00140_ch_T0001087:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14489132	14492863	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=intron:HG00140_ch_T0001087:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14492864	14492978	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=exon:HG00140_ch_T0001087:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14492864	14492978	.	-	2	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=CDS:HG00140_ch_T0001087:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14492979	14495385	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=intron:HG00140_ch_T0001087:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14495386	14495534	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=exon:HG00140_ch_T0001087:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14495386	14495534	.	-	1	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=CDS:HG00140_ch_T0001087:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14495535	14496024	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=intron:HG00140_ch_T0001087:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14496025	14496099	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=exon:HG00140_ch_T0001087:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14496025	14496099	.	-	1	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=CDS:HG00140_ch_T0001087:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14496100	14496172	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=intron:HG00140_ch_T0001087:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14496173	14496237	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=exon:HG00140_ch_T0001087:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14496173	14496237	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=CDS:HG00140_ch_T0001087:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14496238	14513543	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=intron:HG00140_ch_T0001087:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14513544	14513749	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=exon:HG00140_ch_T0001087:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14513544	14513749	.	-	2	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=CDS:HG00140_ch_T0001087:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14513750	14514589	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=intron:HG00140_ch_T0001087:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14514590	14514695	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=exon:HG00140_ch_T0001087:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14514590	14514695	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=CDS:HG00140_ch_T0001087:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14514696	14516209	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=intron:HG00140_ch_T0001087:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14516210	14516339	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=exon:HG00140_ch_T0001087:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14516210	14516339	.	-	1	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=CDS:HG00140_ch_T0001087:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14516340	14525551	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=intron:HG00140_ch_T0001087:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14525552	14526324	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=exon:HG00140_ch_T0001087:12;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14525552	14526324	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=CDS:HG00140_ch_T0001087:12;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14526325	14544991	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=intron:HG00140_ch_T0001087:12;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14544992	14545387	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=exon:HG00140_ch_T0001087:13;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14544992	14545387	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=CDS:HG00140_ch_T0001087:13;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14545388	14545911	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=intron:HG00140_ch_T0001087:13;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14545912	14546007	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=exon:HG00140_ch_T0001087:14;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14545912	14546007	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=CDS:HG00140_ch_T0001087:14;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14546008	14547865	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=intron:HG00140_ch_T0001087:14;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14547866	14547958	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=exon:HG00140_ch_T0001087:15;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14547866	14547958	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=CDS:HG00140_ch_T0001087:15;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14547959	14549076	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=intron:HG00140_ch_T0001087:15;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14549077	14549211	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=exon:HG00140_ch_T0001087:16;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14549077	14549211	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=CDS:HG00140_ch_T0001087:16;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14549212	14549755	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=intron:HG00140_ch_T0001087:16;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14549756	14549975	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=exon:HG00140_ch_T0001087:17;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14549756	14549975	.	-	1	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=CDS:HG00140_ch_T0001087:17;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14549976	14550418	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=intron:HG00140_ch_T0001087:17;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14550419	14550517	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=exon:HG00140_ch_T0001087:18;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14550419	14550517	.	-	1	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=CDS:HG00140_ch_T0001087:18;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14550518	14556255	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=intron:HG00140_ch_T0001087:18;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14556256	14556382	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=exon:HG00140_ch_T0001087:19;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14556256	14556382	.	-	2	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=CDS:HG00140_ch_T0001087:19;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14556383	14559244	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=intron:HG00140_ch_T0001087:19;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14559245	14559338	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=exon:HG00140_ch_T0001087:20;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14559245	14559338	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=CDS:HG00140_ch_T0001087:20;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14559339	14583847	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=intron:HG00140_ch_T0001087:20;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14583848	14583882	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=exon:HG00140_ch_T0001087:21;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14583848	14583882	.	-	2	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=CDS:HG00140_ch_T0001087:21;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14583883	14586906	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=intron:HG00140_ch_T0001087:21;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14586907	14586961	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=exon:HG00140_ch_T0001087:22;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14586907	14586961	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=CDS:HG00140_ch_T0001087:22;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14586962	14600981	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=intron:HG00140_ch_T0001087:22;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14600982	14601102	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=exon:HG00140_ch_T0001087:23;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14600982	14601102	.	-	1	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=CDS:HG00140_ch_T0001087:23;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14601103	14604723	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=intron:HG00140_ch_T0001087:23;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14604724	14604782	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=exon:HG00140_ch_T0001087:24;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14604724	14604782	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=CDS:HG00140_ch_T0001087:24;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14604783	14639017	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=intron:HG00140_ch_T0001087:24;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14639018	14639067	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=exon:HG00140_ch_T0001087:25;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14639018	14639067	.	-	2	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=CDS:HG00140_ch_T0001087:25;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14639068	14660121	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=intron:HG00140_ch_T0001087:25;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14660122	14660230	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=exon:HG00140_ch_T0001087:26;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14660122	14660230	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=CDS:HG00140_ch_T0001087:26;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14660231	14669254	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=intron:HG00140_ch_T0001087:26;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14669255	14669318	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=exon:HG00140_ch_T0001087:27;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14669255	14669318	.	-	1	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=CDS:HG00140_ch_T0001087:27;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14669319	14669514	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=intron:HG00140_ch_T0001087:27;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14669515	14669666	.	-	.	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=exon:HG00140_ch_T0001087:28;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14669515	14669666	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=CDS:HG00140_ch_T0001087:28;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	14669664	14669666	.	-	0	source_transcript=ENST00000682913.1;source_transcript_name=UTY-220;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682913.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000682913.1,ENST00000682913.1;transcript_id=HG00140_ch_T0001087;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001087;transcript_name=HG00140_ch_T0001087;gene_name=UTY;ID=start_codon:HG00140_ch_T0001087;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	14487428	14670671	100	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_G0000348;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=HG00140_ch_T0001089;Name=UTY
HG00140_chrY	CAT	exon	14487428	14487835	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=exon:HG00140_ch_T0001089:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14487690	14487835	.	-	2	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=CDS:HG00140_ch_T0001089:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	14487690	14487692	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=stop_codon:HG00140_ch_T0001089;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14487836	14488943	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=intron:HG00140_ch_T0001089:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14488944	14489131	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=exon:HG00140_ch_T0001089:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14488944	14489131	.	-	1	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=CDS:HG00140_ch_T0001089:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14489132	14492863	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=intron:HG00140_ch_T0001089:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14492864	14492978	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=exon:HG00140_ch_T0001089:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14492864	14492978	.	-	2	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=CDS:HG00140_ch_T0001089:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14492979	14495385	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=intron:HG00140_ch_T0001089:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14495386	14495534	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=exon:HG00140_ch_T0001089:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14495386	14495534	.	-	1	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=CDS:HG00140_ch_T0001089:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14495535	14496024	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=intron:HG00140_ch_T0001089:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14496025	14496099	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=exon:HG00140_ch_T0001089:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14496025	14496099	.	-	1	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=CDS:HG00140_ch_T0001089:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14496100	14496172	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=intron:HG00140_ch_T0001089:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14496173	14496237	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=exon:HG00140_ch_T0001089:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14496173	14496237	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=CDS:HG00140_ch_T0001089:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14496238	14513543	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=intron:HG00140_ch_T0001089:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14513544	14513749	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=exon:HG00140_ch_T0001089:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14513544	14513749	.	-	2	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=CDS:HG00140_ch_T0001089:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14513750	14514589	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=intron:HG00140_ch_T0001089:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14514590	14514695	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=exon:HG00140_ch_T0001089:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14514590	14514695	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=CDS:HG00140_ch_T0001089:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14514696	14516209	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=intron:HG00140_ch_T0001089:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14516210	14516339	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=exon:HG00140_ch_T0001089:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14516210	14516339	.	-	1	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=CDS:HG00140_ch_T0001089:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14516340	14525551	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=intron:HG00140_ch_T0001089:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14525552	14526324	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=exon:HG00140_ch_T0001089:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14525552	14526324	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=CDS:HG00140_ch_T0001089:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14526325	14544991	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=intron:HG00140_ch_T0001089:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14544992	14545387	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=exon:HG00140_ch_T0001089:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14544992	14545387	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=CDS:HG00140_ch_T0001089:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14545388	14545911	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=intron:HG00140_ch_T0001089:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14545912	14546007	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=exon:HG00140_ch_T0001089:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14545912	14546007	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=CDS:HG00140_ch_T0001089:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14546008	14547865	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=intron:HG00140_ch_T0001089:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14547866	14547958	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=exon:HG00140_ch_T0001089:12;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14547866	14547958	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=CDS:HG00140_ch_T0001089:12;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14547959	14549755	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=intron:HG00140_ch_T0001089:12;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14549756	14549975	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=exon:HG00140_ch_T0001089:13;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14549756	14549975	.	-	1	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=CDS:HG00140_ch_T0001089:13;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14549976	14550418	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=intron:HG00140_ch_T0001089:13;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14550419	14550517	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=exon:HG00140_ch_T0001089:14;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14550419	14550517	.	-	1	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=CDS:HG00140_ch_T0001089:14;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14550518	14556255	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=intron:HG00140_ch_T0001089:14;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14556256	14556382	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=exon:HG00140_ch_T0001089:15;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14556256	14556382	.	-	2	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=CDS:HG00140_ch_T0001089:15;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14556383	14559244	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=intron:HG00140_ch_T0001089:15;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14559245	14559338	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=exon:HG00140_ch_T0001089:16;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14559245	14559338	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=CDS:HG00140_ch_T0001089:16;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14559339	14583847	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=intron:HG00140_ch_T0001089:16;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14583848	14583882	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=exon:HG00140_ch_T0001089:17;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14583848	14583882	.	-	2	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=CDS:HG00140_ch_T0001089:17;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14583883	14586906	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=intron:HG00140_ch_T0001089:17;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14586907	14586961	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=exon:HG00140_ch_T0001089:18;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14586907	14586961	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=CDS:HG00140_ch_T0001089:18;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14586962	14600981	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=intron:HG00140_ch_T0001089:18;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14600982	14601102	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=exon:HG00140_ch_T0001089:19;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14600982	14601102	.	-	1	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=CDS:HG00140_ch_T0001089:19;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14601103	14604723	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=intron:HG00140_ch_T0001089:19;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14604724	14604782	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=exon:HG00140_ch_T0001089:20;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14604724	14604782	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=CDS:HG00140_ch_T0001089:20;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14604783	14639017	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=intron:HG00140_ch_T0001089:20;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14639018	14639067	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=exon:HG00140_ch_T0001089:21;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14639018	14639067	.	-	2	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=CDS:HG00140_ch_T0001089:21;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14639068	14660121	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=intron:HG00140_ch_T0001089:21;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14660122	14660230	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=exon:HG00140_ch_T0001089:22;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14660122	14660230	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=CDS:HG00140_ch_T0001089:22;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14660231	14669254	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=intron:HG00140_ch_T0001089:22;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14669255	14669318	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=exon:HG00140_ch_T0001089:23;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14669255	14669318	.	-	1	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=CDS:HG00140_ch_T0001089:23;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14669319	14669514	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=intron:HG00140_ch_T0001089:23;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14669515	14670671	.	-	.	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=exon:HG00140_ch_T0001089:24;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14669515	14669666	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=CDS:HG00140_ch_T0001089:24;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	14669664	14669666	.	-	0	source_transcript=ENST00000362096.8;source_transcript_name=UTY-203;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000362096.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000362096.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000362096.8,ENST00000362096.8;transcript_id=HG00140_ch_T0001089;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001089;transcript_name=HG00140_ch_T0001089;gene_name=UTY;ID=start_codon:HG00140_ch_T0001089;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	14513023	14670671	100	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_G0000348;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=HG00140_ch_T0001090;Name=UTY
HG00140_chrY	CAT	exon	14513023	14513357	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=exon:HG00140_ch_T0001090:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14513103	14513357	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=CDS:HG00140_ch_T0001090:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	14513103	14513105	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=stop_codon:HG00140_ch_T0001090;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14513358	14513543	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=intron:HG00140_ch_T0001090:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14513544	14513749	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=exon:HG00140_ch_T0001090:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14513544	14513749	.	-	2	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=CDS:HG00140_ch_T0001090:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14513750	14514589	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=intron:HG00140_ch_T0001090:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14514590	14514695	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=exon:HG00140_ch_T0001090:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14514590	14514695	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=CDS:HG00140_ch_T0001090:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14514696	14516209	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=intron:HG00140_ch_T0001090:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14516210	14516339	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=exon:HG00140_ch_T0001090:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14516210	14516339	.	-	1	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=CDS:HG00140_ch_T0001090:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14516340	14525551	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=intron:HG00140_ch_T0001090:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14525552	14526324	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=exon:HG00140_ch_T0001090:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14525552	14526324	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=CDS:HG00140_ch_T0001090:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14526325	14544991	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=intron:HG00140_ch_T0001090:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14544992	14545387	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=exon:HG00140_ch_T0001090:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14544992	14545387	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=CDS:HG00140_ch_T0001090:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14545388	14545911	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=intron:HG00140_ch_T0001090:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14545912	14546007	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=exon:HG00140_ch_T0001090:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14545912	14546007	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=CDS:HG00140_ch_T0001090:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14546008	14547865	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=intron:HG00140_ch_T0001090:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14547866	14547958	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=exon:HG00140_ch_T0001090:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14547866	14547958	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=CDS:HG00140_ch_T0001090:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14547959	14549755	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=intron:HG00140_ch_T0001090:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14549756	14549975	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=exon:HG00140_ch_T0001090:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14549756	14549975	.	-	1	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=CDS:HG00140_ch_T0001090:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14549976	14550418	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=intron:HG00140_ch_T0001090:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14550419	14550517	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=exon:HG00140_ch_T0001090:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14550419	14550517	.	-	1	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=CDS:HG00140_ch_T0001090:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14550518	14556255	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=intron:HG00140_ch_T0001090:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14556256	14556382	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=exon:HG00140_ch_T0001090:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14556256	14556382	.	-	2	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=CDS:HG00140_ch_T0001090:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14556383	14559244	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=intron:HG00140_ch_T0001090:10;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14559245	14559338	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=exon:HG00140_ch_T0001090:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14559245	14559338	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=CDS:HG00140_ch_T0001090:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14559339	14583847	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=intron:HG00140_ch_T0001090:11;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14583848	14583882	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=exon:HG00140_ch_T0001090:12;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14583848	14583882	.	-	2	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=CDS:HG00140_ch_T0001090:12;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14583883	14586906	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=intron:HG00140_ch_T0001090:12;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14586907	14586961	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=exon:HG00140_ch_T0001090:13;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14586907	14586961	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=CDS:HG00140_ch_T0001090:13;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14586962	14600981	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=intron:HG00140_ch_T0001090:13;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14600982	14601102	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=exon:HG00140_ch_T0001090:14;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14600982	14601102	.	-	1	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=CDS:HG00140_ch_T0001090:14;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14601103	14604723	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=intron:HG00140_ch_T0001090:14;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14604724	14604782	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=exon:HG00140_ch_T0001090:15;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14604724	14604782	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=CDS:HG00140_ch_T0001090:15;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14604783	14639017	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=intron:HG00140_ch_T0001090:15;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14639018	14639067	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=exon:HG00140_ch_T0001090:16;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14639018	14639067	.	-	2	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=CDS:HG00140_ch_T0001090:16;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14639068	14660121	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=intron:HG00140_ch_T0001090:16;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14660122	14660230	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=exon:HG00140_ch_T0001090:17;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14660122	14660230	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=CDS:HG00140_ch_T0001090:17;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14660231	14669254	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=intron:HG00140_ch_T0001090:17;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14669255	14669318	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=exon:HG00140_ch_T0001090:18;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14669255	14669318	.	-	1	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=CDS:HG00140_ch_T0001090:18;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14669319	14669514	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=intron:HG00140_ch_T0001090:18;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14669515	14670671	.	-	.	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=exon:HG00140_ch_T0001090:19;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14669515	14669666	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=CDS:HG00140_ch_T0001090:19;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	14669664	14669666	.	-	0	source_transcript=ENST00000329134.9;source_transcript_name=UTY-201;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000329134.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000329134.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000329134.9,ENST00000329134.9;transcript_id=HG00140_ch_T0001090;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001090;transcript_name=HG00140_ch_T0001090;gene_name=UTY;ID=start_codon:HG00140_ch_T0001090;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	14550477	14669541	1000	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00140_ch_T0001091;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_G0000348;transcript_name=HG00140_ch_T0001091;gene_name=UTY;ID=HG00140_ch_T0001091;Name=UTY
HG00140_chrY	CAT	exon	14550477	14550517	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00140_ch_T0001091;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001091;transcript_name=HG00140_ch_T0001091;gene_name=UTY;ID=exon:HG00140_ch_T0001091:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14550518	14556255	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00140_ch_T0001091;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001091;transcript_name=HG00140_ch_T0001091;gene_name=UTY;ID=intron:HG00140_ch_T0001091:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14556256	14556382	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00140_ch_T0001091;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001091;transcript_name=HG00140_ch_T0001091;gene_name=UTY;ID=exon:HG00140_ch_T0001091:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14556383	14559244	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00140_ch_T0001091;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001091;transcript_name=HG00140_ch_T0001091;gene_name=UTY;ID=intron:HG00140_ch_T0001091:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14559245	14559338	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00140_ch_T0001091;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001091;transcript_name=HG00140_ch_T0001091;gene_name=UTY;ID=exon:HG00140_ch_T0001091:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14559307	14559338	.	-	2	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00140_ch_T0001091;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001091;transcript_name=HG00140_ch_T0001091;gene_name=UTY;ID=CDS:HG00140_ch_T0001091:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	14559307	14559309	.	-	0	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00140_ch_T0001091;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001091;transcript_name=HG00140_ch_T0001091;gene_name=UTY;ID=stop_codon:HG00140_ch_T0001091;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14559339	14586906	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00140_ch_T0001091;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001091;transcript_name=HG00140_ch_T0001091;gene_name=UTY;ID=intron:HG00140_ch_T0001091:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14586907	14586961	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00140_ch_T0001091;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001091;transcript_name=HG00140_ch_T0001091;gene_name=UTY;ID=exon:HG00140_ch_T0001091:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14586907	14586961	.	-	0	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00140_ch_T0001091;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001091;transcript_name=HG00140_ch_T0001091;gene_name=UTY;ID=CDS:HG00140_ch_T0001091:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14586962	14600981	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00140_ch_T0001091;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001091;transcript_name=HG00140_ch_T0001091;gene_name=UTY;ID=intron:HG00140_ch_T0001091:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14600982	14601102	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00140_ch_T0001091;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001091;transcript_name=HG00140_ch_T0001091;gene_name=UTY;ID=exon:HG00140_ch_T0001091:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14600982	14601102	.	-	1	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00140_ch_T0001091;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001091;transcript_name=HG00140_ch_T0001091;gene_name=UTY;ID=CDS:HG00140_ch_T0001091:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14601103	14604723	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00140_ch_T0001091;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001091;transcript_name=HG00140_ch_T0001091;gene_name=UTY;ID=intron:HG00140_ch_T0001091:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14604724	14604782	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00140_ch_T0001091;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001091;transcript_name=HG00140_ch_T0001091;gene_name=UTY;ID=exon:HG00140_ch_T0001091:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14604724	14604782	.	-	0	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00140_ch_T0001091;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001091;transcript_name=HG00140_ch_T0001091;gene_name=UTY;ID=CDS:HG00140_ch_T0001091:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14604783	14639017	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00140_ch_T0001091;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001091;transcript_name=HG00140_ch_T0001091;gene_name=UTY;ID=intron:HG00140_ch_T0001091:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14639018	14639067	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00140_ch_T0001091;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001091;transcript_name=HG00140_ch_T0001091;gene_name=UTY;ID=exon:HG00140_ch_T0001091:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14639018	14639067	.	-	2	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00140_ch_T0001091;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001091;transcript_name=HG00140_ch_T0001091;gene_name=UTY;ID=CDS:HG00140_ch_T0001091:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14639068	14660121	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00140_ch_T0001091;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001091;transcript_name=HG00140_ch_T0001091;gene_name=UTY;ID=intron:HG00140_ch_T0001091:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14660122	14660230	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00140_ch_T0001091;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001091;transcript_name=HG00140_ch_T0001091;gene_name=UTY;ID=exon:HG00140_ch_T0001091:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14660122	14660230	.	-	0	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00140_ch_T0001091;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001091;transcript_name=HG00140_ch_T0001091;gene_name=UTY;ID=CDS:HG00140_ch_T0001091:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14660231	14669254	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00140_ch_T0001091;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001091;transcript_name=HG00140_ch_T0001091;gene_name=UTY;ID=intron:HG00140_ch_T0001091:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14669255	14669318	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00140_ch_T0001091;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001091;transcript_name=HG00140_ch_T0001091;gene_name=UTY;ID=exon:HG00140_ch_T0001091:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14669255	14669318	.	-	1	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00140_ch_T0001091;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001091;transcript_name=HG00140_ch_T0001091;gene_name=UTY;ID=CDS:HG00140_ch_T0001091:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14669319	14669514	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00140_ch_T0001091;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001091;transcript_name=HG00140_ch_T0001091;gene_name=UTY;ID=intron:HG00140_ch_T0001091:8;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14669515	14669541	.	-	.	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00140_ch_T0001091;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001091;transcript_name=HG00140_ch_T0001091;gene_name=UTY;ID=exon:HG00140_ch_T0001091:9;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14669515	14669541	.	-	1	source_transcript=ENST00000478900.5;source_transcript_name=UTY-207;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000478900.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000478900.5;transcript_score=300.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000478900.5,ENST00000478900.5;transcript_id=HG00140_ch_T0001091;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001091;transcript_name=HG00140_ch_T0001091;gene_name=UTY;ID=CDS:HG00140_ch_T0001091:7;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	14583141	14669505	1000	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=HG00140_ch_T0001092;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_G0000348;transcript_name=HG00140_ch_T0001092;gene_name=UTY;ID=HG00140_ch_T0001092;Name=UTY
HG00140_chrY	CAT	exon	14583141	14583882	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=HG00140_ch_T0001092;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001092;transcript_name=HG00140_ch_T0001092;gene_name=UTY;ID=exon:HG00140_ch_T0001092:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14583883	14586906	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=HG00140_ch_T0001092;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001092;transcript_name=HG00140_ch_T0001092;gene_name=UTY;ID=intron:HG00140_ch_T0001092:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14586907	14586961	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=HG00140_ch_T0001092;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001092;transcript_name=HG00140_ch_T0001092;gene_name=UTY;ID=exon:HG00140_ch_T0001092:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14586962	14600981	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=HG00140_ch_T0001092;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001092;transcript_name=HG00140_ch_T0001092;gene_name=UTY;ID=intron:HG00140_ch_T0001092:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14600982	14601102	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=HG00140_ch_T0001092;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001092;transcript_name=HG00140_ch_T0001092;gene_name=UTY;ID=exon:HG00140_ch_T0001092:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14601103	14604723	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=HG00140_ch_T0001092;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001092;transcript_name=HG00140_ch_T0001092;gene_name=UTY;ID=intron:HG00140_ch_T0001092:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14604724	14604782	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=HG00140_ch_T0001092;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001092;transcript_name=HG00140_ch_T0001092;gene_name=UTY;ID=exon:HG00140_ch_T0001092:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14604783	14639017	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=HG00140_ch_T0001092;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001092;transcript_name=HG00140_ch_T0001092;gene_name=UTY;ID=intron:HG00140_ch_T0001092:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14639018	14639067	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=HG00140_ch_T0001092;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001092;transcript_name=HG00140_ch_T0001092;gene_name=UTY;ID=exon:HG00140_ch_T0001092:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14639068	14660121	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=HG00140_ch_T0001092;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001092;transcript_name=HG00140_ch_T0001092;gene_name=UTY;ID=intron:HG00140_ch_T0001092:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14660122	14660230	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=HG00140_ch_T0001092;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001092;transcript_name=HG00140_ch_T0001092;gene_name=UTY;ID=exon:HG00140_ch_T0001092:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14660231	14669254	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=HG00140_ch_T0001092;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001092;transcript_name=HG00140_ch_T0001092;gene_name=UTY;ID=intron:HG00140_ch_T0001092:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14669255	14669505	.	-	.	source_transcript=ENST00000474365.1;source_transcript_name=UTY-206;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000474365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000474365.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000474365.1,ENST00000474365.1;transcript_id=HG00140_ch_T0001092;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001092;transcript_name=HG00140_ch_T0001092;gene_name=UTY;ID=exon:HG00140_ch_T0001092:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	14586291	14669979	100	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG00140_ch_T0001093;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_G0000348;transcript_name=HG00140_ch_T0001093;gene_name=UTY;ID=HG00140_ch_T0001093;Name=UTY
HG00140_chrY	CAT	exon	14586291	14586961	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG00140_ch_T0001093;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001093;transcript_name=HG00140_ch_T0001093;gene_name=UTY;ID=exon:HG00140_ch_T0001093:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14586893	14586961	.	-	0	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG00140_ch_T0001093;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001093;transcript_name=HG00140_ch_T0001093;gene_name=UTY;ID=CDS:HG00140_ch_T0001093:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	14586893	14586895	.	-	0	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG00140_ch_T0001093;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001093;transcript_name=HG00140_ch_T0001093;gene_name=UTY;ID=stop_codon:HG00140_ch_T0001093;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14586962	14600981	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG00140_ch_T0001093;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001093;transcript_name=HG00140_ch_T0001093;gene_name=UTY;ID=intron:HG00140_ch_T0001093:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14600982	14601102	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG00140_ch_T0001093;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001093;transcript_name=HG00140_ch_T0001093;gene_name=UTY;ID=exon:HG00140_ch_T0001093:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14600982	14601102	.	-	1	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG00140_ch_T0001093;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001093;transcript_name=HG00140_ch_T0001093;gene_name=UTY;ID=CDS:HG00140_ch_T0001093:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14601103	14604723	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG00140_ch_T0001093;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001093;transcript_name=HG00140_ch_T0001093;gene_name=UTY;ID=intron:HG00140_ch_T0001093:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14604724	14604782	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG00140_ch_T0001093;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001093;transcript_name=HG00140_ch_T0001093;gene_name=UTY;ID=exon:HG00140_ch_T0001093:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14604724	14604782	.	-	0	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG00140_ch_T0001093;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001093;transcript_name=HG00140_ch_T0001093;gene_name=UTY;ID=CDS:HG00140_ch_T0001093:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14604783	14639017	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG00140_ch_T0001093;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001093;transcript_name=HG00140_ch_T0001093;gene_name=UTY;ID=intron:HG00140_ch_T0001093:2;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14639018	14639067	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG00140_ch_T0001093;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001093;transcript_name=HG00140_ch_T0001093;gene_name=UTY;ID=exon:HG00140_ch_T0001093:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14639018	14639067	.	-	2	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG00140_ch_T0001093;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001093;transcript_name=HG00140_ch_T0001093;gene_name=UTY;ID=CDS:HG00140_ch_T0001093:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14639068	14660121	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG00140_ch_T0001093;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001093;transcript_name=HG00140_ch_T0001093;gene_name=UTY;ID=intron:HG00140_ch_T0001093:3;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14660122	14660230	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG00140_ch_T0001093;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001093;transcript_name=HG00140_ch_T0001093;gene_name=UTY;ID=exon:HG00140_ch_T0001093:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14660122	14660230	.	-	0	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG00140_ch_T0001093;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001093;transcript_name=HG00140_ch_T0001093;gene_name=UTY;ID=CDS:HG00140_ch_T0001093:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14660231	14669254	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG00140_ch_T0001093;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001093;transcript_name=HG00140_ch_T0001093;gene_name=UTY;ID=intron:HG00140_ch_T0001093:4;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14669255	14669318	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG00140_ch_T0001093;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001093;transcript_name=HG00140_ch_T0001093;gene_name=UTY;ID=exon:HG00140_ch_T0001093:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14669255	14669318	.	-	1	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG00140_ch_T0001093;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001093;transcript_name=HG00140_ch_T0001093;gene_name=UTY;ID=CDS:HG00140_ch_T0001093:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14669319	14669514	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG00140_ch_T0001093;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001093;transcript_name=HG00140_ch_T0001093;gene_name=UTY;ID=intron:HG00140_ch_T0001093:5;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14669515	14669979	.	-	.	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG00140_ch_T0001093;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001093;transcript_name=HG00140_ch_T0001093;gene_name=UTY;ID=exon:HG00140_ch_T0001093:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14669515	14669666	.	-	0	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG00140_ch_T0001093;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001093;transcript_name=HG00140_ch_T0001093;gene_name=UTY;ID=CDS:HG00140_ch_T0001093:6;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	14669664	14669666	.	-	0	source_transcript=ENST00000382893.2;source_transcript_name=UTY-204;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382893.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382893.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000382893.2,ENST00000382893.2;transcript_id=HG00140_ch_T0001093;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001093;transcript_name=HG00140_ch_T0001093;gene_name=UTY;ID=start_codon:HG00140_ch_T0001093;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	14669043	14669924	1000	-	.	source_transcript=ENST00000479713.1;source_transcript_name=UTY-208;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000479713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000479713.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000479713.1,ENST00000479713.1;transcript_id=HG00140_ch_T0001094;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_G0000348;transcript_name=HG00140_ch_T0001094;gene_name=UTY;ID=HG00140_ch_T0001094;Name=UTY
HG00140_chrY	CAT	exon	14669043	14669318	.	-	.	source_transcript=ENST00000479713.1;source_transcript_name=UTY-208;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000479713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000479713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000479713.1,ENST00000479713.1;transcript_id=HG00140_ch_T0001094;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001094;transcript_name=HG00140_ch_T0001094;gene_name=UTY;ID=exon:HG00140_ch_T0001094:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14669319	14669514	.	-	.	source_transcript=ENST00000479713.1;source_transcript_name=UTY-208;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000479713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000479713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000479713.1,ENST00000479713.1;transcript_id=HG00140_ch_T0001094;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001094;transcript_name=HG00140_ch_T0001094;gene_name=UTY;ID=intron:HG00140_ch_T0001094:0;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14669515	14669924	.	-	.	source_transcript=ENST00000479713.1;source_transcript_name=UTY-208;source_gene=ENSG00000183878.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183878.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000479713.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000479713.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=ENST00000479713.1,ENST00000479713.1;transcript_id=HG00140_ch_T0001094;gene_id=HG00140_ch_G0000348;Parent=HG00140_ch_T0001094;transcript_name=HG00140_ch_T0001094;gene_name=UTY;ID=exon:HG00140_ch_T0001094:1;Name=UTY;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	14476625	14477365	.	+	.	source_gene_common_name=PSMA6P1;source_gene=ENSG00000215414.4;alternative_source_transcripts=ENST00000400275.2,ENST00000400275.2;gene_id=HG00140_ch_G0000349;gene_biotype=processed_pseudogene;gene_name=PSMA6P1;gene_sources=liftoff;ID=HG00140_ch_G0000349;Name=PSMA6P1
HG00140_chrY	CAT	transcript	14476625	14477365	1000	+	.	source_transcript=ENST00000400275.2;source_transcript_name=PSMA6P1-201;source_gene=ENSG00000215414.4;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000215414.4;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000400275.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000400275.2;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PSMA6P1;alternative_source_transcripts=ENST00000400275.2,ENST00000400275.2;transcript_id=HG00140_ch_T0001088;gene_id=HG00140_ch_G0000349;Parent=HG00140_ch_G0000349;transcript_name=HG00140_ch_T0001088;gene_name=PSMA6P1;ID=HG00140_ch_T0001088;Name=PSMA6P1
HG00140_chrY	CAT	exon	14476625	14477365	.	+	.	source_transcript=ENST00000400275.2;source_transcript_name=PSMA6P1-201;source_gene=ENSG00000215414.4;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000215414.4;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000400275.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000400275.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PSMA6P1;alternative_source_transcripts=ENST00000400275.2,ENST00000400275.2;transcript_id=HG00140_ch_T0001088;gene_id=HG00140_ch_G0000349;Parent=HG00140_ch_T0001088;transcript_name=HG00140_ch_T0001088;gene_name=PSMA6P1;ID=exon:HG00140_ch_T0001088:0;Name=PSMA6P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	14755833	14816172	.	+	.	source_gene_common_name=ENSG00000297994;source_gene=ENSG00000297994.1;alternative_source_transcripts=ENST00000752374.1,ENST00000752374.1;gene_id=HG00140_ch_G0000350;gene_biotype=lncRNA;gene_name=ENSG00000297994;gene_sources=liftoff;ID=HG00140_ch_G0000350;Name=ENSG00000297994
HG00140_chrY	CAT	transcript	14755833	14816172	1000	+	.	source_transcript=ENST00000752374.1;source_transcript_name=ENST00000752374;source_gene=ENSG00000297994.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297994.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752374.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297994;alternative_source_transcripts=ENST00000752374.1,ENST00000752374.1;transcript_id=HG00140_ch_T0001095;gene_id=HG00140_ch_G0000350;Parent=HG00140_ch_G0000350;transcript_name=HG00140_ch_T0001095;gene_name=ENSG00000297994;ID=HG00140_ch_T0001095;Name=ENSG00000297994
HG00140_chrY	CAT	exon	14755833	14755876	.	+	.	source_transcript=ENST00000752374.1;source_transcript_name=ENST00000752374;source_gene=ENSG00000297994.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297994.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297994;alternative_source_transcripts=ENST00000752374.1,ENST00000752374.1;transcript_id=HG00140_ch_T0001095;gene_id=HG00140_ch_G0000350;Parent=HG00140_ch_T0001095;transcript_name=HG00140_ch_T0001095;gene_name=ENSG00000297994;ID=exon:HG00140_ch_T0001095:0;Name=ENSG00000297994;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14755877	14756645	.	+	.	source_transcript=ENST00000752374.1;source_transcript_name=ENST00000752374;source_gene=ENSG00000297994.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297994.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297994;alternative_source_transcripts=ENST00000752374.1,ENST00000752374.1;transcript_id=HG00140_ch_T0001095;gene_id=HG00140_ch_G0000350;Parent=HG00140_ch_T0001095;transcript_name=HG00140_ch_T0001095;gene_name=ENSG00000297994;ID=intron:HG00140_ch_T0001095:0;Name=ENSG00000297994;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14756646	14756717	.	+	.	source_transcript=ENST00000752374.1;source_transcript_name=ENST00000752374;source_gene=ENSG00000297994.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297994.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297994;alternative_source_transcripts=ENST00000752374.1,ENST00000752374.1;transcript_id=HG00140_ch_T0001095;gene_id=HG00140_ch_G0000350;Parent=HG00140_ch_T0001095;transcript_name=HG00140_ch_T0001095;gene_name=ENSG00000297994;ID=exon:HG00140_ch_T0001095:1;Name=ENSG00000297994;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14756718	14815851	.	+	.	source_transcript=ENST00000752374.1;source_transcript_name=ENST00000752374;source_gene=ENSG00000297994.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297994.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297994;alternative_source_transcripts=ENST00000752374.1,ENST00000752374.1;transcript_id=HG00140_ch_T0001095;gene_id=HG00140_ch_G0000350;Parent=HG00140_ch_T0001095;transcript_name=HG00140_ch_T0001095;gene_name=ENSG00000297994;ID=intron:HG00140_ch_T0001095:1;Name=ENSG00000297994;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14815852	14816172	.	+	.	source_transcript=ENST00000752374.1;source_transcript_name=ENST00000752374;source_gene=ENSG00000297994.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297994.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297994;alternative_source_transcripts=ENST00000752374.1,ENST00000752374.1;transcript_id=HG00140_ch_T0001095;gene_id=HG00140_ch_G0000350;Parent=HG00140_ch_T0001095;transcript_name=HG00140_ch_T0001095;gene_name=ENSG00000297994;ID=exon:HG00140_ch_T0001095:2;Name=ENSG00000297994;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	14893770	14895895	.	+	.	source_gene_common_name=TMSB4Y;source_gene=ENSG00000154620.6;alternative_source_transcripts=ENST00000284856.4,ENST00000284856.4;gene_id=HG00140_ch_G0000351;gene_biotype=protein_coding;gene_name=TMSB4Y;gene_sources=liftoff;ID=HG00140_ch_G0000351;Name=TMSB4Y
HG00140_chrY	CAT	transcript	14893770	14895895	100	+	.	source_transcript=ENST00000284856.4;source_transcript_name=TMSB4Y-201;source_gene=ENSG00000154620.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000154620.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000284856.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000284856.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=ENST00000284856.4,ENST00000284856.4;transcript_id=HG00140_ch_T0001096;gene_id=HG00140_ch_G0000351;Parent=HG00140_ch_G0000351;transcript_name=HG00140_ch_T0001096;gene_name=TMSB4Y;ID=HG00140_ch_T0001096;Name=TMSB4Y
HG00140_chrY	CAT	exon	14893770	14894306	.	+	.	source_transcript=ENST00000284856.4;source_transcript_name=TMSB4Y-201;source_gene=ENSG00000154620.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000154620.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000284856.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000284856.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=ENST00000284856.4,ENST00000284856.4;transcript_id=HG00140_ch_T0001096;gene_id=HG00140_ch_G0000351;Parent=HG00140_ch_T0001096;transcript_name=HG00140_ch_T0001096;gene_name=TMSB4Y;ID=exon:HG00140_ch_T0001096:0;Name=TMSB4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14894207	14894306	.	+	0	source_transcript=ENST00000284856.4;source_transcript_name=TMSB4Y-201;source_gene=ENSG00000154620.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000154620.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000284856.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000284856.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=ENST00000284856.4,ENST00000284856.4;transcript_id=HG00140_ch_T0001096;gene_id=HG00140_ch_G0000351;Parent=HG00140_ch_T0001096;transcript_name=HG00140_ch_T0001096;gene_name=TMSB4Y;ID=CDS:HG00140_ch_T0001096:0;Name=TMSB4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	14894207	14894209	.	+	0	source_transcript=ENST00000284856.4;source_transcript_name=TMSB4Y-201;source_gene=ENSG00000154620.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000154620.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000284856.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000284856.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=ENST00000284856.4,ENST00000284856.4;transcript_id=HG00140_ch_T0001096;gene_id=HG00140_ch_G0000351;Parent=HG00140_ch_T0001096;transcript_name=HG00140_ch_T0001096;gene_name=TMSB4Y;ID=start_codon:HG00140_ch_T0001096;Name=TMSB4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14894307	14895095	.	+	.	source_transcript=ENST00000284856.4;source_transcript_name=TMSB4Y-201;source_gene=ENSG00000154620.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000154620.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000284856.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000284856.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=ENST00000284856.4,ENST00000284856.4;transcript_id=HG00140_ch_T0001096;gene_id=HG00140_ch_G0000351;Parent=HG00140_ch_T0001096;transcript_name=HG00140_ch_T0001096;gene_name=TMSB4Y;ID=intron:HG00140_ch_T0001096:0;Name=TMSB4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14895096	14895895	.	+	.	source_transcript=ENST00000284856.4;source_transcript_name=TMSB4Y-201;source_gene=ENSG00000154620.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000154620.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000284856.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000284856.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=ENST00000284856.4,ENST00000284856.4;transcript_id=HG00140_ch_T0001096;gene_id=HG00140_ch_G0000351;Parent=HG00140_ch_T0001096;transcript_name=HG00140_ch_T0001096;gene_name=TMSB4Y;ID=exon:HG00140_ch_T0001096:1;Name=TMSB4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	14895096	14895130	.	+	2	source_transcript=ENST00000284856.4;source_transcript_name=TMSB4Y-201;source_gene=ENSG00000154620.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000154620.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000284856.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000284856.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=ENST00000284856.4,ENST00000284856.4;transcript_id=HG00140_ch_T0001096;gene_id=HG00140_ch_G0000351;Parent=HG00140_ch_T0001096;transcript_name=HG00140_ch_T0001096;gene_name=TMSB4Y;ID=CDS:HG00140_ch_T0001096:1;Name=TMSB4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	14895128	14895130	.	+	0	source_transcript=ENST00000284856.4;source_transcript_name=TMSB4Y-201;source_gene=ENSG00000154620.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000154620.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000284856.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000284856.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=ENST00000284856.4,ENST00000284856.4;transcript_id=HG00140_ch_T0001096;gene_id=HG00140_ch_G0000351;Parent=HG00140_ch_T0001096;transcript_name=HG00140_ch_T0001096;gene_name=TMSB4Y;ID=stop_codon:HG00140_ch_T0001096;Name=TMSB4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	14893773	15106147	.	+	.	source_gene_common_name=ENSG00000290853;source_gene=ENSG00000290853.2;gene_id=HG00140_ch_G0000352;gene_biotype=lncRNA;gene_name=ENSG00000290853;gene_sources=liftoff;ID=HG00140_ch_G0000352;Name=ENSG00000290853
HG00140_chrY	CAT	transcript	14893773	15078876	1000	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG00140_ch_T0001097;gene_id=HG00140_ch_G0000352;Parent=HG00140_ch_G0000352;transcript_name=HG00140_ch_T0001097;gene_name=ENSG00000290853;ID=HG00140_ch_T0001097;Name=ENSG00000290853
HG00140_chrY	CAT	exon	14893773	14894306	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG00140_ch_T0001097;gene_id=HG00140_ch_G0000352;Parent=HG00140_ch_T0001097;transcript_name=HG00140_ch_T0001097;gene_name=ENSG00000290853;ID=exon:HG00140_ch_T0001097:0;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14894307	14944509	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG00140_ch_T0001097;gene_id=HG00140_ch_G0000352;Parent=HG00140_ch_T0001097;transcript_name=HG00140_ch_T0001097;gene_name=ENSG00000290853;ID=intron:HG00140_ch_T0001097:0;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14944510	14944659	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG00140_ch_T0001097;gene_id=HG00140_ch_G0000352;Parent=HG00140_ch_T0001097;transcript_name=HG00140_ch_T0001097;gene_name=ENSG00000290853;ID=exon:HG00140_ch_T0001097:1;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14944660	15048409	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG00140_ch_T0001097;gene_id=HG00140_ch_G0000352;Parent=HG00140_ch_T0001097;transcript_name=HG00140_ch_T0001097;gene_name=ENSG00000290853;ID=intron:HG00140_ch_T0001097:1;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15048410	15048539	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG00140_ch_T0001097;gene_id=HG00140_ch_G0000352;Parent=HG00140_ch_T0001097;transcript_name=HG00140_ch_T0001097;gene_name=ENSG00000290853;ID=exon:HG00140_ch_T0001097:2;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15048540	15049560	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG00140_ch_T0001097;gene_id=HG00140_ch_G0000352;Parent=HG00140_ch_T0001097;transcript_name=HG00140_ch_T0001097;gene_name=ENSG00000290853;ID=intron:HG00140_ch_T0001097:2;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15049561	15049714	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG00140_ch_T0001097;gene_id=HG00140_ch_G0000352;Parent=HG00140_ch_T0001097;transcript_name=HG00140_ch_T0001097;gene_name=ENSG00000290853;ID=exon:HG00140_ch_T0001097:3;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15049715	15058959	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG00140_ch_T0001097;gene_id=HG00140_ch_G0000352;Parent=HG00140_ch_T0001097;transcript_name=HG00140_ch_T0001097;gene_name=ENSG00000290853;ID=intron:HG00140_ch_T0001097:3;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15058960	15059021	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG00140_ch_T0001097;gene_id=HG00140_ch_G0000352;Parent=HG00140_ch_T0001097;transcript_name=HG00140_ch_T0001097;gene_name=ENSG00000290853;ID=exon:HG00140_ch_T0001097:4;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15059022	15061525	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG00140_ch_T0001097;gene_id=HG00140_ch_G0000352;Parent=HG00140_ch_T0001097;transcript_name=HG00140_ch_T0001097;gene_name=ENSG00000290853;ID=intron:HG00140_ch_T0001097:4;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15061526	15061691	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG00140_ch_T0001097;gene_id=HG00140_ch_G0000352;Parent=HG00140_ch_T0001097;transcript_name=HG00140_ch_T0001097;gene_name=ENSG00000290853;ID=exon:HG00140_ch_T0001097:5;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15061692	15077153	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG00140_ch_T0001097;gene_id=HG00140_ch_G0000352;Parent=HG00140_ch_T0001097;transcript_name=HG00140_ch_T0001097;gene_name=ENSG00000290853;ID=intron:HG00140_ch_T0001097:5;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15077154	15078876	.	+	.	source_transcript=ENST00000652544.1;source_transcript_name=ENST00000652544;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG00140_ch_T0001097;gene_id=HG00140_ch_G0000352;Parent=HG00140_ch_T0001097;transcript_name=HG00140_ch_T0001097;gene_name=ENSG00000290853;ID=exon:HG00140_ch_T0001097:6;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	14941667	15048487	1000	+	.	source_transcript=ENST00000430079.5;source_transcript_name=ENST00000430079;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430079.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000430079.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG00140_ch_T0001099;gene_id=HG00140_ch_G0000352;Parent=HG00140_ch_G0000352;transcript_name=HG00140_ch_T0001099;gene_name=ENSG00000290853;ID=HG00140_ch_T0001099;Name=ENSG00000290853
HG00140_chrY	CAT	exon	14941667	14941879	.	+	.	source_transcript=ENST00000430079.5;source_transcript_name=ENST00000430079;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430079.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000430079.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG00140_ch_T0001099;gene_id=HG00140_ch_G0000352;Parent=HG00140_ch_T0001099;transcript_name=HG00140_ch_T0001099;gene_name=ENSG00000290853;ID=exon:HG00140_ch_T0001099:0;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14941880	14942967	.	+	.	source_transcript=ENST00000430079.5;source_transcript_name=ENST00000430079;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430079.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000430079.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG00140_ch_T0001099;gene_id=HG00140_ch_G0000352;Parent=HG00140_ch_T0001099;transcript_name=HG00140_ch_T0001099;gene_name=ENSG00000290853;ID=intron:HG00140_ch_T0001099:0;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14942968	14943033	.	+	.	source_transcript=ENST00000430079.5;source_transcript_name=ENST00000430079;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430079.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000430079.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG00140_ch_T0001099;gene_id=HG00140_ch_G0000352;Parent=HG00140_ch_T0001099;transcript_name=HG00140_ch_T0001099;gene_name=ENSG00000290853;ID=exon:HG00140_ch_T0001099:1;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14943034	14944509	.	+	.	source_transcript=ENST00000430079.5;source_transcript_name=ENST00000430079;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430079.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000430079.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG00140_ch_T0001099;gene_id=HG00140_ch_G0000352;Parent=HG00140_ch_T0001099;transcript_name=HG00140_ch_T0001099;gene_name=ENSG00000290853;ID=intron:HG00140_ch_T0001099:1;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14944510	14944659	.	+	.	source_transcript=ENST00000430079.5;source_transcript_name=ENST00000430079;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430079.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000430079.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG00140_ch_T0001099;gene_id=HG00140_ch_G0000352;Parent=HG00140_ch_T0001099;transcript_name=HG00140_ch_T0001099;gene_name=ENSG00000290853;ID=exon:HG00140_ch_T0001099:2;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14944660	14980787	.	+	.	source_transcript=ENST00000430079.5;source_transcript_name=ENST00000430079;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430079.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000430079.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG00140_ch_T0001099;gene_id=HG00140_ch_G0000352;Parent=HG00140_ch_T0001099;transcript_name=HG00140_ch_T0001099;gene_name=ENSG00000290853;ID=intron:HG00140_ch_T0001099:2;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14980788	14980835	.	+	.	source_transcript=ENST00000430079.5;source_transcript_name=ENST00000430079;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430079.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000430079.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG00140_ch_T0001099;gene_id=HG00140_ch_G0000352;Parent=HG00140_ch_T0001099;transcript_name=HG00140_ch_T0001099;gene_name=ENSG00000290853;ID=exon:HG00140_ch_T0001099:3;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14980836	15044337	.	+	.	source_transcript=ENST00000430079.5;source_transcript_name=ENST00000430079;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430079.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000430079.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG00140_ch_T0001099;gene_id=HG00140_ch_G0000352;Parent=HG00140_ch_T0001099;transcript_name=HG00140_ch_T0001099;gene_name=ENSG00000290853;ID=intron:HG00140_ch_T0001099:3;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15044338	15044471	.	+	.	source_transcript=ENST00000430079.5;source_transcript_name=ENST00000430079;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430079.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000430079.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG00140_ch_T0001099;gene_id=HG00140_ch_G0000352;Parent=HG00140_ch_T0001099;transcript_name=HG00140_ch_T0001099;gene_name=ENSG00000290853;ID=exon:HG00140_ch_T0001099:4;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15044472	15048409	.	+	.	source_transcript=ENST00000430079.5;source_transcript_name=ENST00000430079;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430079.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000430079.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG00140_ch_T0001099;gene_id=HG00140_ch_G0000352;Parent=HG00140_ch_T0001099;transcript_name=HG00140_ch_T0001099;gene_name=ENSG00000290853;ID=intron:HG00140_ch_T0001099:4;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15048410	15048487	.	+	.	source_transcript=ENST00000430079.5;source_transcript_name=ENST00000430079;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000430079.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000430079.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG00140_ch_T0001099;gene_id=HG00140_ch_G0000352;Parent=HG00140_ch_T0001099;transcript_name=HG00140_ch_T0001099;gene_name=ENSG00000290853;ID=exon:HG00140_ch_T0001099:5;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	14942972	15061599	1000	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG00140_ch_T0001100;gene_id=HG00140_ch_G0000352;Parent=HG00140_ch_G0000352;transcript_name=HG00140_ch_T0001100;gene_name=ENSG00000290853;ID=HG00140_ch_T0001100;Name=ENSG00000290853
HG00140_chrY	CAT	exon	14942972	14943033	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG00140_ch_T0001100;gene_id=HG00140_ch_G0000352;Parent=HG00140_ch_T0001100;transcript_name=HG00140_ch_T0001100;gene_name=ENSG00000290853;ID=exon:HG00140_ch_T0001100:0;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14943034	14944509	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG00140_ch_T0001100;gene_id=HG00140_ch_G0000352;Parent=HG00140_ch_T0001100;transcript_name=HG00140_ch_T0001100;gene_name=ENSG00000290853;ID=intron:HG00140_ch_T0001100:0;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14944510	14944659	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG00140_ch_T0001100;gene_id=HG00140_ch_G0000352;Parent=HG00140_ch_T0001100;transcript_name=HG00140_ch_T0001100;gene_name=ENSG00000290853;ID=exon:HG00140_ch_T0001100:1;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14944660	14980787	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG00140_ch_T0001100;gene_id=HG00140_ch_G0000352;Parent=HG00140_ch_T0001100;transcript_name=HG00140_ch_T0001100;gene_name=ENSG00000290853;ID=intron:HG00140_ch_T0001100:1;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14980788	14980835	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG00140_ch_T0001100;gene_id=HG00140_ch_G0000352;Parent=HG00140_ch_T0001100;transcript_name=HG00140_ch_T0001100;gene_name=ENSG00000290853;ID=exon:HG00140_ch_T0001100:2;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14980836	15048409	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG00140_ch_T0001100;gene_id=HG00140_ch_G0000352;Parent=HG00140_ch_T0001100;transcript_name=HG00140_ch_T0001100;gene_name=ENSG00000290853;ID=intron:HG00140_ch_T0001100:2;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15048410	15048539	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG00140_ch_T0001100;gene_id=HG00140_ch_G0000352;Parent=HG00140_ch_T0001100;transcript_name=HG00140_ch_T0001100;gene_name=ENSG00000290853;ID=exon:HG00140_ch_T0001100:3;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15048540	15049560	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG00140_ch_T0001100;gene_id=HG00140_ch_G0000352;Parent=HG00140_ch_T0001100;transcript_name=HG00140_ch_T0001100;gene_name=ENSG00000290853;ID=intron:HG00140_ch_T0001100:3;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15049561	15049714	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG00140_ch_T0001100;gene_id=HG00140_ch_G0000352;Parent=HG00140_ch_T0001100;transcript_name=HG00140_ch_T0001100;gene_name=ENSG00000290853;ID=exon:HG00140_ch_T0001100:4;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15049715	15058959	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG00140_ch_T0001100;gene_id=HG00140_ch_G0000352;Parent=HG00140_ch_T0001100;transcript_name=HG00140_ch_T0001100;gene_name=ENSG00000290853;ID=intron:HG00140_ch_T0001100:4;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15058960	15059021	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG00140_ch_T0001100;gene_id=HG00140_ch_G0000352;Parent=HG00140_ch_T0001100;transcript_name=HG00140_ch_T0001100;gene_name=ENSG00000290853;ID=exon:HG00140_ch_T0001100:5;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15059022	15061525	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG00140_ch_T0001100;gene_id=HG00140_ch_G0000352;Parent=HG00140_ch_T0001100;transcript_name=HG00140_ch_T0001100;gene_name=ENSG00000290853;ID=intron:HG00140_ch_T0001100:5;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15061526	15061599	.	+	.	source_transcript=ENST00000460561.1;source_transcript_name=ENST00000460561;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000460561.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000460561.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG00140_ch_T0001100;gene_id=HG00140_ch_G0000352;Parent=HG00140_ch_T0001100;transcript_name=HG00140_ch_T0001100;gene_name=ENSG00000290853;ID=exon:HG00140_ch_T0001100:6;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	15061575	15106147	1000	+	.	source_transcript=ENST00000766958.1;source_transcript_name=ENST00000766958;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766958.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG00140_ch_T0001101;gene_id=HG00140_ch_G0000352;Parent=HG00140_ch_G0000352;transcript_name=HG00140_ch_T0001101;gene_name=ENSG00000290853;ID=HG00140_ch_T0001101;Name=ENSG00000290853
HG00140_chrY	CAT	exon	15061575	15061691	.	+	.	source_transcript=ENST00000766958.1;source_transcript_name=ENST00000766958;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766958.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG00140_ch_T0001101;gene_id=HG00140_ch_G0000352;Parent=HG00140_ch_T0001101;transcript_name=HG00140_ch_T0001101;gene_name=ENSG00000290853;ID=exon:HG00140_ch_T0001101:0;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15061692	15077153	.	+	.	source_transcript=ENST00000766958.1;source_transcript_name=ENST00000766958;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766958.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG00140_ch_T0001101;gene_id=HG00140_ch_G0000352;Parent=HG00140_ch_T0001101;transcript_name=HG00140_ch_T0001101;gene_name=ENSG00000290853;ID=intron:HG00140_ch_T0001101:0;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15077154	15077359	.	+	.	source_transcript=ENST00000766958.1;source_transcript_name=ENST00000766958;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766958.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG00140_ch_T0001101;gene_id=HG00140_ch_G0000352;Parent=HG00140_ch_T0001101;transcript_name=HG00140_ch_T0001101;gene_name=ENSG00000290853;ID=exon:HG00140_ch_T0001101:1;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15077360	15105668	.	+	.	source_transcript=ENST00000766958.1;source_transcript_name=ENST00000766958;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766958.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG00140_ch_T0001101;gene_id=HG00140_ch_G0000352;Parent=HG00140_ch_T0001101;transcript_name=HG00140_ch_T0001101;gene_name=ENSG00000290853;ID=intron:HG00140_ch_T0001101:1;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15105669	15106147	.	+	.	source_transcript=ENST00000766958.1;source_transcript_name=ENST00000766958;source_gene=ENSG00000290853.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290853.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766958.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290853;transcript_id=HG00140_ch_T0001101;gene_id=HG00140_ch_G0000352;Parent=HG00140_ch_T0001101;transcript_name=HG00140_ch_T0001101;gene_name=ENSG00000290853;ID=exon:HG00140_ch_T0001101:2;Name=ENSG00000290853;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	14941530	15105727	.	+	.	source_gene_common_name=ANOS2P;source_gene=ENSG00000241859.8;gene_id=HG00140_ch_G0000353;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ANOS2P;gene_sources=liftoff;ID=HG00140_ch_G0000353;Name=ANOS2P
HG00140_chrY	CAT	transcript	14941530	15105727	1000	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG00140_ch_T0001098;gene_id=HG00140_ch_G0000353;Parent=HG00140_ch_G0000353;transcript_name=HG00140_ch_T0001098;gene_name=ANOS2P;ID=HG00140_ch_T0001098;Name=ANOS2P
HG00140_chrY	CAT	exon	14941530	14941879	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG00140_ch_T0001098;gene_id=HG00140_ch_G0000353;Parent=HG00140_ch_T0001098;transcript_name=HG00140_ch_T0001098;gene_name=ANOS2P;ID=exon:HG00140_ch_T0001098:0;Name=ANOS2P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14941880	14980787	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG00140_ch_T0001098;gene_id=HG00140_ch_G0000353;Parent=HG00140_ch_T0001098;transcript_name=HG00140_ch_T0001098;gene_name=ANOS2P;ID=intron:HG00140_ch_T0001098:0;Name=ANOS2P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	14980788	14980835	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG00140_ch_T0001098;gene_id=HG00140_ch_G0000353;Parent=HG00140_ch_T0001098;transcript_name=HG00140_ch_T0001098;gene_name=ANOS2P;ID=exon:HG00140_ch_T0001098:1;Name=ANOS2P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	14980836	15048394	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG00140_ch_T0001098;gene_id=HG00140_ch_G0000353;Parent=HG00140_ch_T0001098;transcript_name=HG00140_ch_T0001098;gene_name=ANOS2P;ID=intron:HG00140_ch_T0001098:1;Name=ANOS2P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15048395	15048617	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG00140_ch_T0001098;gene_id=HG00140_ch_G0000353;Parent=HG00140_ch_T0001098;transcript_name=HG00140_ch_T0001098;gene_name=ANOS2P;ID=exon:HG00140_ch_T0001098:2;Name=ANOS2P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15048618	15058959	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG00140_ch_T0001098;gene_id=HG00140_ch_G0000353;Parent=HG00140_ch_T0001098;transcript_name=HG00140_ch_T0001098;gene_name=ANOS2P;ID=intron:HG00140_ch_T0001098:2;Name=ANOS2P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15058960	15059143	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG00140_ch_T0001098;gene_id=HG00140_ch_G0000353;Parent=HG00140_ch_T0001098;transcript_name=HG00140_ch_T0001098;gene_name=ANOS2P;ID=exon:HG00140_ch_T0001098:3;Name=ANOS2P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15059144	15061574	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG00140_ch_T0001098;gene_id=HG00140_ch_G0000353;Parent=HG00140_ch_T0001098;transcript_name=HG00140_ch_T0001098;gene_name=ANOS2P;ID=intron:HG00140_ch_T0001098:3;Name=ANOS2P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15061575	15061691	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG00140_ch_T0001098;gene_id=HG00140_ch_G0000353;Parent=HG00140_ch_T0001098;transcript_name=HG00140_ch_T0001098;gene_name=ANOS2P;ID=exon:HG00140_ch_T0001098:4;Name=ANOS2P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15061692	15077153	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG00140_ch_T0001098;gene_id=HG00140_ch_G0000353;Parent=HG00140_ch_T0001098;transcript_name=HG00140_ch_T0001098;gene_name=ANOS2P;ID=intron:HG00140_ch_T0001098:4;Name=ANOS2P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15077154	15077359	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG00140_ch_T0001098;gene_id=HG00140_ch_G0000353;Parent=HG00140_ch_T0001098;transcript_name=HG00140_ch_T0001098;gene_name=ANOS2P;ID=exon:HG00140_ch_T0001098:5;Name=ANOS2P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15077360	15092769	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG00140_ch_T0001098;gene_id=HG00140_ch_G0000353;Parent=HG00140_ch_T0001098;transcript_name=HG00140_ch_T0001098;gene_name=ANOS2P;ID=intron:HG00140_ch_T0001098:5;Name=ANOS2P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15092770	15092864	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG00140_ch_T0001098;gene_id=HG00140_ch_G0000353;Parent=HG00140_ch_T0001098;transcript_name=HG00140_ch_T0001098;gene_name=ANOS2P;ID=exon:HG00140_ch_T0001098:6;Name=ANOS2P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15092865	15095582	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG00140_ch_T0001098;gene_id=HG00140_ch_G0000353;Parent=HG00140_ch_T0001098;transcript_name=HG00140_ch_T0001098;gene_name=ANOS2P;ID=intron:HG00140_ch_T0001098:6;Name=ANOS2P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15095583	15095753	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG00140_ch_T0001098;gene_id=HG00140_ch_G0000353;Parent=HG00140_ch_T0001098;transcript_name=HG00140_ch_T0001098;gene_name=ANOS2P;ID=exon:HG00140_ch_T0001098:7;Name=ANOS2P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15095754	15096727	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG00140_ch_T0001098;gene_id=HG00140_ch_G0000353;Parent=HG00140_ch_T0001098;transcript_name=HG00140_ch_T0001098;gene_name=ANOS2P;ID=intron:HG00140_ch_T0001098:7;Name=ANOS2P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15096728	15096948	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG00140_ch_T0001098;gene_id=HG00140_ch_G0000353;Parent=HG00140_ch_T0001098;transcript_name=HG00140_ch_T0001098;gene_name=ANOS2P;ID=exon:HG00140_ch_T0001098:8;Name=ANOS2P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15096949	15098073	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG00140_ch_T0001098;gene_id=HG00140_ch_G0000353;Parent=HG00140_ch_T0001098;transcript_name=HG00140_ch_T0001098;gene_name=ANOS2P;ID=intron:HG00140_ch_T0001098:8;Name=ANOS2P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15098074	15098215	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG00140_ch_T0001098;gene_id=HG00140_ch_G0000353;Parent=HG00140_ch_T0001098;transcript_name=HG00140_ch_T0001098;gene_name=ANOS2P;ID=exon:HG00140_ch_T0001098:9;Name=ANOS2P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15098216	15105668	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG00140_ch_T0001098;gene_id=HG00140_ch_G0000353;Parent=HG00140_ch_T0001098;transcript_name=HG00140_ch_T0001098;gene_name=ANOS2P;ID=intron:HG00140_ch_T0001098:9;Name=ANOS2P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15105669	15105727	.	+	.	source_transcript=ENST00000472227.5;source_transcript_name=ANOS2P-201;source_gene=ENSG00000241859.8;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000241859.8;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000472227.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000472227.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANOS2P;transcript_id=HG00140_ch_T0001098;gene_id=HG00140_ch_G0000353;Parent=HG00140_ch_T0001098;transcript_name=HG00140_ch_T0001098;gene_name=ANOS2P;ID=exon:HG00140_ch_T0001098:10;Name=ANOS2P;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	15175673	15176374	.	-	.	source_gene_common_name=VCY;source_gene=ENSG00000129864.7;alternative_source_transcripts=ENST00000250825.5,ENST00000250825.5;gene_id=HG00140_ch_G0000354;gene_biotype=protein_coding;gene_name=VCY;gene_sources=liftoff;ID=HG00140_ch_G0000354;Name=VCY
HG00140_chrY	CAT	transcript	15175673	15176374	100	-	.	source_transcript=ENST00000250825.5;source_transcript_name=VCY-201;source_gene=ENSG00000129864.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129864.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250825.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250825.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=ENST00000250825.5,ENST00000250825.5;transcript_id=HG00140_ch_T0001102;gene_id=HG00140_ch_G0000354;Parent=HG00140_ch_G0000354;transcript_name=HG00140_ch_T0001102;gene_name=VCY;ID=HG00140_ch_T0001102;Name=VCY
HG00140_chrY	CAT	exon	15175673	15176047	.	-	.	source_transcript=ENST00000250825.5;source_transcript_name=VCY-201;source_gene=ENSG00000129864.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129864.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250825.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250825.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=ENST00000250825.5,ENST00000250825.5;transcript_id=HG00140_ch_T0001102;gene_id=HG00140_ch_G0000354;Parent=HG00140_ch_T0001102;transcript_name=HG00140_ch_T0001102;gene_name=VCY;ID=exon:HG00140_ch_T0001102:0;Name=VCY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	15175772	15176047	.	-	0	source_transcript=ENST00000250825.5;source_transcript_name=VCY-201;source_gene=ENSG00000129864.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129864.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250825.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250825.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=ENST00000250825.5,ENST00000250825.5;transcript_id=HG00140_ch_T0001102;gene_id=HG00140_ch_G0000354;Parent=HG00140_ch_T0001102;transcript_name=HG00140_ch_T0001102;gene_name=VCY;ID=CDS:HG00140_ch_T0001102:0;Name=VCY;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	15175772	15175774	.	-	0	source_transcript=ENST00000250825.5;source_transcript_name=VCY-201;source_gene=ENSG00000129864.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129864.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250825.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250825.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=ENST00000250825.5,ENST00000250825.5;transcript_id=HG00140_ch_T0001102;gene_id=HG00140_ch_G0000354;Parent=HG00140_ch_T0001102;transcript_name=HG00140_ch_T0001102;gene_name=VCY;ID=stop_codon:HG00140_ch_T0001102;Name=VCY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15176048	15176239	.	-	.	source_transcript=ENST00000250825.5;source_transcript_name=VCY-201;source_gene=ENSG00000129864.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129864.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250825.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250825.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=ENST00000250825.5,ENST00000250825.5;transcript_id=HG00140_ch_T0001102;gene_id=HG00140_ch_G0000354;Parent=HG00140_ch_T0001102;transcript_name=HG00140_ch_T0001102;gene_name=VCY;ID=intron:HG00140_ch_T0001102:0;Name=VCY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15176240	15176374	.	-	.	source_transcript=ENST00000250825.5;source_transcript_name=VCY-201;source_gene=ENSG00000129864.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129864.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250825.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250825.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=ENST00000250825.5,ENST00000250825.5;transcript_id=HG00140_ch_T0001102;gene_id=HG00140_ch_G0000354;Parent=HG00140_ch_T0001102;transcript_name=HG00140_ch_T0001102;gene_name=VCY;ID=exon:HG00140_ch_T0001102:1;Name=VCY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	15176240	15176341	.	-	0	source_transcript=ENST00000250825.5;source_transcript_name=VCY-201;source_gene=ENSG00000129864.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129864.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250825.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250825.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=ENST00000250825.5,ENST00000250825.5;transcript_id=HG00140_ch_T0001102;gene_id=HG00140_ch_G0000354;Parent=HG00140_ch_T0001102;transcript_name=HG00140_ch_T0001102;gene_name=VCY;ID=CDS:HG00140_ch_T0001102:1;Name=VCY;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	15176339	15176341	.	-	0	source_transcript=ENST00000250825.5;source_transcript_name=VCY-201;source_gene=ENSG00000129864.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129864.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250825.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250825.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=ENST00000250825.5,ENST00000250825.5;transcript_id=HG00140_ch_T0001102;gene_id=HG00140_ch_G0000354;Parent=HG00140_ch_T0001102;transcript_name=HG00140_ch_T0001102;gene_name=VCY;ID=start_codon:HG00140_ch_T0001102;Name=VCY;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	15246164	15246895	.	+	.	source_gene_common_name=VCY1B;source_gene=ENSG00000129862.7;alternative_source_transcripts=ENST00000250823.5,ENST00000250823.5;gene_id=HG00140_ch_G0000355;gene_biotype=protein_coding;gene_name=VCY1B;gene_sources=liftoff;ID=HG00140_ch_G0000355;Name=VCY1B
HG00140_chrY	CAT	transcript	15246164	15246895	100	+	.	source_transcript=ENST00000250823.5;source_transcript_name=VCY1B-201;source_gene=ENSG00000129862.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129862.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250823.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250823.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=ENST00000250823.5,ENST00000250823.5;transcript_id=HG00140_ch_T0001103;gene_id=HG00140_ch_G0000355;Parent=HG00140_ch_G0000355;transcript_name=HG00140_ch_T0001103;gene_name=VCY1B;ID=HG00140_ch_T0001103;Name=VCY1B
HG00140_chrY	CAT	exon	15246164	15246328	.	+	.	source_transcript=ENST00000250823.5;source_transcript_name=VCY1B-201;source_gene=ENSG00000129862.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129862.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250823.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250823.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=ENST00000250823.5,ENST00000250823.5;transcript_id=HG00140_ch_T0001103;gene_id=HG00140_ch_G0000355;Parent=HG00140_ch_T0001103;transcript_name=HG00140_ch_T0001103;gene_name=VCY1B;ID=exon:HG00140_ch_T0001103:0;Name=VCY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	15246227	15246328	.	+	0	source_transcript=ENST00000250823.5;source_transcript_name=VCY1B-201;source_gene=ENSG00000129862.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129862.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250823.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250823.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=ENST00000250823.5,ENST00000250823.5;transcript_id=HG00140_ch_T0001103;gene_id=HG00140_ch_G0000355;Parent=HG00140_ch_T0001103;transcript_name=HG00140_ch_T0001103;gene_name=VCY1B;ID=CDS:HG00140_ch_T0001103:0;Name=VCY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	15246227	15246229	.	+	0	source_transcript=ENST00000250823.5;source_transcript_name=VCY1B-201;source_gene=ENSG00000129862.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129862.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250823.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250823.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=ENST00000250823.5,ENST00000250823.5;transcript_id=HG00140_ch_T0001103;gene_id=HG00140_ch_G0000355;Parent=HG00140_ch_T0001103;transcript_name=HG00140_ch_T0001103;gene_name=VCY1B;ID=start_codon:HG00140_ch_T0001103;Name=VCY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15246329	15246520	.	+	.	source_transcript=ENST00000250823.5;source_transcript_name=VCY1B-201;source_gene=ENSG00000129862.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129862.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250823.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250823.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=ENST00000250823.5,ENST00000250823.5;transcript_id=HG00140_ch_T0001103;gene_id=HG00140_ch_G0000355;Parent=HG00140_ch_T0001103;transcript_name=HG00140_ch_T0001103;gene_name=VCY1B;ID=intron:HG00140_ch_T0001103:0;Name=VCY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15246521	15246895	.	+	.	source_transcript=ENST00000250823.5;source_transcript_name=VCY1B-201;source_gene=ENSG00000129862.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129862.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250823.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250823.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=ENST00000250823.5,ENST00000250823.5;transcript_id=HG00140_ch_T0001103;gene_id=HG00140_ch_G0000355;Parent=HG00140_ch_T0001103;transcript_name=HG00140_ch_T0001103;gene_name=VCY1B;ID=exon:HG00140_ch_T0001103:1;Name=VCY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	15246521	15246796	.	+	0	source_transcript=ENST00000250823.5;source_transcript_name=VCY1B-201;source_gene=ENSG00000129862.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129862.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250823.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250823.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=ENST00000250823.5,ENST00000250823.5;transcript_id=HG00140_ch_T0001103;gene_id=HG00140_ch_G0000355;Parent=HG00140_ch_T0001103;transcript_name=HG00140_ch_T0001103;gene_name=VCY1B;ID=CDS:HG00140_ch_T0001103:1;Name=VCY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	15246794	15246796	.	+	0	source_transcript=ENST00000250823.5;source_transcript_name=VCY1B-201;source_gene=ENSG00000129862.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129862.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250823.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000250823.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=ENST00000250823.5,ENST00000250823.5;transcript_id=HG00140_ch_T0001103;gene_id=HG00140_ch_G0000355;Parent=HG00140_ch_T0001103;transcript_name=HG00140_ch_T0001103;gene_name=VCY1B;ID=stop_codon:HG00140_ch_T0001103;Name=VCY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	15271012	15276537	.	+	.	source_gene_common_name=PNPLA4P1;source_gene=ENSG00000235451.1;alternative_source_transcripts=ENST00000458328.1,ENST00000458328.1;gene_id=HG00140_ch_G0000356;gene_biotype=unprocessed_pseudogene;gene_name=PNPLA4P1;gene_sources=liftoff;ID=HG00140_ch_G0000356;Name=PNPLA4P1
HG00140_chrY	CAT	transcript	15271012	15276537	1000	+	.	source_transcript=ENST00000458328.1;source_transcript_name=PNPLA4P1-201;source_gene=ENSG00000235451.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235451.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000458328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458328.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PNPLA4P1;alternative_source_transcripts=ENST00000458328.1,ENST00000458328.1;transcript_id=HG00140_ch_T0001104;gene_id=HG00140_ch_G0000356;Parent=HG00140_ch_G0000356;transcript_name=HG00140_ch_T0001104;gene_name=PNPLA4P1;ID=HG00140_ch_T0001104;Name=PNPLA4P1
HG00140_chrY	CAT	exon	15271012	15271106	.	+	.	source_transcript=ENST00000458328.1;source_transcript_name=PNPLA4P1-201;source_gene=ENSG00000235451.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235451.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000458328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458328.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PNPLA4P1;alternative_source_transcripts=ENST00000458328.1,ENST00000458328.1;transcript_id=HG00140_ch_T0001104;gene_id=HG00140_ch_G0000356;Parent=HG00140_ch_T0001104;transcript_name=HG00140_ch_T0001104;gene_name=PNPLA4P1;ID=exon:HG00140_ch_T0001104:0;Name=PNPLA4P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15271107	15271242	.	+	.	source_transcript=ENST00000458328.1;source_transcript_name=PNPLA4P1-201;source_gene=ENSG00000235451.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235451.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000458328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458328.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PNPLA4P1;alternative_source_transcripts=ENST00000458328.1,ENST00000458328.1;transcript_id=HG00140_ch_T0001104;gene_id=HG00140_ch_G0000356;Parent=HG00140_ch_T0001104;transcript_name=HG00140_ch_T0001104;gene_name=PNPLA4P1;ID=intron:HG00140_ch_T0001104:0;Name=PNPLA4P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15271243	15271386	.	+	.	source_transcript=ENST00000458328.1;source_transcript_name=PNPLA4P1-201;source_gene=ENSG00000235451.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235451.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000458328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458328.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PNPLA4P1;alternative_source_transcripts=ENST00000458328.1,ENST00000458328.1;transcript_id=HG00140_ch_T0001104;gene_id=HG00140_ch_G0000356;Parent=HG00140_ch_T0001104;transcript_name=HG00140_ch_T0001104;gene_name=PNPLA4P1;ID=exon:HG00140_ch_T0001104:1;Name=PNPLA4P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15271387	15276471	.	+	.	source_transcript=ENST00000458328.1;source_transcript_name=PNPLA4P1-201;source_gene=ENSG00000235451.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235451.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000458328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458328.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PNPLA4P1;alternative_source_transcripts=ENST00000458328.1,ENST00000458328.1;transcript_id=HG00140_ch_T0001104;gene_id=HG00140_ch_G0000356;Parent=HG00140_ch_T0001104;transcript_name=HG00140_ch_T0001104;gene_name=PNPLA4P1;ID=intron:HG00140_ch_T0001104:1;Name=PNPLA4P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15276472	15276537	.	+	.	source_transcript=ENST00000458328.1;source_transcript_name=PNPLA4P1-201;source_gene=ENSG00000235451.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235451.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000458328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458328.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PNPLA4P1;alternative_source_transcripts=ENST00000458328.1,ENST00000458328.1;transcript_id=HG00140_ch_T0001104;gene_id=HG00140_ch_G0000356;Parent=HG00140_ch_T0001104;transcript_name=HG00140_ch_T0001104;gene_name=PNPLA4P1;ID=exon:HG00140_ch_T0001104:2;Name=PNPLA4P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	15291525	15291660	.	-	.	source_gene_common_name=ENSG00000289706;source_gene=ENSG00000289706.1;alternative_source_transcripts=ENST00000696463.1,ENST00000696463.1;gene_id=HG00140_ch_G0000357;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000289706;gene_sources=liftoff;ID=HG00140_ch_G0000357;Name=ENSG00000289706
HG00140_chrY	CAT	transcript	15291525	15291660	1000	-	.	source_transcript=ENST00000696463.1;source_transcript_name=ENST00000696463;source_gene=ENSG00000289706.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000289706.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000696463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696463.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289706;alternative_source_transcripts=ENST00000696463.1,ENST00000696463.1;transcript_id=HG00140_ch_T0001105;gene_id=HG00140_ch_G0000357;Parent=HG00140_ch_G0000357;transcript_name=HG00140_ch_T0001105;gene_name=ENSG00000289706;ID=HG00140_ch_T0001105;Name=ENSG00000289706
HG00140_chrY	CAT	exon	15291525	15291660	.	-	.	source_transcript=ENST00000696463.1;source_transcript_name=ENST00000696463;source_gene=ENSG00000289706.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000289706.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000696463.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289706;alternative_source_transcripts=ENST00000696463.1,ENST00000696463.1;transcript_id=HG00140_ch_T0001105;gene_id=HG00140_ch_G0000357;Parent=HG00140_ch_T0001105;transcript_name=HG00140_ch_T0001105;gene_name=ENSG00000289706;ID=exon:HG00140_ch_T0001105:0;Name=ENSG00000289706;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	15466149	15467426	.	-	.	source_gene_common_name=ENSG00000223517;source_gene=ENSG00000223517.1;alternative_source_transcripts=ENST00000435111.1,ENST00000435111.1;gene_id=HG00140_ch_G0000358;gene_biotype=lncRNA;gene_name=ENSG00000223517;gene_sources=liftoff;ID=HG00140_ch_G0000358;Name=ENSG00000223517
HG00140_chrY	CAT	transcript	15466149	15467426	1000	-	.	source_transcript=ENST00000435111.1;source_transcript_name=ENST00000435111;source_gene=ENSG00000223517.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223517.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000435111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435111.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223517;alternative_source_transcripts=ENST00000435111.1,ENST00000435111.1;transcript_id=HG00140_ch_T0001106;gene_id=HG00140_ch_G0000358;Parent=HG00140_ch_G0000358;transcript_name=HG00140_ch_T0001106;gene_name=ENSG00000223517;ID=HG00140_ch_T0001106;Name=ENSG00000223517
HG00140_chrY	CAT	exon	15466149	15466548	.	-	.	source_transcript=ENST00000435111.1;source_transcript_name=ENST00000435111;source_gene=ENSG00000223517.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223517.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000435111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223517;alternative_source_transcripts=ENST00000435111.1,ENST00000435111.1;transcript_id=HG00140_ch_T0001106;gene_id=HG00140_ch_G0000358;Parent=HG00140_ch_T0001106;transcript_name=HG00140_ch_T0001106;gene_name=ENSG00000223517;ID=exon:HG00140_ch_T0001106:0;Name=ENSG00000223517;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15466549	15467286	.	-	.	source_transcript=ENST00000435111.1;source_transcript_name=ENST00000435111;source_gene=ENSG00000223517.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223517.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000435111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223517;alternative_source_transcripts=ENST00000435111.1,ENST00000435111.1;transcript_id=HG00140_ch_T0001106;gene_id=HG00140_ch_G0000358;Parent=HG00140_ch_T0001106;transcript_name=HG00140_ch_T0001106;gene_name=ENSG00000223517;ID=intron:HG00140_ch_T0001106:0;Name=ENSG00000223517;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15467287	15467426	.	-	.	source_transcript=ENST00000435111.1;source_transcript_name=ENST00000435111;source_gene=ENSG00000223517.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223517.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000435111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000223517;alternative_source_transcripts=ENST00000435111.1,ENST00000435111.1;transcript_id=HG00140_ch_T0001106;gene_id=HG00140_ch_G0000358;Parent=HG00140_ch_T0001106;transcript_name=HG00140_ch_T0001106;gene_name=ENSG00000223517;ID=exon:HG00140_ch_T0001106:1;Name=ENSG00000223517;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	15712495	16035574	.	+	.	source_gene_common_name=NLGN4Y;source_gene=ENSG00000165246.15;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;gene_id=HG00140_ch_G0000359;gene_biotype=protein_coding;gene_name=NLGN4Y;gene_sources=liftoff;ID=HG00140_ch_G0000359;Name=NLGN4Y
HG00140_chrY	CAT	transcript	15712495	16035559	100	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG00140_ch_T0001107;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_G0000359;transcript_name=HG00140_ch_T0001107;gene_name=NLGN4Y;ID=HG00140_ch_T0001107;Name=NLGN4Y
HG00140_chrY	CAT	exon	15712495	15712863	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG00140_ch_T0001107;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001107;transcript_name=HG00140_ch_T0001107;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001107:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15712864	15811950	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG00140_ch_T0001107;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001107;transcript_name=HG00140_ch_T0001107;gene_name=NLGN4Y;ID=intron:HG00140_ch_T0001107:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15811951	15812533	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG00140_ch_T0001107;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001107;transcript_name=HG00140_ch_T0001107;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001107:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	15812062	15812533	.	+	0	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG00140_ch_T0001107;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001107;transcript_name=HG00140_ch_T0001107;gene_name=NLGN4Y;ID=CDS:HG00140_ch_T0001107:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	15812062	15812064	.	+	0	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG00140_ch_T0001107;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001107;transcript_name=HG00140_ch_T0001107;gene_name=NLGN4Y;ID=start_codon:HG00140_ch_T0001107;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15812534	15909413	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG00140_ch_T0001107;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001107;transcript_name=HG00140_ch_T0001107;gene_name=NLGN4Y;ID=intron:HG00140_ch_T0001107:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15909414	15909473	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG00140_ch_T0001107;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001107;transcript_name=HG00140_ch_T0001107;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001107:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	15909414	15909473	.	+	2	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG00140_ch_T0001107;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001107;transcript_name=HG00140_ch_T0001107;gene_name=NLGN4Y;ID=CDS:HG00140_ch_T0001107:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15909474	15913080	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG00140_ch_T0001107;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001107;transcript_name=HG00140_ch_T0001107;gene_name=NLGN4Y;ID=intron:HG00140_ch_T0001107:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15913081	15913233	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG00140_ch_T0001107;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001107;transcript_name=HG00140_ch_T0001107;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001107:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	15913081	15913233	.	+	2	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG00140_ch_T0001107;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001107;transcript_name=HG00140_ch_T0001107;gene_name=NLGN4Y;ID=CDS:HG00140_ch_T0001107:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15913234	16014107	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG00140_ch_T0001107;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001107;transcript_name=HG00140_ch_T0001107;gene_name=NLGN4Y;ID=intron:HG00140_ch_T0001107:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	16014108	16014293	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG00140_ch_T0001107;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001107;transcript_name=HG00140_ch_T0001107;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001107:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	16014108	16014293	.	+	2	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG00140_ch_T0001107;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001107;transcript_name=HG00140_ch_T0001107;gene_name=NLGN4Y;ID=CDS:HG00140_ch_T0001107:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	16014294	16019649	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG00140_ch_T0001107;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001107;transcript_name=HG00140_ch_T0001107;gene_name=NLGN4Y;ID=intron:HG00140_ch_T0001107:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	16019650	16020439	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG00140_ch_T0001107;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001107;transcript_name=HG00140_ch_T0001107;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001107:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	16019650	16020439	.	+	2	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG00140_ch_T0001107;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001107;transcript_name=HG00140_ch_T0001107;gene_name=NLGN4Y;ID=CDS:HG00140_ch_T0001107:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	16020440	16030332	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG00140_ch_T0001107;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001107;transcript_name=HG00140_ch_T0001107;gene_name=NLGN4Y;ID=intron:HG00140_ch_T0001107:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	16030333	16035559	.	+	.	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG00140_ch_T0001107;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001107;transcript_name=HG00140_ch_T0001107;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001107:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	16030333	16031182	.	+	1	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG00140_ch_T0001107;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001107;transcript_name=HG00140_ch_T0001107;gene_name=NLGN4Y;ID=CDS:HG00140_ch_T0001107:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	16031180	16031182	.	+	0	source_transcript=ENST00000643089.1;source_transcript_name=NLGN4Y-209;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000643089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000643089.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000643089.1,ENST00000643089.1;transcript_id=HG00140_ch_T0001107;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001107;transcript_name=HG00140_ch_T0001107;gene_name=NLGN4Y;ID=stop_codon:HG00140_ch_T0001107;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	15712560	15812439	1000	+	.	source_transcript=ENST00000471252.1;source_transcript_name=NLGN4Y-206;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000471252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000471252.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000471252.1,ENST00000471252.1;transcript_id=HG00140_ch_T0001108;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_G0000359;transcript_name=HG00140_ch_T0001108;gene_name=NLGN4Y;ID=HG00140_ch_T0001108;Name=NLGN4Y
HG00140_chrY	CAT	exon	15712560	15712863	.	+	.	source_transcript=ENST00000471252.1;source_transcript_name=NLGN4Y-206;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000471252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000471252.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000471252.1,ENST00000471252.1;transcript_id=HG00140_ch_T0001108;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001108;transcript_name=HG00140_ch_T0001108;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001108:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15712864	15811950	.	+	.	source_transcript=ENST00000471252.1;source_transcript_name=NLGN4Y-206;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000471252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000471252.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000471252.1,ENST00000471252.1;transcript_id=HG00140_ch_T0001108;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001108;transcript_name=HG00140_ch_T0001108;gene_name=NLGN4Y;ID=intron:HG00140_ch_T0001108:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15811951	15812439	.	+	.	source_transcript=ENST00000471252.1;source_transcript_name=NLGN4Y-206;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000471252.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000471252.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000471252.1,ENST00000471252.1;transcript_id=HG00140_ch_T0001108;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001108;transcript_name=HG00140_ch_T0001108;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001108:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	15712674	16035570	100	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG00140_ch_T0001109;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_G0000359;transcript_name=HG00140_ch_T0001109;gene_name=NLGN4Y;ID=HG00140_ch_T0001109;Name=NLGN4Y
HG00140_chrY	CAT	exon	15712674	15712863	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG00140_ch_T0001109;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001109;transcript_name=HG00140_ch_T0001109;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001109:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15712864	15909413	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG00140_ch_T0001109;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001109;transcript_name=HG00140_ch_T0001109;gene_name=NLGN4Y;ID=intron:HG00140_ch_T0001109:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15909414	15909473	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG00140_ch_T0001109;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001109;transcript_name=HG00140_ch_T0001109;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001109:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15909474	15913080	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG00140_ch_T0001109;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001109;transcript_name=HG00140_ch_T0001109;gene_name=NLGN4Y;ID=intron:HG00140_ch_T0001109:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15913081	15913233	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG00140_ch_T0001109;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001109;transcript_name=HG00140_ch_T0001109;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001109:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	15913113	15913233	.	+	0	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG00140_ch_T0001109;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001109;transcript_name=HG00140_ch_T0001109;gene_name=NLGN4Y;ID=CDS:HG00140_ch_T0001109:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	15913113	15913115	.	+	0	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG00140_ch_T0001109;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001109;transcript_name=HG00140_ch_T0001109;gene_name=NLGN4Y;ID=start_codon:HG00140_ch_T0001109;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15913234	16014107	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG00140_ch_T0001109;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001109;transcript_name=HG00140_ch_T0001109;gene_name=NLGN4Y;ID=intron:HG00140_ch_T0001109:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	16014108	16014293	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG00140_ch_T0001109;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001109;transcript_name=HG00140_ch_T0001109;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001109:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	16014108	16014293	.	+	2	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG00140_ch_T0001109;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001109;transcript_name=HG00140_ch_T0001109;gene_name=NLGN4Y;ID=CDS:HG00140_ch_T0001109:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	16014294	16019649	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG00140_ch_T0001109;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001109;transcript_name=HG00140_ch_T0001109;gene_name=NLGN4Y;ID=intron:HG00140_ch_T0001109:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	16019650	16020439	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG00140_ch_T0001109;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001109;transcript_name=HG00140_ch_T0001109;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001109:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	16019650	16020439	.	+	2	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG00140_ch_T0001109;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001109;transcript_name=HG00140_ch_T0001109;gene_name=NLGN4Y;ID=CDS:HG00140_ch_T0001109:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	16020440	16030332	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG00140_ch_T0001109;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001109;transcript_name=HG00140_ch_T0001109;gene_name=NLGN4Y;ID=intron:HG00140_ch_T0001109:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	16030333	16035570	.	+	.	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG00140_ch_T0001109;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001109;transcript_name=HG00140_ch_T0001109;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001109:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	16030333	16031182	.	+	1	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG00140_ch_T0001109;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001109;transcript_name=HG00140_ch_T0001109;gene_name=NLGN4Y;ID=CDS:HG00140_ch_T0001109:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	16031180	16031182	.	+	0	source_transcript=ENST00000382872.5;source_transcript_name=NLGN4Y-204;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382872.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382872.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382872.5,ENST00000382872.5;transcript_id=HG00140_ch_T0001109;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001109;transcript_name=HG00140_ch_T0001109;gene_name=NLGN4Y;ID=stop_codon:HG00140_ch_T0001109;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	15713668	16033646	100	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG00140_ch_T0001110;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_G0000359;transcript_name=HG00140_ch_T0001110;gene_name=NLGN4Y;ID=HG00140_ch_T0001110;Name=NLGN4Y
HG00140_chrY	CAT	exon	15713668	15713820	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG00140_ch_T0001110;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001110;transcript_name=HG00140_ch_T0001110;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001110:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15713821	15811962	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG00140_ch_T0001110;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001110;transcript_name=HG00140_ch_T0001110;gene_name=NLGN4Y;ID=intron:HG00140_ch_T0001110:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15811963	15812533	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG00140_ch_T0001110;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001110;transcript_name=HG00140_ch_T0001110;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001110:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	15812062	15812533	.	+	0	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG00140_ch_T0001110;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001110;transcript_name=HG00140_ch_T0001110;gene_name=NLGN4Y;ID=CDS:HG00140_ch_T0001110:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	15812062	15812064	.	+	0	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG00140_ch_T0001110;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001110;transcript_name=HG00140_ch_T0001110;gene_name=NLGN4Y;ID=start_codon:HG00140_ch_T0001110;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15812534	15913080	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG00140_ch_T0001110;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001110;transcript_name=HG00140_ch_T0001110;gene_name=NLGN4Y;ID=intron:HG00140_ch_T0001110:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15913081	15913233	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG00140_ch_T0001110;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001110;transcript_name=HG00140_ch_T0001110;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001110:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	15913081	15913233	.	+	2	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG00140_ch_T0001110;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001110;transcript_name=HG00140_ch_T0001110;gene_name=NLGN4Y;ID=CDS:HG00140_ch_T0001110:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15913234	16014107	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG00140_ch_T0001110;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001110;transcript_name=HG00140_ch_T0001110;gene_name=NLGN4Y;ID=intron:HG00140_ch_T0001110:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	16014108	16014293	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG00140_ch_T0001110;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001110;transcript_name=HG00140_ch_T0001110;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001110:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	16014108	16014293	.	+	2	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG00140_ch_T0001110;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001110;transcript_name=HG00140_ch_T0001110;gene_name=NLGN4Y;ID=CDS:HG00140_ch_T0001110:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	16014294	16019649	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG00140_ch_T0001110;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001110;transcript_name=HG00140_ch_T0001110;gene_name=NLGN4Y;ID=intron:HG00140_ch_T0001110:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	16019650	16020439	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG00140_ch_T0001110;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001110;transcript_name=HG00140_ch_T0001110;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001110:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	16019650	16020439	.	+	2	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG00140_ch_T0001110;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001110;transcript_name=HG00140_ch_T0001110;gene_name=NLGN4Y;ID=CDS:HG00140_ch_T0001110:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	16020440	16030332	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG00140_ch_T0001110;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001110;transcript_name=HG00140_ch_T0001110;gene_name=NLGN4Y;ID=intron:HG00140_ch_T0001110:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	16030333	16033646	.	+	.	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG00140_ch_T0001110;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001110;transcript_name=HG00140_ch_T0001110;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001110:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	16030333	16031182	.	+	1	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG00140_ch_T0001110;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001110;transcript_name=HG00140_ch_T0001110;gene_name=NLGN4Y;ID=CDS:HG00140_ch_T0001110:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	16031180	16031182	.	+	0	source_transcript=ENST00000355905.6;source_transcript_name=NLGN4Y-202;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000355905.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000355905.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000355905.6,ENST00000355905.6;transcript_id=HG00140_ch_T0001110;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001110;transcript_name=HG00140_ch_T0001110;gene_name=NLGN4Y;ID=stop_codon:HG00140_ch_T0001110;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	15713668	16033646	100	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG00140_ch_T0001111;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_G0000359;transcript_name=HG00140_ch_T0001111;gene_name=NLGN4Y;ID=HG00140_ch_T0001111;Name=NLGN4Y
HG00140_chrY	CAT	exon	15713668	15713820	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG00140_ch_T0001111;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001111;transcript_name=HG00140_ch_T0001111;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001111:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15713821	15811962	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG00140_ch_T0001111;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001111;transcript_name=HG00140_ch_T0001111;gene_name=NLGN4Y;ID=intron:HG00140_ch_T0001111:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15811963	15812533	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG00140_ch_T0001111;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001111;transcript_name=HG00140_ch_T0001111;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001111:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	15812062	15812533	.	+	0	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG00140_ch_T0001111;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001111;transcript_name=HG00140_ch_T0001111;gene_name=NLGN4Y;ID=CDS:HG00140_ch_T0001111:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	15812062	15812064	.	+	0	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG00140_ch_T0001111;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001111;transcript_name=HG00140_ch_T0001111;gene_name=NLGN4Y;ID=start_codon:HG00140_ch_T0001111;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15812534	15909413	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG00140_ch_T0001111;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001111;transcript_name=HG00140_ch_T0001111;gene_name=NLGN4Y;ID=intron:HG00140_ch_T0001111:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15909414	15909473	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG00140_ch_T0001111;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001111;transcript_name=HG00140_ch_T0001111;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001111:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	15909414	15909473	.	+	2	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG00140_ch_T0001111;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001111;transcript_name=HG00140_ch_T0001111;gene_name=NLGN4Y;ID=CDS:HG00140_ch_T0001111:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15909474	15913080	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG00140_ch_T0001111;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001111;transcript_name=HG00140_ch_T0001111;gene_name=NLGN4Y;ID=intron:HG00140_ch_T0001111:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15913081	15913233	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG00140_ch_T0001111;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001111;transcript_name=HG00140_ch_T0001111;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001111:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	15913081	15913233	.	+	2	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG00140_ch_T0001111;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001111;transcript_name=HG00140_ch_T0001111;gene_name=NLGN4Y;ID=CDS:HG00140_ch_T0001111:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15913234	15938588	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG00140_ch_T0001111;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001111;transcript_name=HG00140_ch_T0001111;gene_name=NLGN4Y;ID=intron:HG00140_ch_T0001111:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15938589	15938699	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG00140_ch_T0001111;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001111;transcript_name=HG00140_ch_T0001111;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001111:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	15938589	15938699	.	+	2	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG00140_ch_T0001111;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001111;transcript_name=HG00140_ch_T0001111;gene_name=NLGN4Y;ID=CDS:HG00140_ch_T0001111:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15938700	16014107	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG00140_ch_T0001111;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001111;transcript_name=HG00140_ch_T0001111;gene_name=NLGN4Y;ID=intron:HG00140_ch_T0001111:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	16014108	16014293	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG00140_ch_T0001111;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001111;transcript_name=HG00140_ch_T0001111;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001111:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	16014108	16014293	.	+	2	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG00140_ch_T0001111;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001111;transcript_name=HG00140_ch_T0001111;gene_name=NLGN4Y;ID=CDS:HG00140_ch_T0001111:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	16014294	16019649	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG00140_ch_T0001111;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001111;transcript_name=HG00140_ch_T0001111;gene_name=NLGN4Y;ID=intron:HG00140_ch_T0001111:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	16019650	16020439	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG00140_ch_T0001111;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001111;transcript_name=HG00140_ch_T0001111;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001111:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	16019650	16020439	.	+	2	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG00140_ch_T0001111;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001111;transcript_name=HG00140_ch_T0001111;gene_name=NLGN4Y;ID=CDS:HG00140_ch_T0001111:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	16020440	16030332	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG00140_ch_T0001111;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001111;transcript_name=HG00140_ch_T0001111;gene_name=NLGN4Y;ID=intron:HG00140_ch_T0001111:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	16030333	16033646	.	+	.	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG00140_ch_T0001111;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001111;transcript_name=HG00140_ch_T0001111;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001111:7;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	16030333	16031182	.	+	1	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG00140_ch_T0001111;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001111;transcript_name=HG00140_ch_T0001111;gene_name=NLGN4Y;ID=CDS:HG00140_ch_T0001111:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	16031180	16031182	.	+	0	source_transcript=ENST00000382868.5;source_transcript_name=NLGN4Y-203;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382868.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382868.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000382868.5,ENST00000382868.5;transcript_id=HG00140_ch_T0001111;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001111;transcript_name=HG00140_ch_T0001111;gene_name=NLGN4Y;ID=stop_codon:HG00140_ch_T0001111;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	15713668	16033646	1000	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG00140_ch_T0001112;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_G0000359;transcript_name=HG00140_ch_T0001112;gene_name=NLGN4Y;ID=HG00140_ch_T0001112;Name=NLGN4Y
HG00140_chrY	CAT	exon	15713668	15713820	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG00140_ch_T0001112;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001112;transcript_name=HG00140_ch_T0001112;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001112:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15713821	15811962	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG00140_ch_T0001112;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001112;transcript_name=HG00140_ch_T0001112;gene_name=NLGN4Y;ID=intron:HG00140_ch_T0001112:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15811963	15812533	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG00140_ch_T0001112;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001112;transcript_name=HG00140_ch_T0001112;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001112:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15812534	15909413	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG00140_ch_T0001112;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001112;transcript_name=HG00140_ch_T0001112;gene_name=NLGN4Y;ID=intron:HG00140_ch_T0001112:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15909414	15909473	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG00140_ch_T0001112;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001112;transcript_name=HG00140_ch_T0001112;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001112:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15909474	15913080	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG00140_ch_T0001112;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001112;transcript_name=HG00140_ch_T0001112;gene_name=NLGN4Y;ID=intron:HG00140_ch_T0001112:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15913081	15913233	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG00140_ch_T0001112;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001112;transcript_name=HG00140_ch_T0001112;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001112:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15913234	15938588	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG00140_ch_T0001112;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001112;transcript_name=HG00140_ch_T0001112;gene_name=NLGN4Y;ID=intron:HG00140_ch_T0001112:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15938589	15938699	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG00140_ch_T0001112;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001112;transcript_name=HG00140_ch_T0001112;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001112:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15938700	15941642	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG00140_ch_T0001112;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001112;transcript_name=HG00140_ch_T0001112;gene_name=NLGN4Y;ID=intron:HG00140_ch_T0001112:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15941643	15941764	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG00140_ch_T0001112;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001112;transcript_name=HG00140_ch_T0001112;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001112:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15941765	16014107	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG00140_ch_T0001112;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001112;transcript_name=HG00140_ch_T0001112;gene_name=NLGN4Y;ID=intron:HG00140_ch_T0001112:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	16014108	16014293	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG00140_ch_T0001112;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001112;transcript_name=HG00140_ch_T0001112;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001112:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	16014294	16019649	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG00140_ch_T0001112;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001112;transcript_name=HG00140_ch_T0001112;gene_name=NLGN4Y;ID=intron:HG00140_ch_T0001112:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	16019650	16020439	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG00140_ch_T0001112;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001112;transcript_name=HG00140_ch_T0001112;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001112:7;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	16020440	16030332	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG00140_ch_T0001112;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001112;transcript_name=HG00140_ch_T0001112;gene_name=NLGN4Y;ID=intron:HG00140_ch_T0001112:7;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	16030333	16033646	.	+	.	source_transcript=ENST00000476359.1;source_transcript_name=NLGN4Y-207;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000476359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000476359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000476359.1,ENST00000476359.1;transcript_id=HG00140_ch_T0001112;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001112;transcript_name=HG00140_ch_T0001112;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001112:8;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	15713889	15812162	100	+	.	source_transcript=ENST00000645399.1;source_transcript_name=NLGN4Y-210;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000645399.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000645399.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000645399.1,ENST00000645399.1;transcript_id=HG00140_ch_T0001113;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_G0000359;transcript_name=HG00140_ch_T0001113;gene_name=NLGN4Y;ID=HG00140_ch_T0001113;Name=NLGN4Y
HG00140_chrY	CAT	exon	15713889	15714206	.	+	.	source_transcript=ENST00000645399.1;source_transcript_name=NLGN4Y-210;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000645399.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000645399.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000645399.1,ENST00000645399.1;transcript_id=HG00140_ch_T0001113;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001113;transcript_name=HG00140_ch_T0001113;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001113:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15714207	15811950	.	+	.	source_transcript=ENST00000645399.1;source_transcript_name=NLGN4Y-210;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000645399.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000645399.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000645399.1,ENST00000645399.1;transcript_id=HG00140_ch_T0001113;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001113;transcript_name=HG00140_ch_T0001113;gene_name=NLGN4Y;ID=intron:HG00140_ch_T0001113:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15811951	15812162	.	+	.	source_transcript=ENST00000645399.1;source_transcript_name=NLGN4Y-210;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000645399.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000645399.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000645399.1,ENST00000645399.1;transcript_id=HG00140_ch_T0001113;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001113;transcript_name=HG00140_ch_T0001113;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001113:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	15812062	15812162	.	+	0	source_transcript=ENST00000645399.1;source_transcript_name=NLGN4Y-210;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000645399.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000645399.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000645399.1,ENST00000645399.1;transcript_id=HG00140_ch_T0001113;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001113;transcript_name=HG00140_ch_T0001113;gene_name=NLGN4Y;ID=CDS:HG00140_ch_T0001113:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	15812062	15812064	.	+	0	source_transcript=ENST00000645399.1;source_transcript_name=NLGN4Y-210;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000645399.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000645399.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000645399.1,ENST00000645399.1;transcript_id=HG00140_ch_T0001113;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001113;transcript_name=HG00140_ch_T0001113;gene_name=NLGN4Y;ID=start_codon:HG00140_ch_T0001113;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	15714451	16035574	100	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG00140_ch_T0001114;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_G0000359;transcript_name=HG00140_ch_T0001114;gene_name=NLGN4Y;ID=HG00140_ch_T0001114;Name=NLGN4Y
HG00140_chrY	CAT	exon	15714451	15714630	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG00140_ch_T0001114;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001114;transcript_name=HG00140_ch_T0001114;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001114:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15714631	15811950	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG00140_ch_T0001114;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001114;transcript_name=HG00140_ch_T0001114;gene_name=NLGN4Y;ID=intron:HG00140_ch_T0001114:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15811951	15812533	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG00140_ch_T0001114;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001114;transcript_name=HG00140_ch_T0001114;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001114:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	15812062	15812533	.	+	0	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG00140_ch_T0001114;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001114;transcript_name=HG00140_ch_T0001114;gene_name=NLGN4Y;ID=CDS:HG00140_ch_T0001114:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	15812062	15812064	.	+	0	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG00140_ch_T0001114;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001114;transcript_name=HG00140_ch_T0001114;gene_name=NLGN4Y;ID=start_codon:HG00140_ch_T0001114;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15812534	15909413	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG00140_ch_T0001114;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001114;transcript_name=HG00140_ch_T0001114;gene_name=NLGN4Y;ID=intron:HG00140_ch_T0001114:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15909414	15909473	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG00140_ch_T0001114;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001114;transcript_name=HG00140_ch_T0001114;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001114:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	15909414	15909473	.	+	2	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG00140_ch_T0001114;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001114;transcript_name=HG00140_ch_T0001114;gene_name=NLGN4Y;ID=CDS:HG00140_ch_T0001114:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15909474	15913080	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG00140_ch_T0001114;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001114;transcript_name=HG00140_ch_T0001114;gene_name=NLGN4Y;ID=intron:HG00140_ch_T0001114:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15913081	15913233	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG00140_ch_T0001114;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001114;transcript_name=HG00140_ch_T0001114;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001114:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	15913081	15913233	.	+	2	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG00140_ch_T0001114;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001114;transcript_name=HG00140_ch_T0001114;gene_name=NLGN4Y;ID=CDS:HG00140_ch_T0001114:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15913234	16014107	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG00140_ch_T0001114;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001114;transcript_name=HG00140_ch_T0001114;gene_name=NLGN4Y;ID=intron:HG00140_ch_T0001114:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	16014108	16014293	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG00140_ch_T0001114;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001114;transcript_name=HG00140_ch_T0001114;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001114:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	16014108	16014293	.	+	2	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG00140_ch_T0001114;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001114;transcript_name=HG00140_ch_T0001114;gene_name=NLGN4Y;ID=CDS:HG00140_ch_T0001114:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	16014294	16019649	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG00140_ch_T0001114;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001114;transcript_name=HG00140_ch_T0001114;gene_name=NLGN4Y;ID=intron:HG00140_ch_T0001114:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	16019650	16020439	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG00140_ch_T0001114;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001114;transcript_name=HG00140_ch_T0001114;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001114:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	16019650	16020439	.	+	2	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG00140_ch_T0001114;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001114;transcript_name=HG00140_ch_T0001114;gene_name=NLGN4Y;ID=CDS:HG00140_ch_T0001114:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	16020440	16030332	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG00140_ch_T0001114;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001114;transcript_name=HG00140_ch_T0001114;gene_name=NLGN4Y;ID=intron:HG00140_ch_T0001114:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	16030333	16035574	.	+	.	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG00140_ch_T0001114;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001114;transcript_name=HG00140_ch_T0001114;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001114:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	16030333	16031182	.	+	1	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG00140_ch_T0001114;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001114;transcript_name=HG00140_ch_T0001114;gene_name=NLGN4Y;ID=CDS:HG00140_ch_T0001114:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	16031180	16031182	.	+	0	source_transcript=ENST00000684976.1;source_transcript_name=NLGN4Y-211;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000684976.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000684976.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000684976.1,ENST00000684976.1;transcript_id=HG00140_ch_T0001114;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001114;transcript_name=HG00140_ch_T0001114;gene_name=NLGN4Y;ID=stop_codon:HG00140_ch_T0001114;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	15714451	15812310	1000	+	.	source_transcript=ENST00000481089.1;source_transcript_name=NLGN4Y-208;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481089.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000481089.1,ENST00000481089.1;transcript_id=HG00140_ch_T0001115;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_G0000359;transcript_name=HG00140_ch_T0001115;gene_name=NLGN4Y;ID=HG00140_ch_T0001115;Name=NLGN4Y
HG00140_chrY	CAT	exon	15714451	15714630	.	+	.	source_transcript=ENST00000481089.1;source_transcript_name=NLGN4Y-208;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481089.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000481089.1,ENST00000481089.1;transcript_id=HG00140_ch_T0001115;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001115;transcript_name=HG00140_ch_T0001115;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001115:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15714631	15811950	.	+	.	source_transcript=ENST00000481089.1;source_transcript_name=NLGN4Y-208;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481089.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000481089.1,ENST00000481089.1;transcript_id=HG00140_ch_T0001115;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001115;transcript_name=HG00140_ch_T0001115;gene_name=NLGN4Y;ID=intron:HG00140_ch_T0001115:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15811951	15812310	.	+	.	source_transcript=ENST00000481089.1;source_transcript_name=NLGN4Y-208;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481089.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481089.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000481089.1,ENST00000481089.1;transcript_id=HG00140_ch_T0001115;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001115;transcript_name=HG00140_ch_T0001115;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001115:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	15714496	16033567	100	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG00140_ch_T0001116;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_G0000359;transcript_name=HG00140_ch_T0001116;gene_name=NLGN4Y;ID=HG00140_ch_T0001116;Name=NLGN4Y
HG00140_chrY	CAT	exon	15714496	15714858	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG00140_ch_T0001116;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001116;transcript_name=HG00140_ch_T0001116;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001116:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15714859	15811950	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG00140_ch_T0001116;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001116;transcript_name=HG00140_ch_T0001116;gene_name=NLGN4Y;ID=intron:HG00140_ch_T0001116:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15811951	15812533	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG00140_ch_T0001116;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001116;transcript_name=HG00140_ch_T0001116;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001116:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	15812062	15812533	.	+	0	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG00140_ch_T0001116;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001116;transcript_name=HG00140_ch_T0001116;gene_name=NLGN4Y;ID=CDS:HG00140_ch_T0001116:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	15812062	15812064	.	+	0	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG00140_ch_T0001116;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001116;transcript_name=HG00140_ch_T0001116;gene_name=NLGN4Y;ID=start_codon:HG00140_ch_T0001116;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15812534	15913080	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG00140_ch_T0001116;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001116;transcript_name=HG00140_ch_T0001116;gene_name=NLGN4Y;ID=intron:HG00140_ch_T0001116:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15913081	15913233	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG00140_ch_T0001116;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001116;transcript_name=HG00140_ch_T0001116;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001116:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	15913081	15913233	.	+	2	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG00140_ch_T0001116;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001116;transcript_name=HG00140_ch_T0001116;gene_name=NLGN4Y;ID=CDS:HG00140_ch_T0001116:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15913234	16014107	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG00140_ch_T0001116;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001116;transcript_name=HG00140_ch_T0001116;gene_name=NLGN4Y;ID=intron:HG00140_ch_T0001116:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	16014108	16014293	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG00140_ch_T0001116;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001116;transcript_name=HG00140_ch_T0001116;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001116:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	16014108	16014293	.	+	2	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG00140_ch_T0001116;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001116;transcript_name=HG00140_ch_T0001116;gene_name=NLGN4Y;ID=CDS:HG00140_ch_T0001116:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	16014294	16019649	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG00140_ch_T0001116;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001116;transcript_name=HG00140_ch_T0001116;gene_name=NLGN4Y;ID=intron:HG00140_ch_T0001116:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	16019650	16020439	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG00140_ch_T0001116;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001116;transcript_name=HG00140_ch_T0001116;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001116:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	16019650	16020439	.	+	2	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG00140_ch_T0001116;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001116;transcript_name=HG00140_ch_T0001116;gene_name=NLGN4Y;ID=CDS:HG00140_ch_T0001116:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	16020440	16030332	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG00140_ch_T0001116;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001116;transcript_name=HG00140_ch_T0001116;gene_name=NLGN4Y;ID=intron:HG00140_ch_T0001116:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	16030333	16033567	.	+	.	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG00140_ch_T0001116;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001116;transcript_name=HG00140_ch_T0001116;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001116:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	16030333	16031182	.	+	1	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG00140_ch_T0001116;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001116;transcript_name=HG00140_ch_T0001116;gene_name=NLGN4Y;ID=CDS:HG00140_ch_T0001116:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	16031180	16031182	.	+	0	source_transcript=ENST00000339174.9;source_transcript_name=NLGN4Y-201;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000339174.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000339174.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000339174.9,ENST00000339174.9;transcript_id=HG00140_ch_T0001116;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001116;transcript_name=HG00140_ch_T0001116;gene_name=NLGN4Y;ID=stop_codon:HG00140_ch_T0001116;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	15812123	15923519	100	+	.	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=HG00140_ch_T0001117;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_G0000359;transcript_name=HG00140_ch_T0001117;gene_name=NLGN4Y;ID=HG00140_ch_T0001117;Name=NLGN4Y
HG00140_chrY	CAT	exon	15812123	15812533	.	+	.	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=HG00140_ch_T0001117;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001117;transcript_name=HG00140_ch_T0001117;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001117:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	15812123	15812533	.	+	2	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=HG00140_ch_T0001117;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001117;transcript_name=HG00140_ch_T0001117;gene_name=NLGN4Y;ID=CDS:HG00140_ch_T0001117:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15812534	15909413	.	+	.	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=HG00140_ch_T0001117;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001117;transcript_name=HG00140_ch_T0001117;gene_name=NLGN4Y;ID=intron:HG00140_ch_T0001117:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15909414	15909473	.	+	.	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=HG00140_ch_T0001117;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001117;transcript_name=HG00140_ch_T0001117;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001117:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	15909414	15909473	.	+	2	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=HG00140_ch_T0001117;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001117;transcript_name=HG00140_ch_T0001117;gene_name=NLGN4Y;ID=CDS:HG00140_ch_T0001117:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15909474	15913080	.	+	.	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=HG00140_ch_T0001117;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001117;transcript_name=HG00140_ch_T0001117;gene_name=NLGN4Y;ID=intron:HG00140_ch_T0001117:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15913081	15913233	.	+	.	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=HG00140_ch_T0001117;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001117;transcript_name=HG00140_ch_T0001117;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001117:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	15913081	15913233	.	+	2	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=HG00140_ch_T0001117;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001117;transcript_name=HG00140_ch_T0001117;gene_name=NLGN4Y;ID=CDS:HG00140_ch_T0001117:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15913234	15923421	.	+	.	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=HG00140_ch_T0001117;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001117;transcript_name=HG00140_ch_T0001117;gene_name=NLGN4Y;ID=intron:HG00140_ch_T0001117:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15923422	15923519	.	+	.	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=HG00140_ch_T0001117;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001117;transcript_name=HG00140_ch_T0001117;gene_name=NLGN4Y;ID=exon:HG00140_ch_T0001117:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	15923422	15923507	.	+	2	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=HG00140_ch_T0001117;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001117;transcript_name=HG00140_ch_T0001117;gene_name=NLGN4Y;ID=CDS:HG00140_ch_T0001117:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	15923505	15923507	.	+	0	source_transcript=ENST00000413217.1;source_transcript_name=NLGN4Y-205;source_gene=ENSG00000165246.15;source_gene_biotype=protein_coding;original_gene_id=ENSG00000165246.15;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000413217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413217.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=True;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=ENST00000413217.1,ENST00000413217.1;transcript_id=HG00140_ch_T0001117;gene_id=HG00140_ch_G0000359;Parent=HG00140_ch_T0001117;transcript_name=HG00140_ch_T0001117;gene_name=NLGN4Y;ID=stop_codon:HG00140_ch_T0001117;Name=NLGN4Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	15829041	15830303	.	+	.	source_gene_common_name=AGKP1;source_gene=ENSG00000226555.1;alternative_source_transcripts=ENST00000455254.1,ENST00000455254.1;gene_id=HG00140_ch_G0000360;gene_biotype=processed_pseudogene;gene_name=AGKP1;gene_sources=liftoff;ID=HG00140_ch_G0000360;Name=AGKP1
HG00140_chrY	CAT	transcript	15829041	15830303	1000	+	.	source_transcript=ENST00000455254.1;source_transcript_name=AGKP1-201;source_gene=ENSG00000226555.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226555.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000455254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455254.1;transcript_score=199.84199999999998;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AGKP1;alternative_source_transcripts=ENST00000455254.1,ENST00000455254.1;transcript_id=HG00140_ch_T0001118;gene_id=HG00140_ch_G0000360;Parent=HG00140_ch_G0000360;transcript_name=HG00140_ch_T0001118;gene_name=AGKP1;ID=HG00140_ch_T0001118;Name=AGKP1
HG00140_chrY	CAT	exon	15829041	15830303	.	+	.	source_transcript=ENST00000455254.1;source_transcript_name=AGKP1-201;source_gene=ENSG00000226555.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226555.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000455254.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455254.1;transcript_score=199.84199999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AGKP1;alternative_source_transcripts=ENST00000455254.1,ENST00000455254.1;transcript_id=HG00140_ch_T0001118;gene_id=HG00140_ch_G0000360;Parent=HG00140_ch_T0001118;transcript_name=HG00140_ch_T0001118;gene_name=AGKP1;ID=exon:HG00140_ch_T0001118:0;Name=AGKP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	15983604	15993952	.	-	.	source_gene_common_name=NLGN4Y-AS1;source_gene=ENSG00000228787.1;alternative_source_transcripts=ENST00000434164.1,ENST00000434164.1;gene_id=HG00140_ch_G0000361;gene_biotype=lncRNA;gene_name=NLGN4Y-AS1;gene_sources=liftoff;ID=HG00140_ch_G0000361;Name=NLGN4Y-AS1
HG00140_chrY	CAT	transcript	15983604	15993952	1000	-	.	source_transcript=ENST00000434164.1;source_transcript_name=NLGN4Y-AS1-201;source_gene=ENSG00000228787.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228787.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434164.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=ENST00000434164.1,ENST00000434164.1;transcript_id=HG00140_ch_T0001119;gene_id=HG00140_ch_G0000361;Parent=HG00140_ch_G0000361;transcript_name=HG00140_ch_T0001119;gene_name=NLGN4Y-AS1;ID=HG00140_ch_T0001119;Name=NLGN4Y-AS1
HG00140_chrY	CAT	exon	15983604	15983949	.	-	.	source_transcript=ENST00000434164.1;source_transcript_name=NLGN4Y-AS1-201;source_gene=ENSG00000228787.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228787.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=ENST00000434164.1,ENST00000434164.1;transcript_id=HG00140_ch_T0001119;gene_id=HG00140_ch_G0000361;Parent=HG00140_ch_T0001119;transcript_name=HG00140_ch_T0001119;gene_name=NLGN4Y-AS1;ID=exon:HG00140_ch_T0001119:0;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15983950	15988583	.	-	.	source_transcript=ENST00000434164.1;source_transcript_name=NLGN4Y-AS1-201;source_gene=ENSG00000228787.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228787.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=ENST00000434164.1,ENST00000434164.1;transcript_id=HG00140_ch_T0001119;gene_id=HG00140_ch_G0000361;Parent=HG00140_ch_T0001119;transcript_name=HG00140_ch_T0001119;gene_name=NLGN4Y-AS1;ID=intron:HG00140_ch_T0001119:0;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15988584	15988671	.	-	.	source_transcript=ENST00000434164.1;source_transcript_name=NLGN4Y-AS1-201;source_gene=ENSG00000228787.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228787.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=ENST00000434164.1,ENST00000434164.1;transcript_id=HG00140_ch_T0001119;gene_id=HG00140_ch_G0000361;Parent=HG00140_ch_T0001119;transcript_name=HG00140_ch_T0001119;gene_name=NLGN4Y-AS1;ID=exon:HG00140_ch_T0001119:1;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15988672	15991237	.	-	.	source_transcript=ENST00000434164.1;source_transcript_name=NLGN4Y-AS1-201;source_gene=ENSG00000228787.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228787.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=ENST00000434164.1,ENST00000434164.1;transcript_id=HG00140_ch_T0001119;gene_id=HG00140_ch_G0000361;Parent=HG00140_ch_T0001119;transcript_name=HG00140_ch_T0001119;gene_name=NLGN4Y-AS1;ID=intron:HG00140_ch_T0001119:1;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15991238	15991306	.	-	.	source_transcript=ENST00000434164.1;source_transcript_name=NLGN4Y-AS1-201;source_gene=ENSG00000228787.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228787.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=ENST00000434164.1,ENST00000434164.1;transcript_id=HG00140_ch_T0001119;gene_id=HG00140_ch_G0000361;Parent=HG00140_ch_T0001119;transcript_name=HG00140_ch_T0001119;gene_name=NLGN4Y-AS1;ID=exon:HG00140_ch_T0001119:2;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	15991307	15993923	.	-	.	source_transcript=ENST00000434164.1;source_transcript_name=NLGN4Y-AS1-201;source_gene=ENSG00000228787.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228787.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=ENST00000434164.1,ENST00000434164.1;transcript_id=HG00140_ch_T0001119;gene_id=HG00140_ch_G0000361;Parent=HG00140_ch_T0001119;transcript_name=HG00140_ch_T0001119;gene_name=NLGN4Y-AS1;ID=intron:HG00140_ch_T0001119:2;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	15993924	15993952	.	-	.	source_transcript=ENST00000434164.1;source_transcript_name=NLGN4Y-AS1-201;source_gene=ENSG00000228787.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228787.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000434164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=ENST00000434164.1,ENST00000434164.1;transcript_id=HG00140_ch_T0001119;gene_id=HG00140_ch_G0000361;Parent=HG00140_ch_T0001119;transcript_name=HG00140_ch_T0001119;gene_name=NLGN4Y-AS1;ID=exon:HG00140_ch_T0001119:3;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	16097817	16097987	.	+	.	source_gene_common_name=MED13P1;source_gene=ENSG00000236131.1;alternative_source_transcripts=ENST00000428342.1,ENST00000428342.1;gene_id=HG00140_ch_G0000362;gene_biotype=processed_pseudogene;gene_name=MED13P1;gene_sources=liftoff;ID=HG00140_ch_G0000362;Name=MED13P1
HG00140_chrY	CAT	transcript	16097817	16097987	1000	+	.	source_transcript=ENST00000428342.1;source_transcript_name=MED13P1-201;source_gene=ENSG00000236131.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000236131.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428342.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428342.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED13P1;alternative_source_transcripts=ENST00000428342.1,ENST00000428342.1;transcript_id=HG00140_ch_T0001120;gene_id=HG00140_ch_G0000362;Parent=HG00140_ch_G0000362;transcript_name=HG00140_ch_T0001120;gene_name=MED13P1;ID=HG00140_ch_T0001120;Name=MED13P1
HG00140_chrY	CAT	exon	16097817	16097987	.	+	.	source_transcript=ENST00000428342.1;source_transcript_name=MED13P1-201;source_gene=ENSG00000236131.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000236131.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428342.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428342.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MED13P1;alternative_source_transcripts=ENST00000428342.1,ENST00000428342.1;transcript_id=HG00140_ch_T0001120;gene_id=HG00140_ch_G0000362;Parent=HG00140_ch_T0001120;transcript_name=HG00140_ch_T0001120;gene_name=MED13P1;ID=exon:HG00140_ch_T0001120:0;Name=MED13P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	16115615	16116767	.	-	.	source_gene_common_name=ENSG00000304558;source_gene=ENSG00000304558.1;alternative_source_transcripts=ENST00000804523.1,ENST00000804523.1;gene_id=HG00140_ch_G0000363;gene_biotype=lncRNA;gene_name=ENSG00000304558;gene_sources=liftoff;ID=HG00140_ch_G0000363;Name=ENSG00000304558
HG00140_chrY	CAT	transcript	16115615	16116767	1000	-	.	source_transcript=ENST00000804523.1;source_transcript_name=ENST00000804523;source_gene=ENSG00000304558.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304558.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000804523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000804523.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304558;alternative_source_transcripts=ENST00000804523.1,ENST00000804523.1;transcript_id=HG00140_ch_T0001121;gene_id=HG00140_ch_G0000363;Parent=HG00140_ch_G0000363;transcript_name=HG00140_ch_T0001121;gene_name=ENSG00000304558;ID=HG00140_ch_T0001121;Name=ENSG00000304558
HG00140_chrY	CAT	exon	16115615	16116493	.	-	.	source_transcript=ENST00000804523.1;source_transcript_name=ENST00000804523;source_gene=ENSG00000304558.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304558.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000804523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000804523.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304558;alternative_source_transcripts=ENST00000804523.1,ENST00000804523.1;transcript_id=HG00140_ch_T0001121;gene_id=HG00140_ch_G0000363;Parent=HG00140_ch_T0001121;transcript_name=HG00140_ch_T0001121;gene_name=ENSG00000304558;ID=exon:HG00140_ch_T0001121:0;Name=ENSG00000304558;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	16116494	16116649	.	-	.	source_transcript=ENST00000804523.1;source_transcript_name=ENST00000804523;source_gene=ENSG00000304558.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304558.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000804523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000804523.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304558;alternative_source_transcripts=ENST00000804523.1,ENST00000804523.1;transcript_id=HG00140_ch_T0001121;gene_id=HG00140_ch_G0000363;Parent=HG00140_ch_T0001121;transcript_name=HG00140_ch_T0001121;gene_name=ENSG00000304558;ID=intron:HG00140_ch_T0001121:0;Name=ENSG00000304558;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	16116650	16116767	.	-	.	source_transcript=ENST00000804523.1;source_transcript_name=ENST00000804523;source_gene=ENSG00000304558.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304558.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000804523.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000804523.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304558;alternative_source_transcripts=ENST00000804523.1,ENST00000804523.1;transcript_id=HG00140_ch_T0001121;gene_id=HG00140_ch_G0000363;Parent=HG00140_ch_T0001121;transcript_name=HG00140_ch_T0001121;gene_name=ENSG00000304558;ID=exon:HG00140_ch_T0001121:1;Name=ENSG00000304558;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	16131464	16131667	.	-	.	source_gene_common_name=CYCSP46;source_gene=ENSG00000227949.1;alternative_source_transcripts=ENST00000423569.1,ENST00000423569.1;gene_id=HG00140_ch_G0000364;gene_biotype=processed_pseudogene;gene_name=CYCSP46;gene_sources=liftoff;ID=HG00140_ch_G0000364;Name=CYCSP46
HG00140_chrY	CAT	transcript	16131464	16131667	1000	-	.	source_transcript=ENST00000423569.1;source_transcript_name=CYCSP46-201;source_gene=ENSG00000227949.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227949.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000423569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423569.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CYCSP46;alternative_source_transcripts=ENST00000423569.1,ENST00000423569.1;transcript_id=HG00140_ch_T0001122;gene_id=HG00140_ch_G0000364;Parent=HG00140_ch_G0000364;transcript_name=HG00140_ch_T0001122;gene_name=CYCSP46;ID=HG00140_ch_T0001122;Name=CYCSP46
HG00140_chrY	CAT	exon	16131464	16131667	.	-	.	source_transcript=ENST00000423569.1;source_transcript_name=CYCSP46-201;source_gene=ENSG00000227949.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227949.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000423569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423569.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CYCSP46;alternative_source_transcripts=ENST00000423569.1,ENST00000423569.1;transcript_id=HG00140_ch_T0001122;gene_id=HG00140_ch_G0000364;Parent=HG00140_ch_T0001122;transcript_name=HG00140_ch_T0001122;gene_name=CYCSP46;ID=exon:HG00140_ch_T0001122:0;Name=CYCSP46;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	16131663	16132632	.	+	.	source_gene_common_name=ENSG00000224518;source_gene=ENSG00000224518.2;alternative_source_transcripts=ENST00000427212.2,ENST00000427212.2;gene_id=HG00140_ch_G0000365;gene_biotype=processed_pseudogene;gene_name=ENSG00000224518;gene_sources=liftoff;ID=HG00140_ch_G0000365;Name=ENSG00000224518
HG00140_chrY	CAT	transcript	16131663	16132632	1000	+	.	source_transcript=ENST00000427212.2;source_transcript_name=ENST00000427212;source_gene=ENSG00000224518.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224518.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000427212.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000427212.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224518;alternative_source_transcripts=ENST00000427212.2,ENST00000427212.2;transcript_id=HG00140_ch_T0001123;gene_id=HG00140_ch_G0000365;Parent=HG00140_ch_G0000365;transcript_name=HG00140_ch_T0001123;gene_name=ENSG00000224518;ID=HG00140_ch_T0001123;Name=ENSG00000224518
HG00140_chrY	CAT	exon	16131663	16131738	.	+	.	source_transcript=ENST00000427212.2;source_transcript_name=ENST00000427212;source_gene=ENSG00000224518.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224518.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000427212.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000427212.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224518;alternative_source_transcripts=ENST00000427212.2,ENST00000427212.2;transcript_id=HG00140_ch_T0001123;gene_id=HG00140_ch_G0000365;Parent=HG00140_ch_T0001123;transcript_name=HG00140_ch_T0001123;gene_name=ENSG00000224518;ID=exon:HG00140_ch_T0001123:0;Name=ENSG00000224518;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	16131739	16132577	.	+	.	source_transcript=ENST00000427212.2;source_transcript_name=ENST00000427212;source_gene=ENSG00000224518.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224518.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000427212.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000427212.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224518;alternative_source_transcripts=ENST00000427212.2,ENST00000427212.2;transcript_id=HG00140_ch_T0001123;gene_id=HG00140_ch_G0000365;Parent=HG00140_ch_T0001123;transcript_name=HG00140_ch_T0001123;gene_name=ENSG00000224518;ID=intron:HG00140_ch_T0001123:0;Name=ENSG00000224518;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	16132578	16132632	.	+	.	source_transcript=ENST00000427212.2;source_transcript_name=ENST00000427212;source_gene=ENSG00000224518.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224518.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000427212.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000427212.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224518;alternative_source_transcripts=ENST00000427212.2,ENST00000427212.2;transcript_id=HG00140_ch_T0001123;gene_id=HG00140_ch_G0000365;Parent=HG00140_ch_T0001123;transcript_name=HG00140_ch_T0001123;gene_name=ENSG00000224518;ID=exon:HG00140_ch_T0001123:1;Name=ENSG00000224518;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	16538562	16645974	.	-	.	source_gene_common_name=PUDPP1;source_gene=ENSG00000234620.1;alternative_source_transcripts=ENST00000421058.1,ENST00000421058.1;gene_id=HG00140_ch_G0000366;gene_biotype=unprocessed_pseudogene;gene_name=PUDPP1;gene_sources=liftoff;ID=HG00140_ch_G0000366;Name=PUDPP1
HG00140_chrY	CAT	transcript	16538562	16645974	1000	-	.	source_transcript=ENST00000421058.1;source_transcript_name=PUDPP1-201;source_gene=ENSG00000234620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421058.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421058.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PUDPP1;alternative_source_transcripts=ENST00000421058.1,ENST00000421058.1;transcript_id=HG00140_ch_T0001124;gene_id=HG00140_ch_G0000366;Parent=HG00140_ch_G0000366;transcript_name=HG00140_ch_T0001124;gene_name=PUDPP1;ID=HG00140_ch_T0001124;Name=PUDPP1
HG00140_chrY	CAT	exon	16538562	16538766	.	-	.	source_transcript=ENST00000421058.1;source_transcript_name=PUDPP1-201;source_gene=ENSG00000234620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421058.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421058.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PUDPP1;alternative_source_transcripts=ENST00000421058.1,ENST00000421058.1;transcript_id=HG00140_ch_T0001124;gene_id=HG00140_ch_G0000366;Parent=HG00140_ch_T0001124;transcript_name=HG00140_ch_T0001124;gene_name=PUDPP1;ID=exon:HG00140_ch_T0001124:0;Name=PUDPP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	16538767	16571489	.	-	.	source_transcript=ENST00000421058.1;source_transcript_name=PUDPP1-201;source_gene=ENSG00000234620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421058.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421058.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PUDPP1;alternative_source_transcripts=ENST00000421058.1,ENST00000421058.1;transcript_id=HG00140_ch_T0001124;gene_id=HG00140_ch_G0000366;Parent=HG00140_ch_T0001124;transcript_name=HG00140_ch_T0001124;gene_name=PUDPP1;ID=intron:HG00140_ch_T0001124:0;Name=PUDPP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	16571490	16571739	.	-	.	source_transcript=ENST00000421058.1;source_transcript_name=PUDPP1-201;source_gene=ENSG00000234620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421058.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421058.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PUDPP1;alternative_source_transcripts=ENST00000421058.1,ENST00000421058.1;transcript_id=HG00140_ch_T0001124;gene_id=HG00140_ch_G0000366;Parent=HG00140_ch_T0001124;transcript_name=HG00140_ch_T0001124;gene_name=PUDPP1;ID=exon:HG00140_ch_T0001124:1;Name=PUDPP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	16571740	16645934	.	-	.	source_transcript=ENST00000421058.1;source_transcript_name=PUDPP1-201;source_gene=ENSG00000234620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421058.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421058.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PUDPP1;alternative_source_transcripts=ENST00000421058.1,ENST00000421058.1;transcript_id=HG00140_ch_T0001124;gene_id=HG00140_ch_G0000366;Parent=HG00140_ch_T0001124;transcript_name=HG00140_ch_T0001124;gene_name=PUDPP1;ID=intron:HG00140_ch_T0001124:1;Name=PUDPP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	16645935	16645974	.	-	.	source_transcript=ENST00000421058.1;source_transcript_name=PUDPP1-201;source_gene=ENSG00000234620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421058.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421058.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PUDPP1;alternative_source_transcripts=ENST00000421058.1,ENST00000421058.1;transcript_id=HG00140_ch_T0001124;gene_id=HG00140_ch_G0000366;Parent=HG00140_ch_T0001124;transcript_name=HG00140_ch_T0001124;gene_name=PUDPP1;ID=exon:HG00140_ch_T0001124:2;Name=PUDPP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	16645907	16759062	.	+	.	source_gene_common_name=ENSG00000295583;source_gene=ENSG00000295583.1;gene_id=HG00140_ch_G0000367;gene_biotype=lncRNA;gene_name=ENSG00000295583;gene_sources=liftoff;ID=HG00140_ch_G0000367;Name=ENSG00000295583
HG00140_chrY	CAT	transcript	16645907	16757054	1000	+	.	source_transcript=ENST00000731061.1;source_transcript_name=ENST00000731061;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731061.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731061.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001125;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_G0000367;transcript_name=HG00140_ch_T0001125;gene_name=ENSG00000295583;ID=HG00140_ch_T0001125;Name=ENSG00000295583
HG00140_chrY	CAT	exon	16645907	16645968	.	+	.	source_transcript=ENST00000731061.1;source_transcript_name=ENST00000731061;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731061.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731061.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001125;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_T0001125;transcript_name=HG00140_ch_T0001125;gene_name=ENSG00000295583;ID=exon:HG00140_ch_T0001125:0;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	16645969	16650194	.	+	.	source_transcript=ENST00000731061.1;source_transcript_name=ENST00000731061;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731061.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731061.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001125;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_T0001125;transcript_name=HG00140_ch_T0001125;gene_name=ENSG00000295583;ID=intron:HG00140_ch_T0001125:0;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	16650195	16650276	.	+	.	source_transcript=ENST00000731061.1;source_transcript_name=ENST00000731061;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731061.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731061.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001125;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_T0001125;transcript_name=HG00140_ch_T0001125;gene_name=ENSG00000295583;ID=exon:HG00140_ch_T0001125:1;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	16650277	16737122	.	+	.	source_transcript=ENST00000731061.1;source_transcript_name=ENST00000731061;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731061.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731061.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001125;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_T0001125;transcript_name=HG00140_ch_T0001125;gene_name=ENSG00000295583;ID=intron:HG00140_ch_T0001125:1;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	16737123	16737263	.	+	.	source_transcript=ENST00000731061.1;source_transcript_name=ENST00000731061;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731061.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731061.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001125;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_T0001125;transcript_name=HG00140_ch_T0001125;gene_name=ENSG00000295583;ID=exon:HG00140_ch_T0001125:2;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	16737264	16739515	.	+	.	source_transcript=ENST00000731061.1;source_transcript_name=ENST00000731061;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731061.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731061.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001125;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_T0001125;transcript_name=HG00140_ch_T0001125;gene_name=ENSG00000295583;ID=intron:HG00140_ch_T0001125:2;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	16739516	16739637	.	+	.	source_transcript=ENST00000731061.1;source_transcript_name=ENST00000731061;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731061.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731061.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001125;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_T0001125;transcript_name=HG00140_ch_T0001125;gene_name=ENSG00000295583;ID=exon:HG00140_ch_T0001125:3;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	16739638	16756684	.	+	.	source_transcript=ENST00000731061.1;source_transcript_name=ENST00000731061;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731061.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731061.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001125;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_T0001125;transcript_name=HG00140_ch_T0001125;gene_name=ENSG00000295583;ID=intron:HG00140_ch_T0001125:3;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	16756685	16757054	.	+	.	source_transcript=ENST00000731061.1;source_transcript_name=ENST00000731061;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731061.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731061.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001125;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_T0001125;transcript_name=HG00140_ch_T0001125;gene_name=ENSG00000295583;ID=exon:HG00140_ch_T0001125:4;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	16645913	16759062	1000	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001126;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_G0000367;transcript_name=HG00140_ch_T0001126;gene_name=ENSG00000295583;ID=HG00140_ch_T0001126;Name=ENSG00000295583
HG00140_chrY	CAT	exon	16645913	16645968	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001126;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_T0001126;transcript_name=HG00140_ch_T0001126;gene_name=ENSG00000295583;ID=exon:HG00140_ch_T0001126:0;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	16645969	16650194	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001126;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_T0001126;transcript_name=HG00140_ch_T0001126;gene_name=ENSG00000295583;ID=intron:HG00140_ch_T0001126:0;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	16650195	16650276	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001126;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_T0001126;transcript_name=HG00140_ch_T0001126;gene_name=ENSG00000295583;ID=exon:HG00140_ch_T0001126:1;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	16650277	16737122	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001126;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_T0001126;transcript_name=HG00140_ch_T0001126;gene_name=ENSG00000295583;ID=intron:HG00140_ch_T0001126:1;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	16737123	16737263	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001126;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_T0001126;transcript_name=HG00140_ch_T0001126;gene_name=ENSG00000295583;ID=exon:HG00140_ch_T0001126:2;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	16737264	16739515	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001126;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_T0001126;transcript_name=HG00140_ch_T0001126;gene_name=ENSG00000295583;ID=intron:HG00140_ch_T0001126:2;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	16739516	16739637	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001126;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_T0001126;transcript_name=HG00140_ch_T0001126;gene_name=ENSG00000295583;ID=exon:HG00140_ch_T0001126:3;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	16739638	16756684	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001126;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_T0001126;transcript_name=HG00140_ch_T0001126;gene_name=ENSG00000295583;ID=intron:HG00140_ch_T0001126:3;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	16756685	16756821	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001126;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_T0001126;transcript_name=HG00140_ch_T0001126;gene_name=ENSG00000295583;ID=exon:HG00140_ch_T0001126:4;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	16756822	16758945	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001126;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_T0001126;transcript_name=HG00140_ch_T0001126;gene_name=ENSG00000295583;ID=intron:HG00140_ch_T0001126:4;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	16758946	16759062	.	+	.	source_transcript=ENST00000731060.1;source_transcript_name=ENST00000731060;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731060.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731060.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001126;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_T0001126;transcript_name=HG00140_ch_T0001126;gene_name=ENSG00000295583;ID=exon:HG00140_ch_T0001126:5;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	16645932	16651584	1000	+	.	source_transcript=ENST00000731062.1;source_transcript_name=ENST00000731062;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731062.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001127;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_G0000367;transcript_name=HG00140_ch_T0001127;gene_name=ENSG00000295583;ID=HG00140_ch_T0001127;Name=ENSG00000295583
HG00140_chrY	CAT	exon	16645932	16645968	.	+	.	source_transcript=ENST00000731062.1;source_transcript_name=ENST00000731062;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001127;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_T0001127;transcript_name=HG00140_ch_T0001127;gene_name=ENSG00000295583;ID=exon:HG00140_ch_T0001127:0;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	16645969	16650194	.	+	.	source_transcript=ENST00000731062.1;source_transcript_name=ENST00000731062;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001127;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_T0001127;transcript_name=HG00140_ch_T0001127;gene_name=ENSG00000295583;ID=intron:HG00140_ch_T0001127:0;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	16650195	16650276	.	+	.	source_transcript=ENST00000731062.1;source_transcript_name=ENST00000731062;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001127;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_T0001127;transcript_name=HG00140_ch_T0001127;gene_name=ENSG00000295583;ID=exon:HG00140_ch_T0001127:1;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	16650277	16650599	.	+	.	source_transcript=ENST00000731062.1;source_transcript_name=ENST00000731062;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001127;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_T0001127;transcript_name=HG00140_ch_T0001127;gene_name=ENSG00000295583;ID=intron:HG00140_ch_T0001127:1;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	16650600	16651584	.	+	.	source_transcript=ENST00000731062.1;source_transcript_name=ENST00000731062;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731062.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731062.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001127;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_T0001127;transcript_name=HG00140_ch_T0001127;gene_name=ENSG00000295583;ID=exon:HG00140_ch_T0001127:2;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	16645940	16650409	1000	+	.	source_transcript=ENST00000731065.1;source_transcript_name=ENST00000731065;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731065.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001128;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_G0000367;transcript_name=HG00140_ch_T0001128;gene_name=ENSG00000295583;ID=HG00140_ch_T0001128;Name=ENSG00000295583
HG00140_chrY	CAT	exon	16645940	16646740	.	+	.	source_transcript=ENST00000731065.1;source_transcript_name=ENST00000731065;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001128;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_T0001128;transcript_name=HG00140_ch_T0001128;gene_name=ENSG00000295583;ID=exon:HG00140_ch_T0001128:0;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	16646741	16650194	.	+	.	source_transcript=ENST00000731065.1;source_transcript_name=ENST00000731065;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001128;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_T0001128;transcript_name=HG00140_ch_T0001128;gene_name=ENSG00000295583;ID=intron:HG00140_ch_T0001128:0;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	16650195	16650409	.	+	.	source_transcript=ENST00000731065.1;source_transcript_name=ENST00000731065;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001128;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_T0001128;transcript_name=HG00140_ch_T0001128;gene_name=ENSG00000295583;ID=exon:HG00140_ch_T0001128:1;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	16646105	16651584	1000	+	.	source_transcript=ENST00000731063.1;source_transcript_name=ENST00000731063;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731063.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731063.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001129;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_G0000367;transcript_name=HG00140_ch_T0001129;gene_name=ENSG00000295583;ID=HG00140_ch_T0001129;Name=ENSG00000295583
HG00140_chrY	CAT	exon	16646105	16646740	.	+	.	source_transcript=ENST00000731063.1;source_transcript_name=ENST00000731063;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731063.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731063.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001129;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_T0001129;transcript_name=HG00140_ch_T0001129;gene_name=ENSG00000295583;ID=exon:HG00140_ch_T0001129:0;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	16646741	16650194	.	+	.	source_transcript=ENST00000731063.1;source_transcript_name=ENST00000731063;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731063.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731063.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001129;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_T0001129;transcript_name=HG00140_ch_T0001129;gene_name=ENSG00000295583;ID=intron:HG00140_ch_T0001129:0;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	16650195	16650276	.	+	.	source_transcript=ENST00000731063.1;source_transcript_name=ENST00000731063;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731063.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731063.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001129;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_T0001129;transcript_name=HG00140_ch_T0001129;gene_name=ENSG00000295583;ID=exon:HG00140_ch_T0001129:1;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	16650277	16650599	.	+	.	source_transcript=ENST00000731063.1;source_transcript_name=ENST00000731063;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731063.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731063.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001129;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_T0001129;transcript_name=HG00140_ch_T0001129;gene_name=ENSG00000295583;ID=intron:HG00140_ch_T0001129:1;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	16650600	16651584	.	+	.	source_transcript=ENST00000731063.1;source_transcript_name=ENST00000731063;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731063.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731063.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001129;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_T0001129;transcript_name=HG00140_ch_T0001129;gene_name=ENSG00000295583;ID=exon:HG00140_ch_T0001129:2;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	16646235	16647279	1000	+	.	source_transcript=ENST00000731067.1;source_transcript_name=ENST00000731067;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731067.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731067.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001130;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_G0000367;transcript_name=HG00140_ch_T0001130;gene_name=ENSG00000295583;ID=HG00140_ch_T0001130;Name=ENSG00000295583
HG00140_chrY	CAT	exon	16646235	16646740	.	+	.	source_transcript=ENST00000731067.1;source_transcript_name=ENST00000731067;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731067.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731067.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001130;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_T0001130;transcript_name=HG00140_ch_T0001130;gene_name=ENSG00000295583;ID=exon:HG00140_ch_T0001130:0;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	16646741	16646824	.	+	.	source_transcript=ENST00000731067.1;source_transcript_name=ENST00000731067;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731067.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731067.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001130;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_T0001130;transcript_name=HG00140_ch_T0001130;gene_name=ENSG00000295583;ID=intron:HG00140_ch_T0001130:0;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	16646825	16647279	.	+	.	source_transcript=ENST00000731067.1;source_transcript_name=ENST00000731067;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731067.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731067.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001130;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_T0001130;transcript_name=HG00140_ch_T0001130;gene_name=ENSG00000295583;ID=exon:HG00140_ch_T0001130:1;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	16646235	16650736	1000	+	.	source_transcript=ENST00000731064.1;source_transcript_name=ENST00000731064;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731064.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731064.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001131;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_G0000367;transcript_name=HG00140_ch_T0001131;gene_name=ENSG00000295583;ID=HG00140_ch_T0001131;Name=ENSG00000295583
HG00140_chrY	CAT	exon	16646235	16646384	.	+	.	source_transcript=ENST00000731064.1;source_transcript_name=ENST00000731064;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731064.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731064.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001131;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_T0001131;transcript_name=HG00140_ch_T0001131;gene_name=ENSG00000295583;ID=exon:HG00140_ch_T0001131:0;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	16646385	16650194	.	+	.	source_transcript=ENST00000731064.1;source_transcript_name=ENST00000731064;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731064.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731064.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001131;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_T0001131;transcript_name=HG00140_ch_T0001131;gene_name=ENSG00000295583;ID=intron:HG00140_ch_T0001131:0;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	16650195	16650276	.	+	.	source_transcript=ENST00000731064.1;source_transcript_name=ENST00000731064;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731064.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731064.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001131;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_T0001131;transcript_name=HG00140_ch_T0001131;gene_name=ENSG00000295583;ID=exon:HG00140_ch_T0001131:1;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	16650277	16650599	.	+	.	source_transcript=ENST00000731064.1;source_transcript_name=ENST00000731064;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731064.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731064.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001131;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_T0001131;transcript_name=HG00140_ch_T0001131;gene_name=ENSG00000295583;ID=intron:HG00140_ch_T0001131:1;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	16650600	16650736	.	+	.	source_transcript=ENST00000731064.1;source_transcript_name=ENST00000731064;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731064.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731064.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001131;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_T0001131;transcript_name=HG00140_ch_T0001131;gene_name=ENSG00000295583;ID=exon:HG00140_ch_T0001131:2;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	16646239	16650409	1000	+	.	source_transcript=ENST00000731066.1;source_transcript_name=ENST00000731066;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731066.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731066.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001132;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_G0000367;transcript_name=HG00140_ch_T0001132;gene_name=ENSG00000295583;ID=HG00140_ch_T0001132;Name=ENSG00000295583
HG00140_chrY	CAT	exon	16646239	16646740	.	+	.	source_transcript=ENST00000731066.1;source_transcript_name=ENST00000731066;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731066.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731066.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001132;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_T0001132;transcript_name=HG00140_ch_T0001132;gene_name=ENSG00000295583;ID=exon:HG00140_ch_T0001132:0;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	16646741	16649864	.	+	.	source_transcript=ENST00000731066.1;source_transcript_name=ENST00000731066;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731066.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731066.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001132;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_T0001132;transcript_name=HG00140_ch_T0001132;gene_name=ENSG00000295583;ID=intron:HG00140_ch_T0001132:0;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	16649865	16649984	.	+	.	source_transcript=ENST00000731066.1;source_transcript_name=ENST00000731066;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731066.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731066.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001132;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_T0001132;transcript_name=HG00140_ch_T0001132;gene_name=ENSG00000295583;ID=exon:HG00140_ch_T0001132:1;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	16649985	16650194	.	+	.	source_transcript=ENST00000731066.1;source_transcript_name=ENST00000731066;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731066.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731066.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001132;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_T0001132;transcript_name=HG00140_ch_T0001132;gene_name=ENSG00000295583;ID=intron:HG00140_ch_T0001132:1;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	16650195	16650409	.	+	.	source_transcript=ENST00000731066.1;source_transcript_name=ENST00000731066;source_gene=ENSG00000295583.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295583.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000731066.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000731066.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295583;transcript_id=HG00140_ch_T0001132;gene_id=HG00140_ch_G0000367;Parent=HG00140_ch_T0001132;transcript_name=HG00140_ch_T0001132;gene_name=ENSG00000295583;ID=exon:HG00140_ch_T0001132:2;Name=ENSG00000295583;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	16737121	16783248	.	+	.	source_gene_common_name=STSP1;source_gene=ENSG00000227166.1;gene_id=HG00140_ch_G0000368;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=STSP1;gene_sources=liftoff;ID=HG00140_ch_G0000368;Name=STSP1
HG00140_chrY	CAT	transcript	16737121	16783248	1000	+	.	source_transcript=ENST00000412493.1;source_transcript_name=STSP1-201;source_gene=ENSG00000227166.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227166.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000412493.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412493.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=STSP1;transcript_id=HG00140_ch_T0001133;gene_id=HG00140_ch_G0000368;Parent=HG00140_ch_G0000368;transcript_name=HG00140_ch_T0001133;gene_name=STSP1;ID=HG00140_ch_T0001133;Name=STSP1
HG00140_chrY	CAT	exon	16737121	16737263	.	+	.	source_transcript=ENST00000412493.1;source_transcript_name=STSP1-201;source_gene=ENSG00000227166.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227166.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000412493.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412493.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=STSP1;transcript_id=HG00140_ch_T0001133;gene_id=HG00140_ch_G0000368;Parent=HG00140_ch_T0001133;transcript_name=HG00140_ch_T0001133;gene_name=STSP1;ID=exon:HG00140_ch_T0001133:0;Name=STSP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	16737264	16739515	.	+	.	source_transcript=ENST00000412493.1;source_transcript_name=STSP1-201;source_gene=ENSG00000227166.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227166.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000412493.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412493.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=STSP1;transcript_id=HG00140_ch_T0001133;gene_id=HG00140_ch_G0000368;Parent=HG00140_ch_T0001133;transcript_name=HG00140_ch_T0001133;gene_name=STSP1;ID=intron:HG00140_ch_T0001133:0;Name=STSP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	16739516	16739846	.	+	.	source_transcript=ENST00000412493.1;source_transcript_name=STSP1-201;source_gene=ENSG00000227166.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227166.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000412493.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412493.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=STSP1;transcript_id=HG00140_ch_T0001133;gene_id=HG00140_ch_G0000368;Parent=HG00140_ch_T0001133;transcript_name=HG00140_ch_T0001133;gene_name=STSP1;ID=exon:HG00140_ch_T0001133:1;Name=STSP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	16739847	16741492	.	+	.	source_transcript=ENST00000412493.1;source_transcript_name=STSP1-201;source_gene=ENSG00000227166.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227166.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000412493.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412493.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=STSP1;transcript_id=HG00140_ch_T0001133;gene_id=HG00140_ch_G0000368;Parent=HG00140_ch_T0001133;transcript_name=HG00140_ch_T0001133;gene_name=STSP1;ID=intron:HG00140_ch_T0001133:1;Name=STSP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	16741493	16741911	.	+	.	source_transcript=ENST00000412493.1;source_transcript_name=STSP1-201;source_gene=ENSG00000227166.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227166.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000412493.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412493.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=STSP1;transcript_id=HG00140_ch_T0001133;gene_id=HG00140_ch_G0000368;Parent=HG00140_ch_T0001133;transcript_name=HG00140_ch_T0001133;gene_name=STSP1;ID=exon:HG00140_ch_T0001133:2;Name=STSP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	16741912	16756684	.	+	.	source_transcript=ENST00000412493.1;source_transcript_name=STSP1-201;source_gene=ENSG00000227166.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227166.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000412493.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412493.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=STSP1;transcript_id=HG00140_ch_T0001133;gene_id=HG00140_ch_G0000368;Parent=HG00140_ch_T0001133;transcript_name=HG00140_ch_T0001133;gene_name=STSP1;ID=intron:HG00140_ch_T0001133:2;Name=STSP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	16756685	16756841	.	+	.	source_transcript=ENST00000412493.1;source_transcript_name=STSP1-201;source_gene=ENSG00000227166.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227166.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000412493.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412493.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=STSP1;transcript_id=HG00140_ch_T0001133;gene_id=HG00140_ch_G0000368;Parent=HG00140_ch_T0001133;transcript_name=HG00140_ch_T0001133;gene_name=STSP1;ID=exon:HG00140_ch_T0001133:3;Name=STSP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	16756842	16783147	.	+	.	source_transcript=ENST00000412493.1;source_transcript_name=STSP1-201;source_gene=ENSG00000227166.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227166.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000412493.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412493.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=STSP1;transcript_id=HG00140_ch_T0001133;gene_id=HG00140_ch_G0000368;Parent=HG00140_ch_T0001133;transcript_name=HG00140_ch_T0001133;gene_name=STSP1;ID=intron:HG00140_ch_T0001133:3;Name=STSP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	16783148	16783248	.	+	.	source_transcript=ENST00000412493.1;source_transcript_name=STSP1-201;source_gene=ENSG00000227166.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227166.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000412493.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412493.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=STSP1;transcript_id=HG00140_ch_T0001133;gene_id=HG00140_ch_G0000368;Parent=HG00140_ch_T0001133;transcript_name=HG00140_ch_T0001133;gene_name=STSP1;ID=exon:HG00140_ch_T0001133:4;Name=STSP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	16880269	16888190	.	-	.	source_gene_common_name=ENSG00000295335;source_gene=ENSG00000295335.1;alternative_source_transcripts=ENST00000729374.1,ENST00000729374.1;gene_id=HG00140_ch_G0000369;gene_biotype=lncRNA;gene_name=ENSG00000295335;gene_sources=liftoff;ID=HG00140_ch_G0000369;Name=ENSG00000295335
HG00140_chrY	CAT	transcript	16880269	16888190	1000	-	.	source_transcript=ENST00000729374.1;source_transcript_name=ENST00000729374;source_gene=ENSG00000295335.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295335.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729374.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295335;alternative_source_transcripts=ENST00000729374.1,ENST00000729374.1;transcript_id=HG00140_ch_T0001134;gene_id=HG00140_ch_G0000369;Parent=HG00140_ch_G0000369;transcript_name=HG00140_ch_T0001134;gene_name=ENSG00000295335;ID=HG00140_ch_T0001134;Name=ENSG00000295335
HG00140_chrY	CAT	exon	16880269	16880623	.	-	.	source_transcript=ENST00000729374.1;source_transcript_name=ENST00000729374;source_gene=ENSG00000295335.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295335.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295335;alternative_source_transcripts=ENST00000729374.1,ENST00000729374.1;transcript_id=HG00140_ch_T0001134;gene_id=HG00140_ch_G0000369;Parent=HG00140_ch_T0001134;transcript_name=HG00140_ch_T0001134;gene_name=ENSG00000295335;ID=exon:HG00140_ch_T0001134:0;Name=ENSG00000295335;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	16880624	16888146	.	-	.	source_transcript=ENST00000729374.1;source_transcript_name=ENST00000729374;source_gene=ENSG00000295335.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295335.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295335;alternative_source_transcripts=ENST00000729374.1,ENST00000729374.1;transcript_id=HG00140_ch_T0001134;gene_id=HG00140_ch_G0000369;Parent=HG00140_ch_T0001134;transcript_name=HG00140_ch_T0001134;gene_name=ENSG00000295335;ID=intron:HG00140_ch_T0001134:0;Name=ENSG00000295335;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	16888147	16888190	.	-	.	source_transcript=ENST00000729374.1;source_transcript_name=ENST00000729374;source_gene=ENSG00000295335.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295335.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729374.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295335;alternative_source_transcripts=ENST00000729374.1,ENST00000729374.1;transcript_id=HG00140_ch_T0001134;gene_id=HG00140_ch_G0000369;Parent=HG00140_ch_T0001134;transcript_name=HG00140_ch_T0001134;gene_name=ENSG00000295335;ID=exon:HG00140_ch_T0001134:1;Name=ENSG00000295335;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	17247857	17314749	.	-	.	source_gene_common_name=ENSG00000300212;source_gene=ENSG00000300212.1;alternative_source_transcripts=ENST00000770119.1,ENST00000770119.1;gene_id=HG00140_ch_G0000370;gene_biotype=lncRNA;gene_name=ENSG00000300212;gene_sources=liftoff;ID=HG00140_ch_G0000370;Name=ENSG00000300212
HG00140_chrY	CAT	transcript	17247857	17314749	1000	-	.	source_transcript=ENST00000770119.1;source_transcript_name=ENST00000770119;source_gene=ENSG00000300212.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300212.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770119.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300212;alternative_source_transcripts=ENST00000770119.1,ENST00000770119.1;transcript_id=HG00140_ch_T0001135;gene_id=HG00140_ch_G0000370;Parent=HG00140_ch_G0000370;transcript_name=HG00140_ch_T0001135;gene_name=ENSG00000300212;ID=HG00140_ch_T0001135;Name=ENSG00000300212
HG00140_chrY	CAT	exon	17247857	17248554	.	-	.	source_transcript=ENST00000770119.1;source_transcript_name=ENST00000770119;source_gene=ENSG00000300212.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300212.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300212;alternative_source_transcripts=ENST00000770119.1,ENST00000770119.1;transcript_id=HG00140_ch_T0001135;gene_id=HG00140_ch_G0000370;Parent=HG00140_ch_T0001135;transcript_name=HG00140_ch_T0001135;gene_name=ENSG00000300212;ID=exon:HG00140_ch_T0001135:0;Name=ENSG00000300212;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	17248555	17312388	.	-	.	source_transcript=ENST00000770119.1;source_transcript_name=ENST00000770119;source_gene=ENSG00000300212.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300212.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300212;alternative_source_transcripts=ENST00000770119.1,ENST00000770119.1;transcript_id=HG00140_ch_T0001135;gene_id=HG00140_ch_G0000370;Parent=HG00140_ch_T0001135;transcript_name=HG00140_ch_T0001135;gene_name=ENSG00000300212;ID=intron:HG00140_ch_T0001135:0;Name=ENSG00000300212;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	17312389	17312533	.	-	.	source_transcript=ENST00000770119.1;source_transcript_name=ENST00000770119;source_gene=ENSG00000300212.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300212.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300212;alternative_source_transcripts=ENST00000770119.1,ENST00000770119.1;transcript_id=HG00140_ch_T0001135;gene_id=HG00140_ch_G0000370;Parent=HG00140_ch_T0001135;transcript_name=HG00140_ch_T0001135;gene_name=ENSG00000300212;ID=exon:HG00140_ch_T0001135:1;Name=ENSG00000300212;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	17312534	17314074	.	-	.	source_transcript=ENST00000770119.1;source_transcript_name=ENST00000770119;source_gene=ENSG00000300212.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300212.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300212;alternative_source_transcripts=ENST00000770119.1,ENST00000770119.1;transcript_id=HG00140_ch_T0001135;gene_id=HG00140_ch_G0000370;Parent=HG00140_ch_T0001135;transcript_name=HG00140_ch_T0001135;gene_name=ENSG00000300212;ID=intron:HG00140_ch_T0001135:1;Name=ENSG00000300212;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	17314075	17314254	.	-	.	source_transcript=ENST00000770119.1;source_transcript_name=ENST00000770119;source_gene=ENSG00000300212.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300212.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300212;alternative_source_transcripts=ENST00000770119.1,ENST00000770119.1;transcript_id=HG00140_ch_T0001135;gene_id=HG00140_ch_G0000370;Parent=HG00140_ch_T0001135;transcript_name=HG00140_ch_T0001135;gene_name=ENSG00000300212;ID=exon:HG00140_ch_T0001135:2;Name=ENSG00000300212;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	17314255	17314474	.	-	.	source_transcript=ENST00000770119.1;source_transcript_name=ENST00000770119;source_gene=ENSG00000300212.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300212.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300212;alternative_source_transcripts=ENST00000770119.1,ENST00000770119.1;transcript_id=HG00140_ch_T0001135;gene_id=HG00140_ch_G0000370;Parent=HG00140_ch_T0001135;transcript_name=HG00140_ch_T0001135;gene_name=ENSG00000300212;ID=intron:HG00140_ch_T0001135:2;Name=ENSG00000300212;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	17314475	17314749	.	-	.	source_transcript=ENST00000770119.1;source_transcript_name=ENST00000770119;source_gene=ENSG00000300212.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300212.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000770119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000770119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300212;alternative_source_transcripts=ENST00000770119.1,ENST00000770119.1;transcript_id=HG00140_ch_T0001135;gene_id=HG00140_ch_G0000370;Parent=HG00140_ch_T0001135;transcript_name=HG00140_ch_T0001135;gene_name=ENSG00000300212;ID=exon:HG00140_ch_T0001135:3;Name=ENSG00000300212;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	17328199	17328330	.	-	.	source_gene_common_name=ENSG00000252689;source_gene=ENSG00000252689.1;alternative_source_transcripts=ENST00000516880.1,ENST00000516880.1;gene_id=HG00140_ch_G0000371;gene_biotype=snoRNA;gene_name=ENSG00000252689;gene_sources=liftoff;ID=HG00140_ch_G0000371;Name=ENSG00000252689
HG00140_chrY	CAT	transcript	17328199	17328330	1000	-	.	source_transcript=ENST00000516880.1;source_transcript_name=ENST00000516880;source_gene=ENSG00000252689.1;source_gene_biotype=snoRNA;original_gene_id=ENSG00000252689.1;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=ENST00000516880.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516880.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000252689;alternative_source_transcripts=ENST00000516880.1,ENST00000516880.1;transcript_id=HG00140_ch_T0001136;gene_id=HG00140_ch_G0000371;Parent=HG00140_ch_G0000371;transcript_name=HG00140_ch_T0001136;gene_name=ENSG00000252689;ID=HG00140_ch_T0001136;Name=ENSG00000252689
HG00140_chrY	CAT	exon	17328199	17328330	.	-	.	source_transcript=ENST00000516880.1;source_transcript_name=ENST00000516880;source_gene=ENSG00000252689.1;source_gene_biotype=snoRNA;original_gene_id=ENSG00000252689.1;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=ENST00000516880.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516880.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000252689;alternative_source_transcripts=ENST00000516880.1,ENST00000516880.1;transcript_id=HG00140_ch_T0001136;gene_id=HG00140_ch_G0000371;Parent=HG00140_ch_T0001136;transcript_name=HG00140_ch_T0001136;gene_name=ENSG00000252689;ID=exon:HG00140_ch_T0001136:0;Name=ENSG00000252689;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	17376086	17381245	.	+	.	source_gene_common_name=ENSG00000309341;source_gene=ENSG00000309341.1;alternative_source_transcripts=ENST00000840368.1,ENST00000840368.1;gene_id=HG00140_ch_G0000372;gene_biotype=lncRNA;gene_name=ENSG00000309341;gene_sources=liftoff;ID=HG00140_ch_G0000372;Name=ENSG00000309341
HG00140_chrY	CAT	transcript	17376086	17381245	1000	+	.	source_transcript=ENST00000840368.1;source_transcript_name=ENST00000840368;source_gene=ENSG00000309341.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309341.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840368.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309341;alternative_source_transcripts=ENST00000840368.1,ENST00000840368.1;transcript_id=HG00140_ch_T0001137;gene_id=HG00140_ch_G0000372;Parent=HG00140_ch_G0000372;transcript_name=HG00140_ch_T0001137;gene_name=ENSG00000309341;ID=HG00140_ch_T0001137;Name=ENSG00000309341
HG00140_chrY	CAT	exon	17376086	17376241	.	+	.	source_transcript=ENST00000840368.1;source_transcript_name=ENST00000840368;source_gene=ENSG00000309341.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309341.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840368.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309341;alternative_source_transcripts=ENST00000840368.1,ENST00000840368.1;transcript_id=HG00140_ch_T0001137;gene_id=HG00140_ch_G0000372;Parent=HG00140_ch_T0001137;transcript_name=HG00140_ch_T0001137;gene_name=ENSG00000309341;ID=exon:HG00140_ch_T0001137:0;Name=ENSG00000309341;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	17376242	17381070	.	+	.	source_transcript=ENST00000840368.1;source_transcript_name=ENST00000840368;source_gene=ENSG00000309341.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309341.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840368.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309341;alternative_source_transcripts=ENST00000840368.1,ENST00000840368.1;transcript_id=HG00140_ch_T0001137;gene_id=HG00140_ch_G0000372;Parent=HG00140_ch_T0001137;transcript_name=HG00140_ch_T0001137;gene_name=ENSG00000309341;ID=intron:HG00140_ch_T0001137:0;Name=ENSG00000309341;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	17381071	17381245	.	+	.	source_transcript=ENST00000840368.1;source_transcript_name=ENST00000840368;source_gene=ENSG00000309341.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309341.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840368.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309341;alternative_source_transcripts=ENST00000840368.1,ENST00000840368.1;transcript_id=HG00140_ch_T0001137;gene_id=HG00140_ch_G0000372;Parent=HG00140_ch_T0001137;transcript_name=HG00140_ch_T0001137;gene_name=ENSG00000309341;ID=exon:HG00140_ch_T0001137:1;Name=ENSG00000309341;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	17438886	17438992	.	+	.	source_gene_common_name=RNU6-109P;source_gene=ENSG00000252173.1;alternative_source_transcripts=ENST00000516364.1,ENST00000516364.1;gene_id=HG00140_ch_G0000373;gene_biotype=snRNA;gene_name=RNU6-109P;gene_sources=liftoff;ID=HG00140_ch_G0000373;Name=RNU6-109P
HG00140_chrY	CAT	transcript	17438886	17438992	1000	+	.	source_transcript=ENST00000516364.1;source_transcript_name=RNU6-109P-201;source_gene=ENSG00000252173.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252173.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516364.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516364.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-109P;alternative_source_transcripts=ENST00000516364.1,ENST00000516364.1;transcript_id=HG00140_ch_T0001138;gene_id=HG00140_ch_G0000373;Parent=HG00140_ch_G0000373;transcript_name=HG00140_ch_T0001138;gene_name=RNU6-109P;ID=HG00140_ch_T0001138;Name=RNU6-109P
HG00140_chrY	CAT	exon	17438886	17438992	.	+	.	source_transcript=ENST00000516364.1;source_transcript_name=RNU6-109P-201;source_gene=ENSG00000252173.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252173.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516364.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516364.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-109P;alternative_source_transcripts=ENST00000516364.1,ENST00000516364.1;transcript_id=HG00140_ch_T0001138;gene_id=HG00140_ch_G0000373;Parent=HG00140_ch_T0001138;transcript_name=HG00140_ch_T0001138;gene_name=RNU6-109P;ID=exon:HG00140_ch_T0001138:0;Name=RNU6-109P;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	17526239	17526345	.	-	.	source_gene_common_name=RNU6-184P;source_gene=ENSG00000252323.1;alternative_source_transcripts=ENST00000516514.1,ENST00000516514.1;gene_id=HG00140_ch_G0000374;gene_biotype=snRNA;gene_name=RNU6-184P;gene_sources=liftoff;ID=HG00140_ch_G0000374;Name=RNU6-184P
HG00140_chrY	CAT	transcript	17526239	17526345	1000	-	.	source_transcript=ENST00000516514.1;source_transcript_name=RNU6-184P-201;source_gene=ENSG00000252323.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252323.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516514.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516514.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-184P;alternative_source_transcripts=ENST00000516514.1,ENST00000516514.1;transcript_id=HG00140_ch_T0001139;gene_id=HG00140_ch_G0000374;Parent=HG00140_ch_G0000374;transcript_name=HG00140_ch_T0001139;gene_name=RNU6-184P;ID=HG00140_ch_T0001139;Name=RNU6-184P
HG00140_chrY	CAT	exon	17526239	17526345	.	-	.	source_transcript=ENST00000516514.1;source_transcript_name=RNU6-184P-201;source_gene=ENSG00000252323.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252323.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516514.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516514.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-184P;alternative_source_transcripts=ENST00000516514.1,ENST00000516514.1;transcript_id=HG00140_ch_T0001139;gene_id=HG00140_ch_G0000374;Parent=HG00140_ch_T0001139;transcript_name=HG00140_ch_T0001139;gene_name=RNU6-184P;ID=exon:HG00140_ch_T0001139:0;Name=RNU6-184P;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	17583999	17589158	.	-	.	source_gene_common_name=ENSG00000309341;source_gene=ENSG00000309341.1;gene_id=HG00140_ch_G0000375;gene_biotype=lncRNA;gene_name=ENSG00000309341;gene_sources=liftoff;ID=HG00140_ch_G0000375;Name=ENSG00000309341
HG00140_chrY	CAT	transcript	17583999	17589158	1000	-	.	source_transcript=ENST00000840368.1;source_transcript_name=ENST00000840368;source_gene=ENSG00000309341.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309341.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840368.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309341;transcript_id=HG00140_ch_T0001140;gene_id=HG00140_ch_G0000375;Parent=HG00140_ch_G0000375;transcript_name=HG00140_ch_T0001140;gene_name=ENSG00000309341;ID=HG00140_ch_T0001140;Name=ENSG00000309341
HG00140_chrY	CAT	exon	17583999	17584173	.	-	.	source_transcript=ENST00000840368.1;source_transcript_name=ENST00000840368;source_gene=ENSG00000309341.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309341.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840368.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309341;transcript_id=HG00140_ch_T0001140;gene_id=HG00140_ch_G0000375;Parent=HG00140_ch_T0001140;transcript_name=HG00140_ch_T0001140;gene_name=ENSG00000309341;ID=exon:HG00140_ch_T0001140:0;Name=ENSG00000309341;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	17584174	17589002	.	-	.	source_transcript=ENST00000840368.1;source_transcript_name=ENST00000840368;source_gene=ENSG00000309341.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309341.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840368.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309341;transcript_id=HG00140_ch_T0001140;gene_id=HG00140_ch_G0000375;Parent=HG00140_ch_T0001140;transcript_name=HG00140_ch_T0001140;gene_name=ENSG00000309341;ID=intron:HG00140_ch_T0001140:0;Name=ENSG00000309341;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	17589003	17589158	.	-	.	source_transcript=ENST00000840368.1;source_transcript_name=ENST00000840368;source_gene=ENSG00000309341.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000309341.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840368.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840368.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000309341;transcript_id=HG00140_ch_T0001140;gene_id=HG00140_ch_G0000375;Parent=HG00140_ch_T0001140;transcript_name=HG00140_ch_T0001140;gene_name=ENSG00000309341;ID=exon:HG00140_ch_T0001140:1;Name=ENSG00000309341;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	17789707	17834513	.	-	.	source_gene_common_name=ENSG00000286201;source_gene=ENSG00000286201.2;alternative_source_transcripts=ENST00000651678.1,ENST00000651678.1;gene_id=HG00140_ch_G0000376;gene_biotype=lncRNA;gene_name=ENSG00000286201;gene_sources=liftoff;ID=HG00140_ch_G0000376;Name=ENSG00000286201
HG00140_chrY	CAT	transcript	17789707	17834513	1000	-	.	source_transcript=ENST00000651678.1;source_transcript_name=ENST00000651678;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651678.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651678.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000651678.1,ENST00000651678.1;transcript_id=HG00140_ch_T0001141;gene_id=HG00140_ch_G0000376;Parent=HG00140_ch_G0000376;transcript_name=HG00140_ch_T0001141;gene_name=ENSG00000286201;ID=HG00140_ch_T0001141;Name=ENSG00000286201
HG00140_chrY	CAT	exon	17789707	17795820	.	-	.	source_transcript=ENST00000651678.1;source_transcript_name=ENST00000651678;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651678.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651678.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000651678.1,ENST00000651678.1;transcript_id=HG00140_ch_T0001141;gene_id=HG00140_ch_G0000376;Parent=HG00140_ch_T0001141;transcript_name=HG00140_ch_T0001141;gene_name=ENSG00000286201;ID=exon:HG00140_ch_T0001141:0;Name=ENSG00000286201;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	17795821	17818514	.	-	.	source_transcript=ENST00000651678.1;source_transcript_name=ENST00000651678;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651678.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651678.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000651678.1,ENST00000651678.1;transcript_id=HG00140_ch_T0001141;gene_id=HG00140_ch_G0000376;Parent=HG00140_ch_T0001141;transcript_name=HG00140_ch_T0001141;gene_name=ENSG00000286201;ID=intron:HG00140_ch_T0001141:0;Name=ENSG00000286201;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	17818515	17818557	.	-	.	source_transcript=ENST00000651678.1;source_transcript_name=ENST00000651678;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651678.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651678.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000651678.1,ENST00000651678.1;transcript_id=HG00140_ch_T0001141;gene_id=HG00140_ch_G0000376;Parent=HG00140_ch_T0001141;transcript_name=HG00140_ch_T0001141;gene_name=ENSG00000286201;ID=exon:HG00140_ch_T0001141:1;Name=ENSG00000286201;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	17818558	17834017	.	-	.	source_transcript=ENST00000651678.1;source_transcript_name=ENST00000651678;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651678.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651678.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000651678.1,ENST00000651678.1;transcript_id=HG00140_ch_T0001141;gene_id=HG00140_ch_G0000376;Parent=HG00140_ch_T0001141;transcript_name=HG00140_ch_T0001141;gene_name=ENSG00000286201;ID=intron:HG00140_ch_T0001141:1;Name=ENSG00000286201;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	17834018	17834513	.	-	.	source_transcript=ENST00000651678.1;source_transcript_name=ENST00000651678;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651678.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651678.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000651678.1,ENST00000651678.1;transcript_id=HG00140_ch_T0001141;gene_id=HG00140_ch_G0000376;Parent=HG00140_ch_T0001141;transcript_name=HG00140_ch_T0001141;gene_name=ENSG00000286201;ID=exon:HG00140_ch_T0001141:2;Name=ENSG00000286201;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	17791116	17818664	1000	-	.	source_transcript=ENST00000835478.1;source_transcript_name=ENST00000835478;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000835478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000835478.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000835478.1,ENST00000835478.1;transcript_id=HG00140_ch_T0001142;gene_id=HG00140_ch_G0000376;Parent=HG00140_ch_G0000376;transcript_name=HG00140_ch_T0001142;gene_name=ENSG00000286201;ID=HG00140_ch_T0001142;Name=ENSG00000286201
HG00140_chrY	CAT	exon	17791116	17791561	.	-	.	source_transcript=ENST00000835478.1;source_transcript_name=ENST00000835478;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000835478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000835478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000835478.1,ENST00000835478.1;transcript_id=HG00140_ch_T0001142;gene_id=HG00140_ch_G0000376;Parent=HG00140_ch_T0001142;transcript_name=HG00140_ch_T0001142;gene_name=ENSG00000286201;ID=exon:HG00140_ch_T0001142:0;Name=ENSG00000286201;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	17791562	17795703	.	-	.	source_transcript=ENST00000835478.1;source_transcript_name=ENST00000835478;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000835478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000835478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000835478.1,ENST00000835478.1;transcript_id=HG00140_ch_T0001142;gene_id=HG00140_ch_G0000376;Parent=HG00140_ch_T0001142;transcript_name=HG00140_ch_T0001142;gene_name=ENSG00000286201;ID=intron:HG00140_ch_T0001142:0;Name=ENSG00000286201;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	17795704	17795820	.	-	.	source_transcript=ENST00000835478.1;source_transcript_name=ENST00000835478;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000835478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000835478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000835478.1,ENST00000835478.1;transcript_id=HG00140_ch_T0001142;gene_id=HG00140_ch_G0000376;Parent=HG00140_ch_T0001142;transcript_name=HG00140_ch_T0001142;gene_name=ENSG00000286201;ID=exon:HG00140_ch_T0001142:1;Name=ENSG00000286201;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	17795821	17809447	.	-	.	source_transcript=ENST00000835478.1;source_transcript_name=ENST00000835478;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000835478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000835478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000835478.1,ENST00000835478.1;transcript_id=HG00140_ch_T0001142;gene_id=HG00140_ch_G0000376;Parent=HG00140_ch_T0001142;transcript_name=HG00140_ch_T0001142;gene_name=ENSG00000286201;ID=intron:HG00140_ch_T0001142:1;Name=ENSG00000286201;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	17809448	17809539	.	-	.	source_transcript=ENST00000835478.1;source_transcript_name=ENST00000835478;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000835478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000835478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000835478.1,ENST00000835478.1;transcript_id=HG00140_ch_T0001142;gene_id=HG00140_ch_G0000376;Parent=HG00140_ch_T0001142;transcript_name=HG00140_ch_T0001142;gene_name=ENSG00000286201;ID=exon:HG00140_ch_T0001142:2;Name=ENSG00000286201;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	17809540	17818514	.	-	.	source_transcript=ENST00000835478.1;source_transcript_name=ENST00000835478;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000835478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000835478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000835478.1,ENST00000835478.1;transcript_id=HG00140_ch_T0001142;gene_id=HG00140_ch_G0000376;Parent=HG00140_ch_T0001142;transcript_name=HG00140_ch_T0001142;gene_name=ENSG00000286201;ID=intron:HG00140_ch_T0001142:2;Name=ENSG00000286201;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	17818515	17818664	.	-	.	source_transcript=ENST00000835478.1;source_transcript_name=ENST00000835478;source_gene=ENSG00000286201.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286201.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000835478.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000835478.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286201;alternative_source_transcripts=ENST00000835478.1,ENST00000835478.1;transcript_id=HG00140_ch_T0001142;gene_id=HG00140_ch_G0000376;Parent=HG00140_ch_T0001142;transcript_name=HG00140_ch_T0001142;gene_name=ENSG00000286201;ID=exon:HG00140_ch_T0001142:3;Name=ENSG00000286201;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	18382771	18383597	.	+	.	source_gene_common_name=SURF6P1;source_gene=ENSG00000228518.1;alternative_source_transcripts=ENST00000451854.1,ENST00000451854.1;gene_id=HG00140_ch_G0000377;gene_biotype=processed_pseudogene;gene_name=SURF6P1;gene_sources=liftoff;ID=HG00140_ch_G0000377;Name=SURF6P1
HG00140_chrY	CAT	transcript	18382771	18383597	1000	+	.	source_transcript=ENST00000451854.1;source_transcript_name=SURF6P1-201;source_gene=ENSG00000228518.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228518.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000451854.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451854.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SURF6P1;alternative_source_transcripts=ENST00000451854.1,ENST00000451854.1;transcript_id=HG00140_ch_T0001143;gene_id=HG00140_ch_G0000377;Parent=HG00140_ch_G0000377;transcript_name=HG00140_ch_T0001143;gene_name=SURF6P1;ID=HG00140_ch_T0001143;Name=SURF6P1
HG00140_chrY	CAT	exon	18382771	18383597	.	+	.	source_transcript=ENST00000451854.1;source_transcript_name=SURF6P1-201;source_gene=ENSG00000228518.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228518.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000451854.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451854.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SURF6P1;alternative_source_transcripts=ENST00000451854.1,ENST00000451854.1;transcript_id=HG00140_ch_T0001143;gene_id=HG00140_ch_G0000377;Parent=HG00140_ch_T0001143;transcript_name=HG00140_ch_T0001143;gene_name=SURF6P1;ID=exon:HG00140_ch_T0001143:0;Name=SURF6P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	18654750	18655085	.	-	.	source_gene_common_name=ELOCP35;source_gene=ENSG00000271595.1;alternative_source_transcripts=ENST00000604289.1,ENST00000604289.1;gene_id=HG00140_ch_G0000378;gene_biotype=processed_pseudogene;gene_name=ELOCP35;gene_sources=liftoff;ID=HG00140_ch_G0000378;Name=ELOCP35
HG00140_chrY	CAT	transcript	18654750	18655085	1000	-	.	source_transcript=ENST00000604289.1;source_transcript_name=ELOCP35-201;source_gene=ENSG00000271595.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271595.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604289.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP35;alternative_source_transcripts=ENST00000604289.1,ENST00000604289.1;transcript_id=HG00140_ch_T0001144;gene_id=HG00140_ch_G0000378;Parent=HG00140_ch_G0000378;transcript_name=HG00140_ch_T0001144;gene_name=ELOCP35;ID=HG00140_ch_T0001144;Name=ELOCP35
HG00140_chrY	CAT	exon	18654750	18655085	.	-	.	source_transcript=ENST00000604289.1;source_transcript_name=ELOCP35-201;source_gene=ENSG00000271595.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271595.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604289.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP35;alternative_source_transcripts=ENST00000604289.1,ENST00000604289.1;transcript_id=HG00140_ch_T0001144;gene_id=HG00140_ch_G0000378;Parent=HG00140_ch_T0001144;transcript_name=HG00140_ch_T0001144;gene_name=ELOCP35;ID=exon:HG00140_ch_T0001144:0;Name=ELOCP35;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	18690831	18707034	.	+	.	source_gene_common_name=FAM41AY2;source_gene=ENSG00000290726.3;gene_id=HG00140_ch_G0000379;gene_biotype=lncRNA;gene_name=FAM41AY2;gene_sources=liftoff;ID=HG00140_ch_G0000379;Name=FAM41AY2
HG00140_chrY	CAT	transcript	18690831	18704883	1000	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG00140_ch_T0001145;gene_id=HG00140_ch_G0000379;Parent=HG00140_ch_G0000379;transcript_name=HG00140_ch_T0001145;gene_name=FAM41AY2;ID=HG00140_ch_T0001145;Name=FAM41AY2
HG00140_chrY	CAT	exon	18690831	18690988	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG00140_ch_T0001145;gene_id=HG00140_ch_G0000379;Parent=HG00140_ch_T0001145;transcript_name=HG00140_ch_T0001145;gene_name=FAM41AY2;ID=exon:HG00140_ch_T0001145:0;Name=FAM41AY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18690989	18691583	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG00140_ch_T0001145;gene_id=HG00140_ch_G0000379;Parent=HG00140_ch_T0001145;transcript_name=HG00140_ch_T0001145;gene_name=FAM41AY2;ID=intron:HG00140_ch_T0001145:0;Name=FAM41AY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18691584	18691633	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG00140_ch_T0001145;gene_id=HG00140_ch_G0000379;Parent=HG00140_ch_T0001145;transcript_name=HG00140_ch_T0001145;gene_name=FAM41AY2;ID=exon:HG00140_ch_T0001145:1;Name=FAM41AY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18691634	18702962	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG00140_ch_T0001145;gene_id=HG00140_ch_G0000379;Parent=HG00140_ch_T0001145;transcript_name=HG00140_ch_T0001145;gene_name=FAM41AY2;ID=intron:HG00140_ch_T0001145:1;Name=FAM41AY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18702963	18703091	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG00140_ch_T0001145;gene_id=HG00140_ch_G0000379;Parent=HG00140_ch_T0001145;transcript_name=HG00140_ch_T0001145;gene_name=FAM41AY2;ID=exon:HG00140_ch_T0001145:2;Name=FAM41AY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18703092	18703338	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG00140_ch_T0001145;gene_id=HG00140_ch_G0000379;Parent=HG00140_ch_T0001145;transcript_name=HG00140_ch_T0001145;gene_name=FAM41AY2;ID=intron:HG00140_ch_T0001145:2;Name=FAM41AY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18703339	18703432	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG00140_ch_T0001145;gene_id=HG00140_ch_G0000379;Parent=HG00140_ch_T0001145;transcript_name=HG00140_ch_T0001145;gene_name=FAM41AY2;ID=exon:HG00140_ch_T0001145:3;Name=FAM41AY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18703433	18704025	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG00140_ch_T0001145;gene_id=HG00140_ch_G0000379;Parent=HG00140_ch_T0001145;transcript_name=HG00140_ch_T0001145;gene_name=FAM41AY2;ID=intron:HG00140_ch_T0001145:3;Name=FAM41AY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18704026	18704196	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG00140_ch_T0001145;gene_id=HG00140_ch_G0000379;Parent=HG00140_ch_T0001145;transcript_name=HG00140_ch_T0001145;gene_name=FAM41AY2;ID=exon:HG00140_ch_T0001145:4;Name=FAM41AY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18704197	18704305	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG00140_ch_T0001145;gene_id=HG00140_ch_G0000379;Parent=HG00140_ch_T0001145;transcript_name=HG00140_ch_T0001145;gene_name=FAM41AY2;ID=intron:HG00140_ch_T0001145:4;Name=FAM41AY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18704306	18704399	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG00140_ch_T0001145;gene_id=HG00140_ch_G0000379;Parent=HG00140_ch_T0001145;transcript_name=HG00140_ch_T0001145;gene_name=FAM41AY2;ID=exon:HG00140_ch_T0001145:5;Name=FAM41AY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18704400	18704673	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG00140_ch_T0001145;gene_id=HG00140_ch_G0000379;Parent=HG00140_ch_T0001145;transcript_name=HG00140_ch_T0001145;gene_name=FAM41AY2;ID=intron:HG00140_ch_T0001145:5;Name=FAM41AY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18704674	18704883	.	+	.	source_transcript=ENST00000641637.2;source_transcript_name=FAM41AY2-201;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000641637.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000641637.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG00140_ch_T0001145;gene_id=HG00140_ch_G0000379;Parent=HG00140_ch_T0001145;transcript_name=HG00140_ch_T0001145;gene_name=FAM41AY2;ID=exon:HG00140_ch_T0001145:6;Name=FAM41AY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	18704753	18707034	1000	+	.	source_transcript=ENST00000794388.1;source_transcript_name=FAM41AY2-202;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794388.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794388.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG00140_ch_T0001147;gene_id=HG00140_ch_G0000379;Parent=HG00140_ch_G0000379;transcript_name=HG00140_ch_T0001147;gene_name=FAM41AY2;ID=HG00140_ch_T0001147;Name=FAM41AY2
HG00140_chrY	CAT	exon	18704753	18704883	.	+	.	source_transcript=ENST00000794388.1;source_transcript_name=FAM41AY2-202;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794388.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794388.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG00140_ch_T0001147;gene_id=HG00140_ch_G0000379;Parent=HG00140_ch_T0001147;transcript_name=HG00140_ch_T0001147;gene_name=FAM41AY2;ID=exon:HG00140_ch_T0001147:0;Name=FAM41AY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18704884	18705576	.	+	.	source_transcript=ENST00000794388.1;source_transcript_name=FAM41AY2-202;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794388.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794388.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG00140_ch_T0001147;gene_id=HG00140_ch_G0000379;Parent=HG00140_ch_T0001147;transcript_name=HG00140_ch_T0001147;gene_name=FAM41AY2;ID=intron:HG00140_ch_T0001147:0;Name=FAM41AY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18705577	18705798	.	+	.	source_transcript=ENST00000794388.1;source_transcript_name=FAM41AY2-202;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794388.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794388.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG00140_ch_T0001147;gene_id=HG00140_ch_G0000379;Parent=HG00140_ch_T0001147;transcript_name=HG00140_ch_T0001147;gene_name=FAM41AY2;ID=exon:HG00140_ch_T0001147:1;Name=FAM41AY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18705799	18705880	.	+	.	source_transcript=ENST00000794388.1;source_transcript_name=FAM41AY2-202;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794388.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794388.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG00140_ch_T0001147;gene_id=HG00140_ch_G0000379;Parent=HG00140_ch_T0001147;transcript_name=HG00140_ch_T0001147;gene_name=FAM41AY2;ID=intron:HG00140_ch_T0001147:1;Name=FAM41AY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18705881	18707034	.	+	.	source_transcript=ENST00000794388.1;source_transcript_name=FAM41AY2-202;source_gene=ENSG00000290726.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290726.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000794388.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000794388.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;transcript_id=HG00140_ch_T0001147;gene_id=HG00140_ch_G0000379;Parent=HG00140_ch_T0001147;transcript_name=HG00140_ch_T0001147;gene_name=FAM41AY2;ID=exon:HG00140_ch_T0001147:2;Name=FAM41AY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	18704367	18706580	.	+	.	source_gene_common_name=ENSG00000282909;source_gene=ENSG00000282909.3;gene_id=HG00140_ch_G0000380;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000282909;gene_sources=liftoff;ID=HG00140_ch_G0000380;Name=ENSG00000282909
HG00140_chrY	CAT	transcript	18704367	18706580	1000	+	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG00140_ch_T0001146;gene_id=HG00140_ch_G0000380;Parent=HG00140_ch_G0000380;transcript_name=HG00140_ch_T0001146;gene_name=ENSG00000282909;ID=HG00140_ch_T0001146;Name=ENSG00000282909
HG00140_chrY	CAT	exon	18704367	18704575	.	+	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG00140_ch_T0001146;gene_id=HG00140_ch_G0000380;Parent=HG00140_ch_T0001146;transcript_name=HG00140_ch_T0001146;gene_name=ENSG00000282909;ID=exon:HG00140_ch_T0001146:0;Name=ENSG00000282909;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18704576	18704618	.	+	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG00140_ch_T0001146;gene_id=HG00140_ch_G0000380;Parent=HG00140_ch_T0001146;transcript_name=HG00140_ch_T0001146;gene_name=ENSG00000282909;ID=intron:HG00140_ch_T0001146:0;Name=ENSG00000282909;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18704619	18704883	.	+	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG00140_ch_T0001146;gene_id=HG00140_ch_G0000380;Parent=HG00140_ch_T0001146;transcript_name=HG00140_ch_T0001146;gene_name=ENSG00000282909;ID=exon:HG00140_ch_T0001146:1;Name=ENSG00000282909;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18704884	18704972	.	+	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG00140_ch_T0001146;gene_id=HG00140_ch_G0000380;Parent=HG00140_ch_T0001146;transcript_name=HG00140_ch_T0001146;gene_name=ENSG00000282909;ID=intron:HG00140_ch_T0001146:1;Name=ENSG00000282909;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18704973	18705092	.	+	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG00140_ch_T0001146;gene_id=HG00140_ch_G0000380;Parent=HG00140_ch_T0001146;transcript_name=HG00140_ch_T0001146;gene_name=ENSG00000282909;ID=exon:HG00140_ch_T0001146:2;Name=ENSG00000282909;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18705093	18705417	.	+	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG00140_ch_T0001146;gene_id=HG00140_ch_G0000380;Parent=HG00140_ch_T0001146;transcript_name=HG00140_ch_T0001146;gene_name=ENSG00000282909;ID=intron:HG00140_ch_T0001146:2;Name=ENSG00000282909;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18705418	18705512	.	+	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG00140_ch_T0001146;gene_id=HG00140_ch_G0000380;Parent=HG00140_ch_T0001146;transcript_name=HG00140_ch_T0001146;gene_name=ENSG00000282909;ID=exon:HG00140_ch_T0001146:3;Name=ENSG00000282909;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18705513	18705880	.	+	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG00140_ch_T0001146;gene_id=HG00140_ch_G0000380;Parent=HG00140_ch_T0001146;transcript_name=HG00140_ch_T0001146;gene_name=ENSG00000282909;ID=intron:HG00140_ch_T0001146:3;Name=ENSG00000282909;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18705881	18705997	.	+	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG00140_ch_T0001146;gene_id=HG00140_ch_G0000380;Parent=HG00140_ch_T0001146;transcript_name=HG00140_ch_T0001146;gene_name=ENSG00000282909;ID=exon:HG00140_ch_T0001146:4;Name=ENSG00000282909;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18705998	18706453	.	+	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG00140_ch_T0001146;gene_id=HG00140_ch_G0000380;Parent=HG00140_ch_T0001146;transcript_name=HG00140_ch_T0001146;gene_name=ENSG00000282909;ID=intron:HG00140_ch_T0001146:4;Name=ENSG00000282909;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18706454	18706580	.	+	.	source_transcript=ENST00000634531.1;source_transcript_name=ENST00000634531;source_gene=ENSG00000282909.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000282909.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000634531.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000634531.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000282909;transcript_id=HG00140_ch_T0001146;gene_id=HG00140_ch_G0000380;Parent=HG00140_ch_T0001146;transcript_name=HG00140_ch_T0001146;gene_name=ENSG00000282909;ID=exon:HG00140_ch_T0001146:5;Name=ENSG00000282909;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	18706701	18708903	.	-	.	source_gene_common_name=TUBB1P2;source_gene=ENSG00000228578.1;alternative_source_transcripts=ENST00000422712.1;gene_id=HG00140_ch_G0000381;gene_biotype=unprocessed_pseudogene;gene_name=TUBB1P2;gene_sources=liftoff,transMap;ID=HG00140_ch_G0000381;Name=TUBB1P2
HG00140_chrY	CAT	transcript	18706701	18708903	1000	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=transMap;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;alternative_source_transcripts=ENST00000422712.1;transcript_id=HG00140_ch_T0001148;gene_id=HG00140_ch_G0000381;Parent=HG00140_ch_G0000381;transcript_name=HG00140_ch_T0001148;gene_name=TUBB1P2;ID=HG00140_ch_T0001148;Name=TUBB1P2
HG00140_chrY	CAT	exon	18706701	18707749	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=transMap;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;alternative_source_transcripts=ENST00000422712.1;transcript_id=HG00140_ch_T0001148;gene_id=HG00140_ch_G0000381;Parent=HG00140_ch_T0001148;transcript_name=HG00140_ch_T0001148;gene_name=TUBB1P2;ID=exon:HG00140_ch_T0001148:0;Name=TUBB1P2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18707750	18708261	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=transMap;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;alternative_source_transcripts=ENST00000422712.1;transcript_id=HG00140_ch_T0001148;gene_id=HG00140_ch_G0000381;Parent=HG00140_ch_T0001148;transcript_name=HG00140_ch_T0001148;gene_name=TUBB1P2;ID=intron:HG00140_ch_T0001148:0;Name=TUBB1P2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18708262	18708541	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=transMap;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;alternative_source_transcripts=ENST00000422712.1;transcript_id=HG00140_ch_T0001148;gene_id=HG00140_ch_G0000381;Parent=HG00140_ch_T0001148;transcript_name=HG00140_ch_T0001148;gene_name=TUBB1P2;ID=exon:HG00140_ch_T0001148:1;Name=TUBB1P2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18708542	18708846	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=transMap;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;alternative_source_transcripts=ENST00000422712.1;transcript_id=HG00140_ch_T0001148;gene_id=HG00140_ch_G0000381;Parent=HG00140_ch_T0001148;transcript_name=HG00140_ch_T0001148;gene_name=TUBB1P2;ID=intron:HG00140_ch_T0001148:1;Name=TUBB1P2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18708847	18708903	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=transMap;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;alternative_source_transcripts=ENST00000422712.1;transcript_id=HG00140_ch_T0001148;gene_id=HG00140_ch_G0000381;Parent=HG00140_ch_T0001148;transcript_name=HG00140_ch_T0001148;gene_name=TUBB1P2;ID=exon:HG00140_ch_T0001148:2;Name=TUBB1P2;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	18706701	18708903	1000	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=HG00140_ch_T0001149;gene_id=HG00140_ch_G0000381;Parent=HG00140_ch_G0000381;transcript_name=HG00140_ch_T0001149;gene_name=TUBB1P2;ID=HG00140_ch_T0001149;Name=TUBB1P2
HG00140_chrY	CAT	exon	18706701	18707749	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=HG00140_ch_T0001149;gene_id=HG00140_ch_G0000381;Parent=HG00140_ch_T0001149;transcript_name=HG00140_ch_T0001149;gene_name=TUBB1P2;ID=exon:HG00140_ch_T0001149:0;Name=TUBB1P2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18707750	18708261	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=HG00140_ch_T0001149;gene_id=HG00140_ch_G0000381;Parent=HG00140_ch_T0001149;transcript_name=HG00140_ch_T0001149;gene_name=TUBB1P2;ID=intron:HG00140_ch_T0001149:0;Name=TUBB1P2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18708262	18708352	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=HG00140_ch_T0001149;gene_id=HG00140_ch_G0000381;Parent=HG00140_ch_T0001149;transcript_name=HG00140_ch_T0001149;gene_name=TUBB1P2;ID=exon:HG00140_ch_T0001149:1;Name=TUBB1P2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18708353	18708432	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=HG00140_ch_T0001149;gene_id=HG00140_ch_G0000381;Parent=HG00140_ch_T0001149;transcript_name=HG00140_ch_T0001149;gene_name=TUBB1P2;ID=intron:HG00140_ch_T0001149:1;Name=TUBB1P2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18708433	18708541	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=HG00140_ch_T0001149;gene_id=HG00140_ch_G0000381;Parent=HG00140_ch_T0001149;transcript_name=HG00140_ch_T0001149;gene_name=TUBB1P2;ID=exon:HG00140_ch_T0001149:2;Name=TUBB1P2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18708542	18708846	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=HG00140_ch_T0001149;gene_id=HG00140_ch_G0000381;Parent=HG00140_ch_T0001149;transcript_name=HG00140_ch_T0001149;gene_name=TUBB1P2;ID=intron:HG00140_ch_T0001149:2;Name=TUBB1P2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18708847	18708903	.	-	.	source_transcript=ENST00000422712.1;source_transcript_name=TUBB1P2-201;source_gene=ENSG00000228578.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228578.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000422712.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422712.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P2;transcript_id=HG00140_ch_T0001149;gene_id=HG00140_ch_G0000381;Parent=HG00140_ch_T0001149;transcript_name=HG00140_ch_T0001149;gene_name=TUBB1P2;ID=exon:HG00140_ch_T0001149:3;Name=TUBB1P2;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	18741952	18769833	.	-	.	source_gene_common_name=FAM224B;source_gene=ENSG00000230663.2;alternative_source_transcripts=ENST00000729283.1;gene_id=HG00140_ch_G0000382;gene_biotype=lncRNA;gene_name=FAM224B;gene_sources=liftoff;ID=HG00140_ch_G0000382;Name=FAM224B
HG00140_chrY	CAT	transcript	18741952	18769738	1000	-	.	source_transcript=ENST00000729283.1;source_transcript_name=FAM224B-202;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729283.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729283.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729283.1;transcript_id=HG00140_ch_T0001150;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_G0000382;transcript_name=HG00140_ch_T0001150;gene_name=FAM224B;ID=HG00140_ch_T0001150;Name=FAM224B
HG00140_chrY	CAT	exon	18741952	18742262	.	-	.	source_transcript=ENST00000729283.1;source_transcript_name=FAM224B-202;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729283.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729283.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729283.1;transcript_id=HG00140_ch_T0001150;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001150;transcript_name=HG00140_ch_T0001150;gene_name=FAM224B;ID=exon:HG00140_ch_T0001150:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18742263	18766570	.	-	.	source_transcript=ENST00000729283.1;source_transcript_name=FAM224B-202;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729283.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729283.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729283.1;transcript_id=HG00140_ch_T0001150;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001150;transcript_name=HG00140_ch_T0001150;gene_name=FAM224B;ID=intron:HG00140_ch_T0001150:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18766571	18766688	.	-	.	source_transcript=ENST00000729283.1;source_transcript_name=FAM224B-202;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729283.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729283.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729283.1;transcript_id=HG00140_ch_T0001150;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001150;transcript_name=HG00140_ch_T0001150;gene_name=FAM224B;ID=exon:HG00140_ch_T0001150:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18766689	18769188	.	-	.	source_transcript=ENST00000729283.1;source_transcript_name=FAM224B-202;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729283.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729283.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729283.1;transcript_id=HG00140_ch_T0001150;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001150;transcript_name=HG00140_ch_T0001150;gene_name=FAM224B;ID=intron:HG00140_ch_T0001150:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18769189	18769738	.	-	.	source_transcript=ENST00000729283.1;source_transcript_name=FAM224B-202;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729283.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729283.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729283.1;transcript_id=HG00140_ch_T0001150;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001150;transcript_name=HG00140_ch_T0001150;gene_name=FAM224B;ID=exon:HG00140_ch_T0001150:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	18742667	18769627	1000	-	.	source_transcript=ENST00000458667.1;source_transcript_name=FAM224B-201;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458667.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000458667.1;transcript_id=HG00140_ch_T0001151;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_G0000382;transcript_name=HG00140_ch_T0001151;gene_name=FAM224B;ID=HG00140_ch_T0001151;Name=FAM224B
HG00140_chrY	CAT	exon	18742667	18743821	.	-	.	source_transcript=ENST00000458667.1;source_transcript_name=FAM224B-201;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458667.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000458667.1;transcript_id=HG00140_ch_T0001151;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001151;transcript_name=HG00140_ch_T0001151;gene_name=FAM224B;ID=exon:HG00140_ch_T0001151:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18743822	18743908	.	-	.	source_transcript=ENST00000458667.1;source_transcript_name=FAM224B-201;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458667.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000458667.1;transcript_id=HG00140_ch_T0001151;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001151;transcript_name=HG00140_ch_T0001151;gene_name=FAM224B;ID=intron:HG00140_ch_T0001151:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18743909	18743993	.	-	.	source_transcript=ENST00000458667.1;source_transcript_name=FAM224B-201;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458667.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000458667.1;transcript_id=HG00140_ch_T0001151;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001151;transcript_name=HG00140_ch_T0001151;gene_name=FAM224B;ID=exon:HG00140_ch_T0001151:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18743994	18745642	.	-	.	source_transcript=ENST00000458667.1;source_transcript_name=FAM224B-201;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458667.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000458667.1;transcript_id=HG00140_ch_T0001151;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001151;transcript_name=HG00140_ch_T0001151;gene_name=FAM224B;ID=intron:HG00140_ch_T0001151:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18745643	18745877	.	-	.	source_transcript=ENST00000458667.1;source_transcript_name=FAM224B-201;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458667.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000458667.1;transcript_id=HG00140_ch_T0001151;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001151;transcript_name=HG00140_ch_T0001151;gene_name=FAM224B;ID=exon:HG00140_ch_T0001151:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18745878	18766570	.	-	.	source_transcript=ENST00000458667.1;source_transcript_name=FAM224B-201;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458667.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000458667.1;transcript_id=HG00140_ch_T0001151;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001151;transcript_name=HG00140_ch_T0001151;gene_name=FAM224B;ID=intron:HG00140_ch_T0001151:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18766571	18766688	.	-	.	source_transcript=ENST00000458667.1;source_transcript_name=FAM224B-201;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458667.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000458667.1;transcript_id=HG00140_ch_T0001151;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001151;transcript_name=HG00140_ch_T0001151;gene_name=FAM224B;ID=exon:HG00140_ch_T0001151:3;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18766689	18769188	.	-	.	source_transcript=ENST00000458667.1;source_transcript_name=FAM224B-201;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458667.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000458667.1;transcript_id=HG00140_ch_T0001151;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001151;transcript_name=HG00140_ch_T0001151;gene_name=FAM224B;ID=intron:HG00140_ch_T0001151:3;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18769189	18769627	.	-	.	source_transcript=ENST00000458667.1;source_transcript_name=FAM224B-201;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458667.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458667.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000458667.1;transcript_id=HG00140_ch_T0001151;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001151;transcript_name=HG00140_ch_T0001151;gene_name=FAM224B;ID=exon:HG00140_ch_T0001151:4;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	18742667	18769735	1000	-	.	source_transcript=ENST00000729284.1;source_transcript_name=FAM224B-203;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729284.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729284.1;transcript_id=HG00140_ch_T0001152;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_G0000382;transcript_name=HG00140_ch_T0001152;gene_name=FAM224B;ID=HG00140_ch_T0001152;Name=FAM224B
HG00140_chrY	CAT	exon	18742667	18743821	.	-	.	source_transcript=ENST00000729284.1;source_transcript_name=FAM224B-203;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729284.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729284.1;transcript_id=HG00140_ch_T0001152;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001152;transcript_name=HG00140_ch_T0001152;gene_name=FAM224B;ID=exon:HG00140_ch_T0001152:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18743822	18743908	.	-	.	source_transcript=ENST00000729284.1;source_transcript_name=FAM224B-203;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729284.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729284.1;transcript_id=HG00140_ch_T0001152;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001152;transcript_name=HG00140_ch_T0001152;gene_name=FAM224B;ID=intron:HG00140_ch_T0001152:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18743909	18743993	.	-	.	source_transcript=ENST00000729284.1;source_transcript_name=FAM224B-203;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729284.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729284.1;transcript_id=HG00140_ch_T0001152;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001152;transcript_name=HG00140_ch_T0001152;gene_name=FAM224B;ID=exon:HG00140_ch_T0001152:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18743994	18766570	.	-	.	source_transcript=ENST00000729284.1;source_transcript_name=FAM224B-203;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729284.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729284.1;transcript_id=HG00140_ch_T0001152;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001152;transcript_name=HG00140_ch_T0001152;gene_name=FAM224B;ID=intron:HG00140_ch_T0001152:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18766571	18766688	.	-	.	source_transcript=ENST00000729284.1;source_transcript_name=FAM224B-203;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729284.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729284.1;transcript_id=HG00140_ch_T0001152;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001152;transcript_name=HG00140_ch_T0001152;gene_name=FAM224B;ID=exon:HG00140_ch_T0001152:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18766689	18769188	.	-	.	source_transcript=ENST00000729284.1;source_transcript_name=FAM224B-203;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729284.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729284.1;transcript_id=HG00140_ch_T0001152;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001152;transcript_name=HG00140_ch_T0001152;gene_name=FAM224B;ID=intron:HG00140_ch_T0001152:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18769189	18769735	.	-	.	source_transcript=ENST00000729284.1;source_transcript_name=FAM224B-203;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729284.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729284.1;transcript_id=HG00140_ch_T0001152;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001152;transcript_name=HG00140_ch_T0001152;gene_name=FAM224B;ID=exon:HG00140_ch_T0001152:3;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	18742670	18769711	1000	-	.	source_transcript=ENST00000729285.1;source_transcript_name=FAM224B-204;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729285.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729285.1;transcript_id=HG00140_ch_T0001153;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_G0000382;transcript_name=HG00140_ch_T0001153;gene_name=FAM224B;ID=HG00140_ch_T0001153;Name=FAM224B
HG00140_chrY	CAT	exon	18742670	18743821	.	-	.	source_transcript=ENST00000729285.1;source_transcript_name=FAM224B-204;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729285.1;transcript_id=HG00140_ch_T0001153;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001153;transcript_name=HG00140_ch_T0001153;gene_name=FAM224B;ID=exon:HG00140_ch_T0001153:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18743822	18743908	.	-	.	source_transcript=ENST00000729285.1;source_transcript_name=FAM224B-204;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729285.1;transcript_id=HG00140_ch_T0001153;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001153;transcript_name=HG00140_ch_T0001153;gene_name=FAM224B;ID=intron:HG00140_ch_T0001153:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18743909	18743993	.	-	.	source_transcript=ENST00000729285.1;source_transcript_name=FAM224B-204;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729285.1;transcript_id=HG00140_ch_T0001153;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001153;transcript_name=HG00140_ch_T0001153;gene_name=FAM224B;ID=exon:HG00140_ch_T0001153:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18743994	18765105	.	-	.	source_transcript=ENST00000729285.1;source_transcript_name=FAM224B-204;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729285.1;transcript_id=HG00140_ch_T0001153;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001153;transcript_name=HG00140_ch_T0001153;gene_name=FAM224B;ID=intron:HG00140_ch_T0001153:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18765106	18765235	.	-	.	source_transcript=ENST00000729285.1;source_transcript_name=FAM224B-204;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729285.1;transcript_id=HG00140_ch_T0001153;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001153;transcript_name=HG00140_ch_T0001153;gene_name=FAM224B;ID=exon:HG00140_ch_T0001153:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18765236	18766570	.	-	.	source_transcript=ENST00000729285.1;source_transcript_name=FAM224B-204;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729285.1;transcript_id=HG00140_ch_T0001153;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001153;transcript_name=HG00140_ch_T0001153;gene_name=FAM224B;ID=intron:HG00140_ch_T0001153:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18766571	18766688	.	-	.	source_transcript=ENST00000729285.1;source_transcript_name=FAM224B-204;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729285.1;transcript_id=HG00140_ch_T0001153;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001153;transcript_name=HG00140_ch_T0001153;gene_name=FAM224B;ID=exon:HG00140_ch_T0001153:3;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18766689	18769188	.	-	.	source_transcript=ENST00000729285.1;source_transcript_name=FAM224B-204;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729285.1;transcript_id=HG00140_ch_T0001153;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001153;transcript_name=HG00140_ch_T0001153;gene_name=FAM224B;ID=intron:HG00140_ch_T0001153:3;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18769189	18769711	.	-	.	source_transcript=ENST00000729285.1;source_transcript_name=FAM224B-204;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729285.1;transcript_id=HG00140_ch_T0001153;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001153;transcript_name=HG00140_ch_T0001153;gene_name=FAM224B;ID=exon:HG00140_ch_T0001153:4;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	18743149	18769706	1000	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG00140_ch_T0001154;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_G0000382;transcript_name=HG00140_ch_T0001154;gene_name=FAM224B;ID=HG00140_ch_T0001154;Name=FAM224B
HG00140_chrY	CAT	exon	18743149	18743821	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG00140_ch_T0001154;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001154;transcript_name=HG00140_ch_T0001154;gene_name=FAM224B;ID=exon:HG00140_ch_T0001154:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18743822	18743908	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG00140_ch_T0001154;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001154;transcript_name=HG00140_ch_T0001154;gene_name=FAM224B;ID=intron:HG00140_ch_T0001154:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18743909	18743993	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG00140_ch_T0001154;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001154;transcript_name=HG00140_ch_T0001154;gene_name=FAM224B;ID=exon:HG00140_ch_T0001154:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18743994	18761263	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG00140_ch_T0001154;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001154;transcript_name=HG00140_ch_T0001154;gene_name=FAM224B;ID=intron:HG00140_ch_T0001154:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18761264	18761320	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG00140_ch_T0001154;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001154;transcript_name=HG00140_ch_T0001154;gene_name=FAM224B;ID=exon:HG00140_ch_T0001154:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18761321	18761745	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG00140_ch_T0001154;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001154;transcript_name=HG00140_ch_T0001154;gene_name=FAM224B;ID=intron:HG00140_ch_T0001154:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18761746	18761819	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG00140_ch_T0001154;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001154;transcript_name=HG00140_ch_T0001154;gene_name=FAM224B;ID=exon:HG00140_ch_T0001154:3;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18761820	18762614	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG00140_ch_T0001154;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001154;transcript_name=HG00140_ch_T0001154;gene_name=FAM224B;ID=intron:HG00140_ch_T0001154:3;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18762615	18762770	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG00140_ch_T0001154;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001154;transcript_name=HG00140_ch_T0001154;gene_name=FAM224B;ID=exon:HG00140_ch_T0001154:4;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18762771	18765105	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG00140_ch_T0001154;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001154;transcript_name=HG00140_ch_T0001154;gene_name=FAM224B;ID=intron:HG00140_ch_T0001154:4;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18765106	18765235	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG00140_ch_T0001154;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001154;transcript_name=HG00140_ch_T0001154;gene_name=FAM224B;ID=exon:HG00140_ch_T0001154:5;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18765236	18766570	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG00140_ch_T0001154;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001154;transcript_name=HG00140_ch_T0001154;gene_name=FAM224B;ID=intron:HG00140_ch_T0001154:5;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18766571	18766688	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG00140_ch_T0001154;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001154;transcript_name=HG00140_ch_T0001154;gene_name=FAM224B;ID=exon:HG00140_ch_T0001154:6;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18766689	18769188	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG00140_ch_T0001154;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001154;transcript_name=HG00140_ch_T0001154;gene_name=FAM224B;ID=intron:HG00140_ch_T0001154:6;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18769189	18769422	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG00140_ch_T0001154;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001154;transcript_name=HG00140_ch_T0001154;gene_name=FAM224B;ID=exon:HG00140_ch_T0001154:7;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18769423	18769538	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG00140_ch_T0001154;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001154;transcript_name=HG00140_ch_T0001154;gene_name=FAM224B;ID=intron:HG00140_ch_T0001154:7;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18769539	18769706	.	-	.	source_transcript=ENST00000729288.1;source_transcript_name=FAM224B-207;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729288.1;transcript_id=HG00140_ch_T0001154;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001154;transcript_name=HG00140_ch_T0001154;gene_name=FAM224B;ID=exon:HG00140_ch_T0001154:8;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	18743161	18769747	1000	-	.	source_transcript=ENST00000729286.1;source_transcript_name=FAM224B-205;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729286.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729286.1;transcript_id=HG00140_ch_T0001155;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_G0000382;transcript_name=HG00140_ch_T0001155;gene_name=FAM224B;ID=HG00140_ch_T0001155;Name=FAM224B
HG00140_chrY	CAT	exon	18743161	18743821	.	-	.	source_transcript=ENST00000729286.1;source_transcript_name=FAM224B-205;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729286.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729286.1;transcript_id=HG00140_ch_T0001155;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001155;transcript_name=HG00140_ch_T0001155;gene_name=FAM224B;ID=exon:HG00140_ch_T0001155:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18743822	18743908	.	-	.	source_transcript=ENST00000729286.1;source_transcript_name=FAM224B-205;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729286.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729286.1;transcript_id=HG00140_ch_T0001155;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001155;transcript_name=HG00140_ch_T0001155;gene_name=FAM224B;ID=intron:HG00140_ch_T0001155:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18743909	18743993	.	-	.	source_transcript=ENST00000729286.1;source_transcript_name=FAM224B-205;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729286.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729286.1;transcript_id=HG00140_ch_T0001155;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001155;transcript_name=HG00140_ch_T0001155;gene_name=FAM224B;ID=exon:HG00140_ch_T0001155:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18743994	18766570	.	-	.	source_transcript=ENST00000729286.1;source_transcript_name=FAM224B-205;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729286.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729286.1;transcript_id=HG00140_ch_T0001155;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001155;transcript_name=HG00140_ch_T0001155;gene_name=FAM224B;ID=intron:HG00140_ch_T0001155:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18766571	18766688	.	-	.	source_transcript=ENST00000729286.1;source_transcript_name=FAM224B-205;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729286.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729286.1;transcript_id=HG00140_ch_T0001155;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001155;transcript_name=HG00140_ch_T0001155;gene_name=FAM224B;ID=exon:HG00140_ch_T0001155:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18766689	18769188	.	-	.	source_transcript=ENST00000729286.1;source_transcript_name=FAM224B-205;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729286.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729286.1;transcript_id=HG00140_ch_T0001155;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001155;transcript_name=HG00140_ch_T0001155;gene_name=FAM224B;ID=intron:HG00140_ch_T0001155:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18769189	18769348	.	-	.	source_transcript=ENST00000729286.1;source_transcript_name=FAM224B-205;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729286.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729286.1;transcript_id=HG00140_ch_T0001155;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001155;transcript_name=HG00140_ch_T0001155;gene_name=FAM224B;ID=exon:HG00140_ch_T0001155:3;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18769349	18769538	.	-	.	source_transcript=ENST00000729286.1;source_transcript_name=FAM224B-205;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729286.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729286.1;transcript_id=HG00140_ch_T0001155;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001155;transcript_name=HG00140_ch_T0001155;gene_name=FAM224B;ID=intron:HG00140_ch_T0001155:3;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18769539	18769747	.	-	.	source_transcript=ENST00000729286.1;source_transcript_name=FAM224B-205;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729286.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729286.1;transcript_id=HG00140_ch_T0001155;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001155;transcript_name=HG00140_ch_T0001155;gene_name=FAM224B;ID=exon:HG00140_ch_T0001155:4;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	18743161	18769684	1000	-	.	source_transcript=ENST00000729290.1;source_transcript_name=FAM224B-209;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729290.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729290.1;transcript_id=HG00140_ch_T0001156;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_G0000382;transcript_name=HG00140_ch_T0001156;gene_name=FAM224B;ID=HG00140_ch_T0001156;Name=FAM224B
HG00140_chrY	CAT	exon	18743161	18743821	.	-	.	source_transcript=ENST00000729290.1;source_transcript_name=FAM224B-209;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729290.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729290.1;transcript_id=HG00140_ch_T0001156;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001156;transcript_name=HG00140_ch_T0001156;gene_name=FAM224B;ID=exon:HG00140_ch_T0001156:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18743822	18743908	.	-	.	source_transcript=ENST00000729290.1;source_transcript_name=FAM224B-209;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729290.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729290.1;transcript_id=HG00140_ch_T0001156;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001156;transcript_name=HG00140_ch_T0001156;gene_name=FAM224B;ID=intron:HG00140_ch_T0001156:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18743909	18743993	.	-	.	source_transcript=ENST00000729290.1;source_transcript_name=FAM224B-209;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729290.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729290.1;transcript_id=HG00140_ch_T0001156;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001156;transcript_name=HG00140_ch_T0001156;gene_name=FAM224B;ID=exon:HG00140_ch_T0001156:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18743994	18766570	.	-	.	source_transcript=ENST00000729290.1;source_transcript_name=FAM224B-209;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729290.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729290.1;transcript_id=HG00140_ch_T0001156;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001156;transcript_name=HG00140_ch_T0001156;gene_name=FAM224B;ID=intron:HG00140_ch_T0001156:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18766571	18766660	.	-	.	source_transcript=ENST00000729290.1;source_transcript_name=FAM224B-209;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729290.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729290.1;transcript_id=HG00140_ch_T0001156;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001156;transcript_name=HG00140_ch_T0001156;gene_name=FAM224B;ID=exon:HG00140_ch_T0001156:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18766661	18769188	.	-	.	source_transcript=ENST00000729290.1;source_transcript_name=FAM224B-209;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729290.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729290.1;transcript_id=HG00140_ch_T0001156;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001156;transcript_name=HG00140_ch_T0001156;gene_name=FAM224B;ID=intron:HG00140_ch_T0001156:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18769189	18769684	.	-	.	source_transcript=ENST00000729290.1;source_transcript_name=FAM224B-209;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729290.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729290.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729290.1;transcript_id=HG00140_ch_T0001156;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001156;transcript_name=HG00140_ch_T0001156;gene_name=FAM224B;ID=exon:HG00140_ch_T0001156:3;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	18743161	18769669	1000	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1;transcript_id=HG00140_ch_T0001157;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_G0000382;transcript_name=HG00140_ch_T0001157;gene_name=FAM224B;ID=HG00140_ch_T0001157;Name=FAM224B
HG00140_chrY	CAT	exon	18743161	18743220	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1;transcript_id=HG00140_ch_T0001157;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001157;transcript_name=HG00140_ch_T0001157;gene_name=FAM224B;ID=exon:HG00140_ch_T0001157:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18743221	18743694	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1;transcript_id=HG00140_ch_T0001157;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001157;transcript_name=HG00140_ch_T0001157;gene_name=FAM224B;ID=intron:HG00140_ch_T0001157:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18743695	18743821	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1;transcript_id=HG00140_ch_T0001157;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001157;transcript_name=HG00140_ch_T0001157;gene_name=FAM224B;ID=exon:HG00140_ch_T0001157:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18743822	18743908	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1;transcript_id=HG00140_ch_T0001157;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001157;transcript_name=HG00140_ch_T0001157;gene_name=FAM224B;ID=intron:HG00140_ch_T0001157:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18743909	18743993	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1;transcript_id=HG00140_ch_T0001157;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001157;transcript_name=HG00140_ch_T0001157;gene_name=FAM224B;ID=exon:HG00140_ch_T0001157:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18743994	18766570	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1;transcript_id=HG00140_ch_T0001157;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001157;transcript_name=HG00140_ch_T0001157;gene_name=FAM224B;ID=intron:HG00140_ch_T0001157:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18766571	18766688	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1;transcript_id=HG00140_ch_T0001157;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001157;transcript_name=HG00140_ch_T0001157;gene_name=FAM224B;ID=exon:HG00140_ch_T0001157:3;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18766689	18769188	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1;transcript_id=HG00140_ch_T0001157;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001157;transcript_name=HG00140_ch_T0001157;gene_name=FAM224B;ID=intron:HG00140_ch_T0001157:3;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18769189	18769348	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1;transcript_id=HG00140_ch_T0001157;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001157;transcript_name=HG00140_ch_T0001157;gene_name=FAM224B;ID=exon:HG00140_ch_T0001157:4;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18769349	18769538	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1;transcript_id=HG00140_ch_T0001157;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001157;transcript_name=HG00140_ch_T0001157;gene_name=FAM224B;ID=intron:HG00140_ch_T0001157:4;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18769539	18769669	.	-	.	source_transcript=ENST00000729291.1;source_transcript_name=FAM224B-210;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729291.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729291.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729291.1;transcript_id=HG00140_ch_T0001157;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001157;transcript_name=HG00140_ch_T0001157;gene_name=FAM224B;ID=exon:HG00140_ch_T0001157:5;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	18743163	18769708	1000	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1;transcript_id=HG00140_ch_T0001158;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_G0000382;transcript_name=HG00140_ch_T0001158;gene_name=FAM224B;ID=HG00140_ch_T0001158;Name=FAM224B
HG00140_chrY	CAT	exon	18743163	18743821	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1;transcript_id=HG00140_ch_T0001158;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001158;transcript_name=HG00140_ch_T0001158;gene_name=FAM224B;ID=exon:HG00140_ch_T0001158:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18743822	18743908	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1;transcript_id=HG00140_ch_T0001158;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001158;transcript_name=HG00140_ch_T0001158;gene_name=FAM224B;ID=intron:HG00140_ch_T0001158:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18743909	18743993	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1;transcript_id=HG00140_ch_T0001158;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001158;transcript_name=HG00140_ch_T0001158;gene_name=FAM224B;ID=exon:HG00140_ch_T0001158:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18743994	18765105	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1;transcript_id=HG00140_ch_T0001158;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001158;transcript_name=HG00140_ch_T0001158;gene_name=FAM224B;ID=intron:HG00140_ch_T0001158:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18765106	18765235	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1;transcript_id=HG00140_ch_T0001158;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001158;transcript_name=HG00140_ch_T0001158;gene_name=FAM224B;ID=exon:HG00140_ch_T0001158:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18765236	18766570	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1;transcript_id=HG00140_ch_T0001158;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001158;transcript_name=HG00140_ch_T0001158;gene_name=FAM224B;ID=intron:HG00140_ch_T0001158:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18766571	18766688	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1;transcript_id=HG00140_ch_T0001158;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001158;transcript_name=HG00140_ch_T0001158;gene_name=FAM224B;ID=exon:HG00140_ch_T0001158:3;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18766689	18769188	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1;transcript_id=HG00140_ch_T0001158;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001158;transcript_name=HG00140_ch_T0001158;gene_name=FAM224B;ID=intron:HG00140_ch_T0001158:3;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18769189	18769348	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1;transcript_id=HG00140_ch_T0001158;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001158;transcript_name=HG00140_ch_T0001158;gene_name=FAM224B;ID=exon:HG00140_ch_T0001158:4;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18769349	18769538	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1;transcript_id=HG00140_ch_T0001158;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001158;transcript_name=HG00140_ch_T0001158;gene_name=FAM224B;ID=intron:HG00140_ch_T0001158:4;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18769539	18769708	.	-	.	source_transcript=ENST00000729289.1;source_transcript_name=FAM224B-208;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729289.1;transcript_id=HG00140_ch_T0001158;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001158;transcript_name=HG00140_ch_T0001158;gene_name=FAM224B;ID=exon:HG00140_ch_T0001158:5;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	18743166	18769727	1000	-	.	source_transcript=ENST00000729287.1;source_transcript_name=FAM224B-206;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729287.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729287.1;transcript_id=HG00140_ch_T0001159;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_G0000382;transcript_name=HG00140_ch_T0001159;gene_name=FAM224B;ID=HG00140_ch_T0001159;Name=FAM224B
HG00140_chrY	CAT	exon	18743166	18743220	.	-	.	source_transcript=ENST00000729287.1;source_transcript_name=FAM224B-206;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729287.1;transcript_id=HG00140_ch_T0001159;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001159;transcript_name=HG00140_ch_T0001159;gene_name=FAM224B;ID=exon:HG00140_ch_T0001159:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18743221	18743694	.	-	.	source_transcript=ENST00000729287.1;source_transcript_name=FAM224B-206;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729287.1;transcript_id=HG00140_ch_T0001159;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001159;transcript_name=HG00140_ch_T0001159;gene_name=FAM224B;ID=intron:HG00140_ch_T0001159:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18743695	18743821	.	-	.	source_transcript=ENST00000729287.1;source_transcript_name=FAM224B-206;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729287.1;transcript_id=HG00140_ch_T0001159;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001159;transcript_name=HG00140_ch_T0001159;gene_name=FAM224B;ID=exon:HG00140_ch_T0001159:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18743822	18743908	.	-	.	source_transcript=ENST00000729287.1;source_transcript_name=FAM224B-206;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729287.1;transcript_id=HG00140_ch_T0001159;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001159;transcript_name=HG00140_ch_T0001159;gene_name=FAM224B;ID=intron:HG00140_ch_T0001159:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18743909	18743993	.	-	.	source_transcript=ENST00000729287.1;source_transcript_name=FAM224B-206;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729287.1;transcript_id=HG00140_ch_T0001159;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001159;transcript_name=HG00140_ch_T0001159;gene_name=FAM224B;ID=exon:HG00140_ch_T0001159:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18743994	18766570	.	-	.	source_transcript=ENST00000729287.1;source_transcript_name=FAM224B-206;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729287.1;transcript_id=HG00140_ch_T0001159;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001159;transcript_name=HG00140_ch_T0001159;gene_name=FAM224B;ID=intron:HG00140_ch_T0001159:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18766571	18766688	.	-	.	source_transcript=ENST00000729287.1;source_transcript_name=FAM224B-206;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729287.1;transcript_id=HG00140_ch_T0001159;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001159;transcript_name=HG00140_ch_T0001159;gene_name=FAM224B;ID=exon:HG00140_ch_T0001159:3;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18766689	18769188	.	-	.	source_transcript=ENST00000729287.1;source_transcript_name=FAM224B-206;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729287.1;transcript_id=HG00140_ch_T0001159;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001159;transcript_name=HG00140_ch_T0001159;gene_name=FAM224B;ID=intron:HG00140_ch_T0001159:3;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18769189	18769727	.	-	.	source_transcript=ENST00000729287.1;source_transcript_name=FAM224B-206;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729287.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729287.1;transcript_id=HG00140_ch_T0001159;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001159;transcript_name=HG00140_ch_T0001159;gene_name=FAM224B;ID=exon:HG00140_ch_T0001159:4;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	18743433	18769677	1000	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1;transcript_id=HG00140_ch_T0001160;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_G0000382;transcript_name=HG00140_ch_T0001160;gene_name=FAM224B;ID=HG00140_ch_T0001160;Name=FAM224B
HG00140_chrY	CAT	exon	18743433	18743821	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1;transcript_id=HG00140_ch_T0001160;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001160;transcript_name=HG00140_ch_T0001160;gene_name=FAM224B;ID=exon:HG00140_ch_T0001160:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18743822	18743908	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1;transcript_id=HG00140_ch_T0001160;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001160;transcript_name=HG00140_ch_T0001160;gene_name=FAM224B;ID=intron:HG00140_ch_T0001160:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18743909	18743993	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1;transcript_id=HG00140_ch_T0001160;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001160;transcript_name=HG00140_ch_T0001160;gene_name=FAM224B;ID=exon:HG00140_ch_T0001160:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18743994	18765105	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1;transcript_id=HG00140_ch_T0001160;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001160;transcript_name=HG00140_ch_T0001160;gene_name=FAM224B;ID=intron:HG00140_ch_T0001160:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18765106	18765235	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1;transcript_id=HG00140_ch_T0001160;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001160;transcript_name=HG00140_ch_T0001160;gene_name=FAM224B;ID=exon:HG00140_ch_T0001160:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18765236	18766570	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1;transcript_id=HG00140_ch_T0001160;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001160;transcript_name=HG00140_ch_T0001160;gene_name=FAM224B;ID=intron:HG00140_ch_T0001160:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18766571	18766688	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1;transcript_id=HG00140_ch_T0001160;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001160;transcript_name=HG00140_ch_T0001160;gene_name=FAM224B;ID=exon:HG00140_ch_T0001160:3;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18766689	18767542	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1;transcript_id=HG00140_ch_T0001160;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001160;transcript_name=HG00140_ch_T0001160;gene_name=FAM224B;ID=intron:HG00140_ch_T0001160:3;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18767543	18767640	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1;transcript_id=HG00140_ch_T0001160;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001160;transcript_name=HG00140_ch_T0001160;gene_name=FAM224B;ID=exon:HG00140_ch_T0001160:4;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18767641	18769538	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1;transcript_id=HG00140_ch_T0001160;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001160;transcript_name=HG00140_ch_T0001160;gene_name=FAM224B;ID=intron:HG00140_ch_T0001160:4;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18769539	18769677	.	-	.	source_transcript=ENST00000729294.1;source_transcript_name=FAM224B-213;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729294.1;transcript_id=HG00140_ch_T0001160;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001160;transcript_name=HG00140_ch_T0001160;gene_name=FAM224B;ID=exon:HG00140_ch_T0001160:5;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	18743435	18769683	1000	-	.	source_transcript=ENST00000729293.1;source_transcript_name=FAM224B-212;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729293.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729293.1;transcript_id=HG00140_ch_T0001161;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_G0000382;transcript_name=HG00140_ch_T0001161;gene_name=FAM224B;ID=HG00140_ch_T0001161;Name=FAM224B
HG00140_chrY	CAT	exon	18743435	18743821	.	-	.	source_transcript=ENST00000729293.1;source_transcript_name=FAM224B-212;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729293.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729293.1;transcript_id=HG00140_ch_T0001161;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001161;transcript_name=HG00140_ch_T0001161;gene_name=FAM224B;ID=exon:HG00140_ch_T0001161:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18743822	18743908	.	-	.	source_transcript=ENST00000729293.1;source_transcript_name=FAM224B-212;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729293.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729293.1;transcript_id=HG00140_ch_T0001161;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001161;transcript_name=HG00140_ch_T0001161;gene_name=FAM224B;ID=intron:HG00140_ch_T0001161:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18743909	18743993	.	-	.	source_transcript=ENST00000729293.1;source_transcript_name=FAM224B-212;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729293.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729293.1;transcript_id=HG00140_ch_T0001161;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001161;transcript_name=HG00140_ch_T0001161;gene_name=FAM224B;ID=exon:HG00140_ch_T0001161:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18743994	18766570	.	-	.	source_transcript=ENST00000729293.1;source_transcript_name=FAM224B-212;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729293.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729293.1;transcript_id=HG00140_ch_T0001161;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001161;transcript_name=HG00140_ch_T0001161;gene_name=FAM224B;ID=intron:HG00140_ch_T0001161:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18766571	18766688	.	-	.	source_transcript=ENST00000729293.1;source_transcript_name=FAM224B-212;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729293.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729293.1;transcript_id=HG00140_ch_T0001161;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001161;transcript_name=HG00140_ch_T0001161;gene_name=FAM224B;ID=exon:HG00140_ch_T0001161:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18766689	18769188	.	-	.	source_transcript=ENST00000729293.1;source_transcript_name=FAM224B-212;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729293.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729293.1;transcript_id=HG00140_ch_T0001161;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001161;transcript_name=HG00140_ch_T0001161;gene_name=FAM224B;ID=intron:HG00140_ch_T0001161:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18769189	18769422	.	-	.	source_transcript=ENST00000729293.1;source_transcript_name=FAM224B-212;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729293.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729293.1;transcript_id=HG00140_ch_T0001161;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001161;transcript_name=HG00140_ch_T0001161;gene_name=FAM224B;ID=exon:HG00140_ch_T0001161:3;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18769423	18769538	.	-	.	source_transcript=ENST00000729293.1;source_transcript_name=FAM224B-212;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729293.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729293.1;transcript_id=HG00140_ch_T0001161;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001161;transcript_name=HG00140_ch_T0001161;gene_name=FAM224B;ID=intron:HG00140_ch_T0001161:3;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18769539	18769683	.	-	.	source_transcript=ENST00000729293.1;source_transcript_name=FAM224B-212;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729293.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729293.1;transcript_id=HG00140_ch_T0001161;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001161;transcript_name=HG00140_ch_T0001161;gene_name=FAM224B;ID=exon:HG00140_ch_T0001161:4;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	18743438	18769523	1000	-	.	source_transcript=ENST00000729295.1;source_transcript_name=FAM224B-214;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729295.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729295.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729295.1;transcript_id=HG00140_ch_T0001162;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_G0000382;transcript_name=HG00140_ch_T0001162;gene_name=FAM224B;ID=HG00140_ch_T0001162;Name=FAM224B
HG00140_chrY	CAT	exon	18743438	18743821	.	-	.	source_transcript=ENST00000729295.1;source_transcript_name=FAM224B-214;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729295.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729295.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729295.1;transcript_id=HG00140_ch_T0001162;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001162;transcript_name=HG00140_ch_T0001162;gene_name=FAM224B;ID=exon:HG00140_ch_T0001162:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18743822	18743908	.	-	.	source_transcript=ENST00000729295.1;source_transcript_name=FAM224B-214;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729295.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729295.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729295.1;transcript_id=HG00140_ch_T0001162;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001162;transcript_name=HG00140_ch_T0001162;gene_name=FAM224B;ID=intron:HG00140_ch_T0001162:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18743909	18743993	.	-	.	source_transcript=ENST00000729295.1;source_transcript_name=FAM224B-214;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729295.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729295.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729295.1;transcript_id=HG00140_ch_T0001162;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001162;transcript_name=HG00140_ch_T0001162;gene_name=FAM224B;ID=exon:HG00140_ch_T0001162:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18743994	18761263	.	-	.	source_transcript=ENST00000729295.1;source_transcript_name=FAM224B-214;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729295.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729295.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729295.1;transcript_id=HG00140_ch_T0001162;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001162;transcript_name=HG00140_ch_T0001162;gene_name=FAM224B;ID=intron:HG00140_ch_T0001162:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18761264	18761320	.	-	.	source_transcript=ENST00000729295.1;source_transcript_name=FAM224B-214;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729295.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729295.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729295.1;transcript_id=HG00140_ch_T0001162;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001162;transcript_name=HG00140_ch_T0001162;gene_name=FAM224B;ID=exon:HG00140_ch_T0001162:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18761321	18766570	.	-	.	source_transcript=ENST00000729295.1;source_transcript_name=FAM224B-214;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729295.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729295.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729295.1;transcript_id=HG00140_ch_T0001162;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001162;transcript_name=HG00140_ch_T0001162;gene_name=FAM224B;ID=intron:HG00140_ch_T0001162:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18766571	18766688	.	-	.	source_transcript=ENST00000729295.1;source_transcript_name=FAM224B-214;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729295.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729295.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729295.1;transcript_id=HG00140_ch_T0001162;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001162;transcript_name=HG00140_ch_T0001162;gene_name=FAM224B;ID=exon:HG00140_ch_T0001162:3;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18766689	18769188	.	-	.	source_transcript=ENST00000729295.1;source_transcript_name=FAM224B-214;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729295.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729295.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729295.1;transcript_id=HG00140_ch_T0001162;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001162;transcript_name=HG00140_ch_T0001162;gene_name=FAM224B;ID=intron:HG00140_ch_T0001162:3;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18769189	18769523	.	-	.	source_transcript=ENST00000729295.1;source_transcript_name=FAM224B-214;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729295.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729295.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729295.1;transcript_id=HG00140_ch_T0001162;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001162;transcript_name=HG00140_ch_T0001162;gene_name=FAM224B;ID=exon:HG00140_ch_T0001162:4;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	18743449	18769727	1000	-	.	source_transcript=ENST00000729292.1;source_transcript_name=FAM224B-211;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729292.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729292.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729292.1;transcript_id=HG00140_ch_T0001163;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_G0000382;transcript_name=HG00140_ch_T0001163;gene_name=FAM224B;ID=HG00140_ch_T0001163;Name=FAM224B
HG00140_chrY	CAT	exon	18743449	18743821	.	-	.	source_transcript=ENST00000729292.1;source_transcript_name=FAM224B-211;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729292.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729292.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729292.1;transcript_id=HG00140_ch_T0001163;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001163;transcript_name=HG00140_ch_T0001163;gene_name=FAM224B;ID=exon:HG00140_ch_T0001163:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18743822	18743908	.	-	.	source_transcript=ENST00000729292.1;source_transcript_name=FAM224B-211;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729292.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729292.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729292.1;transcript_id=HG00140_ch_T0001163;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001163;transcript_name=HG00140_ch_T0001163;gene_name=FAM224B;ID=intron:HG00140_ch_T0001163:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18743909	18743993	.	-	.	source_transcript=ENST00000729292.1;source_transcript_name=FAM224B-211;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729292.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729292.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729292.1;transcript_id=HG00140_ch_T0001163;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001163;transcript_name=HG00140_ch_T0001163;gene_name=FAM224B;ID=exon:HG00140_ch_T0001163:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18743994	18769538	.	-	.	source_transcript=ENST00000729292.1;source_transcript_name=FAM224B-211;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729292.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729292.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729292.1;transcript_id=HG00140_ch_T0001163;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001163;transcript_name=HG00140_ch_T0001163;gene_name=FAM224B;ID=intron:HG00140_ch_T0001163:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18769539	18769727	.	-	.	source_transcript=ENST00000729292.1;source_transcript_name=FAM224B-211;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729292.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729292.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729292.1;transcript_id=HG00140_ch_T0001163;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001163;transcript_name=HG00140_ch_T0001163;gene_name=FAM224B;ID=exon:HG00140_ch_T0001163:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	18764211	18769738	1000	-	.	source_transcript=ENST00000729296.1;source_transcript_name=FAM224B-215;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729296.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729296.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729296.1;transcript_id=HG00140_ch_T0001167;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_G0000382;transcript_name=HG00140_ch_T0001167;gene_name=FAM224B;ID=HG00140_ch_T0001167;Name=FAM224B
HG00140_chrY	CAT	exon	18764211	18765235	.	-	.	source_transcript=ENST00000729296.1;source_transcript_name=FAM224B-215;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729296.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729296.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729296.1;transcript_id=HG00140_ch_T0001167;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001167;transcript_name=HG00140_ch_T0001167;gene_name=FAM224B;ID=exon:HG00140_ch_T0001167:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18765236	18766570	.	-	.	source_transcript=ENST00000729296.1;source_transcript_name=FAM224B-215;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729296.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729296.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729296.1;transcript_id=HG00140_ch_T0001167;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001167;transcript_name=HG00140_ch_T0001167;gene_name=FAM224B;ID=intron:HG00140_ch_T0001167:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18766571	18766688	.	-	.	source_transcript=ENST00000729296.1;source_transcript_name=FAM224B-215;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729296.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729296.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729296.1;transcript_id=HG00140_ch_T0001167;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001167;transcript_name=HG00140_ch_T0001167;gene_name=FAM224B;ID=exon:HG00140_ch_T0001167:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18766689	18769188	.	-	.	source_transcript=ENST00000729296.1;source_transcript_name=FAM224B-215;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729296.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729296.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729296.1;transcript_id=HG00140_ch_T0001167;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001167;transcript_name=HG00140_ch_T0001167;gene_name=FAM224B;ID=intron:HG00140_ch_T0001167:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18769189	18769738	.	-	.	source_transcript=ENST00000729296.1;source_transcript_name=FAM224B-215;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729296.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729296.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729296.1;transcript_id=HG00140_ch_T0001167;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001167;transcript_name=HG00140_ch_T0001167;gene_name=FAM224B;ID=exon:HG00140_ch_T0001167:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	18764995	18769833	1000	-	.	source_transcript=ENST00000729297.1;source_transcript_name=FAM224B-216;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729297.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729297.1;transcript_id=HG00140_ch_T0001168;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_G0000382;transcript_name=HG00140_ch_T0001168;gene_name=FAM224B;ID=HG00140_ch_T0001168;Name=FAM224B
HG00140_chrY	CAT	exon	18764995	18765235	.	-	.	source_transcript=ENST00000729297.1;source_transcript_name=FAM224B-216;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729297.1;transcript_id=HG00140_ch_T0001168;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001168;transcript_name=HG00140_ch_T0001168;gene_name=FAM224B;ID=exon:HG00140_ch_T0001168:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18765236	18766570	.	-	.	source_transcript=ENST00000729297.1;source_transcript_name=FAM224B-216;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729297.1;transcript_id=HG00140_ch_T0001168;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001168;transcript_name=HG00140_ch_T0001168;gene_name=FAM224B;ID=intron:HG00140_ch_T0001168:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18766571	18766688	.	-	.	source_transcript=ENST00000729297.1;source_transcript_name=FAM224B-216;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729297.1;transcript_id=HG00140_ch_T0001168;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001168;transcript_name=HG00140_ch_T0001168;gene_name=FAM224B;ID=exon:HG00140_ch_T0001168:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18766689	18769188	.	-	.	source_transcript=ENST00000729297.1;source_transcript_name=FAM224B-216;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729297.1;transcript_id=HG00140_ch_T0001168;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001168;transcript_name=HG00140_ch_T0001168;gene_name=FAM224B;ID=intron:HG00140_ch_T0001168:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18769189	18769348	.	-	.	source_transcript=ENST00000729297.1;source_transcript_name=FAM224B-216;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729297.1;transcript_id=HG00140_ch_T0001168;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001168;transcript_name=HG00140_ch_T0001168;gene_name=FAM224B;ID=exon:HG00140_ch_T0001168:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18769349	18769538	.	-	.	source_transcript=ENST00000729297.1;source_transcript_name=FAM224B-216;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729297.1;transcript_id=HG00140_ch_T0001168;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001168;transcript_name=HG00140_ch_T0001168;gene_name=FAM224B;ID=intron:HG00140_ch_T0001168:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18769539	18769833	.	-	.	source_transcript=ENST00000729297.1;source_transcript_name=FAM224B-216;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729297.1;transcript_id=HG00140_ch_T0001168;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001168;transcript_name=HG00140_ch_T0001168;gene_name=FAM224B;ID=exon:HG00140_ch_T0001168:3;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	18765011	18769745	1000	-	.	source_transcript=ENST00000729298.1;source_transcript_name=FAM224B-217;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729298.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729298.1;transcript_id=HG00140_ch_T0001169;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_G0000382;transcript_name=HG00140_ch_T0001169;gene_name=FAM224B;ID=HG00140_ch_T0001169;Name=FAM224B
HG00140_chrY	CAT	exon	18765011	18765235	.	-	.	source_transcript=ENST00000729298.1;source_transcript_name=FAM224B-217;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729298.1;transcript_id=HG00140_ch_T0001169;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001169;transcript_name=HG00140_ch_T0001169;gene_name=FAM224B;ID=exon:HG00140_ch_T0001169:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18765236	18766570	.	-	.	source_transcript=ENST00000729298.1;source_transcript_name=FAM224B-217;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729298.1;transcript_id=HG00140_ch_T0001169;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001169;transcript_name=HG00140_ch_T0001169;gene_name=FAM224B;ID=intron:HG00140_ch_T0001169:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18766571	18766688	.	-	.	source_transcript=ENST00000729298.1;source_transcript_name=FAM224B-217;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729298.1;transcript_id=HG00140_ch_T0001169;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001169;transcript_name=HG00140_ch_T0001169;gene_name=FAM224B;ID=exon:HG00140_ch_T0001169:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18766689	18769188	.	-	.	source_transcript=ENST00000729298.1;source_transcript_name=FAM224B-217;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729298.1;transcript_id=HG00140_ch_T0001169;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001169;transcript_name=HG00140_ch_T0001169;gene_name=FAM224B;ID=intron:HG00140_ch_T0001169:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18769189	18769422	.	-	.	source_transcript=ENST00000729298.1;source_transcript_name=FAM224B-217;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729298.1;transcript_id=HG00140_ch_T0001169;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001169;transcript_name=HG00140_ch_T0001169;gene_name=FAM224B;ID=exon:HG00140_ch_T0001169:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18769423	18769538	.	-	.	source_transcript=ENST00000729298.1;source_transcript_name=FAM224B-217;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729298.1;transcript_id=HG00140_ch_T0001169;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001169;transcript_name=HG00140_ch_T0001169;gene_name=FAM224B;ID=intron:HG00140_ch_T0001169:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18769539	18769745	.	-	.	source_transcript=ENST00000729298.1;source_transcript_name=FAM224B-217;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729298.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729298.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729298.1;transcript_id=HG00140_ch_T0001169;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001169;transcript_name=HG00140_ch_T0001169;gene_name=FAM224B;ID=exon:HG00140_ch_T0001169:3;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	18765011	18769727	1000	-	.	source_transcript=ENST00000729300.1;source_transcript_name=FAM224B-219;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729300.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729300.1;transcript_id=HG00140_ch_T0001170;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_G0000382;transcript_name=HG00140_ch_T0001170;gene_name=FAM224B;ID=HG00140_ch_T0001170;Name=FAM224B
HG00140_chrY	CAT	exon	18765011	18765235	.	-	.	source_transcript=ENST00000729300.1;source_transcript_name=FAM224B-219;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729300.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729300.1;transcript_id=HG00140_ch_T0001170;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001170;transcript_name=HG00140_ch_T0001170;gene_name=FAM224B;ID=exon:HG00140_ch_T0001170:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18765236	18766570	.	-	.	source_transcript=ENST00000729300.1;source_transcript_name=FAM224B-219;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729300.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729300.1;transcript_id=HG00140_ch_T0001170;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001170;transcript_name=HG00140_ch_T0001170;gene_name=FAM224B;ID=intron:HG00140_ch_T0001170:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18766571	18766660	.	-	.	source_transcript=ENST00000729300.1;source_transcript_name=FAM224B-219;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729300.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729300.1;transcript_id=HG00140_ch_T0001170;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001170;transcript_name=HG00140_ch_T0001170;gene_name=FAM224B;ID=exon:HG00140_ch_T0001170:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18766661	18769188	.	-	.	source_transcript=ENST00000729300.1;source_transcript_name=FAM224B-219;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729300.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729300.1;transcript_id=HG00140_ch_T0001170;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001170;transcript_name=HG00140_ch_T0001170;gene_name=FAM224B;ID=intron:HG00140_ch_T0001170:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18769189	18769348	.	-	.	source_transcript=ENST00000729300.1;source_transcript_name=FAM224B-219;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729300.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729300.1;transcript_id=HG00140_ch_T0001170;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001170;transcript_name=HG00140_ch_T0001170;gene_name=FAM224B;ID=exon:HG00140_ch_T0001170:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18769349	18769538	.	-	.	source_transcript=ENST00000729300.1;source_transcript_name=FAM224B-219;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729300.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729300.1;transcript_id=HG00140_ch_T0001170;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001170;transcript_name=HG00140_ch_T0001170;gene_name=FAM224B;ID=intron:HG00140_ch_T0001170:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18769539	18769727	.	-	.	source_transcript=ENST00000729300.1;source_transcript_name=FAM224B-219;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729300.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729300.1;transcript_id=HG00140_ch_T0001170;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001170;transcript_name=HG00140_ch_T0001170;gene_name=FAM224B;ID=exon:HG00140_ch_T0001170:3;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	18765025	18769742	1000	-	.	source_transcript=ENST00000729299.1;source_transcript_name=FAM224B-218;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729299.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729299.1;transcript_id=HG00140_ch_T0001171;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_G0000382;transcript_name=HG00140_ch_T0001171;gene_name=FAM224B;ID=HG00140_ch_T0001171;Name=FAM224B
HG00140_chrY	CAT	exon	18765025	18765235	.	-	.	source_transcript=ENST00000729299.1;source_transcript_name=FAM224B-218;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729299.1;transcript_id=HG00140_ch_T0001171;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001171;transcript_name=HG00140_ch_T0001171;gene_name=FAM224B;ID=exon:HG00140_ch_T0001171:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18765236	18766570	.	-	.	source_transcript=ENST00000729299.1;source_transcript_name=FAM224B-218;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729299.1;transcript_id=HG00140_ch_T0001171;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001171;transcript_name=HG00140_ch_T0001171;gene_name=FAM224B;ID=intron:HG00140_ch_T0001171:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18766571	18766688	.	-	.	source_transcript=ENST00000729299.1;source_transcript_name=FAM224B-218;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729299.1;transcript_id=HG00140_ch_T0001171;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001171;transcript_name=HG00140_ch_T0001171;gene_name=FAM224B;ID=exon:HG00140_ch_T0001171:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18766689	18769538	.	-	.	source_transcript=ENST00000729299.1;source_transcript_name=FAM224B-218;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729299.1;transcript_id=HG00140_ch_T0001171;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001171;transcript_name=HG00140_ch_T0001171;gene_name=FAM224B;ID=intron:HG00140_ch_T0001171:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18769539	18769742	.	-	.	source_transcript=ENST00000729299.1;source_transcript_name=FAM224B-218;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729299.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729299.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729299.1;transcript_id=HG00140_ch_T0001171;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001171;transcript_name=HG00140_ch_T0001171;gene_name=FAM224B;ID=exon:HG00140_ch_T0001171:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	18765029	18769699	1000	-	.	source_transcript=ENST00000729305.1;source_transcript_name=FAM224B-224;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729305.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729305.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729305.1;transcript_id=HG00140_ch_T0001172;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_G0000382;transcript_name=HG00140_ch_T0001172;gene_name=FAM224B;ID=HG00140_ch_T0001172;Name=FAM224B
HG00140_chrY	CAT	exon	18765029	18765235	.	-	.	source_transcript=ENST00000729305.1;source_transcript_name=FAM224B-224;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729305.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729305.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729305.1;transcript_id=HG00140_ch_T0001172;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001172;transcript_name=HG00140_ch_T0001172;gene_name=FAM224B;ID=exon:HG00140_ch_T0001172:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18765236	18766570	.	-	.	source_transcript=ENST00000729305.1;source_transcript_name=FAM224B-224;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729305.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729305.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729305.1;transcript_id=HG00140_ch_T0001172;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001172;transcript_name=HG00140_ch_T0001172;gene_name=FAM224B;ID=intron:HG00140_ch_T0001172:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18766571	18766660	.	-	.	source_transcript=ENST00000729305.1;source_transcript_name=FAM224B-224;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729305.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729305.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729305.1;transcript_id=HG00140_ch_T0001172;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001172;transcript_name=HG00140_ch_T0001172;gene_name=FAM224B;ID=exon:HG00140_ch_T0001172:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18766661	18769188	.	-	.	source_transcript=ENST00000729305.1;source_transcript_name=FAM224B-224;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729305.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729305.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729305.1;transcript_id=HG00140_ch_T0001172;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001172;transcript_name=HG00140_ch_T0001172;gene_name=FAM224B;ID=intron:HG00140_ch_T0001172:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18769189	18769699	.	-	.	source_transcript=ENST00000729305.1;source_transcript_name=FAM224B-224;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729305.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729305.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729305.1;transcript_id=HG00140_ch_T0001172;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001172;transcript_name=HG00140_ch_T0001172;gene_name=FAM224B;ID=exon:HG00140_ch_T0001172:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	18765029	18769684	1000	-	.	source_transcript=ENST00000729306.1;source_transcript_name=FAM224B-225;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729306.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729306.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729306.1;transcript_id=HG00140_ch_T0001173;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_G0000382;transcript_name=HG00140_ch_T0001173;gene_name=FAM224B;ID=HG00140_ch_T0001173;Name=FAM224B
HG00140_chrY	CAT	exon	18765029	18765235	.	-	.	source_transcript=ENST00000729306.1;source_transcript_name=FAM224B-225;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729306.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729306.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729306.1;transcript_id=HG00140_ch_T0001173;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001173;transcript_name=HG00140_ch_T0001173;gene_name=FAM224B;ID=exon:HG00140_ch_T0001173:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18765236	18766570	.	-	.	source_transcript=ENST00000729306.1;source_transcript_name=FAM224B-225;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729306.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729306.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729306.1;transcript_id=HG00140_ch_T0001173;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001173;transcript_name=HG00140_ch_T0001173;gene_name=FAM224B;ID=intron:HG00140_ch_T0001173:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18766571	18767640	.	-	.	source_transcript=ENST00000729306.1;source_transcript_name=FAM224B-225;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729306.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729306.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729306.1;transcript_id=HG00140_ch_T0001173;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001173;transcript_name=HG00140_ch_T0001173;gene_name=FAM224B;ID=exon:HG00140_ch_T0001173:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18767641	18769188	.	-	.	source_transcript=ENST00000729306.1;source_transcript_name=FAM224B-225;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729306.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729306.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729306.1;transcript_id=HG00140_ch_T0001173;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001173;transcript_name=HG00140_ch_T0001173;gene_name=FAM224B;ID=intron:HG00140_ch_T0001173:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18769189	18769684	.	-	.	source_transcript=ENST00000729306.1;source_transcript_name=FAM224B-225;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729306.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729306.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729306.1;transcript_id=HG00140_ch_T0001173;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001173;transcript_name=HG00140_ch_T0001173;gene_name=FAM224B;ID=exon:HG00140_ch_T0001173:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	18765033	18769716	1000	-	.	source_transcript=ENST00000729302.1;source_transcript_name=FAM224B-221;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729302.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729302.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729302.1;transcript_id=HG00140_ch_T0001174;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_G0000382;transcript_name=HG00140_ch_T0001174;gene_name=FAM224B;ID=HG00140_ch_T0001174;Name=FAM224B
HG00140_chrY	CAT	exon	18765033	18765235	.	-	.	source_transcript=ENST00000729302.1;source_transcript_name=FAM224B-221;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729302.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729302.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729302.1;transcript_id=HG00140_ch_T0001174;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001174;transcript_name=HG00140_ch_T0001174;gene_name=FAM224B;ID=exon:HG00140_ch_T0001174:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18765236	18766570	.	-	.	source_transcript=ENST00000729302.1;source_transcript_name=FAM224B-221;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729302.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729302.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729302.1;transcript_id=HG00140_ch_T0001174;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001174;transcript_name=HG00140_ch_T0001174;gene_name=FAM224B;ID=intron:HG00140_ch_T0001174:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18766571	18766688	.	-	.	source_transcript=ENST00000729302.1;source_transcript_name=FAM224B-221;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729302.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729302.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729302.1;transcript_id=HG00140_ch_T0001174;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001174;transcript_name=HG00140_ch_T0001174;gene_name=FAM224B;ID=exon:HG00140_ch_T0001174:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18766689	18767542	.	-	.	source_transcript=ENST00000729302.1;source_transcript_name=FAM224B-221;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729302.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729302.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729302.1;transcript_id=HG00140_ch_T0001174;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001174;transcript_name=HG00140_ch_T0001174;gene_name=FAM224B;ID=intron:HG00140_ch_T0001174:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18767543	18767640	.	-	.	source_transcript=ENST00000729302.1;source_transcript_name=FAM224B-221;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729302.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729302.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729302.1;transcript_id=HG00140_ch_T0001174;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001174;transcript_name=HG00140_ch_T0001174;gene_name=FAM224B;ID=exon:HG00140_ch_T0001174:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18767641	18769538	.	-	.	source_transcript=ENST00000729302.1;source_transcript_name=FAM224B-221;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729302.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729302.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729302.1;transcript_id=HG00140_ch_T0001174;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001174;transcript_name=HG00140_ch_T0001174;gene_name=FAM224B;ID=intron:HG00140_ch_T0001174:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18769539	18769716	.	-	.	source_transcript=ENST00000729302.1;source_transcript_name=FAM224B-221;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729302.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729302.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729302.1;transcript_id=HG00140_ch_T0001174;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001174;transcript_name=HG00140_ch_T0001174;gene_name=FAM224B;ID=exon:HG00140_ch_T0001174:3;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	18765044	18769725	1000	-	.	source_transcript=ENST00000729303.1;source_transcript_name=FAM224B-222;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729303.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729303.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729303.1;transcript_id=HG00140_ch_T0001175;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_G0000382;transcript_name=HG00140_ch_T0001175;gene_name=FAM224B;ID=HG00140_ch_T0001175;Name=FAM224B
HG00140_chrY	CAT	exon	18765044	18765235	.	-	.	source_transcript=ENST00000729303.1;source_transcript_name=FAM224B-222;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729303.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729303.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729303.1;transcript_id=HG00140_ch_T0001175;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001175;transcript_name=HG00140_ch_T0001175;gene_name=FAM224B;ID=exon:HG00140_ch_T0001175:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18765236	18766570	.	-	.	source_transcript=ENST00000729303.1;source_transcript_name=FAM224B-222;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729303.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729303.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729303.1;transcript_id=HG00140_ch_T0001175;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001175;transcript_name=HG00140_ch_T0001175;gene_name=FAM224B;ID=intron:HG00140_ch_T0001175:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18766571	18766688	.	-	.	source_transcript=ENST00000729303.1;source_transcript_name=FAM224B-222;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729303.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729303.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729303.1;transcript_id=HG00140_ch_T0001175;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001175;transcript_name=HG00140_ch_T0001175;gene_name=FAM224B;ID=exon:HG00140_ch_T0001175:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18766689	18769188	.	-	.	source_transcript=ENST00000729303.1;source_transcript_name=FAM224B-222;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729303.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729303.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729303.1;transcript_id=HG00140_ch_T0001175;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001175;transcript_name=HG00140_ch_T0001175;gene_name=FAM224B;ID=intron:HG00140_ch_T0001175:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18769189	18769324	.	-	.	source_transcript=ENST00000729303.1;source_transcript_name=FAM224B-222;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729303.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729303.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729303.1;transcript_id=HG00140_ch_T0001175;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001175;transcript_name=HG00140_ch_T0001175;gene_name=FAM224B;ID=exon:HG00140_ch_T0001175:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18769325	18769538	.	-	.	source_transcript=ENST00000729303.1;source_transcript_name=FAM224B-222;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729303.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729303.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729303.1;transcript_id=HG00140_ch_T0001175;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001175;transcript_name=HG00140_ch_T0001175;gene_name=FAM224B;ID=intron:HG00140_ch_T0001175:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18769539	18769725	.	-	.	source_transcript=ENST00000729303.1;source_transcript_name=FAM224B-222;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729303.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729303.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729303.1;transcript_id=HG00140_ch_T0001175;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001175;transcript_name=HG00140_ch_T0001175;gene_name=FAM224B;ID=exon:HG00140_ch_T0001175:3;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	18765048	18769736	1000	-	.	source_transcript=ENST00000729301.1;source_transcript_name=FAM224B-220;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729301.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729301.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729301.1;transcript_id=HG00140_ch_T0001176;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_G0000382;transcript_name=HG00140_ch_T0001176;gene_name=FAM224B;ID=HG00140_ch_T0001176;Name=FAM224B
HG00140_chrY	CAT	exon	18765048	18765235	.	-	.	source_transcript=ENST00000729301.1;source_transcript_name=FAM224B-220;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729301.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729301.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729301.1;transcript_id=HG00140_ch_T0001176;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001176;transcript_name=HG00140_ch_T0001176;gene_name=FAM224B;ID=exon:HG00140_ch_T0001176:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18765236	18766570	.	-	.	source_transcript=ENST00000729301.1;source_transcript_name=FAM224B-220;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729301.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729301.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729301.1;transcript_id=HG00140_ch_T0001176;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001176;transcript_name=HG00140_ch_T0001176;gene_name=FAM224B;ID=intron:HG00140_ch_T0001176:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18766571	18766688	.	-	.	source_transcript=ENST00000729301.1;source_transcript_name=FAM224B-220;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729301.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729301.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729301.1;transcript_id=HG00140_ch_T0001176;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001176;transcript_name=HG00140_ch_T0001176;gene_name=FAM224B;ID=exon:HG00140_ch_T0001176:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18766689	18767542	.	-	.	source_transcript=ENST00000729301.1;source_transcript_name=FAM224B-220;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729301.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729301.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729301.1;transcript_id=HG00140_ch_T0001176;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001176;transcript_name=HG00140_ch_T0001176;gene_name=FAM224B;ID=intron:HG00140_ch_T0001176:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18767543	18767640	.	-	.	source_transcript=ENST00000729301.1;source_transcript_name=FAM224B-220;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729301.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729301.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729301.1;transcript_id=HG00140_ch_T0001176;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001176;transcript_name=HG00140_ch_T0001176;gene_name=FAM224B;ID=exon:HG00140_ch_T0001176:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18767641	18769188	.	-	.	source_transcript=ENST00000729301.1;source_transcript_name=FAM224B-220;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729301.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729301.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729301.1;transcript_id=HG00140_ch_T0001176;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001176;transcript_name=HG00140_ch_T0001176;gene_name=FAM224B;ID=intron:HG00140_ch_T0001176:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18769189	18769348	.	-	.	source_transcript=ENST00000729301.1;source_transcript_name=FAM224B-220;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729301.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729301.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729301.1;transcript_id=HG00140_ch_T0001176;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001176;transcript_name=HG00140_ch_T0001176;gene_name=FAM224B;ID=exon:HG00140_ch_T0001176:3;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18769349	18769538	.	-	.	source_transcript=ENST00000729301.1;source_transcript_name=FAM224B-220;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729301.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729301.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729301.1;transcript_id=HG00140_ch_T0001176;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001176;transcript_name=HG00140_ch_T0001176;gene_name=FAM224B;ID=intron:HG00140_ch_T0001176:3;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18769539	18769736	.	-	.	source_transcript=ENST00000729301.1;source_transcript_name=FAM224B-220;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729301.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729301.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729301.1;transcript_id=HG00140_ch_T0001176;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001176;transcript_name=HG00140_ch_T0001176;gene_name=FAM224B;ID=exon:HG00140_ch_T0001176:4;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	18765048	18769677	1000	-	.	source_transcript=ENST00000729308.1;source_transcript_name=FAM224B-227;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729308.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729308.1;transcript_id=HG00140_ch_T0001177;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_G0000382;transcript_name=HG00140_ch_T0001177;gene_name=FAM224B;ID=HG00140_ch_T0001177;Name=FAM224B
HG00140_chrY	CAT	exon	18765048	18765235	.	-	.	source_transcript=ENST00000729308.1;source_transcript_name=FAM224B-227;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729308.1;transcript_id=HG00140_ch_T0001177;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001177;transcript_name=HG00140_ch_T0001177;gene_name=FAM224B;ID=exon:HG00140_ch_T0001177:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18765236	18766570	.	-	.	source_transcript=ENST00000729308.1;source_transcript_name=FAM224B-227;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729308.1;transcript_id=HG00140_ch_T0001177;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001177;transcript_name=HG00140_ch_T0001177;gene_name=FAM224B;ID=intron:HG00140_ch_T0001177:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18766571	18766688	.	-	.	source_transcript=ENST00000729308.1;source_transcript_name=FAM224B-227;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729308.1;transcript_id=HG00140_ch_T0001177;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001177;transcript_name=HG00140_ch_T0001177;gene_name=FAM224B;ID=exon:HG00140_ch_T0001177:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18766689	18769188	.	-	.	source_transcript=ENST00000729308.1;source_transcript_name=FAM224B-227;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729308.1;transcript_id=HG00140_ch_T0001177;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001177;transcript_name=HG00140_ch_T0001177;gene_name=FAM224B;ID=intron:HG00140_ch_T0001177:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18769189	18769310	.	-	.	source_transcript=ENST00000729308.1;source_transcript_name=FAM224B-227;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729308.1;transcript_id=HG00140_ch_T0001177;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001177;transcript_name=HG00140_ch_T0001177;gene_name=FAM224B;ID=exon:HG00140_ch_T0001177:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18769311	18769538	.	-	.	source_transcript=ENST00000729308.1;source_transcript_name=FAM224B-227;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729308.1;transcript_id=HG00140_ch_T0001177;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001177;transcript_name=HG00140_ch_T0001177;gene_name=FAM224B;ID=intron:HG00140_ch_T0001177:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18769539	18769677	.	-	.	source_transcript=ENST00000729308.1;source_transcript_name=FAM224B-227;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729308.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729308.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729308.1;transcript_id=HG00140_ch_T0001177;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001177;transcript_name=HG00140_ch_T0001177;gene_name=FAM224B;ID=exon:HG00140_ch_T0001177:3;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	18765050	18769641	1000	-	.	source_transcript=ENST00000729311.1;source_transcript_name=FAM224B-230;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729311.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729311.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729311.1;transcript_id=HG00140_ch_T0001178;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_G0000382;transcript_name=HG00140_ch_T0001178;gene_name=FAM224B;ID=HG00140_ch_T0001178;Name=FAM224B
HG00140_chrY	CAT	exon	18765050	18765235	.	-	.	source_transcript=ENST00000729311.1;source_transcript_name=FAM224B-230;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729311.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729311.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729311.1;transcript_id=HG00140_ch_T0001178;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001178;transcript_name=HG00140_ch_T0001178;gene_name=FAM224B;ID=exon:HG00140_ch_T0001178:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18765236	18769188	.	-	.	source_transcript=ENST00000729311.1;source_transcript_name=FAM224B-230;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729311.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729311.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729311.1;transcript_id=HG00140_ch_T0001178;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001178;transcript_name=HG00140_ch_T0001178;gene_name=FAM224B;ID=intron:HG00140_ch_T0001178:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18769189	18769641	.	-	.	source_transcript=ENST00000729311.1;source_transcript_name=FAM224B-230;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729311.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729311.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729311.1;transcript_id=HG00140_ch_T0001178;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001178;transcript_name=HG00140_ch_T0001178;gene_name=FAM224B;ID=exon:HG00140_ch_T0001178:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	18765052	18769731	1000	-	.	source_transcript=ENST00000729304.1;source_transcript_name=FAM224B-223;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729304.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729304.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729304.1;transcript_id=HG00140_ch_T0001179;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_G0000382;transcript_name=HG00140_ch_T0001179;gene_name=FAM224B;ID=HG00140_ch_T0001179;Name=FAM224B
HG00140_chrY	CAT	exon	18765052	18765235	.	-	.	source_transcript=ENST00000729304.1;source_transcript_name=FAM224B-223;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729304.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729304.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729304.1;transcript_id=HG00140_ch_T0001179;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001179;transcript_name=HG00140_ch_T0001179;gene_name=FAM224B;ID=exon:HG00140_ch_T0001179:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18765236	18766570	.	-	.	source_transcript=ENST00000729304.1;source_transcript_name=FAM224B-223;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729304.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729304.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729304.1;transcript_id=HG00140_ch_T0001179;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001179;transcript_name=HG00140_ch_T0001179;gene_name=FAM224B;ID=intron:HG00140_ch_T0001179:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18766571	18766688	.	-	.	source_transcript=ENST00000729304.1;source_transcript_name=FAM224B-223;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729304.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729304.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729304.1;transcript_id=HG00140_ch_T0001179;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001179;transcript_name=HG00140_ch_T0001179;gene_name=FAM224B;ID=exon:HG00140_ch_T0001179:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18766689	18767542	.	-	.	source_transcript=ENST00000729304.1;source_transcript_name=FAM224B-223;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729304.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729304.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729304.1;transcript_id=HG00140_ch_T0001179;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001179;transcript_name=HG00140_ch_T0001179;gene_name=FAM224B;ID=intron:HG00140_ch_T0001179:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18767543	18767640	.	-	.	source_transcript=ENST00000729304.1;source_transcript_name=FAM224B-223;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729304.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729304.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729304.1;transcript_id=HG00140_ch_T0001179;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001179;transcript_name=HG00140_ch_T0001179;gene_name=FAM224B;ID=exon:HG00140_ch_T0001179:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18767641	18769188	.	-	.	source_transcript=ENST00000729304.1;source_transcript_name=FAM224B-223;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729304.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729304.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729304.1;transcript_id=HG00140_ch_T0001179;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001179;transcript_name=HG00140_ch_T0001179;gene_name=FAM224B;ID=intron:HG00140_ch_T0001179:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18769189	18769731	.	-	.	source_transcript=ENST00000729304.1;source_transcript_name=FAM224B-223;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729304.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729304.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729304.1;transcript_id=HG00140_ch_T0001179;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001179;transcript_name=HG00140_ch_T0001179;gene_name=FAM224B;ID=exon:HG00140_ch_T0001179:3;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	18765052	18769684	1000	-	.	source_transcript=ENST00000729307.1;source_transcript_name=FAM224B-226;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729307.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729307.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729307.1;transcript_id=HG00140_ch_T0001180;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_G0000382;transcript_name=HG00140_ch_T0001180;gene_name=FAM224B;ID=HG00140_ch_T0001180;Name=FAM224B
HG00140_chrY	CAT	exon	18765052	18765235	.	-	.	source_transcript=ENST00000729307.1;source_transcript_name=FAM224B-226;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729307.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729307.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729307.1;transcript_id=HG00140_ch_T0001180;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001180;transcript_name=HG00140_ch_T0001180;gene_name=FAM224B;ID=exon:HG00140_ch_T0001180:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18765236	18766570	.	-	.	source_transcript=ENST00000729307.1;source_transcript_name=FAM224B-226;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729307.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729307.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729307.1;transcript_id=HG00140_ch_T0001180;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001180;transcript_name=HG00140_ch_T0001180;gene_name=FAM224B;ID=intron:HG00140_ch_T0001180:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18766571	18767640	.	-	.	source_transcript=ENST00000729307.1;source_transcript_name=FAM224B-226;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729307.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729307.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729307.1;transcript_id=HG00140_ch_T0001180;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001180;transcript_name=HG00140_ch_T0001180;gene_name=FAM224B;ID=exon:HG00140_ch_T0001180:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18767641	18769188	.	-	.	source_transcript=ENST00000729307.1;source_transcript_name=FAM224B-226;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729307.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729307.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729307.1;transcript_id=HG00140_ch_T0001180;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001180;transcript_name=HG00140_ch_T0001180;gene_name=FAM224B;ID=intron:HG00140_ch_T0001180:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18769189	18769348	.	-	.	source_transcript=ENST00000729307.1;source_transcript_name=FAM224B-226;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729307.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729307.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729307.1;transcript_id=HG00140_ch_T0001180;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001180;transcript_name=HG00140_ch_T0001180;gene_name=FAM224B;ID=exon:HG00140_ch_T0001180:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18769349	18769538	.	-	.	source_transcript=ENST00000729307.1;source_transcript_name=FAM224B-226;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729307.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729307.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729307.1;transcript_id=HG00140_ch_T0001180;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001180;transcript_name=HG00140_ch_T0001180;gene_name=FAM224B;ID=intron:HG00140_ch_T0001180:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18769539	18769684	.	-	.	source_transcript=ENST00000729307.1;source_transcript_name=FAM224B-226;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729307.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729307.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729307.1;transcript_id=HG00140_ch_T0001180;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001180;transcript_name=HG00140_ch_T0001180;gene_name=FAM224B;ID=exon:HG00140_ch_T0001180:3;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	18765052	18769679	1000	-	.	source_transcript=ENST00000729309.1;source_transcript_name=FAM224B-228;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729309.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729309.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729309.1;transcript_id=HG00140_ch_T0001181;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_G0000382;transcript_name=HG00140_ch_T0001181;gene_name=FAM224B;ID=HG00140_ch_T0001181;Name=FAM224B
HG00140_chrY	CAT	exon	18765052	18765235	.	-	.	source_transcript=ENST00000729309.1;source_transcript_name=FAM224B-228;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729309.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729309.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729309.1;transcript_id=HG00140_ch_T0001181;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001181;transcript_name=HG00140_ch_T0001181;gene_name=FAM224B;ID=exon:HG00140_ch_T0001181:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18765236	18769188	.	-	.	source_transcript=ENST00000729309.1;source_transcript_name=FAM224B-228;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729309.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729309.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729309.1;transcript_id=HG00140_ch_T0001181;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001181;transcript_name=HG00140_ch_T0001181;gene_name=FAM224B;ID=intron:HG00140_ch_T0001181:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18769189	18769348	.	-	.	source_transcript=ENST00000729309.1;source_transcript_name=FAM224B-228;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729309.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729309.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729309.1;transcript_id=HG00140_ch_T0001181;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001181;transcript_name=HG00140_ch_T0001181;gene_name=FAM224B;ID=exon:HG00140_ch_T0001181:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18769349	18769538	.	-	.	source_transcript=ENST00000729309.1;source_transcript_name=FAM224B-228;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729309.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729309.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729309.1;transcript_id=HG00140_ch_T0001181;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001181;transcript_name=HG00140_ch_T0001181;gene_name=FAM224B;ID=intron:HG00140_ch_T0001181:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18769539	18769679	.	-	.	source_transcript=ENST00000729309.1;source_transcript_name=FAM224B-228;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729309.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729309.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729309.1;transcript_id=HG00140_ch_T0001181;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001181;transcript_name=HG00140_ch_T0001181;gene_name=FAM224B;ID=exon:HG00140_ch_T0001181:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	18765052	18769678	1000	-	.	source_transcript=ENST00000729310.1;source_transcript_name=FAM224B-229;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729310.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729310.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729310.1;transcript_id=HG00140_ch_T0001182;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_G0000382;transcript_name=HG00140_ch_T0001182;gene_name=FAM224B;ID=HG00140_ch_T0001182;Name=FAM224B
HG00140_chrY	CAT	exon	18765052	18765235	.	-	.	source_transcript=ENST00000729310.1;source_transcript_name=FAM224B-229;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729310.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729310.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729310.1;transcript_id=HG00140_ch_T0001182;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001182;transcript_name=HG00140_ch_T0001182;gene_name=FAM224B;ID=exon:HG00140_ch_T0001182:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18765236	18766570	.	-	.	source_transcript=ENST00000729310.1;source_transcript_name=FAM224B-229;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729310.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729310.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729310.1;transcript_id=HG00140_ch_T0001182;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001182;transcript_name=HG00140_ch_T0001182;gene_name=FAM224B;ID=intron:HG00140_ch_T0001182:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18766571	18766660	.	-	.	source_transcript=ENST00000729310.1;source_transcript_name=FAM224B-229;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729310.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729310.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729310.1;transcript_id=HG00140_ch_T0001182;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001182;transcript_name=HG00140_ch_T0001182;gene_name=FAM224B;ID=exon:HG00140_ch_T0001182:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18766661	18769188	.	-	.	source_transcript=ENST00000729310.1;source_transcript_name=FAM224B-229;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729310.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729310.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729310.1;transcript_id=HG00140_ch_T0001182;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001182;transcript_name=HG00140_ch_T0001182;gene_name=FAM224B;ID=intron:HG00140_ch_T0001182:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18769189	18769422	.	-	.	source_transcript=ENST00000729310.1;source_transcript_name=FAM224B-229;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729310.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729310.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729310.1;transcript_id=HG00140_ch_T0001182;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001182;transcript_name=HG00140_ch_T0001182;gene_name=FAM224B;ID=exon:HG00140_ch_T0001182:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18769423	18769538	.	-	.	source_transcript=ENST00000729310.1;source_transcript_name=FAM224B-229;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729310.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729310.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729310.1;transcript_id=HG00140_ch_T0001182;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001182;transcript_name=HG00140_ch_T0001182;gene_name=FAM224B;ID=intron:HG00140_ch_T0001182:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18769539	18769678	.	-	.	source_transcript=ENST00000729310.1;source_transcript_name=FAM224B-229;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729310.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729310.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729310.1;transcript_id=HG00140_ch_T0001182;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001182;transcript_name=HG00140_ch_T0001182;gene_name=FAM224B;ID=exon:HG00140_ch_T0001182:3;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	18766273	18769679	1000	-	.	source_transcript=ENST00000729312.1;source_transcript_name=FAM224B-231;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729312.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729312.1;transcript_id=HG00140_ch_T0001183;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_G0000382;transcript_name=HG00140_ch_T0001183;gene_name=FAM224B;ID=HG00140_ch_T0001183;Name=FAM224B
HG00140_chrY	CAT	exon	18766273	18766531	.	-	.	source_transcript=ENST00000729312.1;source_transcript_name=FAM224B-231;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729312.1;transcript_id=HG00140_ch_T0001183;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001183;transcript_name=HG00140_ch_T0001183;gene_name=FAM224B;ID=exon:HG00140_ch_T0001183:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18766532	18769188	.	-	.	source_transcript=ENST00000729312.1;source_transcript_name=FAM224B-231;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729312.1;transcript_id=HG00140_ch_T0001183;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001183;transcript_name=HG00140_ch_T0001183;gene_name=FAM224B;ID=intron:HG00140_ch_T0001183:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18769189	18769679	.	-	.	source_transcript=ENST00000729312.1;source_transcript_name=FAM224B-231;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729312.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729312.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729312.1;transcript_id=HG00140_ch_T0001183;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001183;transcript_name=HG00140_ch_T0001183;gene_name=FAM224B;ID=exon:HG00140_ch_T0001183:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	18767604	18769729	1000	-	.	source_transcript=ENST00000729313.1;source_transcript_name=FAM224B-232;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729313.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729313.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729313.1;transcript_id=HG00140_ch_T0001184;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_G0000382;transcript_name=HG00140_ch_T0001184;gene_name=FAM224B;ID=HG00140_ch_T0001184;Name=FAM224B
HG00140_chrY	CAT	exon	18767604	18767640	.	-	.	source_transcript=ENST00000729313.1;source_transcript_name=FAM224B-232;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729313.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729313.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729313.1;transcript_id=HG00140_ch_T0001184;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001184;transcript_name=HG00140_ch_T0001184;gene_name=FAM224B;ID=exon:HG00140_ch_T0001184:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18767641	18768760	.	-	.	source_transcript=ENST00000729313.1;source_transcript_name=FAM224B-232;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729313.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729313.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729313.1;transcript_id=HG00140_ch_T0001184;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001184;transcript_name=HG00140_ch_T0001184;gene_name=FAM224B;ID=intron:HG00140_ch_T0001184:0;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18768761	18768957	.	-	.	source_transcript=ENST00000729313.1;source_transcript_name=FAM224B-232;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729313.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729313.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729313.1;transcript_id=HG00140_ch_T0001184;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001184;transcript_name=HG00140_ch_T0001184;gene_name=FAM224B;ID=exon:HG00140_ch_T0001184:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18768958	18769538	.	-	.	source_transcript=ENST00000729313.1;source_transcript_name=FAM224B-232;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729313.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729313.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729313.1;transcript_id=HG00140_ch_T0001184;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001184;transcript_name=HG00140_ch_T0001184;gene_name=FAM224B;ID=intron:HG00140_ch_T0001184:1;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18769539	18769729	.	-	.	source_transcript=ENST00000729313.1;source_transcript_name=FAM224B-232;source_gene=ENSG00000230663.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000230663.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729313.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729313.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;alternative_source_transcripts=ENST00000729313.1;transcript_id=HG00140_ch_T0001184;gene_id=HG00140_ch_G0000382;Parent=HG00140_ch_T0001184;transcript_name=HG00140_ch_T0001184;gene_name=FAM224B;ID=exon:HG00140_ch_T0001184:2;Name=FAM224B;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	18747731	18747843	.	+	.	source_gene_common_name=RNA5SP523;source_gene=ENSG00000252667.1;alternative_source_transcripts=ENST00000516506.1;gene_id=HG00140_ch_G0000383;gene_biotype=rRNA_pseudogene;gene_name=RNA5SP523;gene_sources=liftoff;ID=HG00140_ch_G0000383;Name=RNA5SP523
HG00140_chrY	CAT	transcript	18747731	18747843	1000	+	.	source_transcript=ENST00000516858.1;source_transcript_name=RNA5SP523-201;source_gene=ENSG00000252667.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000252667.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000516858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516858.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP523;alternative_source_transcripts=ENST00000516506.1;transcript_id=HG00140_ch_T0001164;gene_id=HG00140_ch_G0000383;Parent=HG00140_ch_G0000383;transcript_name=HG00140_ch_T0001164;gene_name=RNA5SP523;ID=HG00140_ch_T0001164;Name=RNA5SP523
HG00140_chrY	CAT	exon	18747731	18747843	.	+	.	source_transcript=ENST00000516858.1;source_transcript_name=RNA5SP523-201;source_gene=ENSG00000252667.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000252667.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000516858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516858.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP523;alternative_source_transcripts=ENST00000516506.1;transcript_id=HG00140_ch_T0001164;gene_id=HG00140_ch_G0000383;Parent=HG00140_ch_T0001164;transcript_name=HG00140_ch_T0001164;gene_name=RNA5SP523;ID=exon:HG00140_ch_T0001164:0;Name=RNA5SP523;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	18749641	18749756	.	+	.	source_gene_common_name=RNA5SP522;source_gene=ENSG00000251953.1;alternative_source_transcripts=ENST00000516203.1;gene_id=HG00140_ch_G0000384;gene_biotype=rRNA_pseudogene;gene_name=RNA5SP522;gene_sources=liftoff;ID=HG00140_ch_G0000384;Name=RNA5SP522
HG00140_chrY	CAT	transcript	18749641	18749756	1000	+	.	source_transcript=ENST00000516144.1;source_transcript_name=RNA5SP522-201;source_gene=ENSG00000251953.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000251953.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000516144.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516144.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP522;alternative_source_transcripts=ENST00000516203.1;transcript_id=HG00140_ch_T0001165;gene_id=HG00140_ch_G0000384;Parent=HG00140_ch_G0000384;transcript_name=HG00140_ch_T0001165;gene_name=RNA5SP522;ID=HG00140_ch_T0001165;Name=RNA5SP522
HG00140_chrY	CAT	exon	18749641	18749756	.	+	.	source_transcript=ENST00000516144.1;source_transcript_name=RNA5SP522-201;source_gene=ENSG00000251953.1;source_gene_biotype=rRNA_pseudogene;original_gene_id=ENSG00000251953.1;gene_biotype=rRNA_pseudogene;transcript_biotype=rRNA_pseudogene;alignment_id=ENST00000516144.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516144.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNA5SP522;alternative_source_transcripts=ENST00000516203.1;transcript_id=HG00140_ch_T0001165;gene_id=HG00140_ch_G0000384;Parent=HG00140_ch_T0001165;transcript_name=HG00140_ch_T0001165;gene_name=RNA5SP522;ID=exon:HG00140_ch_T0001165:0;Name=RNA5SP522;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	18758830	18758919	.	-	.	source_gene_common_name=ENSG00000273966;source_gene=ENSG00000273966.1;alternative_source_transcripts=ENST00000615048.1;gene_id=HG00140_ch_G0000385;gene_biotype=misc_RNA;gene_name=ENSG00000273966;gene_sources=liftoff;ID=HG00140_ch_G0000385;Name=ENSG00000273966
HG00140_chrY	CAT	transcript	18758830	18758919	1000	-	.	source_transcript=ENST00000615048.1;source_transcript_name=ENST00000615048;source_gene=ENSG00000273966.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000273966.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000615048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615048.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273966;alternative_source_transcripts=ENST00000615048.1;transcript_id=HG00140_ch_T0001166;gene_id=HG00140_ch_G0000385;Parent=HG00140_ch_G0000385;transcript_name=HG00140_ch_T0001166;gene_name=ENSG00000273966;ID=HG00140_ch_T0001166;Name=ENSG00000273966
HG00140_chrY	CAT	exon	18758830	18758919	.	-	.	source_transcript=ENST00000615048.1;source_transcript_name=ENST00000615048;source_gene=ENSG00000273966.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000273966.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000615048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615048.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273966;alternative_source_transcripts=ENST00000615048.1;transcript_id=HG00140_ch_T0001166;gene_id=HG00140_ch_G0000385;Parent=HG00140_ch_T0001166;transcript_name=HG00140_ch_T0001166;gene_name=ENSG00000273966;ID=exon:HG00140_ch_T0001166:0;Name=ENSG00000273966;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	18811121	18815694	.	-	.	source_gene_common_name=CLUHP2;source_gene=ENSG00000228945.3;gene_id=HG00140_ch_G0000386;gene_biotype=unprocessed_pseudogene;gene_name=CLUHP2;gene_sources=liftoff;ID=HG00140_ch_G0000386;Name=CLUHP2
HG00140_chrY	CAT	transcript	18811121	18815694	1000	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG00140_ch_T0001185;gene_id=HG00140_ch_G0000386;Parent=HG00140_ch_G0000386;transcript_name=HG00140_ch_T0001185;gene_name=CLUHP2;ID=HG00140_ch_T0001185;Name=CLUHP2
HG00140_chrY	CAT	exon	18811121	18811248	.	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG00140_ch_T0001185;gene_id=HG00140_ch_G0000386;Parent=HG00140_ch_T0001185;transcript_name=HG00140_ch_T0001185;gene_name=CLUHP2;ID=exon:HG00140_ch_T0001185:0;Name=CLUHP2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18811249	18811327	.	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG00140_ch_T0001185;gene_id=HG00140_ch_G0000386;Parent=HG00140_ch_T0001185;transcript_name=HG00140_ch_T0001185;gene_name=CLUHP2;ID=intron:HG00140_ch_T0001185:0;Name=CLUHP2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18811328	18811411	.	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG00140_ch_T0001185;gene_id=HG00140_ch_G0000386;Parent=HG00140_ch_T0001185;transcript_name=HG00140_ch_T0001185;gene_name=CLUHP2;ID=exon:HG00140_ch_T0001185:1;Name=CLUHP2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18811412	18811891	.	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG00140_ch_T0001185;gene_id=HG00140_ch_G0000386;Parent=HG00140_ch_T0001185;transcript_name=HG00140_ch_T0001185;gene_name=CLUHP2;ID=intron:HG00140_ch_T0001185:1;Name=CLUHP2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18811892	18811990	.	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG00140_ch_T0001185;gene_id=HG00140_ch_G0000386;Parent=HG00140_ch_T0001185;transcript_name=HG00140_ch_T0001185;gene_name=CLUHP2;ID=exon:HG00140_ch_T0001185:2;Name=CLUHP2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18811991	18812716	.	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG00140_ch_T0001185;gene_id=HG00140_ch_G0000386;Parent=HG00140_ch_T0001185;transcript_name=HG00140_ch_T0001185;gene_name=CLUHP2;ID=intron:HG00140_ch_T0001185:2;Name=CLUHP2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18812717	18812770	.	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG00140_ch_T0001185;gene_id=HG00140_ch_G0000386;Parent=HG00140_ch_T0001185;transcript_name=HG00140_ch_T0001185;gene_name=CLUHP2;ID=exon:HG00140_ch_T0001185:3;Name=CLUHP2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18812771	18813020	.	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG00140_ch_T0001185;gene_id=HG00140_ch_G0000386;Parent=HG00140_ch_T0001185;transcript_name=HG00140_ch_T0001185;gene_name=CLUHP2;ID=intron:HG00140_ch_T0001185:3;Name=CLUHP2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18813021	18813092	.	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG00140_ch_T0001185;gene_id=HG00140_ch_G0000386;Parent=HG00140_ch_T0001185;transcript_name=HG00140_ch_T0001185;gene_name=CLUHP2;ID=exon:HG00140_ch_T0001185:4;Name=CLUHP2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18813093	18813726	.	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG00140_ch_T0001185;gene_id=HG00140_ch_G0000386;Parent=HG00140_ch_T0001185;transcript_name=HG00140_ch_T0001185;gene_name=CLUHP2;ID=intron:HG00140_ch_T0001185:4;Name=CLUHP2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18813727	18813834	.	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG00140_ch_T0001185;gene_id=HG00140_ch_G0000386;Parent=HG00140_ch_T0001185;transcript_name=HG00140_ch_T0001185;gene_name=CLUHP2;ID=exon:HG00140_ch_T0001185:5;Name=CLUHP2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18813835	18813963	.	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG00140_ch_T0001185;gene_id=HG00140_ch_G0000386;Parent=HG00140_ch_T0001185;transcript_name=HG00140_ch_T0001185;gene_name=CLUHP2;ID=intron:HG00140_ch_T0001185:5;Name=CLUHP2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18813964	18814109	.	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG00140_ch_T0001185;gene_id=HG00140_ch_G0000386;Parent=HG00140_ch_T0001185;transcript_name=HG00140_ch_T0001185;gene_name=CLUHP2;ID=exon:HG00140_ch_T0001185:6;Name=CLUHP2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18814110	18814186	.	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG00140_ch_T0001185;gene_id=HG00140_ch_G0000386;Parent=HG00140_ch_T0001185;transcript_name=HG00140_ch_T0001185;gene_name=CLUHP2;ID=intron:HG00140_ch_T0001185:6;Name=CLUHP2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18814187	18814626	.	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG00140_ch_T0001185;gene_id=HG00140_ch_G0000386;Parent=HG00140_ch_T0001185;transcript_name=HG00140_ch_T0001185;gene_name=CLUHP2;ID=exon:HG00140_ch_T0001185:7;Name=CLUHP2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18814627	18815522	.	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG00140_ch_T0001185;gene_id=HG00140_ch_G0000386;Parent=HG00140_ch_T0001185;transcript_name=HG00140_ch_T0001185;gene_name=CLUHP2;ID=intron:HG00140_ch_T0001185:7;Name=CLUHP2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18815523	18815694	.	-	.	source_transcript=ENST00000426660.1;source_transcript_name=CLUHP2-201;source_gene=ENSG00000228945.3;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228945.3;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426660.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426660.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CLUHP2;transcript_id=HG00140_ch_T0001185;gene_id=HG00140_ch_G0000386;Parent=HG00140_ch_T0001185;transcript_name=HG00140_ch_T0001185;gene_name=CLUHP2;ID=exon:HG00140_ch_T0001185:8;Name=CLUHP2;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	18818377	18819266	.	+	.	source_gene_common_name=TAF9P1;source_gene=ENSG00000226353.1;alternative_source_transcripts=ENST00000445421.1;gene_id=HG00140_ch_G0000387;gene_biotype=processed_pseudogene;gene_name=TAF9P1;gene_sources=liftoff;ID=HG00140_ch_G0000387;Name=TAF9P1
HG00140_chrY	CAT	transcript	18818377	18819266	1000	+	.	source_transcript=ENST00000445421.1;source_transcript_name=TAF9P1-201;source_gene=ENSG00000226353.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226353.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445421.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445421.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAF9P1;alternative_source_transcripts=ENST00000445421.1;transcript_id=HG00140_ch_T0001186;gene_id=HG00140_ch_G0000387;Parent=HG00140_ch_G0000387;transcript_name=HG00140_ch_T0001186;gene_name=TAF9P1;ID=HG00140_ch_T0001186;Name=TAF9P1
HG00140_chrY	CAT	exon	18818377	18818849	.	+	.	source_transcript=ENST00000445421.1;source_transcript_name=TAF9P1-201;source_gene=ENSG00000226353.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226353.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445421.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445421.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAF9P1;alternative_source_transcripts=ENST00000445421.1;transcript_id=HG00140_ch_T0001186;gene_id=HG00140_ch_G0000387;Parent=HG00140_ch_T0001186;transcript_name=HG00140_ch_T0001186;gene_name=TAF9P1;ID=exon:HG00140_ch_T0001186:0;Name=TAF9P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18818850	18819224	.	+	.	source_transcript=ENST00000445421.1;source_transcript_name=TAF9P1-201;source_gene=ENSG00000226353.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226353.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445421.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445421.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAF9P1;alternative_source_transcripts=ENST00000445421.1;transcript_id=HG00140_ch_T0001186;gene_id=HG00140_ch_G0000387;Parent=HG00140_ch_T0001186;transcript_name=HG00140_ch_T0001186;gene_name=TAF9P1;ID=intron:HG00140_ch_T0001186:0;Name=TAF9P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18819225	18819266	.	+	.	source_transcript=ENST00000445421.1;source_transcript_name=TAF9P1-201;source_gene=ENSG00000226353.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226353.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445421.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445421.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TAF9P1;alternative_source_transcripts=ENST00000445421.1;transcript_id=HG00140_ch_T0001186;gene_id=HG00140_ch_G0000387;Parent=HG00140_ch_T0001186;transcript_name=HG00140_ch_T0001186;gene_name=TAF9P1;ID=exon:HG00140_ch_T0001186:1;Name=TAF9P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	18876116	18876724	.	-	.	source_gene_common_name=RAB9AP4;source_gene=ENSG00000235479.1;gene_id=HG00140_ch_G0000388;gene_biotype=unprocessed_pseudogene;gene_name=RAB9AP4;gene_sources=liftoff;ID=HG00140_ch_G0000388;Name=RAB9AP4
HG00140_chrY	CAT	transcript	18876116	18876724	1000	-	.	source_transcript=ENST00000415230.1;source_transcript_name=RAB9AP4-201;source_gene=ENSG00000235479.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235479.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415230.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP4;transcript_id=HG00140_ch_T0001187;gene_id=HG00140_ch_G0000388;Parent=HG00140_ch_G0000388;transcript_name=HG00140_ch_T0001187;gene_name=RAB9AP4;ID=HG00140_ch_T0001187;Name=RAB9AP4
HG00140_chrY	CAT	exon	18876116	18876724	.	-	.	source_transcript=ENST00000415230.1;source_transcript_name=RAB9AP4-201;source_gene=ENSG00000235479.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235479.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP4;transcript_id=HG00140_ch_T0001187;gene_id=HG00140_ch_G0000388;Parent=HG00140_ch_T0001187;transcript_name=HG00140_ch_T0001187;gene_name=RAB9AP4;ID=exon:HG00140_ch_T0001187:0;Name=RAB9AP4;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	18897307	18930098	.	-	.	source_gene_common_name=ENSG00000301107;source_gene=ENSG00000301107.1;gene_id=HG00140_ch_G0000389;gene_biotype=lncRNA;gene_name=ENSG00000301107;gene_sources=liftoff;ID=HG00140_ch_G0000389;Name=ENSG00000301107
HG00140_chrY	CAT	transcript	18897307	18930098	1000	-	.	source_transcript=ENST00000776238.1;source_transcript_name=ENST00000776238;source_gene=ENSG00000301107.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301107.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776238.1;transcript_score=157.143;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301107;transcript_id=HG00140_ch_T0001188;gene_id=HG00140_ch_G0000389;Parent=HG00140_ch_G0000389;transcript_name=HG00140_ch_T0001188;gene_name=ENSG00000301107;ID=HG00140_ch_T0001188;Name=ENSG00000301107
HG00140_chrY	CAT	exon	18897307	18897538	.	-	.	source_transcript=ENST00000776238.1;source_transcript_name=ENST00000776238;source_gene=ENSG00000301107.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301107.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776238.1;transcript_score=157.143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301107;transcript_id=HG00140_ch_T0001188;gene_id=HG00140_ch_G0000389;Parent=HG00140_ch_T0001188;transcript_name=HG00140_ch_T0001188;gene_name=ENSG00000301107;ID=exon:HG00140_ch_T0001188:0;Name=ENSG00000301107;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18897539	18906494	.	-	.	source_transcript=ENST00000776238.1;source_transcript_name=ENST00000776238;source_gene=ENSG00000301107.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301107.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776238.1;transcript_score=157.143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301107;transcript_id=HG00140_ch_T0001188;gene_id=HG00140_ch_G0000389;Parent=HG00140_ch_T0001188;transcript_name=HG00140_ch_T0001188;gene_name=ENSG00000301107;ID=intron:HG00140_ch_T0001188:0;Name=ENSG00000301107;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18906495	18906585	.	-	.	source_transcript=ENST00000776238.1;source_transcript_name=ENST00000776238;source_gene=ENSG00000301107.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301107.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776238.1;transcript_score=157.143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301107;transcript_id=HG00140_ch_T0001188;gene_id=HG00140_ch_G0000389;Parent=HG00140_ch_T0001188;transcript_name=HG00140_ch_T0001188;gene_name=ENSG00000301107;ID=exon:HG00140_ch_T0001188:1;Name=ENSG00000301107;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18906586	18930015	.	-	.	source_transcript=ENST00000776238.1;source_transcript_name=ENST00000776238;source_gene=ENSG00000301107.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301107.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776238.1;transcript_score=157.143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301107;transcript_id=HG00140_ch_T0001188;gene_id=HG00140_ch_G0000389;Parent=HG00140_ch_T0001188;transcript_name=HG00140_ch_T0001188;gene_name=ENSG00000301107;ID=intron:HG00140_ch_T0001188:1;Name=ENSG00000301107;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18930016	18930098	.	-	.	source_transcript=ENST00000776238.1;source_transcript_name=ENST00000776238;source_gene=ENSG00000301107.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301107.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776238.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776238.1;transcript_score=157.143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301107;transcript_id=HG00140_ch_T0001188;gene_id=HG00140_ch_G0000389;Parent=HG00140_ch_T0001188;transcript_name=HG00140_ch_T0001188;gene_name=ENSG00000301107;ID=exon:HG00140_ch_T0001188:2;Name=ENSG00000301107;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	18897323	18944341	.	+	.	source_gene_common_name=OFD1P5Y;source_gene=ENSG00000240438.2;gene_id=HG00140_ch_G0000390;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=OFD1P5Y;gene_sources=liftoff;ID=HG00140_ch_G0000390;Name=OFD1P5Y
HG00140_chrY	CAT	transcript	18897323	18944341	1000	+	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=214.65;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00140_ch_T0001189;gene_id=HG00140_ch_G0000390;Parent=HG00140_ch_G0000390;transcript_name=HG00140_ch_T0001189;gene_name=OFD1P5Y;ID=HG00140_ch_T0001189;Name=OFD1P5Y
HG00140_chrY	CAT	exon	18897323	18897427	.	+	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=214.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00140_ch_T0001189;gene_id=HG00140_ch_G0000390;Parent=HG00140_ch_T0001189;transcript_name=HG00140_ch_T0001189;gene_name=OFD1P5Y;ID=exon:HG00140_ch_T0001189:0;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18897428	18899243	.	+	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=214.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00140_ch_T0001189;gene_id=HG00140_ch_G0000390;Parent=HG00140_ch_T0001189;transcript_name=HG00140_ch_T0001189;gene_name=OFD1P5Y;ID=intron:HG00140_ch_T0001189:0;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18899244	18899380	.	+	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=214.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00140_ch_T0001189;gene_id=HG00140_ch_G0000390;Parent=HG00140_ch_T0001189;transcript_name=HG00140_ch_T0001189;gene_name=OFD1P5Y;ID=exon:HG00140_ch_T0001189:1;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18899381	18904162	.	+	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=214.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00140_ch_T0001189;gene_id=HG00140_ch_G0000390;Parent=HG00140_ch_T0001189;transcript_name=HG00140_ch_T0001189;gene_name=OFD1P5Y;ID=intron:HG00140_ch_T0001189:1;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18904163	18904334	.	+	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=214.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00140_ch_T0001189;gene_id=HG00140_ch_G0000390;Parent=HG00140_ch_T0001189;transcript_name=HG00140_ch_T0001189;gene_name=OFD1P5Y;ID=exon:HG00140_ch_T0001189:2;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18904335	18912121	.	+	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=214.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00140_ch_T0001189;gene_id=HG00140_ch_G0000390;Parent=HG00140_ch_T0001189;transcript_name=HG00140_ch_T0001189;gene_name=OFD1P5Y;ID=intron:HG00140_ch_T0001189:2;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18912122	18912206	.	+	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=214.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00140_ch_T0001189;gene_id=HG00140_ch_G0000390;Parent=HG00140_ch_T0001189;transcript_name=HG00140_ch_T0001189;gene_name=OFD1P5Y;ID=exon:HG00140_ch_T0001189:3;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18912207	18914011	.	+	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=214.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00140_ch_T0001189;gene_id=HG00140_ch_G0000390;Parent=HG00140_ch_T0001189;transcript_name=HG00140_ch_T0001189;gene_name=OFD1P5Y;ID=intron:HG00140_ch_T0001189:3;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18914012	18914162	.	+	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=214.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00140_ch_T0001189;gene_id=HG00140_ch_G0000390;Parent=HG00140_ch_T0001189;transcript_name=HG00140_ch_T0001189;gene_name=OFD1P5Y;ID=exon:HG00140_ch_T0001189:4;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18914163	18916959	.	+	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=214.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00140_ch_T0001189;gene_id=HG00140_ch_G0000390;Parent=HG00140_ch_T0001189;transcript_name=HG00140_ch_T0001189;gene_name=OFD1P5Y;ID=intron:HG00140_ch_T0001189:4;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18916960	18917066	.	+	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=214.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00140_ch_T0001189;gene_id=HG00140_ch_G0000390;Parent=HG00140_ch_T0001189;transcript_name=HG00140_ch_T0001189;gene_name=OFD1P5Y;ID=exon:HG00140_ch_T0001189:5;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18917067	18918818	.	+	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=214.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00140_ch_T0001189;gene_id=HG00140_ch_G0000390;Parent=HG00140_ch_T0001189;transcript_name=HG00140_ch_T0001189;gene_name=OFD1P5Y;ID=intron:HG00140_ch_T0001189:5;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18918819	18918946	.	+	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=214.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00140_ch_T0001189;gene_id=HG00140_ch_G0000390;Parent=HG00140_ch_T0001189;transcript_name=HG00140_ch_T0001189;gene_name=OFD1P5Y;ID=exon:HG00140_ch_T0001189:6;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18918947	18920582	.	+	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=214.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00140_ch_T0001189;gene_id=HG00140_ch_G0000390;Parent=HG00140_ch_T0001189;transcript_name=HG00140_ch_T0001189;gene_name=OFD1P5Y;ID=intron:HG00140_ch_T0001189:6;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18920583	18920656	.	+	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=214.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00140_ch_T0001189;gene_id=HG00140_ch_G0000390;Parent=HG00140_ch_T0001189;transcript_name=HG00140_ch_T0001189;gene_name=OFD1P5Y;ID=exon:HG00140_ch_T0001189:7;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18920657	18922244	.	+	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=214.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00140_ch_T0001189;gene_id=HG00140_ch_G0000390;Parent=HG00140_ch_T0001189;transcript_name=HG00140_ch_T0001189;gene_name=OFD1P5Y;ID=intron:HG00140_ch_T0001189:7;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18922245	18922380	.	+	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=214.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00140_ch_T0001189;gene_id=HG00140_ch_G0000390;Parent=HG00140_ch_T0001189;transcript_name=HG00140_ch_T0001189;gene_name=OFD1P5Y;ID=exon:HG00140_ch_T0001189:8;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18922381	18923247	.	+	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=214.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00140_ch_T0001189;gene_id=HG00140_ch_G0000390;Parent=HG00140_ch_T0001189;transcript_name=HG00140_ch_T0001189;gene_name=OFD1P5Y;ID=intron:HG00140_ch_T0001189:8;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18923248	18923377	.	+	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=214.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00140_ch_T0001189;gene_id=HG00140_ch_G0000390;Parent=HG00140_ch_T0001189;transcript_name=HG00140_ch_T0001189;gene_name=OFD1P5Y;ID=exon:HG00140_ch_T0001189:9;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18923378	18923911	.	+	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=214.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00140_ch_T0001189;gene_id=HG00140_ch_G0000390;Parent=HG00140_ch_T0001189;transcript_name=HG00140_ch_T0001189;gene_name=OFD1P5Y;ID=intron:HG00140_ch_T0001189:9;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18923912	18924023	.	+	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=214.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00140_ch_T0001189;gene_id=HG00140_ch_G0000390;Parent=HG00140_ch_T0001189;transcript_name=HG00140_ch_T0001189;gene_name=OFD1P5Y;ID=exon:HG00140_ch_T0001189:10;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18924024	18926070	.	+	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=214.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00140_ch_T0001189;gene_id=HG00140_ch_G0000390;Parent=HG00140_ch_T0001189;transcript_name=HG00140_ch_T0001189;gene_name=OFD1P5Y;ID=intron:HG00140_ch_T0001189:10;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18926071	18926697	.	+	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=214.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00140_ch_T0001189;gene_id=HG00140_ch_G0000390;Parent=HG00140_ch_T0001189;transcript_name=HG00140_ch_T0001189;gene_name=OFD1P5Y;ID=exon:HG00140_ch_T0001189:11;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18926698	18927072	.	+	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=214.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00140_ch_T0001189;gene_id=HG00140_ch_G0000390;Parent=HG00140_ch_T0001189;transcript_name=HG00140_ch_T0001189;gene_name=OFD1P5Y;ID=intron:HG00140_ch_T0001189:11;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18927073	18927184	.	+	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=214.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00140_ch_T0001189;gene_id=HG00140_ch_G0000390;Parent=HG00140_ch_T0001189;transcript_name=HG00140_ch_T0001189;gene_name=OFD1P5Y;ID=exon:HG00140_ch_T0001189:12;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18927185	18937697	.	+	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=214.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00140_ch_T0001189;gene_id=HG00140_ch_G0000390;Parent=HG00140_ch_T0001189;transcript_name=HG00140_ch_T0001189;gene_name=OFD1P5Y;ID=intron:HG00140_ch_T0001189:12;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18937698	18937798	.	+	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=214.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00140_ch_T0001189;gene_id=HG00140_ch_G0000390;Parent=HG00140_ch_T0001189;transcript_name=HG00140_ch_T0001189;gene_name=OFD1P5Y;ID=exon:HG00140_ch_T0001189:13;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18937799	18938855	.	+	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=214.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00140_ch_T0001189;gene_id=HG00140_ch_G0000390;Parent=HG00140_ch_T0001189;transcript_name=HG00140_ch_T0001189;gene_name=OFD1P5Y;ID=intron:HG00140_ch_T0001189:13;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18938856	18938992	.	+	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=214.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00140_ch_T0001189;gene_id=HG00140_ch_G0000390;Parent=HG00140_ch_T0001189;transcript_name=HG00140_ch_T0001189;gene_name=OFD1P5Y;ID=exon:HG00140_ch_T0001189:14;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18938993	18942343	.	+	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=214.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00140_ch_T0001189;gene_id=HG00140_ch_G0000390;Parent=HG00140_ch_T0001189;transcript_name=HG00140_ch_T0001189;gene_name=OFD1P5Y;ID=intron:HG00140_ch_T0001189:14;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18942344	18942494	.	+	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=214.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00140_ch_T0001189;gene_id=HG00140_ch_G0000390;Parent=HG00140_ch_T0001189;transcript_name=HG00140_ch_T0001189;gene_name=OFD1P5Y;ID=exon:HG00140_ch_T0001189:15;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18942495	18943683	.	+	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=214.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00140_ch_T0001189;gene_id=HG00140_ch_G0000390;Parent=HG00140_ch_T0001189;transcript_name=HG00140_ch_T0001189;gene_name=OFD1P5Y;ID=intron:HG00140_ch_T0001189:15;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18943684	18943750	.	+	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=214.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00140_ch_T0001189;gene_id=HG00140_ch_G0000390;Parent=HG00140_ch_T0001189;transcript_name=HG00140_ch_T0001189;gene_name=OFD1P5Y;ID=exon:HG00140_ch_T0001189:16;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18943751	18944047	.	+	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=214.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00140_ch_T0001189;gene_id=HG00140_ch_G0000390;Parent=HG00140_ch_T0001189;transcript_name=HG00140_ch_T0001189;gene_name=OFD1P5Y;ID=intron:HG00140_ch_T0001189:16;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18944048	18944341	.	+	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000447585.2;transcript_score=214.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00140_ch_T0001189;gene_id=HG00140_ch_G0000390;Parent=HG00140_ch_T0001189;transcript_name=HG00140_ch_T0001189;gene_name=OFD1P5Y;ID=exon:HG00140_ch_T0001189:17;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	18928293	18945198	.	+	.	source_gene_common_name=TTTY9B;source_gene=ENSG00000131007.10;gene_id=HG00140_ch_G0000391;gene_biotype=lncRNA;gene_name=TTTY9B;gene_sources=liftoff;ID=HG00140_ch_G0000391;Name=TTTY9B
HG00140_chrY	CAT	transcript	18928293	18936450	1000	+	.	source_transcript=ENST00000776413.1;source_transcript_name=TTTY9B-203;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776413.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776413.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG00140_ch_T0001190;gene_id=HG00140_ch_G0000391;Parent=HG00140_ch_G0000391;transcript_name=HG00140_ch_T0001190;gene_name=TTTY9B;ID=HG00140_ch_T0001190;Name=TTTY9B
HG00140_chrY	CAT	exon	18928293	18928549	.	+	.	source_transcript=ENST00000776413.1;source_transcript_name=TTTY9B-203;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776413.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776413.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG00140_ch_T0001190;gene_id=HG00140_ch_G0000391;Parent=HG00140_ch_T0001190;transcript_name=HG00140_ch_T0001190;gene_name=TTTY9B;ID=exon:HG00140_ch_T0001190:0;Name=TTTY9B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18928550	18928730	.	+	.	source_transcript=ENST00000776413.1;source_transcript_name=TTTY9B-203;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776413.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776413.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG00140_ch_T0001190;gene_id=HG00140_ch_G0000391;Parent=HG00140_ch_T0001190;transcript_name=HG00140_ch_T0001190;gene_name=TTTY9B;ID=intron:HG00140_ch_T0001190:0;Name=TTTY9B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18928731	18928992	.	+	.	source_transcript=ENST00000776413.1;source_transcript_name=TTTY9B-203;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776413.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776413.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG00140_ch_T0001190;gene_id=HG00140_ch_G0000391;Parent=HG00140_ch_T0001190;transcript_name=HG00140_ch_T0001190;gene_name=TTTY9B;ID=exon:HG00140_ch_T0001190:1;Name=TTTY9B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18928993	18935804	.	+	.	source_transcript=ENST00000776413.1;source_transcript_name=TTTY9B-203;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776413.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776413.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG00140_ch_T0001190;gene_id=HG00140_ch_G0000391;Parent=HG00140_ch_T0001190;transcript_name=HG00140_ch_T0001190;gene_name=TTTY9B;ID=intron:HG00140_ch_T0001190:1;Name=TTTY9B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18935805	18936450	.	+	.	source_transcript=ENST00000776413.1;source_transcript_name=TTTY9B-203;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776413.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000776413.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG00140_ch_T0001190;gene_id=HG00140_ch_G0000391;Parent=HG00140_ch_T0001190;transcript_name=HG00140_ch_T0001190;gene_name=TTTY9B;ID=exon:HG00140_ch_T0001190:2;Name=TTTY9B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	18935883	18945198	1000	+	.	source_transcript=ENST00000433794.5;source_transcript_name=TTTY9B-201;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433794.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433794.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=ENST00000432335.1;transcript_id=HG00140_ch_T0001191;gene_id=HG00140_ch_G0000391;Parent=HG00140_ch_G0000391;transcript_name=HG00140_ch_T0001191;gene_name=TTTY9B;ID=HG00140_ch_T0001191;Name=TTTY9B
HG00140_chrY	CAT	exon	18935883	18936024	.	+	.	source_transcript=ENST00000433794.5;source_transcript_name=TTTY9B-201;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433794.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433794.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=ENST00000432335.1;transcript_id=HG00140_ch_T0001191;gene_id=HG00140_ch_G0000391;Parent=HG00140_ch_T0001191;transcript_name=HG00140_ch_T0001191;gene_name=TTTY9B;ID=exon:HG00140_ch_T0001191:0;Name=TTTY9B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18936025	18937697	.	+	.	source_transcript=ENST00000433794.5;source_transcript_name=TTTY9B-201;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433794.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433794.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=ENST00000432335.1;transcript_id=HG00140_ch_T0001191;gene_id=HG00140_ch_G0000391;Parent=HG00140_ch_T0001191;transcript_name=HG00140_ch_T0001191;gene_name=TTTY9B;ID=intron:HG00140_ch_T0001191:0;Name=TTTY9B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18937698	18937798	.	+	.	source_transcript=ENST00000433794.5;source_transcript_name=TTTY9B-201;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433794.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433794.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=ENST00000432335.1;transcript_id=HG00140_ch_T0001191;gene_id=HG00140_ch_G0000391;Parent=HG00140_ch_T0001191;transcript_name=HG00140_ch_T0001191;gene_name=TTTY9B;ID=exon:HG00140_ch_T0001191:1;Name=TTTY9B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18937799	18938159	.	+	.	source_transcript=ENST00000433794.5;source_transcript_name=TTTY9B-201;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433794.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433794.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=ENST00000432335.1;transcript_id=HG00140_ch_T0001191;gene_id=HG00140_ch_G0000391;Parent=HG00140_ch_T0001191;transcript_name=HG00140_ch_T0001191;gene_name=TTTY9B;ID=intron:HG00140_ch_T0001191:1;Name=TTTY9B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18938160	18938273	.	+	.	source_transcript=ENST00000433794.5;source_transcript_name=TTTY9B-201;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433794.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433794.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=ENST00000432335.1;transcript_id=HG00140_ch_T0001191;gene_id=HG00140_ch_G0000391;Parent=HG00140_ch_T0001191;transcript_name=HG00140_ch_T0001191;gene_name=TTTY9B;ID=exon:HG00140_ch_T0001191:2;Name=TTTY9B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18938274	18938855	.	+	.	source_transcript=ENST00000433794.5;source_transcript_name=TTTY9B-201;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433794.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433794.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=ENST00000432335.1;transcript_id=HG00140_ch_T0001191;gene_id=HG00140_ch_G0000391;Parent=HG00140_ch_T0001191;transcript_name=HG00140_ch_T0001191;gene_name=TTTY9B;ID=intron:HG00140_ch_T0001191:2;Name=TTTY9B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18938856	18938992	.	+	.	source_transcript=ENST00000433794.5;source_transcript_name=TTTY9B-201;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433794.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433794.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=ENST00000432335.1;transcript_id=HG00140_ch_T0001191;gene_id=HG00140_ch_G0000391;Parent=HG00140_ch_T0001191;transcript_name=HG00140_ch_T0001191;gene_name=TTTY9B;ID=exon:HG00140_ch_T0001191:3;Name=TTTY9B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18938993	18944055	.	+	.	source_transcript=ENST00000433794.5;source_transcript_name=TTTY9B-201;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433794.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433794.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=ENST00000432335.1;transcript_id=HG00140_ch_T0001191;gene_id=HG00140_ch_G0000391;Parent=HG00140_ch_T0001191;transcript_name=HG00140_ch_T0001191;gene_name=TTTY9B;ID=intron:HG00140_ch_T0001191:3;Name=TTTY9B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18944056	18945198	.	+	.	source_transcript=ENST00000433794.5;source_transcript_name=TTTY9B-201;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000433794.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000433794.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=ENST00000432335.1;transcript_id=HG00140_ch_T0001191;gene_id=HG00140_ch_G0000391;Parent=HG00140_ch_T0001191;transcript_name=HG00140_ch_T0001191;gene_name=TTTY9B;ID=exon:HG00140_ch_T0001191:4;Name=TTTY9B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	18937692	18945198	1000	+	.	source_transcript=ENST00000545582.2;source_transcript_name=TTTY9B-202;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000545582.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000545582.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG00140_ch_T0001194;gene_id=HG00140_ch_G0000391;Parent=HG00140_ch_G0000391;transcript_name=HG00140_ch_T0001194;gene_name=TTTY9B;ID=HG00140_ch_T0001194;Name=TTTY9B
HG00140_chrY	CAT	exon	18937692	18937798	.	+	.	source_transcript=ENST00000545582.2;source_transcript_name=TTTY9B-202;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000545582.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000545582.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG00140_ch_T0001194;gene_id=HG00140_ch_G0000391;Parent=HG00140_ch_T0001194;transcript_name=HG00140_ch_T0001194;gene_name=TTTY9B;ID=exon:HG00140_ch_T0001194:0;Name=TTTY9B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18937799	18938159	.	+	.	source_transcript=ENST00000545582.2;source_transcript_name=TTTY9B-202;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000545582.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000545582.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG00140_ch_T0001194;gene_id=HG00140_ch_G0000391;Parent=HG00140_ch_T0001194;transcript_name=HG00140_ch_T0001194;gene_name=TTTY9B;ID=intron:HG00140_ch_T0001194:0;Name=TTTY9B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18938160	18938273	.	+	.	source_transcript=ENST00000545582.2;source_transcript_name=TTTY9B-202;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000545582.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000545582.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG00140_ch_T0001194;gene_id=HG00140_ch_G0000391;Parent=HG00140_ch_T0001194;transcript_name=HG00140_ch_T0001194;gene_name=TTTY9B;ID=exon:HG00140_ch_T0001194:1;Name=TTTY9B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18938274	18938855	.	+	.	source_transcript=ENST00000545582.2;source_transcript_name=TTTY9B-202;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000545582.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000545582.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG00140_ch_T0001194;gene_id=HG00140_ch_G0000391;Parent=HG00140_ch_T0001194;transcript_name=HG00140_ch_T0001194;gene_name=TTTY9B;ID=intron:HG00140_ch_T0001194:1;Name=TTTY9B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18938856	18938992	.	+	.	source_transcript=ENST00000545582.2;source_transcript_name=TTTY9B-202;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000545582.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000545582.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG00140_ch_T0001194;gene_id=HG00140_ch_G0000391;Parent=HG00140_ch_T0001194;transcript_name=HG00140_ch_T0001194;gene_name=TTTY9B;ID=exon:HG00140_ch_T0001194:2;Name=TTTY9B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18938993	18944055	.	+	.	source_transcript=ENST00000545582.2;source_transcript_name=TTTY9B-202;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000545582.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000545582.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG00140_ch_T0001194;gene_id=HG00140_ch_G0000391;Parent=HG00140_ch_T0001194;transcript_name=HG00140_ch_T0001194;gene_name=TTTY9B;ID=intron:HG00140_ch_T0001194:2;Name=TTTY9B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18944056	18945198	.	+	.	source_transcript=ENST00000545582.2;source_transcript_name=TTTY9B-202;source_gene=ENSG00000131007.10;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131007.10;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000545582.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000545582.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;transcript_id=HG00140_ch_T0001194;gene_id=HG00140_ch_G0000391;Parent=HG00140_ch_T0001194;transcript_name=HG00140_ch_T0001194;gene_name=TTTY9B;ID=exon:HG00140_ch_T0001194:3;Name=TTTY9B;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	18937441	18979760	.	-	.	source_gene_common_name=HSFY2;source_gene=ENSG00000169953.12;alternative_source_transcripts=ENST00000344884.4;gene_id=HG00140_ch_G0000392;gene_biotype=protein_coding;gene_name=HSFY2;gene_sources=liftoff;ID=HG00140_ch_G0000392;Name=HSFY2
HG00140_chrY	CAT	transcript	18937441	18979740	100	-	.	source_transcript=ENST00000344884.4;source_transcript_name=HSFY2-202;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000344884.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344884.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000344884.4;transcript_id=HG00140_ch_T0001192;gene_id=HG00140_ch_G0000392;Parent=HG00140_ch_G0000392;transcript_name=HG00140_ch_T0001192;gene_name=HSFY2;ID=HG00140_ch_T0001192;Name=HSFY2
HG00140_chrY	CAT	exon	18937441	18937868	.	-	.	source_transcript=ENST00000344884.4;source_transcript_name=HSFY2-202;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000344884.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344884.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000344884.4;transcript_id=HG00140_ch_T0001192;gene_id=HG00140_ch_G0000392;Parent=HG00140_ch_T0001192;transcript_name=HG00140_ch_T0001192;gene_name=HSFY2;ID=exon:HG00140_ch_T0001192:0;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	18937770	18937868	.	-	0	source_transcript=ENST00000344884.4;source_transcript_name=HSFY2-202;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000344884.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344884.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000344884.4;transcript_id=HG00140_ch_T0001192;gene_id=HG00140_ch_G0000392;Parent=HG00140_ch_T0001192;transcript_name=HG00140_ch_T0001192;gene_name=HSFY2;ID=CDS:HG00140_ch_T0001192:0;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	18937770	18937772	.	-	0	source_transcript=ENST00000344884.4;source_transcript_name=HSFY2-202;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000344884.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344884.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000344884.4;transcript_id=HG00140_ch_T0001192;gene_id=HG00140_ch_G0000392;Parent=HG00140_ch_T0001192;transcript_name=HG00140_ch_T0001192;gene_name=HSFY2;ID=stop_codon:HG00140_ch_T0001192;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18937869	18979130	.	-	.	source_transcript=ENST00000344884.4;source_transcript_name=HSFY2-202;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000344884.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344884.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000344884.4;transcript_id=HG00140_ch_T0001192;gene_id=HG00140_ch_G0000392;Parent=HG00140_ch_T0001192;transcript_name=HG00140_ch_T0001192;gene_name=HSFY2;ID=intron:HG00140_ch_T0001192:0;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18979131	18979740	.	-	.	source_transcript=ENST00000344884.4;source_transcript_name=HSFY2-202;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000344884.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344884.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000344884.4;transcript_id=HG00140_ch_T0001192;gene_id=HG00140_ch_G0000392;Parent=HG00140_ch_T0001192;transcript_name=HG00140_ch_T0001192;gene_name=HSFY2;ID=exon:HG00140_ch_T0001192:1;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	18979131	18979643	.	-	0	source_transcript=ENST00000344884.4;source_transcript_name=HSFY2-202;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000344884.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344884.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000344884.4;transcript_id=HG00140_ch_T0001192;gene_id=HG00140_ch_G0000392;Parent=HG00140_ch_T0001192;transcript_name=HG00140_ch_T0001192;gene_name=HSFY2;ID=CDS:HG00140_ch_T0001192:1;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	18979641	18979643	.	-	0	source_transcript=ENST00000344884.4;source_transcript_name=HSFY2-202;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000344884.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344884.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000344884.4;transcript_id=HG00140_ch_T0001192;gene_id=HG00140_ch_G0000392;Parent=HG00140_ch_T0001192;transcript_name=HG00140_ch_T0001192;gene_name=HSFY2;ID=start_codon:HG00140_ch_T0001192;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	18937441	18979740	1000	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1;transcript_id=HG00140_ch_T0001193;gene_id=HG00140_ch_G0000392;Parent=HG00140_ch_G0000392;transcript_name=HG00140_ch_T0001193;gene_name=HSFY2;ID=HG00140_ch_T0001193;Name=HSFY2
HG00140_chrY	CAT	exon	18937441	18937868	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1;transcript_id=HG00140_ch_T0001193;gene_id=HG00140_ch_G0000392;Parent=HG00140_ch_T0001193;transcript_name=HG00140_ch_T0001193;gene_name=HSFY2;ID=exon:HG00140_ch_T0001193:0;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18937869	18943645	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1;transcript_id=HG00140_ch_T0001193;gene_id=HG00140_ch_G0000392;Parent=HG00140_ch_T0001193;transcript_name=HG00140_ch_T0001193;gene_name=HSFY2;ID=intron:HG00140_ch_T0001193:0;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18943646	18943731	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1;transcript_id=HG00140_ch_T0001193;gene_id=HG00140_ch_G0000392;Parent=HG00140_ch_T0001193;transcript_name=HG00140_ch_T0001193;gene_name=HSFY2;ID=exon:HG00140_ch_T0001193:1;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18943732	18974355	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1;transcript_id=HG00140_ch_T0001193;gene_id=HG00140_ch_G0000392;Parent=HG00140_ch_T0001193;transcript_name=HG00140_ch_T0001193;gene_name=HSFY2;ID=intron:HG00140_ch_T0001193:1;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18974356	18974510	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1;transcript_id=HG00140_ch_T0001193;gene_id=HG00140_ch_G0000392;Parent=HG00140_ch_T0001193;transcript_name=HG00140_ch_T0001193;gene_name=HSFY2;ID=exon:HG00140_ch_T0001193:2;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18974511	18975557	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1;transcript_id=HG00140_ch_T0001193;gene_id=HG00140_ch_G0000392;Parent=HG00140_ch_T0001193;transcript_name=HG00140_ch_T0001193;gene_name=HSFY2;ID=intron:HG00140_ch_T0001193:2;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18975558	18975644	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1;transcript_id=HG00140_ch_T0001193;gene_id=HG00140_ch_G0000392;Parent=HG00140_ch_T0001193;transcript_name=HG00140_ch_T0001193;gene_name=HSFY2;ID=exon:HG00140_ch_T0001193:3;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18975645	18976207	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1;transcript_id=HG00140_ch_T0001193;gene_id=HG00140_ch_G0000392;Parent=HG00140_ch_T0001193;transcript_name=HG00140_ch_T0001193;gene_name=HSFY2;ID=intron:HG00140_ch_T0001193:3;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18976208	18976317	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1;transcript_id=HG00140_ch_T0001193;gene_id=HG00140_ch_G0000392;Parent=HG00140_ch_T0001193;transcript_name=HG00140_ch_T0001193;gene_name=HSFY2;ID=exon:HG00140_ch_T0001193:4;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18976318	18979130	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1;transcript_id=HG00140_ch_T0001193;gene_id=HG00140_ch_G0000392;Parent=HG00140_ch_T0001193;transcript_name=HG00140_ch_T0001193;gene_name=HSFY2;ID=intron:HG00140_ch_T0001193:4;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18979131	18979740	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000491902.1;transcript_id=HG00140_ch_T0001193;gene_id=HG00140_ch_G0000392;Parent=HG00140_ch_T0001193;transcript_name=HG00140_ch_T0001193;gene_name=HSFY2;ID=exon:HG00140_ch_T0001193:5;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	18974946	18979711	100	-	.	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1;transcript_id=HG00140_ch_T0001196;gene_id=HG00140_ch_G0000392;Parent=HG00140_ch_G0000392;transcript_name=HG00140_ch_T0001196;gene_name=HSFY2;ID=HG00140_ch_T0001196;Name=HSFY2
HG00140_chrY	CAT	exon	18974946	18975644	.	-	.	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1;transcript_id=HG00140_ch_T0001196;gene_id=HG00140_ch_G0000392;Parent=HG00140_ch_T0001196;transcript_name=HG00140_ch_T0001196;gene_name=HSFY2;ID=exon:HG00140_ch_T0001196:0;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	18975623	18975644	.	-	1	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1;transcript_id=HG00140_ch_T0001196;gene_id=HG00140_ch_G0000392;Parent=HG00140_ch_T0001196;transcript_name=HG00140_ch_T0001196;gene_name=HSFY2;ID=CDS:HG00140_ch_T0001196:0;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	18975623	18975625	.	-	0	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1;transcript_id=HG00140_ch_T0001196;gene_id=HG00140_ch_G0000392;Parent=HG00140_ch_T0001196;transcript_name=HG00140_ch_T0001196;gene_name=HSFY2;ID=stop_codon:HG00140_ch_T0001196;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18975645	18976207	.	-	.	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1;transcript_id=HG00140_ch_T0001196;gene_id=HG00140_ch_G0000392;Parent=HG00140_ch_T0001196;transcript_name=HG00140_ch_T0001196;gene_name=HSFY2;ID=intron:HG00140_ch_T0001196:0;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18976208	18976317	.	-	.	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1;transcript_id=HG00140_ch_T0001196;gene_id=HG00140_ch_G0000392;Parent=HG00140_ch_T0001196;transcript_name=HG00140_ch_T0001196;gene_name=HSFY2;ID=exon:HG00140_ch_T0001196:1;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	18976208	18976317	.	-	0	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1;transcript_id=HG00140_ch_T0001196;gene_id=HG00140_ch_G0000392;Parent=HG00140_ch_T0001196;transcript_name=HG00140_ch_T0001196;gene_name=HSFY2;ID=CDS:HG00140_ch_T0001196:1;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18976318	18979130	.	-	.	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1;transcript_id=HG00140_ch_T0001196;gene_id=HG00140_ch_G0000392;Parent=HG00140_ch_T0001196;transcript_name=HG00140_ch_T0001196;gene_name=HSFY2;ID=intron:HG00140_ch_T0001196:1;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18979131	18979711	.	-	.	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1;transcript_id=HG00140_ch_T0001196;gene_id=HG00140_ch_G0000392;Parent=HG00140_ch_T0001196;transcript_name=HG00140_ch_T0001196;gene_name=HSFY2;ID=exon:HG00140_ch_T0001196:2;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	18979131	18979643	.	-	0	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1;transcript_id=HG00140_ch_T0001196;gene_id=HG00140_ch_G0000392;Parent=HG00140_ch_T0001196;transcript_name=HG00140_ch_T0001196;gene_name=HSFY2;ID=CDS:HG00140_ch_T0001196:2;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	18979641	18979643	.	-	0	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000382852.1;transcript_id=HG00140_ch_T0001196;gene_id=HG00140_ch_G0000392;Parent=HG00140_ch_T0001196;transcript_name=HG00140_ch_T0001196;gene_name=HSFY2;ID=start_codon:HG00140_ch_T0001196;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	18977839	18979760	100	-	.	source_transcript=ENST00000304790.3;source_transcript_name=HSFY2-201;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000304790.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000304790.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000304790.3;transcript_id=HG00140_ch_T0001197;gene_id=HG00140_ch_G0000392;Parent=HG00140_ch_G0000392;transcript_name=HG00140_ch_T0001197;gene_name=HSFY2;ID=HG00140_ch_T0001197;Name=HSFY2
HG00140_chrY	CAT	exon	18977839	18978652	.	-	.	source_transcript=ENST00000304790.3;source_transcript_name=HSFY2-201;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000304790.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000304790.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000304790.3;transcript_id=HG00140_ch_T0001197;gene_id=HG00140_ch_G0000392;Parent=HG00140_ch_T0001197;transcript_name=HG00140_ch_T0001197;gene_name=HSFY2;ID=exon:HG00140_ch_T0001197:0;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	18977960	18978652	.	-	0	source_transcript=ENST00000304790.3;source_transcript_name=HSFY2-201;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000304790.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000304790.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000304790.3;transcript_id=HG00140_ch_T0001197;gene_id=HG00140_ch_G0000392;Parent=HG00140_ch_T0001197;transcript_name=HG00140_ch_T0001197;gene_name=HSFY2;ID=CDS:HG00140_ch_T0001197:0;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	18977960	18977962	.	-	0	source_transcript=ENST00000304790.3;source_transcript_name=HSFY2-201;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000304790.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000304790.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000304790.3;transcript_id=HG00140_ch_T0001197;gene_id=HG00140_ch_G0000392;Parent=HG00140_ch_T0001197;transcript_name=HG00140_ch_T0001197;gene_name=HSFY2;ID=stop_codon:HG00140_ch_T0001197;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18978653	18979130	.	-	.	source_transcript=ENST00000304790.3;source_transcript_name=HSFY2-201;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000304790.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000304790.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000304790.3;transcript_id=HG00140_ch_T0001197;gene_id=HG00140_ch_G0000392;Parent=HG00140_ch_T0001197;transcript_name=HG00140_ch_T0001197;gene_name=HSFY2;ID=intron:HG00140_ch_T0001197:0;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18979131	18979760	.	-	.	source_transcript=ENST00000304790.3;source_transcript_name=HSFY2-201;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000304790.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000304790.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000304790.3;transcript_id=HG00140_ch_T0001197;gene_id=HG00140_ch_G0000392;Parent=HG00140_ch_T0001197;transcript_name=HG00140_ch_T0001197;gene_name=HSFY2;ID=exon:HG00140_ch_T0001197:1;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	18979131	18979643	.	-	0	source_transcript=ENST00000304790.3;source_transcript_name=HSFY2-201;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000304790.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000304790.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000304790.3;transcript_id=HG00140_ch_T0001197;gene_id=HG00140_ch_G0000392;Parent=HG00140_ch_T0001197;transcript_name=HG00140_ch_T0001197;gene_name=HSFY2;ID=CDS:HG00140_ch_T0001197:1;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	18979641	18979643	.	-	0	source_transcript=ENST00000304790.3;source_transcript_name=HSFY2-201;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000304790.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000304790.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=ENST00000304790.3;transcript_id=HG00140_ch_T0001197;gene_id=HG00140_ch_G0000392;Parent=HG00140_ch_T0001197;transcript_name=HG00140_ch_T0001197;gene_name=HSFY2;ID=start_codon:HG00140_ch_T0001197;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	18947844	18947987	.	-	.	source_gene_common_name=GPM6BP2;source_gene=ENSG00000236429.1;alternative_source_transcripts=ENST00000432046.1;gene_id=HG00140_ch_G0000393;gene_biotype=unprocessed_pseudogene;gene_name=GPM6BP2;gene_sources=liftoff;ID=HG00140_ch_G0000393;Name=GPM6BP2
HG00140_chrY	CAT	transcript	18947844	18947987	1000	-	.	source_transcript=ENST00000432046.1;source_transcript_name=GPM6BP2-201;source_gene=ENSG00000236429.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236429.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432046.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GPM6BP2;alternative_source_transcripts=ENST00000432046.1;transcript_id=HG00140_ch_T0001195;gene_id=HG00140_ch_G0000393;Parent=HG00140_ch_G0000393;transcript_name=HG00140_ch_T0001195;gene_name=GPM6BP2;ID=HG00140_ch_T0001195;Name=GPM6BP2
HG00140_chrY	CAT	exon	18947844	18947987	.	-	.	source_transcript=ENST00000432046.1;source_transcript_name=GPM6BP2-201;source_gene=ENSG00000236429.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236429.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432046.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GPM6BP2;alternative_source_transcripts=ENST00000432046.1;transcript_id=HG00140_ch_T0001195;gene_id=HG00140_ch_G0000393;Parent=HG00140_ch_T0001195;transcript_name=HG00140_ch_T0001195;gene_name=GPM6BP2;ID=exon:HG00140_ch_T0001195:0;Name=GPM6BP2;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	18982304	18985452	.	-	.	source_gene_common_name=USP9YP1;source_gene=ENSG00000250951.1;gene_id=HG00140_ch_G0000394;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP1;gene_sources=liftoff;ID=HG00140_ch_G0000394;Name=USP9YP1
HG00140_chrY	CAT	transcript	18982304	18985452	1000	-	.	source_transcript=ENST00000513521.1;source_transcript_name=USP9YP1-201;source_gene=ENSG00000250951.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000250951.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000513521.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000513521.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP1;transcript_id=HG00140_ch_T0001198;gene_id=HG00140_ch_G0000394;Parent=HG00140_ch_G0000394;transcript_name=HG00140_ch_T0001198;gene_name=USP9YP1;ID=HG00140_ch_T0001198;Name=USP9YP1
HG00140_chrY	CAT	exon	18982304	18982428	.	-	.	source_transcript=ENST00000513521.1;source_transcript_name=USP9YP1-201;source_gene=ENSG00000250951.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000250951.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000513521.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000513521.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP1;transcript_id=HG00140_ch_T0001198;gene_id=HG00140_ch_G0000394;Parent=HG00140_ch_T0001198;transcript_name=HG00140_ch_T0001198;gene_name=USP9YP1;ID=exon:HG00140_ch_T0001198:0;Name=USP9YP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18982429	18982839	.	-	.	source_transcript=ENST00000513521.1;source_transcript_name=USP9YP1-201;source_gene=ENSG00000250951.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000250951.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000513521.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000513521.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP1;transcript_id=HG00140_ch_T0001198;gene_id=HG00140_ch_G0000394;Parent=HG00140_ch_T0001198;transcript_name=HG00140_ch_T0001198;gene_name=USP9YP1;ID=intron:HG00140_ch_T0001198:0;Name=USP9YP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18982840	18983586	.	-	.	source_transcript=ENST00000513521.1;source_transcript_name=USP9YP1-201;source_gene=ENSG00000250951.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000250951.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000513521.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000513521.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP1;transcript_id=HG00140_ch_T0001198;gene_id=HG00140_ch_G0000394;Parent=HG00140_ch_T0001198;transcript_name=HG00140_ch_T0001198;gene_name=USP9YP1;ID=exon:HG00140_ch_T0001198:1;Name=USP9YP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	18983587	18985322	.	-	.	source_transcript=ENST00000513521.1;source_transcript_name=USP9YP1-201;source_gene=ENSG00000250951.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000250951.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000513521.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000513521.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP1;transcript_id=HG00140_ch_T0001198;gene_id=HG00140_ch_G0000394;Parent=HG00140_ch_T0001198;transcript_name=HG00140_ch_T0001198;gene_name=USP9YP1;ID=intron:HG00140_ch_T0001198:1;Name=USP9YP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	18985323	18985452	.	-	.	source_transcript=ENST00000513521.1;source_transcript_name=USP9YP1-201;source_gene=ENSG00000250951.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000250951.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000513521.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000513521.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP1;transcript_id=HG00140_ch_T0001198;gene_id=HG00140_ch_G0000394;Parent=HG00140_ch_T0001198;transcript_name=HG00140_ch_T0001198;gene_name=USP9YP1;ID=exon:HG00140_ch_T0001198:2;Name=USP9YP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	18993775	18994105	.	+	.	source_gene_common_name=ELOCP14;source_gene=ENSG00000228193.1;alternative_source_transcripts=ENST00000428070.1,ENST00000428070.1;gene_id=HG00140_ch_G0000395;gene_biotype=processed_pseudogene;gene_name=ELOCP14;gene_sources=liftoff;ID=HG00140_ch_G0000395;Name=ELOCP14
HG00140_chrY	CAT	transcript	18993775	18994105	1000	+	.	source_transcript=ENST00000428070.1;source_transcript_name=ELOCP14-201;source_gene=ENSG00000228193.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228193.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428070.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428070.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP14;alternative_source_transcripts=ENST00000428070.1,ENST00000428070.1;transcript_id=HG00140_ch_T0001199;gene_id=HG00140_ch_G0000395;Parent=HG00140_ch_G0000395;transcript_name=HG00140_ch_T0001199;gene_name=ELOCP14;ID=HG00140_ch_T0001199;Name=ELOCP14
HG00140_chrY	CAT	exon	18993775	18994105	.	+	.	source_transcript=ENST00000428070.1;source_transcript_name=ELOCP14-201;source_gene=ENSG00000228193.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228193.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428070.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428070.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP14;alternative_source_transcripts=ENST00000428070.1,ENST00000428070.1;transcript_id=HG00140_ch_T0001199;gene_id=HG00140_ch_G0000395;Parent=HG00140_ch_T0001199;transcript_name=HG00140_ch_T0001199;gene_name=ELOCP14;ID=exon:HG00140_ch_T0001199:0;Name=ELOCP14;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	19017363	19017854	.	-	.	source_gene_common_name=XKRYP2;source_gene=ENSG00000230904.1;alternative_source_transcripts=ENST00000432915.1,ENST00000432915.1;gene_id=HG00140_ch_G0000396;gene_biotype=unprocessed_pseudogene;gene_name=XKRYP2;gene_sources=liftoff;ID=HG00140_ch_G0000396;Name=XKRYP2
HG00140_chrY	CAT	transcript	19017363	19017854	1000	-	.	source_transcript=ENST00000432915.1;source_transcript_name=XKRYP2-201;source_gene=ENSG00000230904.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230904.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432915.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432915.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP2;alternative_source_transcripts=ENST00000432915.1,ENST00000432915.1;transcript_id=HG00140_ch_T0001200;gene_id=HG00140_ch_G0000396;Parent=HG00140_ch_G0000396;transcript_name=HG00140_ch_T0001200;gene_name=XKRYP2;ID=HG00140_ch_T0001200;Name=XKRYP2
HG00140_chrY	CAT	exon	19017363	19017854	.	-	.	source_transcript=ENST00000432915.1;source_transcript_name=XKRYP2-201;source_gene=ENSG00000230904.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230904.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000432915.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432915.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP2;alternative_source_transcripts=ENST00000432915.1,ENST00000432915.1;transcript_id=HG00140_ch_T0001200;gene_id=HG00140_ch_G0000396;Parent=HG00140_ch_T0001200;transcript_name=HG00140_ch_T0001200;gene_name=XKRYP2;ID=exon:HG00140_ch_T0001200:0;Name=XKRYP2;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	19032128	19035500	.	+	.	source_gene_common_name=USP9YP5;source_gene=ENSG00000249634.1;gene_id=HG00140_ch_G0000397;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP5;gene_sources=liftoff;ID=HG00140_ch_G0000397;Name=USP9YP5
HG00140_chrY	CAT	transcript	19032128	19035500	1000	+	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000511770.1;transcript_score=299.366;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;transcript_id=HG00140_ch_T0001201;gene_id=HG00140_ch_G0000397;Parent=HG00140_ch_G0000397;transcript_name=HG00140_ch_T0001201;gene_name=USP9YP5;ID=HG00140_ch_T0001201;Name=USP9YP5
HG00140_chrY	CAT	exon	19032128	19032348	.	+	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000511770.1;transcript_score=299.366;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;transcript_id=HG00140_ch_T0001201;gene_id=HG00140_ch_G0000397;Parent=HG00140_ch_T0001201;transcript_name=HG00140_ch_T0001201;gene_name=USP9YP5;ID=exon:HG00140_ch_T0001201:0;Name=USP9YP5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19032349	19033117	.	+	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000511770.1;transcript_score=299.366;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;transcript_id=HG00140_ch_T0001201;gene_id=HG00140_ch_G0000397;Parent=HG00140_ch_T0001201;transcript_name=HG00140_ch_T0001201;gene_name=USP9YP5;ID=intron:HG00140_ch_T0001201:0;Name=USP9YP5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19033118	19033242	.	+	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000511770.1;transcript_score=299.366;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;transcript_id=HG00140_ch_T0001201;gene_id=HG00140_ch_G0000397;Parent=HG00140_ch_T0001201;transcript_name=HG00140_ch_T0001201;gene_name=USP9YP5;ID=exon:HG00140_ch_T0001201:1;Name=USP9YP5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19033243	19033312	.	+	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000511770.1;transcript_score=299.366;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;transcript_id=HG00140_ch_T0001201;gene_id=HG00140_ch_G0000397;Parent=HG00140_ch_T0001201;transcript_name=HG00140_ch_T0001201;gene_name=USP9YP5;ID=intron:HG00140_ch_T0001201:1;Name=USP9YP5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19033313	19033405	.	+	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000511770.1;transcript_score=299.366;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;transcript_id=HG00140_ch_T0001201;gene_id=HG00140_ch_G0000397;Parent=HG00140_ch_T0001201;transcript_name=HG00140_ch_T0001201;gene_name=USP9YP5;ID=exon:HG00140_ch_T0001201:2;Name=USP9YP5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19033406	19035309	.	+	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000511770.1;transcript_score=299.366;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;transcript_id=HG00140_ch_T0001201;gene_id=HG00140_ch_G0000397;Parent=HG00140_ch_T0001201;transcript_name=HG00140_ch_T0001201;gene_name=USP9YP5;ID=intron:HG00140_ch_T0001201:2;Name=USP9YP5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19035310	19035500	.	+	.	source_transcript=ENST00000511770.1;source_transcript_name=USP9YP5-201;source_gene=ENSG00000249634.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249634.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000511770.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000511770.1;transcript_score=299.366;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP5;transcript_id=HG00140_ch_T0001201;gene_id=HG00140_ch_G0000397;Parent=HG00140_ch_T0001201;transcript_name=HG00140_ch_T0001201;gene_name=USP9YP5;ID=exon:HG00140_ch_T0001201:3;Name=USP9YP5;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	19039753	19039914	.	-	.	source_gene_common_name=RNU1-41P;source_gene=ENSG00000251970.1;gene_id=HG00140_ch_G0000398;gene_biotype=snRNA;gene_name=RNU1-41P;gene_sources=liftoff;ID=HG00140_ch_G0000398;Name=RNU1-41P
HG00140_chrY	CAT	transcript	19039753	19039914	1000	-	.	source_transcript=ENST00000516161.1;source_transcript_name=RNU1-41P-201;source_gene=ENSG00000251970.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000251970.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516161.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-41P;transcript_id=HG00140_ch_T0001202;gene_id=HG00140_ch_G0000398;Parent=HG00140_ch_G0000398;transcript_name=HG00140_ch_T0001202;gene_name=RNU1-41P;ID=HG00140_ch_T0001202;Name=RNU1-41P
HG00140_chrY	CAT	exon	19039753	19039914	.	-	.	source_transcript=ENST00000516161.1;source_transcript_name=RNU1-41P-201;source_gene=ENSG00000251970.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000251970.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516161.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516161.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-41P;transcript_id=HG00140_ch_T0001202;gene_id=HG00140_ch_G0000398;Parent=HG00140_ch_T0001202;transcript_name=HG00140_ch_T0001202;gene_name=RNU1-41P;ID=exon:HG00140_ch_T0001202:0;Name=RNU1-41P;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	19042188	19046178	.	-	.	source_gene_common_name=ENSG00000307031;source_gene=ENSG00000307031.1;gene_id=HG00140_ch_G0000399;gene_biotype=lncRNA;gene_name=ENSG00000307031;gene_sources=liftoff;ID=HG00140_ch_G0000399;Name=ENSG00000307031
HG00140_chrY	CAT	transcript	19042188	19046178	1000	-	.	source_transcript=ENST00000823008.1;source_transcript_name=ENST00000823008;source_gene=ENSG00000307031.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307031.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000823008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000823008.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307031;transcript_id=HG00140_ch_T0001203;gene_id=HG00140_ch_G0000399;Parent=HG00140_ch_G0000399;transcript_name=HG00140_ch_T0001203;gene_name=ENSG00000307031;ID=HG00140_ch_T0001203;Name=ENSG00000307031
HG00140_chrY	CAT	exon	19042188	19042429	.	-	.	source_transcript=ENST00000823008.1;source_transcript_name=ENST00000823008;source_gene=ENSG00000307031.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307031.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000823008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000823008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307031;transcript_id=HG00140_ch_T0001203;gene_id=HG00140_ch_G0000399;Parent=HG00140_ch_T0001203;transcript_name=HG00140_ch_T0001203;gene_name=ENSG00000307031;ID=exon:HG00140_ch_T0001203:0;Name=ENSG00000307031;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19042430	19045206	.	-	.	source_transcript=ENST00000823008.1;source_transcript_name=ENST00000823008;source_gene=ENSG00000307031.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307031.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000823008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000823008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307031;transcript_id=HG00140_ch_T0001203;gene_id=HG00140_ch_G0000399;Parent=HG00140_ch_T0001203;transcript_name=HG00140_ch_T0001203;gene_name=ENSG00000307031;ID=intron:HG00140_ch_T0001203:0;Name=ENSG00000307031;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19045207	19045338	.	-	.	source_transcript=ENST00000823008.1;source_transcript_name=ENST00000823008;source_gene=ENSG00000307031.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307031.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000823008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000823008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307031;transcript_id=HG00140_ch_T0001203;gene_id=HG00140_ch_G0000399;Parent=HG00140_ch_T0001203;transcript_name=HG00140_ch_T0001203;gene_name=ENSG00000307031;ID=exon:HG00140_ch_T0001203:1;Name=ENSG00000307031;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19045339	19045956	.	-	.	source_transcript=ENST00000823008.1;source_transcript_name=ENST00000823008;source_gene=ENSG00000307031.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307031.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000823008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000823008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307031;transcript_id=HG00140_ch_T0001203;gene_id=HG00140_ch_G0000399;Parent=HG00140_ch_T0001203;transcript_name=HG00140_ch_T0001203;gene_name=ENSG00000307031;ID=intron:HG00140_ch_T0001203:1;Name=ENSG00000307031;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19045957	19046178	.	-	.	source_transcript=ENST00000823008.1;source_transcript_name=ENST00000823008;source_gene=ENSG00000307031.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307031.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000823008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000823008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307031;transcript_id=HG00140_ch_T0001203;gene_id=HG00140_ch_G0000399;Parent=HG00140_ch_T0001203;transcript_name=HG00140_ch_T0001203;gene_name=ENSG00000307031;ID=exon:HG00140_ch_T0001203:2;Name=ENSG00000307031;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	19054299	19073318	.	+	.	source_gene_common_name=OFD1P7Y;source_gene=ENSG00000238088.1;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;gene_id=HG00140_ch_G0000400;gene_biotype=unprocessed_pseudogene;gene_name=OFD1P7Y;gene_sources=liftoff;ID=HG00140_ch_G0000400;Name=OFD1P7Y
HG00140_chrY	CAT	transcript	19054299	19073318	1000	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG00140_ch_T0001204;gene_id=HG00140_ch_G0000400;Parent=HG00140_ch_G0000400;transcript_name=HG00140_ch_T0001204;gene_name=OFD1P7Y;ID=HG00140_ch_T0001204;Name=OFD1P7Y
HG00140_chrY	CAT	exon	19054299	19054370	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG00140_ch_T0001204;gene_id=HG00140_ch_G0000400;Parent=HG00140_ch_T0001204;transcript_name=HG00140_ch_T0001204;gene_name=OFD1P7Y;ID=exon:HG00140_ch_T0001204:0;Name=OFD1P7Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19054371	19055562	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG00140_ch_T0001204;gene_id=HG00140_ch_G0000400;Parent=HG00140_ch_T0001204;transcript_name=HG00140_ch_T0001204;gene_name=OFD1P7Y;ID=intron:HG00140_ch_T0001204:0;Name=OFD1P7Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19055563	19055763	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG00140_ch_T0001204;gene_id=HG00140_ch_G0000400;Parent=HG00140_ch_T0001204;transcript_name=HG00140_ch_T0001204;gene_name=OFD1P7Y;ID=exon:HG00140_ch_T0001204:1;Name=OFD1P7Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19055764	19057982	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG00140_ch_T0001204;gene_id=HG00140_ch_G0000400;Parent=HG00140_ch_T0001204;transcript_name=HG00140_ch_T0001204;gene_name=OFD1P7Y;ID=intron:HG00140_ch_T0001204:1;Name=OFD1P7Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19057983	19058047	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG00140_ch_T0001204;gene_id=HG00140_ch_G0000400;Parent=HG00140_ch_T0001204;transcript_name=HG00140_ch_T0001204;gene_name=OFD1P7Y;ID=exon:HG00140_ch_T0001204:2;Name=OFD1P7Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19058048	19058134	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG00140_ch_T0001204;gene_id=HG00140_ch_G0000400;Parent=HG00140_ch_T0001204;transcript_name=HG00140_ch_T0001204;gene_name=OFD1P7Y;ID=intron:HG00140_ch_T0001204:2;Name=OFD1P7Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19058135	19058164	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG00140_ch_T0001204;gene_id=HG00140_ch_G0000400;Parent=HG00140_ch_T0001204;transcript_name=HG00140_ch_T0001204;gene_name=OFD1P7Y;ID=exon:HG00140_ch_T0001204:3;Name=OFD1P7Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19058165	19062386	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG00140_ch_T0001204;gene_id=HG00140_ch_G0000400;Parent=HG00140_ch_T0001204;transcript_name=HG00140_ch_T0001204;gene_name=OFD1P7Y;ID=intron:HG00140_ch_T0001204:3;Name=OFD1P7Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19062387	19062523	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG00140_ch_T0001204;gene_id=HG00140_ch_G0000400;Parent=HG00140_ch_T0001204;transcript_name=HG00140_ch_T0001204;gene_name=OFD1P7Y;ID=exon:HG00140_ch_T0001204:4;Name=OFD1P7Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19062524	19062871	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG00140_ch_T0001204;gene_id=HG00140_ch_G0000400;Parent=HG00140_ch_T0001204;transcript_name=HG00140_ch_T0001204;gene_name=OFD1P7Y;ID=intron:HG00140_ch_T0001204:4;Name=OFD1P7Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19062872	19062987	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG00140_ch_T0001204;gene_id=HG00140_ch_G0000400;Parent=HG00140_ch_T0001204;transcript_name=HG00140_ch_T0001204;gene_name=OFD1P7Y;ID=exon:HG00140_ch_T0001204:5;Name=OFD1P7Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19062988	19066097	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG00140_ch_T0001204;gene_id=HG00140_ch_G0000400;Parent=HG00140_ch_T0001204;transcript_name=HG00140_ch_T0001204;gene_name=OFD1P7Y;ID=intron:HG00140_ch_T0001204:5;Name=OFD1P7Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19066098	19066204	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG00140_ch_T0001204;gene_id=HG00140_ch_G0000400;Parent=HG00140_ch_T0001204;transcript_name=HG00140_ch_T0001204;gene_name=OFD1P7Y;ID=exon:HG00140_ch_T0001204:6;Name=OFD1P7Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19066205	19068372	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG00140_ch_T0001204;gene_id=HG00140_ch_G0000400;Parent=HG00140_ch_T0001204;transcript_name=HG00140_ch_T0001204;gene_name=OFD1P7Y;ID=intron:HG00140_ch_T0001204:6;Name=OFD1P7Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19068373	19068490	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG00140_ch_T0001204;gene_id=HG00140_ch_G0000400;Parent=HG00140_ch_T0001204;transcript_name=HG00140_ch_T0001204;gene_name=OFD1P7Y;ID=exon:HG00140_ch_T0001204:7;Name=OFD1P7Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19068491	19070271	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG00140_ch_T0001204;gene_id=HG00140_ch_G0000400;Parent=HG00140_ch_T0001204;transcript_name=HG00140_ch_T0001204;gene_name=OFD1P7Y;ID=intron:HG00140_ch_T0001204:7;Name=OFD1P7Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19070272	19070339	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG00140_ch_T0001204;gene_id=HG00140_ch_G0000400;Parent=HG00140_ch_T0001204;transcript_name=HG00140_ch_T0001204;gene_name=OFD1P7Y;ID=exon:HG00140_ch_T0001204:8;Name=OFD1P7Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19070340	19071451	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG00140_ch_T0001204;gene_id=HG00140_ch_G0000400;Parent=HG00140_ch_T0001204;transcript_name=HG00140_ch_T0001204;gene_name=OFD1P7Y;ID=intron:HG00140_ch_T0001204:8;Name=OFD1P7Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19071452	19071551	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG00140_ch_T0001204;gene_id=HG00140_ch_G0000400;Parent=HG00140_ch_T0001204;transcript_name=HG00140_ch_T0001204;gene_name=OFD1P7Y;ID=exon:HG00140_ch_T0001204:9;Name=OFD1P7Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19071552	19073177	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG00140_ch_T0001204;gene_id=HG00140_ch_G0000400;Parent=HG00140_ch_T0001204;transcript_name=HG00140_ch_T0001204;gene_name=OFD1P7Y;ID=intron:HG00140_ch_T0001204:9;Name=OFD1P7Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19073178	19073318	.	+	.	source_transcript=ENST00000454643.1;source_transcript_name=OFD1P7Y-201;source_gene=ENSG00000238088.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238088.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454643.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454643.1;transcript_score=299.827;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P7Y;alternative_source_transcripts=ENST00000454643.1,ENST00000454643.1;transcript_id=HG00140_ch_T0001204;gene_id=HG00140_ch_G0000400;Parent=HG00140_ch_T0001204;transcript_name=HG00140_ch_T0001204;gene_name=OFD1P7Y;ID=exon:HG00140_ch_T0001204:10;Name=OFD1P7Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	19078140	19078310	.	+	.	source_gene_common_name=MTCYBP2;source_gene=ENSG00000217179.1;alternative_source_transcripts=ENST00000407745.1,ENST00000407745.1;gene_id=HG00140_ch_G0000401;gene_biotype=processed_pseudogene;gene_name=MTCYBP2;gene_sources=liftoff;ID=HG00140_ch_G0000401;Name=MTCYBP2
HG00140_chrY	CAT	transcript	19078140	19078310	1000	+	.	source_transcript=ENST00000407745.1;source_transcript_name=MTCYBP2-201;source_gene=ENSG00000217179.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000217179.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000407745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000407745.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTCYBP2;alternative_source_transcripts=ENST00000407745.1,ENST00000407745.1;transcript_id=HG00140_ch_T0001205;gene_id=HG00140_ch_G0000401;Parent=HG00140_ch_G0000401;transcript_name=HG00140_ch_T0001205;gene_name=MTCYBP2;ID=HG00140_ch_T0001205;Name=MTCYBP2
HG00140_chrY	CAT	exon	19078140	19078310	.	+	.	source_transcript=ENST00000407745.1;source_transcript_name=MTCYBP2-201;source_gene=ENSG00000217179.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000217179.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000407745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000407745.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MTCYBP2;alternative_source_transcripts=ENST00000407745.1,ENST00000407745.1;transcript_id=HG00140_ch_T0001205;gene_id=HG00140_ch_G0000401;Parent=HG00140_ch_T0001205;transcript_name=HG00140_ch_T0001205;gene_name=MTCYBP2;ID=exon:HG00140_ch_T0001205:0;Name=MTCYBP2;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	19191238	19192461	.	+	.	source_gene_common_name=ZNF839P1;source_gene=ENSG00000217896.2;alternative_source_transcripts=ENST00000403487.2,ENST00000403487.2;gene_id=HG00140_ch_G0000402;gene_biotype=processed_pseudogene;gene_name=ZNF839P1;gene_sources=liftoff;ID=HG00140_ch_G0000402;Name=ZNF839P1
HG00140_chrY	CAT	transcript	19191238	19192461	1000	+	.	source_transcript=ENST00000403487.2;source_transcript_name=ZNF839P1-201;source_gene=ENSG00000217896.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000217896.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000403487.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000403487.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF839P1;alternative_source_transcripts=ENST00000403487.2,ENST00000403487.2;transcript_id=HG00140_ch_T0001206;gene_id=HG00140_ch_G0000402;Parent=HG00140_ch_G0000402;transcript_name=HG00140_ch_T0001206;gene_name=ZNF839P1;ID=HG00140_ch_T0001206;Name=ZNF839P1
HG00140_chrY	CAT	exon	19191238	19191917	.	+	.	source_transcript=ENST00000403487.2;source_transcript_name=ZNF839P1-201;source_gene=ENSG00000217896.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000217896.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000403487.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000403487.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF839P1;alternative_source_transcripts=ENST00000403487.2,ENST00000403487.2;transcript_id=HG00140_ch_T0001206;gene_id=HG00140_ch_G0000402;Parent=HG00140_ch_T0001206;transcript_name=HG00140_ch_T0001206;gene_name=ZNF839P1;ID=exon:HG00140_ch_T0001206:0;Name=ZNF839P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19191918	19192280	.	+	.	source_transcript=ENST00000403487.2;source_transcript_name=ZNF839P1-201;source_gene=ENSG00000217896.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000217896.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000403487.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000403487.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF839P1;alternative_source_transcripts=ENST00000403487.2,ENST00000403487.2;transcript_id=HG00140_ch_T0001206;gene_id=HG00140_ch_G0000402;Parent=HG00140_ch_T0001206;transcript_name=HG00140_ch_T0001206;gene_name=ZNF839P1;ID=intron:HG00140_ch_T0001206:0;Name=ZNF839P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19192281	19192461	.	+	.	source_transcript=ENST00000403487.2;source_transcript_name=ZNF839P1-201;source_gene=ENSG00000217896.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000217896.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000403487.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000403487.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF839P1;alternative_source_transcripts=ENST00000403487.2,ENST00000403487.2;transcript_id=HG00140_ch_T0001206;gene_id=HG00140_ch_G0000402;Parent=HG00140_ch_T0001206;transcript_name=HG00140_ch_T0001206;gene_name=ZNF839P1;ID=exon:HG00140_ch_T0001206:1;Name=ZNF839P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	19198529	19198771	.	-	.	source_gene_common_name=CD24P4;source_gene=ENSG00000185275.6;alternative_source_transcripts=ENST00000382840.3,ENST00000382840.3;gene_id=HG00140_ch_G0000403;gene_biotype=processed_pseudogene;gene_name=CD24P4;gene_sources=liftoff;ID=HG00140_ch_G0000403;Name=CD24P4
HG00140_chrY	CAT	transcript	19198529	19198771	1000	-	.	source_transcript=ENST00000382840.3;source_transcript_name=CD24P4-201;source_gene=ENSG00000185275.6;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000185275.6;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000382840.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382840.3;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD24P4;alternative_source_transcripts=ENST00000382840.3,ENST00000382840.3;transcript_id=HG00140_ch_T0001207;gene_id=HG00140_ch_G0000403;Parent=HG00140_ch_G0000403;transcript_name=HG00140_ch_T0001207;gene_name=CD24P4;ID=HG00140_ch_T0001207;Name=CD24P4
HG00140_chrY	CAT	exon	19198529	19198771	.	-	.	source_transcript=ENST00000382840.3;source_transcript_name=CD24P4-201;source_gene=ENSG00000185275.6;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000185275.6;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000382840.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382840.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD24P4;alternative_source_transcripts=ENST00000382840.3,ENST00000382840.3;transcript_id=HG00140_ch_T0001207;gene_id=HG00140_ch_G0000403;Parent=HG00140_ch_T0001207;transcript_name=HG00140_ch_T0001207;gene_name=CD24P4;ID=exon:HG00140_ch_T0001207:0;Name=CD24P4;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	19225046	19225150	.	-	.	source_gene_common_name=RNU6-255P;source_gene=ENSG00000252766.1;alternative_source_transcripts=ENST00000516957.1,ENST00000516957.1;gene_id=HG00140_ch_G0000404;gene_biotype=snRNA;gene_name=RNU6-255P;gene_sources=liftoff;ID=HG00140_ch_G0000404;Name=RNU6-255P
HG00140_chrY	CAT	transcript	19225046	19225150	1000	-	.	source_transcript=ENST00000516957.1;source_transcript_name=RNU6-255P-201;source_gene=ENSG00000252766.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252766.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516957.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-255P;alternative_source_transcripts=ENST00000516957.1,ENST00000516957.1;transcript_id=HG00140_ch_T0001208;gene_id=HG00140_ch_G0000404;Parent=HG00140_ch_G0000404;transcript_name=HG00140_ch_T0001208;gene_name=RNU6-255P;ID=HG00140_ch_T0001208;Name=RNU6-255P
HG00140_chrY	CAT	exon	19225046	19225150	.	-	.	source_transcript=ENST00000516957.1;source_transcript_name=RNU6-255P-201;source_gene=ENSG00000252766.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252766.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516957.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-255P;alternative_source_transcripts=ENST00000516957.1,ENST00000516957.1;transcript_id=HG00140_ch_T0001208;gene_id=HG00140_ch_G0000404;Parent=HG00140_ch_T0001208;transcript_name=HG00140_ch_T0001208;gene_name=RNU6-255P;ID=exon:HG00140_ch_T0001208:0;Name=RNU6-255P;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	19282371	19293298	.	+	.	source_gene_common_name=ENSG00000310485;source_gene=ENSG00000310485.1;alternative_source_transcripts=ENST00000850331.1,ENST00000850331.1;gene_id=HG00140_ch_G0000405;gene_biotype=lncRNA;gene_name=ENSG00000310485;gene_sources=liftoff;ID=HG00140_ch_G0000405;Name=ENSG00000310485
HG00140_chrY	CAT	transcript	19282371	19293298	1000	+	.	source_transcript=ENST00000850331.1;source_transcript_name=ENST00000850331;source_gene=ENSG00000310485.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310485.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850331.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310485;alternative_source_transcripts=ENST00000850331.1,ENST00000850331.1;transcript_id=HG00140_ch_T0001209;gene_id=HG00140_ch_G0000405;Parent=HG00140_ch_G0000405;transcript_name=HG00140_ch_T0001209;gene_name=ENSG00000310485;ID=HG00140_ch_T0001209;Name=ENSG00000310485
HG00140_chrY	CAT	exon	19282371	19282494	.	+	.	source_transcript=ENST00000850331.1;source_transcript_name=ENST00000850331;source_gene=ENSG00000310485.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310485.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850331.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310485;alternative_source_transcripts=ENST00000850331.1,ENST00000850331.1;transcript_id=HG00140_ch_T0001209;gene_id=HG00140_ch_G0000405;Parent=HG00140_ch_T0001209;transcript_name=HG00140_ch_T0001209;gene_name=ENSG00000310485;ID=exon:HG00140_ch_T0001209:0;Name=ENSG00000310485;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19282495	19292736	.	+	.	source_transcript=ENST00000850331.1;source_transcript_name=ENST00000850331;source_gene=ENSG00000310485.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310485.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850331.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310485;alternative_source_transcripts=ENST00000850331.1,ENST00000850331.1;transcript_id=HG00140_ch_T0001209;gene_id=HG00140_ch_G0000405;Parent=HG00140_ch_T0001209;transcript_name=HG00140_ch_T0001209;gene_name=ENSG00000310485;ID=intron:HG00140_ch_T0001209:0;Name=ENSG00000310485;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19292737	19293298	.	+	.	source_transcript=ENST00000850331.1;source_transcript_name=ENST00000850331;source_gene=ENSG00000310485.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310485.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850331.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310485;alternative_source_transcripts=ENST00000850331.1,ENST00000850331.1;transcript_id=HG00140_ch_T0001209;gene_id=HG00140_ch_G0000405;Parent=HG00140_ch_T0001209;transcript_name=HG00140_ch_T0001209;gene_name=ENSG00000310485;ID=exon:HG00140_ch_T0001209:1;Name=ENSG00000310485;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19282418	19282754	1000	+	.	source_transcript=ENST00000850332.1;source_transcript_name=ENST00000850332;source_gene=ENSG00000310485.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310485.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850332.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310485;alternative_source_transcripts=ENST00000850332.1,ENST00000850332.1;transcript_id=HG00140_ch_T0001210;gene_id=HG00140_ch_G0000405;Parent=HG00140_ch_G0000405;transcript_name=HG00140_ch_T0001210;gene_name=ENSG00000310485;ID=HG00140_ch_T0001210;Name=ENSG00000310485
HG00140_chrY	CAT	exon	19282418	19282494	.	+	.	source_transcript=ENST00000850332.1;source_transcript_name=ENST00000850332;source_gene=ENSG00000310485.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310485.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850332.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310485;alternative_source_transcripts=ENST00000850332.1,ENST00000850332.1;transcript_id=HG00140_ch_T0001210;gene_id=HG00140_ch_G0000405;Parent=HG00140_ch_T0001210;transcript_name=HG00140_ch_T0001210;gene_name=ENSG00000310485;ID=exon:HG00140_ch_T0001210:0;Name=ENSG00000310485;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19282495	19282582	.	+	.	source_transcript=ENST00000850332.1;source_transcript_name=ENST00000850332;source_gene=ENSG00000310485.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310485.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850332.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310485;alternative_source_transcripts=ENST00000850332.1,ENST00000850332.1;transcript_id=HG00140_ch_T0001210;gene_id=HG00140_ch_G0000405;Parent=HG00140_ch_T0001210;transcript_name=HG00140_ch_T0001210;gene_name=ENSG00000310485;ID=intron:HG00140_ch_T0001210:0;Name=ENSG00000310485;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19282583	19282754	.	+	.	source_transcript=ENST00000850332.1;source_transcript_name=ENST00000850332;source_gene=ENSG00000310485.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310485.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850332.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310485;alternative_source_transcripts=ENST00000850332.1,ENST00000850332.1;transcript_id=HG00140_ch_T0001210;gene_id=HG00140_ch_G0000405;Parent=HG00140_ch_T0001210;transcript_name=HG00140_ch_T0001210;gene_name=ENSG00000310485;ID=exon:HG00140_ch_T0001210:1;Name=ENSG00000310485;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	19460215	19467130	.	-	.	source_gene_common_name=ENSG00000274282;source_gene=ENSG00000274282.1;alternative_source_transcripts=ENST00000615809.1,ENST00000615809.1;gene_id=HG00140_ch_G0000406;gene_biotype=processed_pseudogene;gene_name=ENSG00000274282;gene_sources=liftoff;ID=HG00140_ch_G0000406;Name=ENSG00000274282
HG00140_chrY	CAT	transcript	19460215	19467130	1000	-	.	source_transcript=ENST00000615809.1;source_transcript_name=ENST00000615809;source_gene=ENSG00000274282.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274282.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000615809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615809.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274282;alternative_source_transcripts=ENST00000615809.1,ENST00000615809.1;transcript_id=HG00140_ch_T0001211;gene_id=HG00140_ch_G0000406;Parent=HG00140_ch_G0000406;transcript_name=HG00140_ch_T0001211;gene_name=ENSG00000274282;ID=HG00140_ch_T0001211;Name=ENSG00000274282
HG00140_chrY	CAT	exon	19460215	19460707	.	-	.	source_transcript=ENST00000615809.1;source_transcript_name=ENST00000615809;source_gene=ENSG00000274282.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274282.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000615809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615809.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274282;alternative_source_transcripts=ENST00000615809.1,ENST00000615809.1;transcript_id=HG00140_ch_T0001211;gene_id=HG00140_ch_G0000406;Parent=HG00140_ch_T0001211;transcript_name=HG00140_ch_T0001211;gene_name=ENSG00000274282;ID=exon:HG00140_ch_T0001211:0;Name=ENSG00000274282;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19460708	19466781	.	-	.	source_transcript=ENST00000615809.1;source_transcript_name=ENST00000615809;source_gene=ENSG00000274282.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274282.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000615809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615809.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274282;alternative_source_transcripts=ENST00000615809.1,ENST00000615809.1;transcript_id=HG00140_ch_T0001211;gene_id=HG00140_ch_G0000406;Parent=HG00140_ch_T0001211;transcript_name=HG00140_ch_T0001211;gene_name=ENSG00000274282;ID=intron:HG00140_ch_T0001211:0;Name=ENSG00000274282;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19466782	19467130	.	-	.	source_transcript=ENST00000615809.1;source_transcript_name=ENST00000615809;source_gene=ENSG00000274282.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274282.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000615809.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615809.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274282;alternative_source_transcripts=ENST00000615809.1,ENST00000615809.1;transcript_id=HG00140_ch_T0001211;gene_id=HG00140_ch_G0000406;Parent=HG00140_ch_T0001211;transcript_name=HG00140_ch_T0001211;gene_name=ENSG00000274282;ID=exon:HG00140_ch_T0001211:1;Name=ENSG00000274282;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	19533852	19534856	.	+	.	source_gene_common_name=GAPDHP19;source_gene=ENSG00000234529.2;alternative_source_transcripts=ENST00000431768.2,ENST00000431768.2;gene_id=HG00140_ch_G0000407;gene_biotype=processed_pseudogene;gene_name=GAPDHP19;gene_sources=liftoff;ID=HG00140_ch_G0000407;Name=GAPDHP19
HG00140_chrY	CAT	transcript	19533852	19534856	1000	+	.	source_transcript=ENST00000431768.2;source_transcript_name=GAPDHP19-201;source_gene=ENSG00000234529.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234529.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000431768.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431768.2;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GAPDHP19;alternative_source_transcripts=ENST00000431768.2,ENST00000431768.2;transcript_id=HG00140_ch_T0001212;gene_id=HG00140_ch_G0000407;Parent=HG00140_ch_G0000407;transcript_name=HG00140_ch_T0001212;gene_name=GAPDHP19;ID=HG00140_ch_T0001212;Name=GAPDHP19
HG00140_chrY	CAT	exon	19533852	19534856	.	+	.	source_transcript=ENST00000431768.2;source_transcript_name=GAPDHP19-201;source_gene=ENSG00000234529.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234529.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000431768.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000431768.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GAPDHP19;alternative_source_transcripts=ENST00000431768.2,ENST00000431768.2;transcript_id=HG00140_ch_T0001212;gene_id=HG00140_ch_G0000407;Parent=HG00140_ch_T0001212;transcript_name=HG00140_ch_T0001212;gene_name=GAPDHP19;ID=exon:HG00140_ch_T0001212:0;Name=GAPDHP19;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	19661683	19773533	.	-	.	source_gene_common_name=BCORP1;source_gene=ENSG00000291031.2;gene_id=HG00140_ch_G0000408;gene_biotype=lncRNA;gene_name=BCORP1;gene_sources=liftoff;ID=HG00140_ch_G0000408;Name=BCORP1
HG00140_chrY	CAT	transcript	19661683	19709425	1000	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001213;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001213;gene_name=BCORP1;ID=HG00140_ch_T0001213;Name=BCORP1
HG00140_chrY	CAT	exon	19661683	19663116	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001213;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001213;transcript_name=HG00140_ch_T0001213;gene_name=BCORP1;ID=exon:HG00140_ch_T0001213:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19663117	19665175	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001213;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001213;transcript_name=HG00140_ch_T0001213;gene_name=BCORP1;ID=intron:HG00140_ch_T0001213:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19665176	19665331	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001213;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001213;transcript_name=HG00140_ch_T0001213;gene_name=BCORP1;ID=exon:HG00140_ch_T0001213:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19665332	19665540	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001213;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001213;transcript_name=HG00140_ch_T0001213;gene_name=BCORP1;ID=intron:HG00140_ch_T0001213:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19665541	19665618	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001213;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001213;transcript_name=HG00140_ch_T0001213;gene_name=BCORP1;ID=exon:HG00140_ch_T0001213:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19665619	19671354	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001213;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001213;transcript_name=HG00140_ch_T0001213;gene_name=BCORP1;ID=intron:HG00140_ch_T0001213:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19671355	19671476	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001213;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001213;transcript_name=HG00140_ch_T0001213;gene_name=BCORP1;ID=exon:HG00140_ch_T0001213:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19671477	19672704	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001213;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001213;transcript_name=HG00140_ch_T0001213;gene_name=BCORP1;ID=intron:HG00140_ch_T0001213:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19672705	19673623	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001213;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001213;transcript_name=HG00140_ch_T0001213;gene_name=BCORP1;ID=exon:HG00140_ch_T0001213:4;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19673624	19680153	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001213;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001213;transcript_name=HG00140_ch_T0001213;gene_name=BCORP1;ID=intron:HG00140_ch_T0001213:4;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19680154	19680393	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001213;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001213;transcript_name=HG00140_ch_T0001213;gene_name=BCORP1;ID=exon:HG00140_ch_T0001213:5;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19680394	19680888	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001213;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001213;transcript_name=HG00140_ch_T0001213;gene_name=BCORP1;ID=intron:HG00140_ch_T0001213:5;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19680889	19681152	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001213;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001213;transcript_name=HG00140_ch_T0001213;gene_name=BCORP1;ID=exon:HG00140_ch_T0001213:6;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19681153	19686417	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001213;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001213;transcript_name=HG00140_ch_T0001213;gene_name=BCORP1;ID=intron:HG00140_ch_T0001213:6;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19686418	19686543	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001213;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001213;transcript_name=HG00140_ch_T0001213;gene_name=BCORP1;ID=exon:HG00140_ch_T0001213:7;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19686544	19709280	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001213;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001213;transcript_name=HG00140_ch_T0001213;gene_name=BCORP1;ID=intron:HG00140_ch_T0001213:7;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19709281	19709425	.	-	.	source_transcript=ENST00000441139.6;source_transcript_name=BCORP1-203;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441139.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000441139.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001213;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001213;transcript_name=HG00140_ch_T0001213;gene_name=BCORP1;ID=exon:HG00140_ch_T0001213:8;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19662564	19709385	1000	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001214;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001214;gene_name=BCORP1;ID=HG00140_ch_T0001214;Name=BCORP1
HG00140_chrY	CAT	exon	19662564	19663116	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001214;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001214;transcript_name=HG00140_ch_T0001214;gene_name=BCORP1;ID=exon:HG00140_ch_T0001214:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19663117	19663308	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001214;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001214;transcript_name=HG00140_ch_T0001214;gene_name=BCORP1;ID=intron:HG00140_ch_T0001214:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19663309	19663369	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001214;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001214;transcript_name=HG00140_ch_T0001214;gene_name=BCORP1;ID=exon:HG00140_ch_T0001214:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19663370	19665175	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001214;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001214;transcript_name=HG00140_ch_T0001214;gene_name=BCORP1;ID=intron:HG00140_ch_T0001214:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19665176	19665331	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001214;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001214;transcript_name=HG00140_ch_T0001214;gene_name=BCORP1;ID=exon:HG00140_ch_T0001214:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19665332	19665540	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001214;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001214;transcript_name=HG00140_ch_T0001214;gene_name=BCORP1;ID=intron:HG00140_ch_T0001214:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19665541	19665618	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001214;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001214;transcript_name=HG00140_ch_T0001214;gene_name=BCORP1;ID=exon:HG00140_ch_T0001214:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19665619	19666210	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001214;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001214;transcript_name=HG00140_ch_T0001214;gene_name=BCORP1;ID=intron:HG00140_ch_T0001214:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19666211	19666356	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001214;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001214;transcript_name=HG00140_ch_T0001214;gene_name=BCORP1;ID=exon:HG00140_ch_T0001214:4;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19666357	19671354	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001214;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001214;transcript_name=HG00140_ch_T0001214;gene_name=BCORP1;ID=intron:HG00140_ch_T0001214:4;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19671355	19671476	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001214;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001214;transcript_name=HG00140_ch_T0001214;gene_name=BCORP1;ID=exon:HG00140_ch_T0001214:5;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19671477	19672704	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001214;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001214;transcript_name=HG00140_ch_T0001214;gene_name=BCORP1;ID=intron:HG00140_ch_T0001214:5;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19672705	19673623	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001214;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001214;transcript_name=HG00140_ch_T0001214;gene_name=BCORP1;ID=exon:HG00140_ch_T0001214:6;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19673624	19680153	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001214;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001214;transcript_name=HG00140_ch_T0001214;gene_name=BCORP1;ID=intron:HG00140_ch_T0001214:6;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19680154	19680393	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001214;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001214;transcript_name=HG00140_ch_T0001214;gene_name=BCORP1;ID=exon:HG00140_ch_T0001214:7;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19680394	19680888	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001214;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001214;transcript_name=HG00140_ch_T0001214;gene_name=BCORP1;ID=intron:HG00140_ch_T0001214:7;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19680889	19681152	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001214;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001214;transcript_name=HG00140_ch_T0001214;gene_name=BCORP1;ID=exon:HG00140_ch_T0001214:8;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19681153	19686417	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001214;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001214;transcript_name=HG00140_ch_T0001214;gene_name=BCORP1;ID=intron:HG00140_ch_T0001214:8;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19686418	19686543	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001214;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001214;transcript_name=HG00140_ch_T0001214;gene_name=BCORP1;ID=exon:HG00140_ch_T0001214:9;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19686544	19709280	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001214;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001214;transcript_name=HG00140_ch_T0001214;gene_name=BCORP1;ID=intron:HG00140_ch_T0001214:9;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19709281	19709385	.	-	.	source_transcript=ENST00000400605.5;source_transcript_name=BCORP1-202;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400605.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000400605.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001214;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001214;transcript_name=HG00140_ch_T0001214;gene_name=BCORP1;ID=exon:HG00140_ch_T0001214:10;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19662646	19773345	1000	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001215;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001215;gene_name=BCORP1;ID=HG00140_ch_T0001215;Name=BCORP1
HG00140_chrY	CAT	exon	19662646	19663116	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001215;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001215;transcript_name=HG00140_ch_T0001215;gene_name=BCORP1;ID=exon:HG00140_ch_T0001215:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19663117	19665175	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001215;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001215;transcript_name=HG00140_ch_T0001215;gene_name=BCORP1;ID=intron:HG00140_ch_T0001215:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19665176	19665331	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001215;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001215;transcript_name=HG00140_ch_T0001215;gene_name=BCORP1;ID=exon:HG00140_ch_T0001215:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19665332	19665540	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001215;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001215;transcript_name=HG00140_ch_T0001215;gene_name=BCORP1;ID=intron:HG00140_ch_T0001215:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19665541	19665618	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001215;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001215;transcript_name=HG00140_ch_T0001215;gene_name=BCORP1;ID=exon:HG00140_ch_T0001215:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19665619	19666210	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001215;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001215;transcript_name=HG00140_ch_T0001215;gene_name=BCORP1;ID=intron:HG00140_ch_T0001215:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19666211	19666356	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001215;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001215;transcript_name=HG00140_ch_T0001215;gene_name=BCORP1;ID=exon:HG00140_ch_T0001215:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19666357	19671354	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001215;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001215;transcript_name=HG00140_ch_T0001215;gene_name=BCORP1;ID=intron:HG00140_ch_T0001215:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19671355	19671476	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001215;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001215;transcript_name=HG00140_ch_T0001215;gene_name=BCORP1;ID=exon:HG00140_ch_T0001215:4;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19671477	19672704	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001215;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001215;transcript_name=HG00140_ch_T0001215;gene_name=BCORP1;ID=intron:HG00140_ch_T0001215:4;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19672705	19673623	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001215;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001215;transcript_name=HG00140_ch_T0001215;gene_name=BCORP1;ID=exon:HG00140_ch_T0001215:5;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19673624	19680153	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001215;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001215;transcript_name=HG00140_ch_T0001215;gene_name=BCORP1;ID=intron:HG00140_ch_T0001215:5;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19680154	19680393	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001215;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001215;transcript_name=HG00140_ch_T0001215;gene_name=BCORP1;ID=exon:HG00140_ch_T0001215:6;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19680394	19680888	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001215;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001215;transcript_name=HG00140_ch_T0001215;gene_name=BCORP1;ID=intron:HG00140_ch_T0001215:6;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19680889	19681152	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001215;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001215;transcript_name=HG00140_ch_T0001215;gene_name=BCORP1;ID=exon:HG00140_ch_T0001215:7;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19681153	19686417	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001215;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001215;transcript_name=HG00140_ch_T0001215;gene_name=BCORP1;ID=intron:HG00140_ch_T0001215:7;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19686418	19686543	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001215;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001215;transcript_name=HG00140_ch_T0001215;gene_name=BCORP1;ID=exon:HG00140_ch_T0001215:8;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19686544	19773234	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001215;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001215;transcript_name=HG00140_ch_T0001215;gene_name=BCORP1;ID=intron:HG00140_ch_T0001215:8;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773345	.	-	.	source_transcript=ENST00000650676.1;source_transcript_name=BCORP1-204;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000650676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000650676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001215;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001215;transcript_name=HG00140_ch_T0001215;gene_name=BCORP1;ID=exon:HG00140_ch_T0001215:9;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19664281	19666356	1000	-	.	source_transcript=ENST00000840635.1;source_transcript_name=BCORP1-266;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840635.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840635.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001217;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001217;gene_name=BCORP1;ID=HG00140_ch_T0001217;Name=BCORP1
HG00140_chrY	CAT	exon	19664281	19665331	.	-	.	source_transcript=ENST00000840635.1;source_transcript_name=BCORP1-266;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840635.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840635.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001217;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001217;transcript_name=HG00140_ch_T0001217;gene_name=BCORP1;ID=exon:HG00140_ch_T0001217:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19665332	19665540	.	-	.	source_transcript=ENST00000840635.1;source_transcript_name=BCORP1-266;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840635.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840635.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001217;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001217;transcript_name=HG00140_ch_T0001217;gene_name=BCORP1;ID=intron:HG00140_ch_T0001217:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19665541	19665618	.	-	.	source_transcript=ENST00000840635.1;source_transcript_name=BCORP1-266;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840635.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840635.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001217;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001217;transcript_name=HG00140_ch_T0001217;gene_name=BCORP1;ID=exon:HG00140_ch_T0001217:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19665619	19666210	.	-	.	source_transcript=ENST00000840635.1;source_transcript_name=BCORP1-266;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840635.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840635.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001217;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001217;transcript_name=HG00140_ch_T0001217;gene_name=BCORP1;ID=intron:HG00140_ch_T0001217:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19666211	19666356	.	-	.	source_transcript=ENST00000840635.1;source_transcript_name=BCORP1-266;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840635.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840635.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001217;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001217;transcript_name=HG00140_ch_T0001217;gene_name=BCORP1;ID=exon:HG00140_ch_T0001217:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19743292	19773283	1000	-	.	source_transcript=ENST00000760991.1;source_transcript_name=BCORP1-207;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760991.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760991.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001218;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001218;gene_name=BCORP1;ID=HG00140_ch_T0001218;Name=BCORP1
HG00140_chrY	CAT	exon	19743292	19743456	.	-	.	source_transcript=ENST00000760991.1;source_transcript_name=BCORP1-207;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760991.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760991.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001218;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001218;transcript_name=HG00140_ch_T0001218;gene_name=BCORP1;ID=exon:HG00140_ch_T0001218:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19743457	19745839	.	-	.	source_transcript=ENST00000760991.1;source_transcript_name=BCORP1-207;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760991.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760991.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001218;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001218;transcript_name=HG00140_ch_T0001218;gene_name=BCORP1;ID=intron:HG00140_ch_T0001218:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19745840	19746066	.	-	.	source_transcript=ENST00000760991.1;source_transcript_name=BCORP1-207;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760991.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760991.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001218;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001218;transcript_name=HG00140_ch_T0001218;gene_name=BCORP1;ID=exon:HG00140_ch_T0001218:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19746067	19764292	.	-	.	source_transcript=ENST00000760991.1;source_transcript_name=BCORP1-207;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760991.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760991.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001218;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001218;transcript_name=HG00140_ch_T0001218;gene_name=BCORP1;ID=intron:HG00140_ch_T0001218:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764293	19764393	.	-	.	source_transcript=ENST00000760991.1;source_transcript_name=BCORP1-207;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760991.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760991.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001218;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001218;transcript_name=HG00140_ch_T0001218;gene_name=BCORP1;ID=exon:HG00140_ch_T0001218:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19773234	.	-	.	source_transcript=ENST00000760991.1;source_transcript_name=BCORP1-207;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760991.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760991.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001218;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001218;transcript_name=HG00140_ch_T0001218;gene_name=BCORP1;ID=intron:HG00140_ch_T0001218:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773283	.	-	.	source_transcript=ENST00000760991.1;source_transcript_name=BCORP1-207;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760991.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760991.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001218;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001218;transcript_name=HG00140_ch_T0001218;gene_name=BCORP1;ID=exon:HG00140_ch_T0001218:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19743293	19773260	1000	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001219;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001219;gene_name=BCORP1;ID=HG00140_ch_T0001219;Name=BCORP1
HG00140_chrY	CAT	exon	19743293	19743456	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001219;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001219;transcript_name=HG00140_ch_T0001219;gene_name=BCORP1;ID=exon:HG00140_ch_T0001219:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19743457	19745839	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001219;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001219;transcript_name=HG00140_ch_T0001219;gene_name=BCORP1;ID=intron:HG00140_ch_T0001219:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19745840	19746066	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001219;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001219;transcript_name=HG00140_ch_T0001219;gene_name=BCORP1;ID=exon:HG00140_ch_T0001219:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19746067	19746434	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001219;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001219;transcript_name=HG00140_ch_T0001219;gene_name=BCORP1;ID=intron:HG00140_ch_T0001219:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19746435	19746546	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001219;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001219;transcript_name=HG00140_ch_T0001219;gene_name=BCORP1;ID=exon:HG00140_ch_T0001219:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19746547	19764292	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001219;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001219;transcript_name=HG00140_ch_T0001219;gene_name=BCORP1;ID=intron:HG00140_ch_T0001219:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764293	19764393	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001219;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001219;transcript_name=HG00140_ch_T0001219;gene_name=BCORP1;ID=exon:HG00140_ch_T0001219:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19765592	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001219;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001219;transcript_name=HG00140_ch_T0001219;gene_name=BCORP1;ID=intron:HG00140_ch_T0001219:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19765593	19765672	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001219;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001219;transcript_name=HG00140_ch_T0001219;gene_name=BCORP1;ID=exon:HG00140_ch_T0001219:4;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19765673	19773234	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001219;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001219;transcript_name=HG00140_ch_T0001219;gene_name=BCORP1;ID=intron:HG00140_ch_T0001219:4;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773260	.	-	.	source_transcript=ENST00000760992.1;source_transcript_name=BCORP1-208;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760992.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760992.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001219;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001219;transcript_name=HG00140_ch_T0001219;gene_name=BCORP1;ID=exon:HG00140_ch_T0001219:5;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19745681	19773297	1000	-	.	source_transcript=ENST00000760993.1;source_transcript_name=BCORP1-209;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760993.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001220;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001220;gene_name=BCORP1;ID=HG00140_ch_T0001220;Name=BCORP1
HG00140_chrY	CAT	exon	19745681	19746066	.	-	.	source_transcript=ENST00000760993.1;source_transcript_name=BCORP1-209;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001220;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001220;transcript_name=HG00140_ch_T0001220;gene_name=BCORP1;ID=exon:HG00140_ch_T0001220:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19746067	19746434	.	-	.	source_transcript=ENST00000760993.1;source_transcript_name=BCORP1-209;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001220;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001220;transcript_name=HG00140_ch_T0001220;gene_name=BCORP1;ID=intron:HG00140_ch_T0001220:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19746435	19746546	.	-	.	source_transcript=ENST00000760993.1;source_transcript_name=BCORP1-209;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001220;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001220;transcript_name=HG00140_ch_T0001220;gene_name=BCORP1;ID=exon:HG00140_ch_T0001220:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19746547	19764276	.	-	.	source_transcript=ENST00000760993.1;source_transcript_name=BCORP1-209;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001220;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001220;transcript_name=HG00140_ch_T0001220;gene_name=BCORP1;ID=intron:HG00140_ch_T0001220:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764277	19764393	.	-	.	source_transcript=ENST00000760993.1;source_transcript_name=BCORP1-209;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001220;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001220;transcript_name=HG00140_ch_T0001220;gene_name=BCORP1;ID=exon:HG00140_ch_T0001220:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19773234	.	-	.	source_transcript=ENST00000760993.1;source_transcript_name=BCORP1-209;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001220;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001220;transcript_name=HG00140_ch_T0001220;gene_name=BCORP1;ID=intron:HG00140_ch_T0001220:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773297	.	-	.	source_transcript=ENST00000760993.1;source_transcript_name=BCORP1-209;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001220;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001220;transcript_name=HG00140_ch_T0001220;gene_name=BCORP1;ID=exon:HG00140_ch_T0001220:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19745684	19773283	1000	-	.	source_transcript=ENST00000760994.1;source_transcript_name=BCORP1-210;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760994.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001221;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001221;gene_name=BCORP1;ID=HG00140_ch_T0001221;Name=BCORP1
HG00140_chrY	CAT	exon	19745684	19746066	.	-	.	source_transcript=ENST00000760994.1;source_transcript_name=BCORP1-210;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760994.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001221;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001221;transcript_name=HG00140_ch_T0001221;gene_name=BCORP1;ID=exon:HG00140_ch_T0001221:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19746067	19764292	.	-	.	source_transcript=ENST00000760994.1;source_transcript_name=BCORP1-210;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760994.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001221;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001221;transcript_name=HG00140_ch_T0001221;gene_name=BCORP1;ID=intron:HG00140_ch_T0001221:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764293	19764393	.	-	.	source_transcript=ENST00000760994.1;source_transcript_name=BCORP1-210;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760994.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001221;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001221;transcript_name=HG00140_ch_T0001221;gene_name=BCORP1;ID=exon:HG00140_ch_T0001221:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19773234	.	-	.	source_transcript=ENST00000760994.1;source_transcript_name=BCORP1-210;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760994.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001221;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001221;transcript_name=HG00140_ch_T0001221;gene_name=BCORP1;ID=intron:HG00140_ch_T0001221:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773283	.	-	.	source_transcript=ENST00000760994.1;source_transcript_name=BCORP1-210;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760994.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001221;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001221;transcript_name=HG00140_ch_T0001221;gene_name=BCORP1;ID=exon:HG00140_ch_T0001221:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19745733	19773262	1000	-	.	source_transcript=ENST00000760995.1;source_transcript_name=BCORP1-211;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760995.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001222;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001222;gene_name=BCORP1;ID=HG00140_ch_T0001222;Name=BCORP1
HG00140_chrY	CAT	exon	19745733	19746066	.	-	.	source_transcript=ENST00000760995.1;source_transcript_name=BCORP1-211;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001222;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001222;transcript_name=HG00140_ch_T0001222;gene_name=BCORP1;ID=exon:HG00140_ch_T0001222:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19746067	19746466	.	-	.	source_transcript=ENST00000760995.1;source_transcript_name=BCORP1-211;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001222;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001222;transcript_name=HG00140_ch_T0001222;gene_name=BCORP1;ID=intron:HG00140_ch_T0001222:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19746467	19746546	.	-	.	source_transcript=ENST00000760995.1;source_transcript_name=BCORP1-211;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001222;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001222;transcript_name=HG00140_ch_T0001222;gene_name=BCORP1;ID=exon:HG00140_ch_T0001222:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19746547	19764292	.	-	.	source_transcript=ENST00000760995.1;source_transcript_name=BCORP1-211;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001222;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001222;transcript_name=HG00140_ch_T0001222;gene_name=BCORP1;ID=intron:HG00140_ch_T0001222:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764293	19764393	.	-	.	source_transcript=ENST00000760995.1;source_transcript_name=BCORP1-211;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001222;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001222;transcript_name=HG00140_ch_T0001222;gene_name=BCORP1;ID=exon:HG00140_ch_T0001222:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19773234	.	-	.	source_transcript=ENST00000760995.1;source_transcript_name=BCORP1-211;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001222;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001222;transcript_name=HG00140_ch_T0001222;gene_name=BCORP1;ID=intron:HG00140_ch_T0001222:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773262	.	-	.	source_transcript=ENST00000760995.1;source_transcript_name=BCORP1-211;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001222;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001222;transcript_name=HG00140_ch_T0001222;gene_name=BCORP1;ID=exon:HG00140_ch_T0001222:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19745788	19773279	1000	-	.	source_transcript=ENST00000760996.1;source_transcript_name=BCORP1-212;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760996.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760996.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001223;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001223;gene_name=BCORP1;ID=HG00140_ch_T0001223;Name=BCORP1
HG00140_chrY	CAT	exon	19745788	19746066	.	-	.	source_transcript=ENST00000760996.1;source_transcript_name=BCORP1-212;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760996.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760996.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001223;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001223;transcript_name=HG00140_ch_T0001223;gene_name=BCORP1;ID=exon:HG00140_ch_T0001223:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19746067	19746434	.	-	.	source_transcript=ENST00000760996.1;source_transcript_name=BCORP1-212;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760996.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760996.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001223;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001223;transcript_name=HG00140_ch_T0001223;gene_name=BCORP1;ID=intron:HG00140_ch_T0001223:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19746435	19746546	.	-	.	source_transcript=ENST00000760996.1;source_transcript_name=BCORP1-212;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760996.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760996.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001223;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001223;transcript_name=HG00140_ch_T0001223;gene_name=BCORP1;ID=exon:HG00140_ch_T0001223:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19746547	19773234	.	-	.	source_transcript=ENST00000760996.1;source_transcript_name=BCORP1-212;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760996.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760996.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001223;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001223;transcript_name=HG00140_ch_T0001223;gene_name=BCORP1;ID=intron:HG00140_ch_T0001223:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773279	.	-	.	source_transcript=ENST00000760996.1;source_transcript_name=BCORP1-212;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760996.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760996.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001223;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001223;transcript_name=HG00140_ch_T0001223;gene_name=BCORP1;ID=exon:HG00140_ch_T0001223:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19745815	19773262	1000	-	.	source_transcript=ENST00000760997.1;source_transcript_name=BCORP1-213;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760997.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760997.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001224;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001224;gene_name=BCORP1;ID=HG00140_ch_T0001224;Name=BCORP1
HG00140_chrY	CAT	exon	19745815	19746066	.	-	.	source_transcript=ENST00000760997.1;source_transcript_name=BCORP1-213;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760997.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760997.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001224;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001224;transcript_name=HG00140_ch_T0001224;gene_name=BCORP1;ID=exon:HG00140_ch_T0001224:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19746067	19764276	.	-	.	source_transcript=ENST00000760997.1;source_transcript_name=BCORP1-213;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760997.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760997.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001224;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001224;transcript_name=HG00140_ch_T0001224;gene_name=BCORP1;ID=intron:HG00140_ch_T0001224:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764277	19764393	.	-	.	source_transcript=ENST00000760997.1;source_transcript_name=BCORP1-213;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760997.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760997.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001224;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001224;transcript_name=HG00140_ch_T0001224;gene_name=BCORP1;ID=exon:HG00140_ch_T0001224:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19773234	.	-	.	source_transcript=ENST00000760997.1;source_transcript_name=BCORP1-213;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760997.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760997.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001224;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001224;transcript_name=HG00140_ch_T0001224;gene_name=BCORP1;ID=intron:HG00140_ch_T0001224:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773262	.	-	.	source_transcript=ENST00000760997.1;source_transcript_name=BCORP1-213;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760997.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760997.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001224;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001224;transcript_name=HG00140_ch_T0001224;gene_name=BCORP1;ID=exon:HG00140_ch_T0001224:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19746155	19773301	1000	-	.	source_transcript=ENST00000760998.1;source_transcript_name=BCORP1-214;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760998.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760998.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001225;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001225;gene_name=BCORP1;ID=HG00140_ch_T0001225;Name=BCORP1
HG00140_chrY	CAT	exon	19746155	19746546	.	-	.	source_transcript=ENST00000760998.1;source_transcript_name=BCORP1-214;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760998.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760998.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001225;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001225;transcript_name=HG00140_ch_T0001225;gene_name=BCORP1;ID=exon:HG00140_ch_T0001225:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19746547	19764292	.	-	.	source_transcript=ENST00000760998.1;source_transcript_name=BCORP1-214;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760998.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760998.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001225;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001225;transcript_name=HG00140_ch_T0001225;gene_name=BCORP1;ID=intron:HG00140_ch_T0001225:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764293	19764393	.	-	.	source_transcript=ENST00000760998.1;source_transcript_name=BCORP1-214;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760998.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760998.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001225;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001225;transcript_name=HG00140_ch_T0001225;gene_name=BCORP1;ID=exon:HG00140_ch_T0001225:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19773234	.	-	.	source_transcript=ENST00000760998.1;source_transcript_name=BCORP1-214;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760998.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760998.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001225;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001225;transcript_name=HG00140_ch_T0001225;gene_name=BCORP1;ID=intron:HG00140_ch_T0001225:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773301	.	-	.	source_transcript=ENST00000760998.1;source_transcript_name=BCORP1-214;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760998.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760998.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001225;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001225;transcript_name=HG00140_ch_T0001225;gene_name=BCORP1;ID=exon:HG00140_ch_T0001225:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19760179	19773304	1000	-	.	source_transcript=ENST00000651484.1;source_transcript_name=BCORP1-205;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651484.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651484.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001226;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001226;gene_name=BCORP1;ID=HG00140_ch_T0001226;Name=BCORP1
HG00140_chrY	CAT	exon	19760179	19763065	.	-	.	source_transcript=ENST00000651484.1;source_transcript_name=BCORP1-205;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651484.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651484.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001226;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001226;transcript_name=HG00140_ch_T0001226;gene_name=BCORP1;ID=exon:HG00140_ch_T0001226:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19763066	19763482	.	-	.	source_transcript=ENST00000651484.1;source_transcript_name=BCORP1-205;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651484.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651484.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001226;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001226;transcript_name=HG00140_ch_T0001226;gene_name=BCORP1;ID=intron:HG00140_ch_T0001226:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19763483	19763542	.	-	.	source_transcript=ENST00000651484.1;source_transcript_name=BCORP1-205;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651484.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651484.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001226;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001226;transcript_name=HG00140_ch_T0001226;gene_name=BCORP1;ID=exon:HG00140_ch_T0001226:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19763543	19764292	.	-	.	source_transcript=ENST00000651484.1;source_transcript_name=BCORP1-205;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651484.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651484.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001226;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001226;transcript_name=HG00140_ch_T0001226;gene_name=BCORP1;ID=intron:HG00140_ch_T0001226:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764293	19764393	.	-	.	source_transcript=ENST00000651484.1;source_transcript_name=BCORP1-205;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651484.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651484.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001226;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001226;transcript_name=HG00140_ch_T0001226;gene_name=BCORP1;ID=exon:HG00140_ch_T0001226:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19773234	.	-	.	source_transcript=ENST00000651484.1;source_transcript_name=BCORP1-205;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651484.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651484.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001226;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001226;transcript_name=HG00140_ch_T0001226;gene_name=BCORP1;ID=intron:HG00140_ch_T0001226:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773304	.	-	.	source_transcript=ENST00000651484.1;source_transcript_name=BCORP1-205;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651484.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651484.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001226;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001226;transcript_name=HG00140_ch_T0001226;gene_name=BCORP1;ID=exon:HG00140_ch_T0001226:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19761129	19773521	1000	-	.	source_transcript=ENST00000693243.3;source_transcript_name=BCORP1-206;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693243.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000693243.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001227;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001227;gene_name=BCORP1;ID=HG00140_ch_T0001227;Name=BCORP1
HG00140_chrY	CAT	exon	19761129	19761807	.	-	.	source_transcript=ENST00000693243.3;source_transcript_name=BCORP1-206;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693243.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000693243.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001227;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001227;transcript_name=HG00140_ch_T0001227;gene_name=BCORP1;ID=exon:HG00140_ch_T0001227:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19761808	19763482	.	-	.	source_transcript=ENST00000693243.3;source_transcript_name=BCORP1-206;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693243.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000693243.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001227;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001227;transcript_name=HG00140_ch_T0001227;gene_name=BCORP1;ID=intron:HG00140_ch_T0001227:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19763483	19763542	.	-	.	source_transcript=ENST00000693243.3;source_transcript_name=BCORP1-206;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693243.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000693243.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001227;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001227;transcript_name=HG00140_ch_T0001227;gene_name=BCORP1;ID=exon:HG00140_ch_T0001227:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19763543	19764292	.	-	.	source_transcript=ENST00000693243.3;source_transcript_name=BCORP1-206;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693243.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000693243.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001227;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001227;transcript_name=HG00140_ch_T0001227;gene_name=BCORP1;ID=intron:HG00140_ch_T0001227:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764293	19764393	.	-	.	source_transcript=ENST00000693243.3;source_transcript_name=BCORP1-206;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693243.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000693243.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001227;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001227;transcript_name=HG00140_ch_T0001227;gene_name=BCORP1;ID=exon:HG00140_ch_T0001227:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19773234	.	-	.	source_transcript=ENST00000693243.3;source_transcript_name=BCORP1-206;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693243.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000693243.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001227;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001227;transcript_name=HG00140_ch_T0001227;gene_name=BCORP1;ID=intron:HG00140_ch_T0001227:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773521	.	-	.	source_transcript=ENST00000693243.3;source_transcript_name=BCORP1-206;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693243.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000693243.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001227;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001227;transcript_name=HG00140_ch_T0001227;gene_name=BCORP1;ID=exon:HG00140_ch_T0001227:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19761639	19773508	1000	-	.	source_transcript=ENST00000761003.1;source_transcript_name=BCORP1-219;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761003.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761003.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001228;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001228;gene_name=BCORP1;ID=HG00140_ch_T0001228;Name=BCORP1
HG00140_chrY	CAT	exon	19761639	19761807	.	-	.	source_transcript=ENST00000761003.1;source_transcript_name=BCORP1-219;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761003.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761003.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001228;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001228;transcript_name=HG00140_ch_T0001228;gene_name=BCORP1;ID=exon:HG00140_ch_T0001228:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19761808	19763482	.	-	.	source_transcript=ENST00000761003.1;source_transcript_name=BCORP1-219;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761003.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761003.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001228;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001228;transcript_name=HG00140_ch_T0001228;gene_name=BCORP1;ID=intron:HG00140_ch_T0001228:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19763483	19763542	.	-	.	source_transcript=ENST00000761003.1;source_transcript_name=BCORP1-219;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761003.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761003.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001228;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001228;transcript_name=HG00140_ch_T0001228;gene_name=BCORP1;ID=exon:HG00140_ch_T0001228:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19763543	19764276	.	-	.	source_transcript=ENST00000761003.1;source_transcript_name=BCORP1-219;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761003.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761003.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001228;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001228;transcript_name=HG00140_ch_T0001228;gene_name=BCORP1;ID=intron:HG00140_ch_T0001228:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764277	19764393	.	-	.	source_transcript=ENST00000761003.1;source_transcript_name=BCORP1-219;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761003.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761003.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001228;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001228;transcript_name=HG00140_ch_T0001228;gene_name=BCORP1;ID=exon:HG00140_ch_T0001228:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19773234	.	-	.	source_transcript=ENST00000761003.1;source_transcript_name=BCORP1-219;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761003.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761003.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001228;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001228;transcript_name=HG00140_ch_T0001228;gene_name=BCORP1;ID=intron:HG00140_ch_T0001228:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773508	.	-	.	source_transcript=ENST00000761003.1;source_transcript_name=BCORP1-219;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761003.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761003.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001228;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001228;transcript_name=HG00140_ch_T0001228;gene_name=BCORP1;ID=exon:HG00140_ch_T0001228:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19761641	19773517	1000	-	.	source_transcript=ENST00000761001.1;source_transcript_name=BCORP1-217;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761001.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761001.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001229;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001229;gene_name=BCORP1;ID=HG00140_ch_T0001229;Name=BCORP1
HG00140_chrY	CAT	exon	19761641	19761807	.	-	.	source_transcript=ENST00000761001.1;source_transcript_name=BCORP1-217;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761001.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761001.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001229;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001229;transcript_name=HG00140_ch_T0001229;gene_name=BCORP1;ID=exon:HG00140_ch_T0001229:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19761808	19764276	.	-	.	source_transcript=ENST00000761001.1;source_transcript_name=BCORP1-217;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761001.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761001.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001229;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001229;transcript_name=HG00140_ch_T0001229;gene_name=BCORP1;ID=intron:HG00140_ch_T0001229:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764277	19764393	.	-	.	source_transcript=ENST00000761001.1;source_transcript_name=BCORP1-217;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761001.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761001.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001229;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001229;transcript_name=HG00140_ch_T0001229;gene_name=BCORP1;ID=exon:HG00140_ch_T0001229:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19773234	.	-	.	source_transcript=ENST00000761001.1;source_transcript_name=BCORP1-217;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761001.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761001.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001229;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001229;transcript_name=HG00140_ch_T0001229;gene_name=BCORP1;ID=intron:HG00140_ch_T0001229:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773517	.	-	.	source_transcript=ENST00000761001.1;source_transcript_name=BCORP1-217;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761001.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761001.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001229;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001229;transcript_name=HG00140_ch_T0001229;gene_name=BCORP1;ID=exon:HG00140_ch_T0001229:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19761641	19773517	1000	-	.	source_transcript=ENST00000761002.1;source_transcript_name=BCORP1-218;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761002.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761002.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001230;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001230;gene_name=BCORP1;ID=HG00140_ch_T0001230;Name=BCORP1
HG00140_chrY	CAT	exon	19761641	19761807	.	-	.	source_transcript=ENST00000761002.1;source_transcript_name=BCORP1-218;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761002.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761002.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001230;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001230;transcript_name=HG00140_ch_T0001230;gene_name=BCORP1;ID=exon:HG00140_ch_T0001230:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19761808	19764292	.	-	.	source_transcript=ENST00000761002.1;source_transcript_name=BCORP1-218;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761002.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761002.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001230;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001230;transcript_name=HG00140_ch_T0001230;gene_name=BCORP1;ID=intron:HG00140_ch_T0001230:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764293	19764393	.	-	.	source_transcript=ENST00000761002.1;source_transcript_name=BCORP1-218;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761002.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761002.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001230;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001230;transcript_name=HG00140_ch_T0001230;gene_name=BCORP1;ID=exon:HG00140_ch_T0001230:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19773234	.	-	.	source_transcript=ENST00000761002.1;source_transcript_name=BCORP1-218;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761002.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761002.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001230;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001230;transcript_name=HG00140_ch_T0001230;gene_name=BCORP1;ID=intron:HG00140_ch_T0001230:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773517	.	-	.	source_transcript=ENST00000761002.1;source_transcript_name=BCORP1-218;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761002.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761002.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001230;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001230;transcript_name=HG00140_ch_T0001230;gene_name=BCORP1;ID=exon:HG00140_ch_T0001230:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19761643	19773523	1000	-	.	source_transcript=ENST00000761000.1;source_transcript_name=BCORP1-216;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761000.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001231;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001231;gene_name=BCORP1;ID=HG00140_ch_T0001231;Name=BCORP1
HG00140_chrY	CAT	exon	19761643	19761807	.	-	.	source_transcript=ENST00000761000.1;source_transcript_name=BCORP1-216;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761000.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001231;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001231;transcript_name=HG00140_ch_T0001231;gene_name=BCORP1;ID=exon:HG00140_ch_T0001231:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19761808	19764292	.	-	.	source_transcript=ENST00000761000.1;source_transcript_name=BCORP1-216;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761000.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001231;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001231;transcript_name=HG00140_ch_T0001231;gene_name=BCORP1;ID=intron:HG00140_ch_T0001231:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764293	19764393	.	-	.	source_transcript=ENST00000761000.1;source_transcript_name=BCORP1-216;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761000.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001231;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001231;transcript_name=HG00140_ch_T0001231;gene_name=BCORP1;ID=exon:HG00140_ch_T0001231:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19765592	.	-	.	source_transcript=ENST00000761000.1;source_transcript_name=BCORP1-216;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761000.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001231;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001231;transcript_name=HG00140_ch_T0001231;gene_name=BCORP1;ID=intron:HG00140_ch_T0001231:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19765593	19765672	.	-	.	source_transcript=ENST00000761000.1;source_transcript_name=BCORP1-216;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761000.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001231;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001231;transcript_name=HG00140_ch_T0001231;gene_name=BCORP1;ID=exon:HG00140_ch_T0001231:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19765673	19773234	.	-	.	source_transcript=ENST00000761000.1;source_transcript_name=BCORP1-216;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761000.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001231;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001231;transcript_name=HG00140_ch_T0001231;gene_name=BCORP1;ID=intron:HG00140_ch_T0001231:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773523	.	-	.	source_transcript=ENST00000761000.1;source_transcript_name=BCORP1-216;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761000.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001231;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001231;transcript_name=HG00140_ch_T0001231;gene_name=BCORP1;ID=exon:HG00140_ch_T0001231:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19761643	19773292	1000	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001232;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001232;gene_name=BCORP1;ID=HG00140_ch_T0001232;Name=BCORP1
HG00140_chrY	CAT	exon	19761643	19761807	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001232;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001232;transcript_name=HG00140_ch_T0001232;gene_name=BCORP1;ID=exon:HG00140_ch_T0001232:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19761808	19762102	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001232;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001232;transcript_name=HG00140_ch_T0001232;gene_name=BCORP1;ID=intron:HG00140_ch_T0001232:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19762103	19762217	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001232;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001232;transcript_name=HG00140_ch_T0001232;gene_name=BCORP1;ID=exon:HG00140_ch_T0001232:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19762218	19762308	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001232;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001232;transcript_name=HG00140_ch_T0001232;gene_name=BCORP1;ID=intron:HG00140_ch_T0001232:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19762309	19762437	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001232;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001232;transcript_name=HG00140_ch_T0001232;gene_name=BCORP1;ID=exon:HG00140_ch_T0001232:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19762438	19763482	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001232;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001232;transcript_name=HG00140_ch_T0001232;gene_name=BCORP1;ID=intron:HG00140_ch_T0001232:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19763483	19763542	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001232;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001232;transcript_name=HG00140_ch_T0001232;gene_name=BCORP1;ID=exon:HG00140_ch_T0001232:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19763543	19764276	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001232;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001232;transcript_name=HG00140_ch_T0001232;gene_name=BCORP1;ID=intron:HG00140_ch_T0001232:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764277	19764393	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001232;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001232;transcript_name=HG00140_ch_T0001232;gene_name=BCORP1;ID=exon:HG00140_ch_T0001232:4;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19773234	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001232;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001232;transcript_name=HG00140_ch_T0001232;gene_name=BCORP1;ID=intron:HG00140_ch_T0001232:4;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773292	.	-	.	source_transcript=ENST00000761021.1;source_transcript_name=BCORP1-237;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761021.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761021.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001232;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001232;transcript_name=HG00140_ch_T0001232;gene_name=BCORP1;ID=exon:HG00140_ch_T0001232:5;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19761643	19773297	1000	-	.	source_transcript=ENST00000761015.1;source_transcript_name=BCORP1-231;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761015.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001233;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001233;gene_name=BCORP1;ID=HG00140_ch_T0001233;Name=BCORP1
HG00140_chrY	CAT	exon	19761643	19762442	.	-	.	source_transcript=ENST00000761015.1;source_transcript_name=BCORP1-231;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001233;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001233;transcript_name=HG00140_ch_T0001233;gene_name=BCORP1;ID=exon:HG00140_ch_T0001233:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19762443	19763482	.	-	.	source_transcript=ENST00000761015.1;source_transcript_name=BCORP1-231;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001233;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001233;transcript_name=HG00140_ch_T0001233;gene_name=BCORP1;ID=intron:HG00140_ch_T0001233:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19763483	19763542	.	-	.	source_transcript=ENST00000761015.1;source_transcript_name=BCORP1-231;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001233;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001233;transcript_name=HG00140_ch_T0001233;gene_name=BCORP1;ID=exon:HG00140_ch_T0001233:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19763543	19764276	.	-	.	source_transcript=ENST00000761015.1;source_transcript_name=BCORP1-231;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001233;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001233;transcript_name=HG00140_ch_T0001233;gene_name=BCORP1;ID=intron:HG00140_ch_T0001233:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764277	19764393	.	-	.	source_transcript=ENST00000761015.1;source_transcript_name=BCORP1-231;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001233;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001233;transcript_name=HG00140_ch_T0001233;gene_name=BCORP1;ID=exon:HG00140_ch_T0001233:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19773234	.	-	.	source_transcript=ENST00000761015.1;source_transcript_name=BCORP1-231;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001233;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001233;transcript_name=HG00140_ch_T0001233;gene_name=BCORP1;ID=intron:HG00140_ch_T0001233:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773297	.	-	.	source_transcript=ENST00000761015.1;source_transcript_name=BCORP1-231;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001233;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001233;transcript_name=HG00140_ch_T0001233;gene_name=BCORP1;ID=exon:HG00140_ch_T0001233:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19761643	19773283	1000	-	.	source_transcript=ENST00000761028.1;source_transcript_name=BCORP1-244;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761028.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001234;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001234;gene_name=BCORP1;ID=HG00140_ch_T0001234;Name=BCORP1
HG00140_chrY	CAT	exon	19761643	19761807	.	-	.	source_transcript=ENST00000761028.1;source_transcript_name=BCORP1-244;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001234;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001234;transcript_name=HG00140_ch_T0001234;gene_name=BCORP1;ID=exon:HG00140_ch_T0001234:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19761808	19762263	.	-	.	source_transcript=ENST00000761028.1;source_transcript_name=BCORP1-244;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001234;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001234;transcript_name=HG00140_ch_T0001234;gene_name=BCORP1;ID=intron:HG00140_ch_T0001234:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19762264	19762442	.	-	.	source_transcript=ENST00000761028.1;source_transcript_name=BCORP1-244;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001234;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001234;transcript_name=HG00140_ch_T0001234;gene_name=BCORP1;ID=exon:HG00140_ch_T0001234:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19762443	19764276	.	-	.	source_transcript=ENST00000761028.1;source_transcript_name=BCORP1-244;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001234;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001234;transcript_name=HG00140_ch_T0001234;gene_name=BCORP1;ID=intron:HG00140_ch_T0001234:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764277	19764393	.	-	.	source_transcript=ENST00000761028.1;source_transcript_name=BCORP1-244;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001234;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001234;transcript_name=HG00140_ch_T0001234;gene_name=BCORP1;ID=exon:HG00140_ch_T0001234:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19773234	.	-	.	source_transcript=ENST00000761028.1;source_transcript_name=BCORP1-244;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001234;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001234;transcript_name=HG00140_ch_T0001234;gene_name=BCORP1;ID=intron:HG00140_ch_T0001234:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773283	.	-	.	source_transcript=ENST00000761028.1;source_transcript_name=BCORP1-244;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001234;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001234;transcript_name=HG00140_ch_T0001234;gene_name=BCORP1;ID=exon:HG00140_ch_T0001234:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19761643	19773469	1000	-	.	source_transcript=ENST00000761010.1;source_transcript_name=BCORP1-226;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761010.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001235;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001235;gene_name=BCORP1;ID=HG00140_ch_T0001235;Name=BCORP1
HG00140_chrY	CAT	exon	19761643	19761807	.	-	.	source_transcript=ENST00000761010.1;source_transcript_name=BCORP1-226;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761010.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001235;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001235;transcript_name=HG00140_ch_T0001235;gene_name=BCORP1;ID=exon:HG00140_ch_T0001235:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19761808	19763482	.	-	.	source_transcript=ENST00000761010.1;source_transcript_name=BCORP1-226;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761010.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001235;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001235;transcript_name=HG00140_ch_T0001235;gene_name=BCORP1;ID=intron:HG00140_ch_T0001235:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19763483	19763542	.	-	.	source_transcript=ENST00000761010.1;source_transcript_name=BCORP1-226;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761010.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001235;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001235;transcript_name=HG00140_ch_T0001235;gene_name=BCORP1;ID=exon:HG00140_ch_T0001235:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19763543	19764292	.	-	.	source_transcript=ENST00000761010.1;source_transcript_name=BCORP1-226;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761010.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001235;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001235;transcript_name=HG00140_ch_T0001235;gene_name=BCORP1;ID=intron:HG00140_ch_T0001235:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764293	19764393	.	-	.	source_transcript=ENST00000761010.1;source_transcript_name=BCORP1-226;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761010.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001235;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001235;transcript_name=HG00140_ch_T0001235;gene_name=BCORP1;ID=exon:HG00140_ch_T0001235:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19765592	.	-	.	source_transcript=ENST00000761010.1;source_transcript_name=BCORP1-226;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761010.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001235;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001235;transcript_name=HG00140_ch_T0001235;gene_name=BCORP1;ID=intron:HG00140_ch_T0001235:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19765593	19765672	.	-	.	source_transcript=ENST00000761010.1;source_transcript_name=BCORP1-226;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761010.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001235;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001235;transcript_name=HG00140_ch_T0001235;gene_name=BCORP1;ID=exon:HG00140_ch_T0001235:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19765673	19773234	.	-	.	source_transcript=ENST00000761010.1;source_transcript_name=BCORP1-226;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761010.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001235;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001235;transcript_name=HG00140_ch_T0001235;gene_name=BCORP1;ID=intron:HG00140_ch_T0001235:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773469	.	-	.	source_transcript=ENST00000761010.1;source_transcript_name=BCORP1-226;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761010.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761010.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001235;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001235;transcript_name=HG00140_ch_T0001235;gene_name=BCORP1;ID=exon:HG00140_ch_T0001235:4;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19761643	19773260	1000	-	.	source_transcript=ENST00000761043.1;source_transcript_name=BCORP1-259;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761043.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001236;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001236;gene_name=BCORP1;ID=HG00140_ch_T0001236;Name=BCORP1
HG00140_chrY	CAT	exon	19761643	19761807	.	-	.	source_transcript=ENST00000761043.1;source_transcript_name=BCORP1-259;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001236;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001236;transcript_name=HG00140_ch_T0001236;gene_name=BCORP1;ID=exon:HG00140_ch_T0001236:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19761808	19762263	.	-	.	source_transcript=ENST00000761043.1;source_transcript_name=BCORP1-259;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001236;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001236;transcript_name=HG00140_ch_T0001236;gene_name=BCORP1;ID=intron:HG00140_ch_T0001236:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19762264	19762362	.	-	.	source_transcript=ENST00000761043.1;source_transcript_name=BCORP1-259;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001236;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001236;transcript_name=HG00140_ch_T0001236;gene_name=BCORP1;ID=exon:HG00140_ch_T0001236:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19762363	19763482	.	-	.	source_transcript=ENST00000761043.1;source_transcript_name=BCORP1-259;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001236;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001236;transcript_name=HG00140_ch_T0001236;gene_name=BCORP1;ID=intron:HG00140_ch_T0001236:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19763483	19763542	.	-	.	source_transcript=ENST00000761043.1;source_transcript_name=BCORP1-259;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001236;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001236;transcript_name=HG00140_ch_T0001236;gene_name=BCORP1;ID=exon:HG00140_ch_T0001236:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19763543	19764276	.	-	.	source_transcript=ENST00000761043.1;source_transcript_name=BCORP1-259;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001236;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001236;transcript_name=HG00140_ch_T0001236;gene_name=BCORP1;ID=intron:HG00140_ch_T0001236:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764277	19764393	.	-	.	source_transcript=ENST00000761043.1;source_transcript_name=BCORP1-259;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001236;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001236;transcript_name=HG00140_ch_T0001236;gene_name=BCORP1;ID=exon:HG00140_ch_T0001236:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19773234	.	-	.	source_transcript=ENST00000761043.1;source_transcript_name=BCORP1-259;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001236;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001236;transcript_name=HG00140_ch_T0001236;gene_name=BCORP1;ID=intron:HG00140_ch_T0001236:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773260	.	-	.	source_transcript=ENST00000761043.1;source_transcript_name=BCORP1-259;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001236;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001236;transcript_name=HG00140_ch_T0001236;gene_name=BCORP1;ID=exon:HG00140_ch_T0001236:4;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19761643	19773264	1000	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001237;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001237;gene_name=BCORP1;ID=HG00140_ch_T0001237;Name=BCORP1
HG00140_chrY	CAT	exon	19761643	19761807	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001237;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001237;transcript_name=HG00140_ch_T0001237;gene_name=BCORP1;ID=exon:HG00140_ch_T0001237:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19761808	19762102	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001237;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001237;transcript_name=HG00140_ch_T0001237;gene_name=BCORP1;ID=intron:HG00140_ch_T0001237:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19762103	19762217	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001237;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001237;transcript_name=HG00140_ch_T0001237;gene_name=BCORP1;ID=exon:HG00140_ch_T0001237:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19762218	19763482	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001237;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001237;transcript_name=HG00140_ch_T0001237;gene_name=BCORP1;ID=intron:HG00140_ch_T0001237:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19763483	19763542	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001237;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001237;transcript_name=HG00140_ch_T0001237;gene_name=BCORP1;ID=exon:HG00140_ch_T0001237:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19763543	19764292	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001237;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001237;transcript_name=HG00140_ch_T0001237;gene_name=BCORP1;ID=intron:HG00140_ch_T0001237:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764293	19764393	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001237;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001237;transcript_name=HG00140_ch_T0001237;gene_name=BCORP1;ID=exon:HG00140_ch_T0001237:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19765592	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001237;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001237;transcript_name=HG00140_ch_T0001237;gene_name=BCORP1;ID=intron:HG00140_ch_T0001237:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19765593	19765672	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001237;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001237;transcript_name=HG00140_ch_T0001237;gene_name=BCORP1;ID=exon:HG00140_ch_T0001237:4;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19765673	19773234	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001237;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001237;transcript_name=HG00140_ch_T0001237;gene_name=BCORP1;ID=intron:HG00140_ch_T0001237:4;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773264	.	-	.	source_transcript=ENST00000761034.1;source_transcript_name=BCORP1-250;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001237;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001237;transcript_name=HG00140_ch_T0001237;gene_name=BCORP1;ID=exon:HG00140_ch_T0001237:5;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19761643	19773262	1000	-	.	source_transcript=ENST00000761035.1;source_transcript_name=BCORP1-251;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761035.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001238;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001238;gene_name=BCORP1;ID=HG00140_ch_T0001238;Name=BCORP1
HG00140_chrY	CAT	exon	19761643	19761807	.	-	.	source_transcript=ENST00000761035.1;source_transcript_name=BCORP1-251;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001238;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001238;transcript_name=HG00140_ch_T0001238;gene_name=BCORP1;ID=exon:HG00140_ch_T0001238:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19761808	19763482	.	-	.	source_transcript=ENST00000761035.1;source_transcript_name=BCORP1-251;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001238;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001238;transcript_name=HG00140_ch_T0001238;gene_name=BCORP1;ID=intron:HG00140_ch_T0001238:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19763483	19763542	.	-	.	source_transcript=ENST00000761035.1;source_transcript_name=BCORP1-251;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001238;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001238;transcript_name=HG00140_ch_T0001238;gene_name=BCORP1;ID=exon:HG00140_ch_T0001238:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19763543	19764276	.	-	.	source_transcript=ENST00000761035.1;source_transcript_name=BCORP1-251;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001238;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001238;transcript_name=HG00140_ch_T0001238;gene_name=BCORP1;ID=intron:HG00140_ch_T0001238:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764277	19764393	.	-	.	source_transcript=ENST00000761035.1;source_transcript_name=BCORP1-251;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001238;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001238;transcript_name=HG00140_ch_T0001238;gene_name=BCORP1;ID=exon:HG00140_ch_T0001238:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19764866	.	-	.	source_transcript=ENST00000761035.1;source_transcript_name=BCORP1-251;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001238;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001238;transcript_name=HG00140_ch_T0001238;gene_name=BCORP1;ID=intron:HG00140_ch_T0001238:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764867	19764941	.	-	.	source_transcript=ENST00000761035.1;source_transcript_name=BCORP1-251;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001238;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001238;transcript_name=HG00140_ch_T0001238;gene_name=BCORP1;ID=exon:HG00140_ch_T0001238:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764942	19773234	.	-	.	source_transcript=ENST00000761035.1;source_transcript_name=BCORP1-251;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001238;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001238;transcript_name=HG00140_ch_T0001238;gene_name=BCORP1;ID=intron:HG00140_ch_T0001238:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773262	.	-	.	source_transcript=ENST00000761035.1;source_transcript_name=BCORP1-251;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001238;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001238;transcript_name=HG00140_ch_T0001238;gene_name=BCORP1;ID=exon:HG00140_ch_T0001238:4;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19761643	19773262	1000	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001239;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001239;gene_name=BCORP1;ID=HG00140_ch_T0001239;Name=BCORP1
HG00140_chrY	CAT	exon	19761643	19761807	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001239;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001239;transcript_name=HG00140_ch_T0001239;gene_name=BCORP1;ID=exon:HG00140_ch_T0001239:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19761808	19762102	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001239;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001239;transcript_name=HG00140_ch_T0001239;gene_name=BCORP1;ID=intron:HG00140_ch_T0001239:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19762103	19762217	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001239;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001239;transcript_name=HG00140_ch_T0001239;gene_name=BCORP1;ID=exon:HG00140_ch_T0001239:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19762218	19762308	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001239;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001239;transcript_name=HG00140_ch_T0001239;gene_name=BCORP1;ID=intron:HG00140_ch_T0001239:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19762309	19762362	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001239;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001239;transcript_name=HG00140_ch_T0001239;gene_name=BCORP1;ID=exon:HG00140_ch_T0001239:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19762363	19764292	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001239;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001239;transcript_name=HG00140_ch_T0001239;gene_name=BCORP1;ID=intron:HG00140_ch_T0001239:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764293	19764393	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001239;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001239;transcript_name=HG00140_ch_T0001239;gene_name=BCORP1;ID=exon:HG00140_ch_T0001239:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19765592	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001239;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001239;transcript_name=HG00140_ch_T0001239;gene_name=BCORP1;ID=intron:HG00140_ch_T0001239:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19765593	19765672	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001239;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001239;transcript_name=HG00140_ch_T0001239;gene_name=BCORP1;ID=exon:HG00140_ch_T0001239:4;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19765673	19773234	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001239;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001239;transcript_name=HG00140_ch_T0001239;gene_name=BCORP1;ID=intron:HG00140_ch_T0001239:4;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773262	.	-	.	source_transcript=ENST00000761039.1;source_transcript_name=BCORP1-255;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001239;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001239;transcript_name=HG00140_ch_T0001239;gene_name=BCORP1;ID=exon:HG00140_ch_T0001239:5;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19761643	19773260	1000	-	.	source_transcript=ENST00000761042.1;source_transcript_name=BCORP1-258;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761042.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001240;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001240;gene_name=BCORP1;ID=HG00140_ch_T0001240;Name=BCORP1
HG00140_chrY	CAT	exon	19761643	19761807	.	-	.	source_transcript=ENST00000761042.1;source_transcript_name=BCORP1-258;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001240;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001240;transcript_name=HG00140_ch_T0001240;gene_name=BCORP1;ID=exon:HG00140_ch_T0001240:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19761808	19762102	.	-	.	source_transcript=ENST00000761042.1;source_transcript_name=BCORP1-258;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001240;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001240;transcript_name=HG00140_ch_T0001240;gene_name=BCORP1;ID=intron:HG00140_ch_T0001240:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19762103	19762217	.	-	.	source_transcript=ENST00000761042.1;source_transcript_name=BCORP1-258;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001240;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001240;transcript_name=HG00140_ch_T0001240;gene_name=BCORP1;ID=exon:HG00140_ch_T0001240:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19762218	19764292	.	-	.	source_transcript=ENST00000761042.1;source_transcript_name=BCORP1-258;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001240;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001240;transcript_name=HG00140_ch_T0001240;gene_name=BCORP1;ID=intron:HG00140_ch_T0001240:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764293	19764393	.	-	.	source_transcript=ENST00000761042.1;source_transcript_name=BCORP1-258;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001240;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001240;transcript_name=HG00140_ch_T0001240;gene_name=BCORP1;ID=exon:HG00140_ch_T0001240:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19773229	.	-	.	source_transcript=ENST00000761042.1;source_transcript_name=BCORP1-258;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001240;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001240;transcript_name=HG00140_ch_T0001240;gene_name=BCORP1;ID=intron:HG00140_ch_T0001240:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773230	19773260	.	-	.	source_transcript=ENST00000761042.1;source_transcript_name=BCORP1-258;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001240;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001240;transcript_name=HG00140_ch_T0001240;gene_name=BCORP1;ID=exon:HG00140_ch_T0001240:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19761643	19773297	1000	-	.	source_transcript=ENST00000761017.1;source_transcript_name=BCORP1-233;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761017.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001241;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001241;gene_name=BCORP1;ID=HG00140_ch_T0001241;Name=BCORP1
HG00140_chrY	CAT	exon	19761643	19761807	.	-	.	source_transcript=ENST00000761017.1;source_transcript_name=BCORP1-233;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761017.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001241;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001241;transcript_name=HG00140_ch_T0001241;gene_name=BCORP1;ID=exon:HG00140_ch_T0001241:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19761808	19764292	.	-	.	source_transcript=ENST00000761017.1;source_transcript_name=BCORP1-233;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761017.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001241;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001241;transcript_name=HG00140_ch_T0001241;gene_name=BCORP1;ID=intron:HG00140_ch_T0001241:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764293	19764393	.	-	.	source_transcript=ENST00000761017.1;source_transcript_name=BCORP1-233;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761017.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001241;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001241;transcript_name=HG00140_ch_T0001241;gene_name=BCORP1;ID=exon:HG00140_ch_T0001241:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19765592	.	-	.	source_transcript=ENST00000761017.1;source_transcript_name=BCORP1-233;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761017.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001241;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001241;transcript_name=HG00140_ch_T0001241;gene_name=BCORP1;ID=intron:HG00140_ch_T0001241:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19765593	19765677	.	-	.	source_transcript=ENST00000761017.1;source_transcript_name=BCORP1-233;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761017.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001241;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001241;transcript_name=HG00140_ch_T0001241;gene_name=BCORP1;ID=exon:HG00140_ch_T0001241:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19765678	19773234	.	-	.	source_transcript=ENST00000761017.1;source_transcript_name=BCORP1-233;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761017.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001241;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001241;transcript_name=HG00140_ch_T0001241;gene_name=BCORP1;ID=intron:HG00140_ch_T0001241:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773297	.	-	.	source_transcript=ENST00000761017.1;source_transcript_name=BCORP1-233;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761017.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761017.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001241;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001241;transcript_name=HG00140_ch_T0001241;gene_name=BCORP1;ID=exon:HG00140_ch_T0001241:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19761643	19773481	1000	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001242;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001242;gene_name=BCORP1;ID=HG00140_ch_T0001242;Name=BCORP1
HG00140_chrY	CAT	exon	19761643	19761807	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001242;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001242;transcript_name=HG00140_ch_T0001242;gene_name=BCORP1;ID=exon:HG00140_ch_T0001242:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19761808	19762102	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001242;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001242;transcript_name=HG00140_ch_T0001242;gene_name=BCORP1;ID=intron:HG00140_ch_T0001242:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19762103	19762217	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001242;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001242;transcript_name=HG00140_ch_T0001242;gene_name=BCORP1;ID=exon:HG00140_ch_T0001242:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19762218	19762308	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001242;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001242;transcript_name=HG00140_ch_T0001242;gene_name=BCORP1;ID=intron:HG00140_ch_T0001242:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19762309	19762442	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001242;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001242;transcript_name=HG00140_ch_T0001242;gene_name=BCORP1;ID=exon:HG00140_ch_T0001242:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19762443	19763482	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001242;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001242;transcript_name=HG00140_ch_T0001242;gene_name=BCORP1;ID=intron:HG00140_ch_T0001242:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19763483	19763542	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001242;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001242;transcript_name=HG00140_ch_T0001242;gene_name=BCORP1;ID=exon:HG00140_ch_T0001242:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19763543	19764292	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001242;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001242;transcript_name=HG00140_ch_T0001242;gene_name=BCORP1;ID=intron:HG00140_ch_T0001242:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764293	19764393	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001242;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001242;transcript_name=HG00140_ch_T0001242;gene_name=BCORP1;ID=exon:HG00140_ch_T0001242:4;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19773234	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001242;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001242;transcript_name=HG00140_ch_T0001242;gene_name=BCORP1;ID=intron:HG00140_ch_T0001242:4;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773481	.	-	.	source_transcript=ENST00000761008.1;source_transcript_name=BCORP1-224;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001242;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001242;transcript_name=HG00140_ch_T0001242;gene_name=BCORP1;ID=exon:HG00140_ch_T0001242:5;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19761643	19773292	1000	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001243;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001243;gene_name=BCORP1;ID=HG00140_ch_T0001243;Name=BCORP1
HG00140_chrY	CAT	exon	19761643	19761807	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001243;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001243;transcript_name=HG00140_ch_T0001243;gene_name=BCORP1;ID=exon:HG00140_ch_T0001243:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19761808	19762102	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001243;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001243;transcript_name=HG00140_ch_T0001243;gene_name=BCORP1;ID=intron:HG00140_ch_T0001243:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19762103	19762217	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001243;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001243;transcript_name=HG00140_ch_T0001243;gene_name=BCORP1;ID=exon:HG00140_ch_T0001243:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19762218	19762308	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001243;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001243;transcript_name=HG00140_ch_T0001243;gene_name=BCORP1;ID=intron:HG00140_ch_T0001243:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19762309	19762442	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001243;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001243;transcript_name=HG00140_ch_T0001243;gene_name=BCORP1;ID=exon:HG00140_ch_T0001243:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19762443	19763482	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001243;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001243;transcript_name=HG00140_ch_T0001243;gene_name=BCORP1;ID=intron:HG00140_ch_T0001243:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19763483	19763542	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001243;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001243;transcript_name=HG00140_ch_T0001243;gene_name=BCORP1;ID=exon:HG00140_ch_T0001243:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19763543	19764276	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001243;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001243;transcript_name=HG00140_ch_T0001243;gene_name=BCORP1;ID=intron:HG00140_ch_T0001243:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764277	19764393	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001243;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001243;transcript_name=HG00140_ch_T0001243;gene_name=BCORP1;ID=exon:HG00140_ch_T0001243:4;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19773234	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001243;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001243;transcript_name=HG00140_ch_T0001243;gene_name=BCORP1;ID=intron:HG00140_ch_T0001243:4;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773292	.	-	.	source_transcript=ENST00000761023.1;source_transcript_name=BCORP1-239;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761023.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761023.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001243;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001243;transcript_name=HG00140_ch_T0001243;gene_name=BCORP1;ID=exon:HG00140_ch_T0001243:5;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19761643	19773301	1000	-	.	source_transcript=ENST00000761014.1;source_transcript_name=BCORP1-230;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761014.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001244;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001244;gene_name=BCORP1;ID=HG00140_ch_T0001244;Name=BCORP1
HG00140_chrY	CAT	exon	19761643	19763065	.	-	.	source_transcript=ENST00000761014.1;source_transcript_name=BCORP1-230;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001244;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001244;transcript_name=HG00140_ch_T0001244;gene_name=BCORP1;ID=exon:HG00140_ch_T0001244:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19763066	19763482	.	-	.	source_transcript=ENST00000761014.1;source_transcript_name=BCORP1-230;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001244;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001244;transcript_name=HG00140_ch_T0001244;gene_name=BCORP1;ID=intron:HG00140_ch_T0001244:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19763483	19763542	.	-	.	source_transcript=ENST00000761014.1;source_transcript_name=BCORP1-230;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001244;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001244;transcript_name=HG00140_ch_T0001244;gene_name=BCORP1;ID=exon:HG00140_ch_T0001244:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19763543	19764276	.	-	.	source_transcript=ENST00000761014.1;source_transcript_name=BCORP1-230;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001244;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001244;transcript_name=HG00140_ch_T0001244;gene_name=BCORP1;ID=intron:HG00140_ch_T0001244:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764277	19764393	.	-	.	source_transcript=ENST00000761014.1;source_transcript_name=BCORP1-230;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001244;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001244;transcript_name=HG00140_ch_T0001244;gene_name=BCORP1;ID=exon:HG00140_ch_T0001244:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19773234	.	-	.	source_transcript=ENST00000761014.1;source_transcript_name=BCORP1-230;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001244;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001244;transcript_name=HG00140_ch_T0001244;gene_name=BCORP1;ID=intron:HG00140_ch_T0001244:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773301	.	-	.	source_transcript=ENST00000761014.1;source_transcript_name=BCORP1-230;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761014.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001244;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001244;transcript_name=HG00140_ch_T0001244;gene_name=BCORP1;ID=exon:HG00140_ch_T0001244:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19761643	19773260	1000	-	.	source_transcript=ENST00000761041.1;source_transcript_name=BCORP1-257;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761041.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001245;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001245;gene_name=BCORP1;ID=HG00140_ch_T0001245;Name=BCORP1
HG00140_chrY	CAT	exon	19761643	19761807	.	-	.	source_transcript=ENST00000761041.1;source_transcript_name=BCORP1-257;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001245;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001245;transcript_name=HG00140_ch_T0001245;gene_name=BCORP1;ID=exon:HG00140_ch_T0001245:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19761808	19762102	.	-	.	source_transcript=ENST00000761041.1;source_transcript_name=BCORP1-257;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001245;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001245;transcript_name=HG00140_ch_T0001245;gene_name=BCORP1;ID=intron:HG00140_ch_T0001245:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19762103	19762217	.	-	.	source_transcript=ENST00000761041.1;source_transcript_name=BCORP1-257;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001245;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001245;transcript_name=HG00140_ch_T0001245;gene_name=BCORP1;ID=exon:HG00140_ch_T0001245:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19762218	19764292	.	-	.	source_transcript=ENST00000761041.1;source_transcript_name=BCORP1-257;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001245;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001245;transcript_name=HG00140_ch_T0001245;gene_name=BCORP1;ID=intron:HG00140_ch_T0001245:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764293	19764393	.	-	.	source_transcript=ENST00000761041.1;source_transcript_name=BCORP1-257;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001245;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001245;transcript_name=HG00140_ch_T0001245;gene_name=BCORP1;ID=exon:HG00140_ch_T0001245:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19764866	.	-	.	source_transcript=ENST00000761041.1;source_transcript_name=BCORP1-257;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001245;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001245;transcript_name=HG00140_ch_T0001245;gene_name=BCORP1;ID=intron:HG00140_ch_T0001245:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764867	19764922	.	-	.	source_transcript=ENST00000761041.1;source_transcript_name=BCORP1-257;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001245;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001245;transcript_name=HG00140_ch_T0001245;gene_name=BCORP1;ID=exon:HG00140_ch_T0001245:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764923	19773234	.	-	.	source_transcript=ENST00000761041.1;source_transcript_name=BCORP1-257;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001245;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001245;transcript_name=HG00140_ch_T0001245;gene_name=BCORP1;ID=intron:HG00140_ch_T0001245:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773260	.	-	.	source_transcript=ENST00000761041.1;source_transcript_name=BCORP1-257;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001245;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001245;transcript_name=HG00140_ch_T0001245;gene_name=BCORP1;ID=exon:HG00140_ch_T0001245:4;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19761643	19773290	1000	-	.	source_transcript=ENST00000761024.1;source_transcript_name=BCORP1-240;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761024.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761024.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001246;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001246;gene_name=BCORP1;ID=HG00140_ch_T0001246;Name=BCORP1
HG00140_chrY	CAT	exon	19761643	19761807	.	-	.	source_transcript=ENST00000761024.1;source_transcript_name=BCORP1-240;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761024.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761024.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001246;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001246;transcript_name=HG00140_ch_T0001246;gene_name=BCORP1;ID=exon:HG00140_ch_T0001246:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19761808	19764276	.	-	.	source_transcript=ENST00000761024.1;source_transcript_name=BCORP1-240;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761024.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761024.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001246;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001246;transcript_name=HG00140_ch_T0001246;gene_name=BCORP1;ID=intron:HG00140_ch_T0001246:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764277	19764393	.	-	.	source_transcript=ENST00000761024.1;source_transcript_name=BCORP1-240;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761024.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761024.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001246;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001246;transcript_name=HG00140_ch_T0001246;gene_name=BCORP1;ID=exon:HG00140_ch_T0001246:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19773229	.	-	.	source_transcript=ENST00000761024.1;source_transcript_name=BCORP1-240;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761024.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761024.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001246;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001246;transcript_name=HG00140_ch_T0001246;gene_name=BCORP1;ID=intron:HG00140_ch_T0001246:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773230	19773290	.	-	.	source_transcript=ENST00000761024.1;source_transcript_name=BCORP1-240;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761024.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761024.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001246;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001246;transcript_name=HG00140_ch_T0001246;gene_name=BCORP1;ID=exon:HG00140_ch_T0001246:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19761643	19773340	1000	-	.	source_transcript=ENST00000761012.1;source_transcript_name=BCORP1-228;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761012.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001247;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001247;gene_name=BCORP1;ID=HG00140_ch_T0001247;Name=BCORP1
HG00140_chrY	CAT	exon	19761643	19761807	.	-	.	source_transcript=ENST00000761012.1;source_transcript_name=BCORP1-228;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761012.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001247;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001247;transcript_name=HG00140_ch_T0001247;gene_name=BCORP1;ID=exon:HG00140_ch_T0001247:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19761808	19763482	.	-	.	source_transcript=ENST00000761012.1;source_transcript_name=BCORP1-228;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761012.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001247;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001247;transcript_name=HG00140_ch_T0001247;gene_name=BCORP1;ID=intron:HG00140_ch_T0001247:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19763483	19763542	.	-	.	source_transcript=ENST00000761012.1;source_transcript_name=BCORP1-228;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761012.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001247;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001247;transcript_name=HG00140_ch_T0001247;gene_name=BCORP1;ID=exon:HG00140_ch_T0001247:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19763543	19764292	.	-	.	source_transcript=ENST00000761012.1;source_transcript_name=BCORP1-228;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761012.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001247;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001247;transcript_name=HG00140_ch_T0001247;gene_name=BCORP1;ID=intron:HG00140_ch_T0001247:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764293	19764393	.	-	.	source_transcript=ENST00000761012.1;source_transcript_name=BCORP1-228;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761012.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001247;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001247;transcript_name=HG00140_ch_T0001247;gene_name=BCORP1;ID=exon:HG00140_ch_T0001247:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19773229	.	-	.	source_transcript=ENST00000761012.1;source_transcript_name=BCORP1-228;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761012.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001247;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001247;transcript_name=HG00140_ch_T0001247;gene_name=BCORP1;ID=intron:HG00140_ch_T0001247:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773230	19773340	.	-	.	source_transcript=ENST00000761012.1;source_transcript_name=BCORP1-228;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761012.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761012.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001247;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001247;transcript_name=HG00140_ch_T0001247;gene_name=BCORP1;ID=exon:HG00140_ch_T0001247:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19761643	19773351	1000	-	.	source_transcript=ENST00000761011.1;source_transcript_name=BCORP1-227;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761011.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761011.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001248;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001248;gene_name=BCORP1;ID=HG00140_ch_T0001248;Name=BCORP1
HG00140_chrY	CAT	exon	19761643	19761807	.	-	.	source_transcript=ENST00000761011.1;source_transcript_name=BCORP1-227;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761011.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761011.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001248;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001248;transcript_name=HG00140_ch_T0001248;gene_name=BCORP1;ID=exon:HG00140_ch_T0001248:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19761808	19762102	.	-	.	source_transcript=ENST00000761011.1;source_transcript_name=BCORP1-227;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761011.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761011.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001248;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001248;transcript_name=HG00140_ch_T0001248;gene_name=BCORP1;ID=intron:HG00140_ch_T0001248:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19762103	19762217	.	-	.	source_transcript=ENST00000761011.1;source_transcript_name=BCORP1-227;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761011.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761011.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001248;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001248;transcript_name=HG00140_ch_T0001248;gene_name=BCORP1;ID=exon:HG00140_ch_T0001248:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19762218	19764292	.	-	.	source_transcript=ENST00000761011.1;source_transcript_name=BCORP1-227;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761011.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761011.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001248;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001248;transcript_name=HG00140_ch_T0001248;gene_name=BCORP1;ID=intron:HG00140_ch_T0001248:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764293	19764393	.	-	.	source_transcript=ENST00000761011.1;source_transcript_name=BCORP1-227;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761011.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761011.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001248;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001248;transcript_name=HG00140_ch_T0001248;gene_name=BCORP1;ID=exon:HG00140_ch_T0001248:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19773234	.	-	.	source_transcript=ENST00000761011.1;source_transcript_name=BCORP1-227;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761011.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761011.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001248;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001248;transcript_name=HG00140_ch_T0001248;gene_name=BCORP1;ID=intron:HG00140_ch_T0001248:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773351	.	-	.	source_transcript=ENST00000761011.1;source_transcript_name=BCORP1-227;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761011.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761011.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001248;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001248;transcript_name=HG00140_ch_T0001248;gene_name=BCORP1;ID=exon:HG00140_ch_T0001248:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19761643	19773282	1000	-	.	source_transcript=ENST00000761029.1;source_transcript_name=BCORP1-245;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761029.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001249;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001249;gene_name=BCORP1;ID=HG00140_ch_T0001249;Name=BCORP1
HG00140_chrY	CAT	exon	19761643	19761807	.	-	.	source_transcript=ENST00000761029.1;source_transcript_name=BCORP1-245;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001249;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001249;transcript_name=HG00140_ch_T0001249;gene_name=BCORP1;ID=exon:HG00140_ch_T0001249:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19761808	19762102	.	-	.	source_transcript=ENST00000761029.1;source_transcript_name=BCORP1-245;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001249;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001249;transcript_name=HG00140_ch_T0001249;gene_name=BCORP1;ID=intron:HG00140_ch_T0001249:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19762103	19762221	.	-	.	source_transcript=ENST00000761029.1;source_transcript_name=BCORP1-245;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001249;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001249;transcript_name=HG00140_ch_T0001249;gene_name=BCORP1;ID=exon:HG00140_ch_T0001249:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19762222	19764276	.	-	.	source_transcript=ENST00000761029.1;source_transcript_name=BCORP1-245;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001249;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001249;transcript_name=HG00140_ch_T0001249;gene_name=BCORP1;ID=intron:HG00140_ch_T0001249:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764277	19764393	.	-	.	source_transcript=ENST00000761029.1;source_transcript_name=BCORP1-245;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001249;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001249;transcript_name=HG00140_ch_T0001249;gene_name=BCORP1;ID=exon:HG00140_ch_T0001249:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19773234	.	-	.	source_transcript=ENST00000761029.1;source_transcript_name=BCORP1-245;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001249;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001249;transcript_name=HG00140_ch_T0001249;gene_name=BCORP1;ID=intron:HG00140_ch_T0001249:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773282	.	-	.	source_transcript=ENST00000761029.1;source_transcript_name=BCORP1-245;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001249;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001249;transcript_name=HG00140_ch_T0001249;gene_name=BCORP1;ID=exon:HG00140_ch_T0001249:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19761643	19773262	1000	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001250;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001250;gene_name=BCORP1;ID=HG00140_ch_T0001250;Name=BCORP1
HG00140_chrY	CAT	exon	19761643	19761807	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001250;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001250;transcript_name=HG00140_ch_T0001250;gene_name=BCORP1;ID=exon:HG00140_ch_T0001250:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19761808	19763482	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001250;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001250;transcript_name=HG00140_ch_T0001250;gene_name=BCORP1;ID=intron:HG00140_ch_T0001250:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19763483	19763542	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001250;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001250;transcript_name=HG00140_ch_T0001250;gene_name=BCORP1;ID=exon:HG00140_ch_T0001250:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19763543	19764292	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001250;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001250;transcript_name=HG00140_ch_T0001250;gene_name=BCORP1;ID=intron:HG00140_ch_T0001250:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764293	19764393	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001250;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001250;transcript_name=HG00140_ch_T0001250;gene_name=BCORP1;ID=exon:HG00140_ch_T0001250:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19764866	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001250;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001250;transcript_name=HG00140_ch_T0001250;gene_name=BCORP1;ID=intron:HG00140_ch_T0001250:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764867	19764947	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001250;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001250;transcript_name=HG00140_ch_T0001250;gene_name=BCORP1;ID=exon:HG00140_ch_T0001250:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764948	19765592	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001250;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001250;transcript_name=HG00140_ch_T0001250;gene_name=BCORP1;ID=intron:HG00140_ch_T0001250:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19765593	19765672	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001250;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001250;transcript_name=HG00140_ch_T0001250;gene_name=BCORP1;ID=exon:HG00140_ch_T0001250:4;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19765673	19773234	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001250;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001250;transcript_name=HG00140_ch_T0001250;gene_name=BCORP1;ID=intron:HG00140_ch_T0001250:4;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773262	.	-	.	source_transcript=ENST00000761037.1;source_transcript_name=BCORP1-253;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001250;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001250;transcript_name=HG00140_ch_T0001250;gene_name=BCORP1;ID=exon:HG00140_ch_T0001250:5;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19761643	19773288	1000	-	.	source_transcript=ENST00000761025.1;source_transcript_name=BCORP1-241;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761025.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761025.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001251;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001251;gene_name=BCORP1;ID=HG00140_ch_T0001251;Name=BCORP1
HG00140_chrY	CAT	exon	19761643	19761807	.	-	.	source_transcript=ENST00000761025.1;source_transcript_name=BCORP1-241;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761025.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761025.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001251;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001251;transcript_name=HG00140_ch_T0001251;gene_name=BCORP1;ID=exon:HG00140_ch_T0001251:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19761808	19762102	.	-	.	source_transcript=ENST00000761025.1;source_transcript_name=BCORP1-241;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761025.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761025.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001251;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001251;transcript_name=HG00140_ch_T0001251;gene_name=BCORP1;ID=intron:HG00140_ch_T0001251:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19762103	19762217	.	-	.	source_transcript=ENST00000761025.1;source_transcript_name=BCORP1-241;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761025.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761025.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001251;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001251;transcript_name=HG00140_ch_T0001251;gene_name=BCORP1;ID=exon:HG00140_ch_T0001251:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19762218	19764276	.	-	.	source_transcript=ENST00000761025.1;source_transcript_name=BCORP1-241;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761025.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761025.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001251;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001251;transcript_name=HG00140_ch_T0001251;gene_name=BCORP1;ID=intron:HG00140_ch_T0001251:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764277	19764393	.	-	.	source_transcript=ENST00000761025.1;source_transcript_name=BCORP1-241;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761025.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761025.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001251;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001251;transcript_name=HG00140_ch_T0001251;gene_name=BCORP1;ID=exon:HG00140_ch_T0001251:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19773234	.	-	.	source_transcript=ENST00000761025.1;source_transcript_name=BCORP1-241;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761025.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761025.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001251;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001251;transcript_name=HG00140_ch_T0001251;gene_name=BCORP1;ID=intron:HG00140_ch_T0001251:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773288	.	-	.	source_transcript=ENST00000761025.1;source_transcript_name=BCORP1-241;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761025.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761025.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001251;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001251;transcript_name=HG00140_ch_T0001251;gene_name=BCORP1;ID=exon:HG00140_ch_T0001251:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19761643	19773501	1000	-	.	source_transcript=ENST00000761004.1;source_transcript_name=BCORP1-220;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761004.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761004.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001252;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001252;gene_name=BCORP1;ID=HG00140_ch_T0001252;Name=BCORP1
HG00140_chrY	CAT	exon	19761643	19761807	.	-	.	source_transcript=ENST00000761004.1;source_transcript_name=BCORP1-220;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761004.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761004.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001252;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001252;transcript_name=HG00140_ch_T0001252;gene_name=BCORP1;ID=exon:HG00140_ch_T0001252:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19761808	19764276	.	-	.	source_transcript=ENST00000761004.1;source_transcript_name=BCORP1-220;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761004.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761004.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001252;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001252;transcript_name=HG00140_ch_T0001252;gene_name=BCORP1;ID=intron:HG00140_ch_T0001252:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764277	19764393	.	-	.	source_transcript=ENST00000761004.1;source_transcript_name=BCORP1-220;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761004.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761004.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001252;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001252;transcript_name=HG00140_ch_T0001252;gene_name=BCORP1;ID=exon:HG00140_ch_T0001252:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19765592	.	-	.	source_transcript=ENST00000761004.1;source_transcript_name=BCORP1-220;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761004.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761004.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001252;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001252;transcript_name=HG00140_ch_T0001252;gene_name=BCORP1;ID=intron:HG00140_ch_T0001252:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19765593	19765672	.	-	.	source_transcript=ENST00000761004.1;source_transcript_name=BCORP1-220;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761004.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761004.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001252;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001252;transcript_name=HG00140_ch_T0001252;gene_name=BCORP1;ID=exon:HG00140_ch_T0001252:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19765673	19773234	.	-	.	source_transcript=ENST00000761004.1;source_transcript_name=BCORP1-220;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761004.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761004.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001252;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001252;transcript_name=HG00140_ch_T0001252;gene_name=BCORP1;ID=intron:HG00140_ch_T0001252:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773501	.	-	.	source_transcript=ENST00000761004.1;source_transcript_name=BCORP1-220;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761004.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761004.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001252;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001252;transcript_name=HG00140_ch_T0001252;gene_name=BCORP1;ID=exon:HG00140_ch_T0001252:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19761643	19773268	1000	-	.	source_transcript=ENST00000761032.1;source_transcript_name=BCORP1-248;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761032.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001253;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001253;gene_name=BCORP1;ID=HG00140_ch_T0001253;Name=BCORP1
HG00140_chrY	CAT	exon	19761643	19761807	.	-	.	source_transcript=ENST00000761032.1;source_transcript_name=BCORP1-248;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001253;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001253;transcript_name=HG00140_ch_T0001253;gene_name=BCORP1;ID=exon:HG00140_ch_T0001253:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19761808	19764292	.	-	.	source_transcript=ENST00000761032.1;source_transcript_name=BCORP1-248;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001253;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001253;transcript_name=HG00140_ch_T0001253;gene_name=BCORP1;ID=intron:HG00140_ch_T0001253:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764293	19764393	.	-	.	source_transcript=ENST00000761032.1;source_transcript_name=BCORP1-248;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001253;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001253;transcript_name=HG00140_ch_T0001253;gene_name=BCORP1;ID=exon:HG00140_ch_T0001253:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19765592	.	-	.	source_transcript=ENST00000761032.1;source_transcript_name=BCORP1-248;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001253;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001253;transcript_name=HG00140_ch_T0001253;gene_name=BCORP1;ID=intron:HG00140_ch_T0001253:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19765593	19765672	.	-	.	source_transcript=ENST00000761032.1;source_transcript_name=BCORP1-248;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001253;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001253;transcript_name=HG00140_ch_T0001253;gene_name=BCORP1;ID=exon:HG00140_ch_T0001253:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19765673	19773229	.	-	.	source_transcript=ENST00000761032.1;source_transcript_name=BCORP1-248;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001253;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001253;transcript_name=HG00140_ch_T0001253;gene_name=BCORP1;ID=intron:HG00140_ch_T0001253:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773230	19773268	.	-	.	source_transcript=ENST00000761032.1;source_transcript_name=BCORP1-248;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761032.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761032.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001253;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001253;transcript_name=HG00140_ch_T0001253;gene_name=BCORP1;ID=exon:HG00140_ch_T0001253:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19761643	19773297	1000	-	.	source_transcript=ENST00000761019.1;source_transcript_name=BCORP1-235;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761019.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001254;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001254;gene_name=BCORP1;ID=HG00140_ch_T0001254;Name=BCORP1
HG00140_chrY	CAT	exon	19761643	19761807	.	-	.	source_transcript=ENST00000761019.1;source_transcript_name=BCORP1-235;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761019.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001254;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001254;transcript_name=HG00140_ch_T0001254;gene_name=BCORP1;ID=exon:HG00140_ch_T0001254:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19761808	19763482	.	-	.	source_transcript=ENST00000761019.1;source_transcript_name=BCORP1-235;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761019.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001254;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001254;transcript_name=HG00140_ch_T0001254;gene_name=BCORP1;ID=intron:HG00140_ch_T0001254:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19763483	19763542	.	-	.	source_transcript=ENST00000761019.1;source_transcript_name=BCORP1-235;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761019.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001254;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001254;transcript_name=HG00140_ch_T0001254;gene_name=BCORP1;ID=exon:HG00140_ch_T0001254:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19763543	19764276	.	-	.	source_transcript=ENST00000761019.1;source_transcript_name=BCORP1-235;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761019.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001254;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001254;transcript_name=HG00140_ch_T0001254;gene_name=BCORP1;ID=intron:HG00140_ch_T0001254:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764277	19764393	.	-	.	source_transcript=ENST00000761019.1;source_transcript_name=BCORP1-235;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761019.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001254;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001254;transcript_name=HG00140_ch_T0001254;gene_name=BCORP1;ID=exon:HG00140_ch_T0001254:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19765592	.	-	.	source_transcript=ENST00000761019.1;source_transcript_name=BCORP1-235;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761019.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001254;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001254;transcript_name=HG00140_ch_T0001254;gene_name=BCORP1;ID=intron:HG00140_ch_T0001254:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19765593	19765672	.	-	.	source_transcript=ENST00000761019.1;source_transcript_name=BCORP1-235;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761019.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001254;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001254;transcript_name=HG00140_ch_T0001254;gene_name=BCORP1;ID=exon:HG00140_ch_T0001254:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19765673	19773234	.	-	.	source_transcript=ENST00000761019.1;source_transcript_name=BCORP1-235;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761019.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001254;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001254;transcript_name=HG00140_ch_T0001254;gene_name=BCORP1;ID=intron:HG00140_ch_T0001254:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773297	.	-	.	source_transcript=ENST00000761019.1;source_transcript_name=BCORP1-235;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761019.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761019.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001254;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001254;transcript_name=HG00140_ch_T0001254;gene_name=BCORP1;ID=exon:HG00140_ch_T0001254:4;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19761643	19773474	1000	-	.	source_transcript=ENST00000761009.1;source_transcript_name=BCORP1-225;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761009.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761009.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001255;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001255;gene_name=BCORP1;ID=HG00140_ch_T0001255;Name=BCORP1
HG00140_chrY	CAT	exon	19761643	19761807	.	-	.	source_transcript=ENST00000761009.1;source_transcript_name=BCORP1-225;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761009.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761009.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001255;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001255;transcript_name=HG00140_ch_T0001255;gene_name=BCORP1;ID=exon:HG00140_ch_T0001255:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19761808	19773234	.	-	.	source_transcript=ENST00000761009.1;source_transcript_name=BCORP1-225;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761009.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761009.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001255;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001255;transcript_name=HG00140_ch_T0001255;gene_name=BCORP1;ID=intron:HG00140_ch_T0001255:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773474	.	-	.	source_transcript=ENST00000761009.1;source_transcript_name=BCORP1-225;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761009.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761009.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001255;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001255;transcript_name=HG00140_ch_T0001255;gene_name=BCORP1;ID=exon:HG00140_ch_T0001255:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19761643	19773292	1000	-	.	source_transcript=ENST00000761022.1;source_transcript_name=BCORP1-238;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761022.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001256;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001256;gene_name=BCORP1;ID=HG00140_ch_T0001256;Name=BCORP1
HG00140_chrY	CAT	exon	19761643	19762442	.	-	.	source_transcript=ENST00000761022.1;source_transcript_name=BCORP1-238;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761022.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001256;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001256;transcript_name=HG00140_ch_T0001256;gene_name=BCORP1;ID=exon:HG00140_ch_T0001256:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19762443	19763482	.	-	.	source_transcript=ENST00000761022.1;source_transcript_name=BCORP1-238;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761022.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001256;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001256;transcript_name=HG00140_ch_T0001256;gene_name=BCORP1;ID=intron:HG00140_ch_T0001256:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19763483	19763542	.	-	.	source_transcript=ENST00000761022.1;source_transcript_name=BCORP1-238;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761022.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001256;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001256;transcript_name=HG00140_ch_T0001256;gene_name=BCORP1;ID=exon:HG00140_ch_T0001256:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19763543	19764292	.	-	.	source_transcript=ENST00000761022.1;source_transcript_name=BCORP1-238;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761022.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001256;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001256;transcript_name=HG00140_ch_T0001256;gene_name=BCORP1;ID=intron:HG00140_ch_T0001256:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764293	19764393	.	-	.	source_transcript=ENST00000761022.1;source_transcript_name=BCORP1-238;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761022.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001256;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001256;transcript_name=HG00140_ch_T0001256;gene_name=BCORP1;ID=exon:HG00140_ch_T0001256:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19773234	.	-	.	source_transcript=ENST00000761022.1;source_transcript_name=BCORP1-238;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761022.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001256;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001256;transcript_name=HG00140_ch_T0001256;gene_name=BCORP1;ID=intron:HG00140_ch_T0001256:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773292	.	-	.	source_transcript=ENST00000761022.1;source_transcript_name=BCORP1-238;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761022.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761022.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001256;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001256;transcript_name=HG00140_ch_T0001256;gene_name=BCORP1;ID=exon:HG00140_ch_T0001256:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19761643	19773260	1000	-	.	source_transcript=ENST00000761040.1;source_transcript_name=BCORP1-256;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761040.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001257;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001257;gene_name=BCORP1;ID=HG00140_ch_T0001257;Name=BCORP1
HG00140_chrY	CAT	exon	19761643	19761807	.	-	.	source_transcript=ENST00000761040.1;source_transcript_name=BCORP1-256;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001257;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001257;transcript_name=HG00140_ch_T0001257;gene_name=BCORP1;ID=exon:HG00140_ch_T0001257:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19761808	19763482	.	-	.	source_transcript=ENST00000761040.1;source_transcript_name=BCORP1-256;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001257;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001257;transcript_name=HG00140_ch_T0001257;gene_name=BCORP1;ID=intron:HG00140_ch_T0001257:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19763483	19763542	.	-	.	source_transcript=ENST00000761040.1;source_transcript_name=BCORP1-256;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001257;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001257;transcript_name=HG00140_ch_T0001257;gene_name=BCORP1;ID=exon:HG00140_ch_T0001257:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19763543	19764276	.	-	.	source_transcript=ENST00000761040.1;source_transcript_name=BCORP1-256;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001257;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001257;transcript_name=HG00140_ch_T0001257;gene_name=BCORP1;ID=intron:HG00140_ch_T0001257:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764277	19764393	.	-	.	source_transcript=ENST00000761040.1;source_transcript_name=BCORP1-256;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001257;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001257;transcript_name=HG00140_ch_T0001257;gene_name=BCORP1;ID=exon:HG00140_ch_T0001257:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19765592	.	-	.	source_transcript=ENST00000761040.1;source_transcript_name=BCORP1-256;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001257;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001257;transcript_name=HG00140_ch_T0001257;gene_name=BCORP1;ID=intron:HG00140_ch_T0001257:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19765593	19765677	.	-	.	source_transcript=ENST00000761040.1;source_transcript_name=BCORP1-256;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001257;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001257;transcript_name=HG00140_ch_T0001257;gene_name=BCORP1;ID=exon:HG00140_ch_T0001257:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19765678	19773234	.	-	.	source_transcript=ENST00000761040.1;source_transcript_name=BCORP1-256;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001257;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001257;transcript_name=HG00140_ch_T0001257;gene_name=BCORP1;ID=intron:HG00140_ch_T0001257:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773260	.	-	.	source_transcript=ENST00000761040.1;source_transcript_name=BCORP1-256;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001257;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001257;transcript_name=HG00140_ch_T0001257;gene_name=BCORP1;ID=exon:HG00140_ch_T0001257:4;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19761643	19773277	1000	-	.	source_transcript=ENST00000761031.1;source_transcript_name=BCORP1-247;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761031.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001258;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001258;gene_name=BCORP1;ID=HG00140_ch_T0001258;Name=BCORP1
HG00140_chrY	CAT	exon	19761643	19761807	.	-	.	source_transcript=ENST00000761031.1;source_transcript_name=BCORP1-247;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001258;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001258;transcript_name=HG00140_ch_T0001258;gene_name=BCORP1;ID=exon:HG00140_ch_T0001258:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19761808	19763482	.	-	.	source_transcript=ENST00000761031.1;source_transcript_name=BCORP1-247;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001258;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001258;transcript_name=HG00140_ch_T0001258;gene_name=BCORP1;ID=intron:HG00140_ch_T0001258:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19763483	19763542	.	-	.	source_transcript=ENST00000761031.1;source_transcript_name=BCORP1-247;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001258;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001258;transcript_name=HG00140_ch_T0001258;gene_name=BCORP1;ID=exon:HG00140_ch_T0001258:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19763543	19764127	.	-	.	source_transcript=ENST00000761031.1;source_transcript_name=BCORP1-247;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001258;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001258;transcript_name=HG00140_ch_T0001258;gene_name=BCORP1;ID=intron:HG00140_ch_T0001258:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764128	19764229	.	-	.	source_transcript=ENST00000761031.1;source_transcript_name=BCORP1-247;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001258;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001258;transcript_name=HG00140_ch_T0001258;gene_name=BCORP1;ID=exon:HG00140_ch_T0001258:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764230	19773234	.	-	.	source_transcript=ENST00000761031.1;source_transcript_name=BCORP1-247;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001258;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001258;transcript_name=HG00140_ch_T0001258;gene_name=BCORP1;ID=intron:HG00140_ch_T0001258:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773277	.	-	.	source_transcript=ENST00000761031.1;source_transcript_name=BCORP1-247;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001258;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001258;transcript_name=HG00140_ch_T0001258;gene_name=BCORP1;ID=exon:HG00140_ch_T0001258:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19761643	19773297	1000	-	.	source_transcript=ENST00000761016.1;source_transcript_name=BCORP1-232;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761016.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001259;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001259;gene_name=BCORP1;ID=HG00140_ch_T0001259;Name=BCORP1
HG00140_chrY	CAT	exon	19761643	19761807	.	-	.	source_transcript=ENST00000761016.1;source_transcript_name=BCORP1-232;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001259;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001259;transcript_name=HG00140_ch_T0001259;gene_name=BCORP1;ID=exon:HG00140_ch_T0001259:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19761808	19763482	.	-	.	source_transcript=ENST00000761016.1;source_transcript_name=BCORP1-232;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001259;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001259;transcript_name=HG00140_ch_T0001259;gene_name=BCORP1;ID=intron:HG00140_ch_T0001259:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19763483	19763542	.	-	.	source_transcript=ENST00000761016.1;source_transcript_name=BCORP1-232;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001259;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001259;transcript_name=HG00140_ch_T0001259;gene_name=BCORP1;ID=exon:HG00140_ch_T0001259:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19763543	19764276	.	-	.	source_transcript=ENST00000761016.1;source_transcript_name=BCORP1-232;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001259;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001259;transcript_name=HG00140_ch_T0001259;gene_name=BCORP1;ID=intron:HG00140_ch_T0001259:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764277	19764393	.	-	.	source_transcript=ENST00000761016.1;source_transcript_name=BCORP1-232;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001259;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001259;transcript_name=HG00140_ch_T0001259;gene_name=BCORP1;ID=exon:HG00140_ch_T0001259:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19764866	.	-	.	source_transcript=ENST00000761016.1;source_transcript_name=BCORP1-232;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001259;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001259;transcript_name=HG00140_ch_T0001259;gene_name=BCORP1;ID=intron:HG00140_ch_T0001259:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764867	19764947	.	-	.	source_transcript=ENST00000761016.1;source_transcript_name=BCORP1-232;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001259;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001259;transcript_name=HG00140_ch_T0001259;gene_name=BCORP1;ID=exon:HG00140_ch_T0001259:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764948	19773234	.	-	.	source_transcript=ENST00000761016.1;source_transcript_name=BCORP1-232;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001259;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001259;transcript_name=HG00140_ch_T0001259;gene_name=BCORP1;ID=intron:HG00140_ch_T0001259:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773297	.	-	.	source_transcript=ENST00000761016.1;source_transcript_name=BCORP1-232;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001259;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001259;transcript_name=HG00140_ch_T0001259;gene_name=BCORP1;ID=exon:HG00140_ch_T0001259:4;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19761643	19773297	1000	-	.	source_transcript=ENST00000761018.1;source_transcript_name=BCORP1-234;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761018.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001260;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001260;gene_name=BCORP1;ID=HG00140_ch_T0001260;Name=BCORP1
HG00140_chrY	CAT	exon	19761643	19761807	.	-	.	source_transcript=ENST00000761018.1;source_transcript_name=BCORP1-234;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761018.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001260;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001260;transcript_name=HG00140_ch_T0001260;gene_name=BCORP1;ID=exon:HG00140_ch_T0001260:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19761808	19763482	.	-	.	source_transcript=ENST00000761018.1;source_transcript_name=BCORP1-234;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761018.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001260;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001260;transcript_name=HG00140_ch_T0001260;gene_name=BCORP1;ID=intron:HG00140_ch_T0001260:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19763483	19763542	.	-	.	source_transcript=ENST00000761018.1;source_transcript_name=BCORP1-234;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761018.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001260;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001260;transcript_name=HG00140_ch_T0001260;gene_name=BCORP1;ID=exon:HG00140_ch_T0001260:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19763543	19764276	.	-	.	source_transcript=ENST00000761018.1;source_transcript_name=BCORP1-234;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761018.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001260;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001260;transcript_name=HG00140_ch_T0001260;gene_name=BCORP1;ID=intron:HG00140_ch_T0001260:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764277	19764393	.	-	.	source_transcript=ENST00000761018.1;source_transcript_name=BCORP1-234;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761018.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001260;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001260;transcript_name=HG00140_ch_T0001260;gene_name=BCORP1;ID=exon:HG00140_ch_T0001260:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19773229	.	-	.	source_transcript=ENST00000761018.1;source_transcript_name=BCORP1-234;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761018.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001260;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001260;transcript_name=HG00140_ch_T0001260;gene_name=BCORP1;ID=intron:HG00140_ch_T0001260:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773230	19773297	.	-	.	source_transcript=ENST00000761018.1;source_transcript_name=BCORP1-234;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761018.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761018.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001260;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001260;transcript_name=HG00140_ch_T0001260;gene_name=BCORP1;ID=exon:HG00140_ch_T0001260:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19761643	19773288	1000	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001261;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001261;gene_name=BCORP1;ID=HG00140_ch_T0001261;Name=BCORP1
HG00140_chrY	CAT	exon	19761643	19761807	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001261;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001261;transcript_name=HG00140_ch_T0001261;gene_name=BCORP1;ID=exon:HG00140_ch_T0001261:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19761808	19762102	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001261;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001261;transcript_name=HG00140_ch_T0001261;gene_name=BCORP1;ID=intron:HG00140_ch_T0001261:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19762103	19762217	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001261;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001261;transcript_name=HG00140_ch_T0001261;gene_name=BCORP1;ID=exon:HG00140_ch_T0001261:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19762218	19762308	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001261;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001261;transcript_name=HG00140_ch_T0001261;gene_name=BCORP1;ID=intron:HG00140_ch_T0001261:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19762309	19762362	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001261;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001261;transcript_name=HG00140_ch_T0001261;gene_name=BCORP1;ID=exon:HG00140_ch_T0001261:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19762363	19763482	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001261;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001261;transcript_name=HG00140_ch_T0001261;gene_name=BCORP1;ID=intron:HG00140_ch_T0001261:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19763483	19763542	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001261;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001261;transcript_name=HG00140_ch_T0001261;gene_name=BCORP1;ID=exon:HG00140_ch_T0001261:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19763543	19764276	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001261;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001261;transcript_name=HG00140_ch_T0001261;gene_name=BCORP1;ID=intron:HG00140_ch_T0001261:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764277	19764393	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001261;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001261;transcript_name=HG00140_ch_T0001261;gene_name=BCORP1;ID=exon:HG00140_ch_T0001261:4;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19764866	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001261;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001261;transcript_name=HG00140_ch_T0001261;gene_name=BCORP1;ID=intron:HG00140_ch_T0001261:4;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764867	19764947	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001261;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001261;transcript_name=HG00140_ch_T0001261;gene_name=BCORP1;ID=exon:HG00140_ch_T0001261:5;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764948	19773234	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001261;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001261;transcript_name=HG00140_ch_T0001261;gene_name=BCORP1;ID=intron:HG00140_ch_T0001261:5;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773288	.	-	.	source_transcript=ENST00000761026.1;source_transcript_name=BCORP1-242;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001261;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001261;transcript_name=HG00140_ch_T0001261;gene_name=BCORP1;ID=exon:HG00140_ch_T0001261:6;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19761643	19773497	1000	-	.	source_transcript=ENST00000761005.1;source_transcript_name=BCORP1-221;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761005.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001262;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001262;gene_name=BCORP1;ID=HG00140_ch_T0001262;Name=BCORP1
HG00140_chrY	CAT	exon	19761643	19761807	.	-	.	source_transcript=ENST00000761005.1;source_transcript_name=BCORP1-221;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761005.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001262;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001262;transcript_name=HG00140_ch_T0001262;gene_name=BCORP1;ID=exon:HG00140_ch_T0001262:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19761808	19764292	.	-	.	source_transcript=ENST00000761005.1;source_transcript_name=BCORP1-221;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761005.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001262;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001262;transcript_name=HG00140_ch_T0001262;gene_name=BCORP1;ID=intron:HG00140_ch_T0001262:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764293	19764393	.	-	.	source_transcript=ENST00000761005.1;source_transcript_name=BCORP1-221;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761005.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001262;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001262;transcript_name=HG00140_ch_T0001262;gene_name=BCORP1;ID=exon:HG00140_ch_T0001262:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19764866	.	-	.	source_transcript=ENST00000761005.1;source_transcript_name=BCORP1-221;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761005.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001262;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001262;transcript_name=HG00140_ch_T0001262;gene_name=BCORP1;ID=intron:HG00140_ch_T0001262:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764867	19764947	.	-	.	source_transcript=ENST00000761005.1;source_transcript_name=BCORP1-221;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761005.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001262;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001262;transcript_name=HG00140_ch_T0001262;gene_name=BCORP1;ID=exon:HG00140_ch_T0001262:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764948	19773234	.	-	.	source_transcript=ENST00000761005.1;source_transcript_name=BCORP1-221;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761005.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001262;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001262;transcript_name=HG00140_ch_T0001262;gene_name=BCORP1;ID=intron:HG00140_ch_T0001262:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773497	.	-	.	source_transcript=ENST00000761005.1;source_transcript_name=BCORP1-221;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761005.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761005.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001262;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001262;transcript_name=HG00140_ch_T0001262;gene_name=BCORP1;ID=exon:HG00140_ch_T0001262:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19761643	19773267	1000	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001263;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001263;gene_name=BCORP1;ID=HG00140_ch_T0001263;Name=BCORP1
HG00140_chrY	CAT	exon	19761643	19761807	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001263;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001263;transcript_name=HG00140_ch_T0001263;gene_name=BCORP1;ID=exon:HG00140_ch_T0001263:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19761808	19763482	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001263;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001263;transcript_name=HG00140_ch_T0001263;gene_name=BCORP1;ID=intron:HG00140_ch_T0001263:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19763483	19763542	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001263;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001263;transcript_name=HG00140_ch_T0001263;gene_name=BCORP1;ID=exon:HG00140_ch_T0001263:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19763543	19764292	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001263;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001263;transcript_name=HG00140_ch_T0001263;gene_name=BCORP1;ID=intron:HG00140_ch_T0001263:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764293	19764393	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001263;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001263;transcript_name=HG00140_ch_T0001263;gene_name=BCORP1;ID=exon:HG00140_ch_T0001263:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19764866	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001263;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001263;transcript_name=HG00140_ch_T0001263;gene_name=BCORP1;ID=intron:HG00140_ch_T0001263:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764867	19764922	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001263;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001263;transcript_name=HG00140_ch_T0001263;gene_name=BCORP1;ID=exon:HG00140_ch_T0001263:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764923	19765592	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001263;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001263;transcript_name=HG00140_ch_T0001263;gene_name=BCORP1;ID=intron:HG00140_ch_T0001263:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19765593	19765672	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001263;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001263;transcript_name=HG00140_ch_T0001263;gene_name=BCORP1;ID=exon:HG00140_ch_T0001263:4;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19765673	19773234	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001263;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001263;transcript_name=HG00140_ch_T0001263;gene_name=BCORP1;ID=intron:HG00140_ch_T0001263:4;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773267	.	-	.	source_transcript=ENST00000761033.1;source_transcript_name=BCORP1-249;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761033.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761033.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001263;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001263;transcript_name=HG00140_ch_T0001263;gene_name=BCORP1;ID=exon:HG00140_ch_T0001263:5;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19761643	19773533	1000	-	.	source_transcript=ENST00000760999.1;source_transcript_name=BCORP1-215;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760999.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760999.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001264;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001264;gene_name=BCORP1;ID=HG00140_ch_T0001264;Name=BCORP1
HG00140_chrY	CAT	exon	19761643	19761807	.	-	.	source_transcript=ENST00000760999.1;source_transcript_name=BCORP1-215;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760999.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760999.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001264;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001264;transcript_name=HG00140_ch_T0001264;gene_name=BCORP1;ID=exon:HG00140_ch_T0001264:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19761808	19764276	.	-	.	source_transcript=ENST00000760999.1;source_transcript_name=BCORP1-215;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760999.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760999.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001264;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001264;transcript_name=HG00140_ch_T0001264;gene_name=BCORP1;ID=intron:HG00140_ch_T0001264:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764277	19764393	.	-	.	source_transcript=ENST00000760999.1;source_transcript_name=BCORP1-215;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760999.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760999.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001264;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001264;transcript_name=HG00140_ch_T0001264;gene_name=BCORP1;ID=exon:HG00140_ch_T0001264:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19764866	.	-	.	source_transcript=ENST00000760999.1;source_transcript_name=BCORP1-215;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760999.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760999.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001264;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001264;transcript_name=HG00140_ch_T0001264;gene_name=BCORP1;ID=intron:HG00140_ch_T0001264:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764867	19764947	.	-	.	source_transcript=ENST00000760999.1;source_transcript_name=BCORP1-215;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760999.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760999.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001264;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001264;transcript_name=HG00140_ch_T0001264;gene_name=BCORP1;ID=exon:HG00140_ch_T0001264:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764948	19773234	.	-	.	source_transcript=ENST00000760999.1;source_transcript_name=BCORP1-215;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760999.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760999.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001264;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001264;transcript_name=HG00140_ch_T0001264;gene_name=BCORP1;ID=intron:HG00140_ch_T0001264:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773533	.	-	.	source_transcript=ENST00000760999.1;source_transcript_name=BCORP1-215;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000760999.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000760999.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001264;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001264;transcript_name=HG00140_ch_T0001264;gene_name=BCORP1;ID=exon:HG00140_ch_T0001264:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19761643	19773262	1000	-	.	source_transcript=ENST00000761038.1;source_transcript_name=BCORP1-254;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761038.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001265;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001265;gene_name=BCORP1;ID=HG00140_ch_T0001265;Name=BCORP1
HG00140_chrY	CAT	exon	19761643	19761807	.	-	.	source_transcript=ENST00000761038.1;source_transcript_name=BCORP1-254;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001265;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001265;transcript_name=HG00140_ch_T0001265;gene_name=BCORP1;ID=exon:HG00140_ch_T0001265:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19761808	19762102	.	-	.	source_transcript=ENST00000761038.1;source_transcript_name=BCORP1-254;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001265;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001265;transcript_name=HG00140_ch_T0001265;gene_name=BCORP1;ID=intron:HG00140_ch_T0001265:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19762103	19762217	.	-	.	source_transcript=ENST00000761038.1;source_transcript_name=BCORP1-254;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001265;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001265;transcript_name=HG00140_ch_T0001265;gene_name=BCORP1;ID=exon:HG00140_ch_T0001265:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19762218	19764292	.	-	.	source_transcript=ENST00000761038.1;source_transcript_name=BCORP1-254;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001265;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001265;transcript_name=HG00140_ch_T0001265;gene_name=BCORP1;ID=intron:HG00140_ch_T0001265:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764293	19764393	.	-	.	source_transcript=ENST00000761038.1;source_transcript_name=BCORP1-254;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001265;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001265;transcript_name=HG00140_ch_T0001265;gene_name=BCORP1;ID=exon:HG00140_ch_T0001265:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19765592	.	-	.	source_transcript=ENST00000761038.1;source_transcript_name=BCORP1-254;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001265;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001265;transcript_name=HG00140_ch_T0001265;gene_name=BCORP1;ID=intron:HG00140_ch_T0001265:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19765593	19765672	.	-	.	source_transcript=ENST00000761038.1;source_transcript_name=BCORP1-254;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001265;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001265;transcript_name=HG00140_ch_T0001265;gene_name=BCORP1;ID=exon:HG00140_ch_T0001265:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19765673	19773234	.	-	.	source_transcript=ENST00000761038.1;source_transcript_name=BCORP1-254;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001265;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001265;transcript_name=HG00140_ch_T0001265;gene_name=BCORP1;ID=intron:HG00140_ch_T0001265:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773262	.	-	.	source_transcript=ENST00000761038.1;source_transcript_name=BCORP1-254;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001265;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001265;transcript_name=HG00140_ch_T0001265;gene_name=BCORP1;ID=exon:HG00140_ch_T0001265:4;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19761643	19773495	1000	-	.	source_transcript=ENST00000761006.1;source_transcript_name=BCORP1-222;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761006.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761006.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001266;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001266;gene_name=BCORP1;ID=HG00140_ch_T0001266;Name=BCORP1
HG00140_chrY	CAT	exon	19761643	19761807	.	-	.	source_transcript=ENST00000761006.1;source_transcript_name=BCORP1-222;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761006.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761006.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001266;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001266;transcript_name=HG00140_ch_T0001266;gene_name=BCORP1;ID=exon:HG00140_ch_T0001266:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19761808	19763482	.	-	.	source_transcript=ENST00000761006.1;source_transcript_name=BCORP1-222;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761006.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761006.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001266;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001266;transcript_name=HG00140_ch_T0001266;gene_name=BCORP1;ID=intron:HG00140_ch_T0001266:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19763483	19763542	.	-	.	source_transcript=ENST00000761006.1;source_transcript_name=BCORP1-222;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761006.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761006.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001266;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001266;transcript_name=HG00140_ch_T0001266;gene_name=BCORP1;ID=exon:HG00140_ch_T0001266:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19763543	19764292	.	-	.	source_transcript=ENST00000761006.1;source_transcript_name=BCORP1-222;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761006.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761006.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001266;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001266;transcript_name=HG00140_ch_T0001266;gene_name=BCORP1;ID=intron:HG00140_ch_T0001266:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764293	19764393	.	-	.	source_transcript=ENST00000761006.1;source_transcript_name=BCORP1-222;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761006.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761006.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001266;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001266;transcript_name=HG00140_ch_T0001266;gene_name=BCORP1;ID=exon:HG00140_ch_T0001266:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19764866	.	-	.	source_transcript=ENST00000761006.1;source_transcript_name=BCORP1-222;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761006.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761006.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001266;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001266;transcript_name=HG00140_ch_T0001266;gene_name=BCORP1;ID=intron:HG00140_ch_T0001266:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764867	19764947	.	-	.	source_transcript=ENST00000761006.1;source_transcript_name=BCORP1-222;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761006.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761006.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001266;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001266;transcript_name=HG00140_ch_T0001266;gene_name=BCORP1;ID=exon:HG00140_ch_T0001266:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764948	19773234	.	-	.	source_transcript=ENST00000761006.1;source_transcript_name=BCORP1-222;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761006.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761006.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001266;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001266;transcript_name=HG00140_ch_T0001266;gene_name=BCORP1;ID=intron:HG00140_ch_T0001266:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773495	.	-	.	source_transcript=ENST00000761006.1;source_transcript_name=BCORP1-222;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761006.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761006.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001266;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001266;transcript_name=HG00140_ch_T0001266;gene_name=BCORP1;ID=exon:HG00140_ch_T0001266:4;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19761643	19773312	1000	-	.	source_transcript=ENST00000761013.1;source_transcript_name=BCORP1-229;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761013.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001267;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001267;gene_name=BCORP1;ID=HG00140_ch_T0001267;Name=BCORP1
HG00140_chrY	CAT	exon	19761643	19761807	.	-	.	source_transcript=ENST00000761013.1;source_transcript_name=BCORP1-229;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761013.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001267;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001267;transcript_name=HG00140_ch_T0001267;gene_name=BCORP1;ID=exon:HG00140_ch_T0001267:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19761808	19764292	.	-	.	source_transcript=ENST00000761013.1;source_transcript_name=BCORP1-229;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761013.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001267;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001267;transcript_name=HG00140_ch_T0001267;gene_name=BCORP1;ID=intron:HG00140_ch_T0001267:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764293	19764393	.	-	.	source_transcript=ENST00000761013.1;source_transcript_name=BCORP1-229;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761013.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001267;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001267;transcript_name=HG00140_ch_T0001267;gene_name=BCORP1;ID=exon:HG00140_ch_T0001267:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19773229	.	-	.	source_transcript=ENST00000761013.1;source_transcript_name=BCORP1-229;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761013.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001267;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001267;transcript_name=HG00140_ch_T0001267;gene_name=BCORP1;ID=intron:HG00140_ch_T0001267:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773230	19773312	.	-	.	source_transcript=ENST00000761013.1;source_transcript_name=BCORP1-229;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761013.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761013.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001267;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001267;transcript_name=HG00140_ch_T0001267;gene_name=BCORP1;ID=exon:HG00140_ch_T0001267:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19761643	19773262	1000	-	.	source_transcript=ENST00000761036.1;source_transcript_name=BCORP1-252;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761036.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001268;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001268;gene_name=BCORP1;ID=HG00140_ch_T0001268;Name=BCORP1
HG00140_chrY	CAT	exon	19761643	19761807	.	-	.	source_transcript=ENST00000761036.1;source_transcript_name=BCORP1-252;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001268;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001268;transcript_name=HG00140_ch_T0001268;gene_name=BCORP1;ID=exon:HG00140_ch_T0001268:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19761808	19763482	.	-	.	source_transcript=ENST00000761036.1;source_transcript_name=BCORP1-252;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001268;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001268;transcript_name=HG00140_ch_T0001268;gene_name=BCORP1;ID=intron:HG00140_ch_T0001268:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19763483	19763542	.	-	.	source_transcript=ENST00000761036.1;source_transcript_name=BCORP1-252;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001268;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001268;transcript_name=HG00140_ch_T0001268;gene_name=BCORP1;ID=exon:HG00140_ch_T0001268:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19763543	19764292	.	-	.	source_transcript=ENST00000761036.1;source_transcript_name=BCORP1-252;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001268;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001268;transcript_name=HG00140_ch_T0001268;gene_name=BCORP1;ID=intron:HG00140_ch_T0001268:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764293	19764393	.	-	.	source_transcript=ENST00000761036.1;source_transcript_name=BCORP1-252;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001268;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001268;transcript_name=HG00140_ch_T0001268;gene_name=BCORP1;ID=exon:HG00140_ch_T0001268:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19765592	.	-	.	source_transcript=ENST00000761036.1;source_transcript_name=BCORP1-252;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001268;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001268;transcript_name=HG00140_ch_T0001268;gene_name=BCORP1;ID=intron:HG00140_ch_T0001268:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19765593	19765677	.	-	.	source_transcript=ENST00000761036.1;source_transcript_name=BCORP1-252;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001268;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001268;transcript_name=HG00140_ch_T0001268;gene_name=BCORP1;ID=exon:HG00140_ch_T0001268:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19765678	19773234	.	-	.	source_transcript=ENST00000761036.1;source_transcript_name=BCORP1-252;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001268;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001268;transcript_name=HG00140_ch_T0001268;gene_name=BCORP1;ID=intron:HG00140_ch_T0001268:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773262	.	-	.	source_transcript=ENST00000761036.1;source_transcript_name=BCORP1-252;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001268;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001268;transcript_name=HG00140_ch_T0001268;gene_name=BCORP1;ID=exon:HG00140_ch_T0001268:4;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19761643	19773288	1000	-	.	source_transcript=ENST00000761027.1;source_transcript_name=BCORP1-243;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761027.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001269;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001269;gene_name=BCORP1;ID=HG00140_ch_T0001269;Name=BCORP1
HG00140_chrY	CAT	exon	19761643	19761807	.	-	.	source_transcript=ENST00000761027.1;source_transcript_name=BCORP1-243;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001269;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001269;transcript_name=HG00140_ch_T0001269;gene_name=BCORP1;ID=exon:HG00140_ch_T0001269:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19761808	19762102	.	-	.	source_transcript=ENST00000761027.1;source_transcript_name=BCORP1-243;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001269;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001269;transcript_name=HG00140_ch_T0001269;gene_name=BCORP1;ID=intron:HG00140_ch_T0001269:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19762103	19762221	.	-	.	source_transcript=ENST00000761027.1;source_transcript_name=BCORP1-243;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001269;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001269;transcript_name=HG00140_ch_T0001269;gene_name=BCORP1;ID=exon:HG00140_ch_T0001269:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19762222	19764292	.	-	.	source_transcript=ENST00000761027.1;source_transcript_name=BCORP1-243;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001269;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001269;transcript_name=HG00140_ch_T0001269;gene_name=BCORP1;ID=intron:HG00140_ch_T0001269:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764293	19764393	.	-	.	source_transcript=ENST00000761027.1;source_transcript_name=BCORP1-243;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001269;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001269;transcript_name=HG00140_ch_T0001269;gene_name=BCORP1;ID=exon:HG00140_ch_T0001269:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19773234	.	-	.	source_transcript=ENST00000761027.1;source_transcript_name=BCORP1-243;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001269;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001269;transcript_name=HG00140_ch_T0001269;gene_name=BCORP1;ID=intron:HG00140_ch_T0001269:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773288	.	-	.	source_transcript=ENST00000761027.1;source_transcript_name=BCORP1-243;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001269;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001269;transcript_name=HG00140_ch_T0001269;gene_name=BCORP1;ID=exon:HG00140_ch_T0001269:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19761646	19773297	1000	-	.	source_transcript=ENST00000761020.1;source_transcript_name=BCORP1-236;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761020.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001270;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001270;gene_name=BCORP1;ID=HG00140_ch_T0001270;Name=BCORP1
HG00140_chrY	CAT	exon	19761646	19761807	.	-	.	source_transcript=ENST00000761020.1;source_transcript_name=BCORP1-236;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761020.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001270;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001270;transcript_name=HG00140_ch_T0001270;gene_name=BCORP1;ID=exon:HG00140_ch_T0001270:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19761808	19762263	.	-	.	source_transcript=ENST00000761020.1;source_transcript_name=BCORP1-236;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761020.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001270;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001270;transcript_name=HG00140_ch_T0001270;gene_name=BCORP1;ID=intron:HG00140_ch_T0001270:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19762264	19762362	.	-	.	source_transcript=ENST00000761020.1;source_transcript_name=BCORP1-236;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761020.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001270;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001270;transcript_name=HG00140_ch_T0001270;gene_name=BCORP1;ID=exon:HG00140_ch_T0001270:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19762363	19764276	.	-	.	source_transcript=ENST00000761020.1;source_transcript_name=BCORP1-236;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761020.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001270;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001270;transcript_name=HG00140_ch_T0001270;gene_name=BCORP1;ID=intron:HG00140_ch_T0001270:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764277	19764393	.	-	.	source_transcript=ENST00000761020.1;source_transcript_name=BCORP1-236;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761020.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001270;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001270;transcript_name=HG00140_ch_T0001270;gene_name=BCORP1;ID=exon:HG00140_ch_T0001270:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19773234	.	-	.	source_transcript=ENST00000761020.1;source_transcript_name=BCORP1-236;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761020.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001270;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001270;transcript_name=HG00140_ch_T0001270;gene_name=BCORP1;ID=intron:HG00140_ch_T0001270:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773297	.	-	.	source_transcript=ENST00000761020.1;source_transcript_name=BCORP1-236;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761020.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761020.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001270;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001270;transcript_name=HG00140_ch_T0001270;gene_name=BCORP1;ID=exon:HG00140_ch_T0001270:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19761651	19773260	1000	-	.	source_transcript=ENST00000761045.1;source_transcript_name=BCORP1-261;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761045.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001271;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001271;gene_name=BCORP1;ID=HG00140_ch_T0001271;Name=BCORP1
HG00140_chrY	CAT	exon	19761651	19761807	.	-	.	source_transcript=ENST00000761045.1;source_transcript_name=BCORP1-261;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001271;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001271;transcript_name=HG00140_ch_T0001271;gene_name=BCORP1;ID=exon:HG00140_ch_T0001271:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19761808	19762102	.	-	.	source_transcript=ENST00000761045.1;source_transcript_name=BCORP1-261;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001271;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001271;transcript_name=HG00140_ch_T0001271;gene_name=BCORP1;ID=intron:HG00140_ch_T0001271:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19762103	19762217	.	-	.	source_transcript=ENST00000761045.1;source_transcript_name=BCORP1-261;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001271;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001271;transcript_name=HG00140_ch_T0001271;gene_name=BCORP1;ID=exon:HG00140_ch_T0001271:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19762218	19764276	.	-	.	source_transcript=ENST00000761045.1;source_transcript_name=BCORP1-261;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001271;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001271;transcript_name=HG00140_ch_T0001271;gene_name=BCORP1;ID=intron:HG00140_ch_T0001271:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764277	19764393	.	-	.	source_transcript=ENST00000761045.1;source_transcript_name=BCORP1-261;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001271;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001271;transcript_name=HG00140_ch_T0001271;gene_name=BCORP1;ID=exon:HG00140_ch_T0001271:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19765592	.	-	.	source_transcript=ENST00000761045.1;source_transcript_name=BCORP1-261;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001271;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001271;transcript_name=HG00140_ch_T0001271;gene_name=BCORP1;ID=intron:HG00140_ch_T0001271:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19765593	19765672	.	-	.	source_transcript=ENST00000761045.1;source_transcript_name=BCORP1-261;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001271;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001271;transcript_name=HG00140_ch_T0001271;gene_name=BCORP1;ID=exon:HG00140_ch_T0001271:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19765673	19773234	.	-	.	source_transcript=ENST00000761045.1;source_transcript_name=BCORP1-261;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001271;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001271;transcript_name=HG00140_ch_T0001271;gene_name=BCORP1;ID=intron:HG00140_ch_T0001271:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773260	.	-	.	source_transcript=ENST00000761045.1;source_transcript_name=BCORP1-261;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001271;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001271;transcript_name=HG00140_ch_T0001271;gene_name=BCORP1;ID=exon:HG00140_ch_T0001271:4;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19761651	19773489	1000	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001272;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001272;gene_name=BCORP1;ID=HG00140_ch_T0001272;Name=BCORP1
HG00140_chrY	CAT	exon	19761651	19761807	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001272;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001272;transcript_name=HG00140_ch_T0001272;gene_name=BCORP1;ID=exon:HG00140_ch_T0001272:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19761808	19762102	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001272;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001272;transcript_name=HG00140_ch_T0001272;gene_name=BCORP1;ID=intron:HG00140_ch_T0001272:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19762103	19762217	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001272;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001272;transcript_name=HG00140_ch_T0001272;gene_name=BCORP1;ID=exon:HG00140_ch_T0001272:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19762218	19764292	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001272;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001272;transcript_name=HG00140_ch_T0001272;gene_name=BCORP1;ID=intron:HG00140_ch_T0001272:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764293	19764393	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001272;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001272;transcript_name=HG00140_ch_T0001272;gene_name=BCORP1;ID=exon:HG00140_ch_T0001272:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19764866	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001272;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001272;transcript_name=HG00140_ch_T0001272;gene_name=BCORP1;ID=intron:HG00140_ch_T0001272:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764867	19764922	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001272;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001272;transcript_name=HG00140_ch_T0001272;gene_name=BCORP1;ID=exon:HG00140_ch_T0001272:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764923	19765592	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001272;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001272;transcript_name=HG00140_ch_T0001272;gene_name=BCORP1;ID=intron:HG00140_ch_T0001272:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19765593	19765677	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001272;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001272;transcript_name=HG00140_ch_T0001272;gene_name=BCORP1;ID=exon:HG00140_ch_T0001272:4;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19765678	19773234	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001272;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001272;transcript_name=HG00140_ch_T0001272;gene_name=BCORP1;ID=intron:HG00140_ch_T0001272:4;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773489	.	-	.	source_transcript=ENST00000761007.1;source_transcript_name=BCORP1-223;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761007.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761007.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001272;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001272;transcript_name=HG00140_ch_T0001272;gene_name=BCORP1;ID=exon:HG00140_ch_T0001272:5;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19761651	19773288	1000	-	.	source_transcript=ENST00000761030.1;source_transcript_name=BCORP1-246;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761030.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001273;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001273;gene_name=BCORP1;ID=HG00140_ch_T0001273;Name=BCORP1
HG00140_chrY	CAT	exon	19761651	19761807	.	-	.	source_transcript=ENST00000761030.1;source_transcript_name=BCORP1-246;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001273;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001273;transcript_name=HG00140_ch_T0001273;gene_name=BCORP1;ID=exon:HG00140_ch_T0001273:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19761808	19762102	.	-	.	source_transcript=ENST00000761030.1;source_transcript_name=BCORP1-246;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001273;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001273;transcript_name=HG00140_ch_T0001273;gene_name=BCORP1;ID=intron:HG00140_ch_T0001273:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19762103	19762217	.	-	.	source_transcript=ENST00000761030.1;source_transcript_name=BCORP1-246;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001273;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001273;transcript_name=HG00140_ch_T0001273;gene_name=BCORP1;ID=exon:HG00140_ch_T0001273:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19762218	19763482	.	-	.	source_transcript=ENST00000761030.1;source_transcript_name=BCORP1-246;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001273;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001273;transcript_name=HG00140_ch_T0001273;gene_name=BCORP1;ID=intron:HG00140_ch_T0001273:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19763483	19763542	.	-	.	source_transcript=ENST00000761030.1;source_transcript_name=BCORP1-246;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001273;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001273;transcript_name=HG00140_ch_T0001273;gene_name=BCORP1;ID=exon:HG00140_ch_T0001273:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19763543	19764292	.	-	.	source_transcript=ENST00000761030.1;source_transcript_name=BCORP1-246;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001273;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001273;transcript_name=HG00140_ch_T0001273;gene_name=BCORP1;ID=intron:HG00140_ch_T0001273:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764293	19764393	.	-	.	source_transcript=ENST00000761030.1;source_transcript_name=BCORP1-246;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001273;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001273;transcript_name=HG00140_ch_T0001273;gene_name=BCORP1;ID=exon:HG00140_ch_T0001273:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19773234	.	-	.	source_transcript=ENST00000761030.1;source_transcript_name=BCORP1-246;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001273;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001273;transcript_name=HG00140_ch_T0001273;gene_name=BCORP1;ID=intron:HG00140_ch_T0001273:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773288	.	-	.	source_transcript=ENST00000761030.1;source_transcript_name=BCORP1-246;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001273;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001273;transcript_name=HG00140_ch_T0001273;gene_name=BCORP1;ID=exon:HG00140_ch_T0001273:4;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19761652	19773262	1000	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001274;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001274;gene_name=BCORP1;ID=HG00140_ch_T0001274;Name=BCORP1
HG00140_chrY	CAT	exon	19761652	19761807	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001274;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001274;transcript_name=HG00140_ch_T0001274;gene_name=BCORP1;ID=exon:HG00140_ch_T0001274:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19761808	19762102	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001274;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001274;transcript_name=HG00140_ch_T0001274;gene_name=BCORP1;ID=intron:HG00140_ch_T0001274:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19762103	19762217	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001274;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001274;transcript_name=HG00140_ch_T0001274;gene_name=BCORP1;ID=exon:HG00140_ch_T0001274:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19762218	19764292	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001274;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001274;transcript_name=HG00140_ch_T0001274;gene_name=BCORP1;ID=intron:HG00140_ch_T0001274:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764293	19764393	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001274;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001274;transcript_name=HG00140_ch_T0001274;gene_name=BCORP1;ID=exon:HG00140_ch_T0001274:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19764866	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001274;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001274;transcript_name=HG00140_ch_T0001274;gene_name=BCORP1;ID=intron:HG00140_ch_T0001274:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764867	19764947	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001274;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001274;transcript_name=HG00140_ch_T0001274;gene_name=BCORP1;ID=exon:HG00140_ch_T0001274:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764948	19765592	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001274;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001274;transcript_name=HG00140_ch_T0001274;gene_name=BCORP1;ID=intron:HG00140_ch_T0001274:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19765593	19765672	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001274;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001274;transcript_name=HG00140_ch_T0001274;gene_name=BCORP1;ID=exon:HG00140_ch_T0001274:4;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19765673	19773234	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001274;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001274;transcript_name=HG00140_ch_T0001274;gene_name=BCORP1;ID=intron:HG00140_ch_T0001274:4;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773262	.	-	.	source_transcript=ENST00000761044.1;source_transcript_name=BCORP1-260;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001274;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001274;transcript_name=HG00140_ch_T0001274;gene_name=BCORP1;ID=exon:HG00140_ch_T0001274:5;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19761654	19765672	1000	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001275;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001275;gene_name=BCORP1;ID=HG00140_ch_T0001275;Name=BCORP1
HG00140_chrY	CAT	exon	19761654	19761807	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001275;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001275;transcript_name=HG00140_ch_T0001275;gene_name=BCORP1;ID=exon:HG00140_ch_T0001275:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19761808	19762102	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001275;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001275;transcript_name=HG00140_ch_T0001275;gene_name=BCORP1;ID=intron:HG00140_ch_T0001275:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19762103	19762217	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001275;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001275;transcript_name=HG00140_ch_T0001275;gene_name=BCORP1;ID=exon:HG00140_ch_T0001275:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19762218	19762308	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001275;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001275;transcript_name=HG00140_ch_T0001275;gene_name=BCORP1;ID=intron:HG00140_ch_T0001275:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19762309	19762442	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001275;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001275;transcript_name=HG00140_ch_T0001275;gene_name=BCORP1;ID=exon:HG00140_ch_T0001275:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19762443	19763482	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001275;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001275;transcript_name=HG00140_ch_T0001275;gene_name=BCORP1;ID=intron:HG00140_ch_T0001275:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19763483	19763542	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001275;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001275;transcript_name=HG00140_ch_T0001275;gene_name=BCORP1;ID=exon:HG00140_ch_T0001275:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19763543	19764276	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001275;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001275;transcript_name=HG00140_ch_T0001275;gene_name=BCORP1;ID=intron:HG00140_ch_T0001275:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764277	19764393	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001275;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001275;transcript_name=HG00140_ch_T0001275;gene_name=BCORP1;ID=exon:HG00140_ch_T0001275:4;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19765592	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001275;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001275;transcript_name=HG00140_ch_T0001275;gene_name=BCORP1;ID=intron:HG00140_ch_T0001275:4;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19765593	19765672	.	-	.	source_transcript=ENST00000761048.1;source_transcript_name=BCORP1-264;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761048.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761048.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001275;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001275;transcript_name=HG00140_ch_T0001275;gene_name=BCORP1;ID=exon:HG00140_ch_T0001275:5;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19762603	19773262	1000	-	.	source_transcript=ENST00000761046.1;source_transcript_name=BCORP1-262;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761046.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001276;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001276;gene_name=BCORP1;ID=HG00140_ch_T0001276;Name=BCORP1
HG00140_chrY	CAT	exon	19762603	19763065	.	-	.	source_transcript=ENST00000761046.1;source_transcript_name=BCORP1-262;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001276;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001276;transcript_name=HG00140_ch_T0001276;gene_name=BCORP1;ID=exon:HG00140_ch_T0001276:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19763066	19763482	.	-	.	source_transcript=ENST00000761046.1;source_transcript_name=BCORP1-262;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001276;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001276;transcript_name=HG00140_ch_T0001276;gene_name=BCORP1;ID=intron:HG00140_ch_T0001276:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19763483	19763542	.	-	.	source_transcript=ENST00000761046.1;source_transcript_name=BCORP1-262;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001276;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001276;transcript_name=HG00140_ch_T0001276;gene_name=BCORP1;ID=exon:HG00140_ch_T0001276:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19763543	19764292	.	-	.	source_transcript=ENST00000761046.1;source_transcript_name=BCORP1-262;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001276;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001276;transcript_name=HG00140_ch_T0001276;gene_name=BCORP1;ID=intron:HG00140_ch_T0001276:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764293	19764393	.	-	.	source_transcript=ENST00000761046.1;source_transcript_name=BCORP1-262;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001276;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001276;transcript_name=HG00140_ch_T0001276;gene_name=BCORP1;ID=exon:HG00140_ch_T0001276:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19765592	.	-	.	source_transcript=ENST00000761046.1;source_transcript_name=BCORP1-262;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001276;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001276;transcript_name=HG00140_ch_T0001276;gene_name=BCORP1;ID=intron:HG00140_ch_T0001276:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19765593	19765672	.	-	.	source_transcript=ENST00000761046.1;source_transcript_name=BCORP1-262;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001276;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001276;transcript_name=HG00140_ch_T0001276;gene_name=BCORP1;ID=exon:HG00140_ch_T0001276:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19765673	19773234	.	-	.	source_transcript=ENST00000761046.1;source_transcript_name=BCORP1-262;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001276;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001276;transcript_name=HG00140_ch_T0001276;gene_name=BCORP1;ID=intron:HG00140_ch_T0001276:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773235	19773262	.	-	.	source_transcript=ENST00000761046.1;source_transcript_name=BCORP1-262;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001276;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001276;transcript_name=HG00140_ch_T0001276;gene_name=BCORP1;ID=exon:HG00140_ch_T0001276:4;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19762771	19764922	1000	-	.	source_transcript=ENST00000761049.1;source_transcript_name=BCORP1-265;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761049.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761049.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001277;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001277;gene_name=BCORP1;ID=HG00140_ch_T0001277;Name=BCORP1
HG00140_chrY	CAT	exon	19762771	19763065	.	-	.	source_transcript=ENST00000761049.1;source_transcript_name=BCORP1-265;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761049.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761049.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001277;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001277;transcript_name=HG00140_ch_T0001277;gene_name=BCORP1;ID=exon:HG00140_ch_T0001277:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19763066	19763482	.	-	.	source_transcript=ENST00000761049.1;source_transcript_name=BCORP1-265;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761049.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761049.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001277;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001277;transcript_name=HG00140_ch_T0001277;gene_name=BCORP1;ID=intron:HG00140_ch_T0001277:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19763483	19763542	.	-	.	source_transcript=ENST00000761049.1;source_transcript_name=BCORP1-265;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761049.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761049.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001277;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001277;transcript_name=HG00140_ch_T0001277;gene_name=BCORP1;ID=exon:HG00140_ch_T0001277:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19763543	19764292	.	-	.	source_transcript=ENST00000761049.1;source_transcript_name=BCORP1-265;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761049.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761049.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001277;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001277;transcript_name=HG00140_ch_T0001277;gene_name=BCORP1;ID=intron:HG00140_ch_T0001277:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764293	19764393	.	-	.	source_transcript=ENST00000761049.1;source_transcript_name=BCORP1-265;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761049.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761049.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001277;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001277;transcript_name=HG00140_ch_T0001277;gene_name=BCORP1;ID=exon:HG00140_ch_T0001277:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19764866	.	-	.	source_transcript=ENST00000761049.1;source_transcript_name=BCORP1-265;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761049.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761049.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001277;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001277;transcript_name=HG00140_ch_T0001277;gene_name=BCORP1;ID=intron:HG00140_ch_T0001277:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764867	19764922	.	-	.	source_transcript=ENST00000761049.1;source_transcript_name=BCORP1-265;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761049.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761049.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001277;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001277;transcript_name=HG00140_ch_T0001277;gene_name=BCORP1;ID=exon:HG00140_ch_T0001277:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19762914	19773262	1000	-	.	source_transcript=ENST00000761047.1;source_transcript_name=BCORP1-263;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761047.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761047.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001278;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_G0000408;transcript_name=HG00140_ch_T0001278;gene_name=BCORP1;ID=HG00140_ch_T0001278;Name=BCORP1
HG00140_chrY	CAT	exon	19762914	19763065	.	-	.	source_transcript=ENST00000761047.1;source_transcript_name=BCORP1-263;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761047.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761047.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001278;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001278;transcript_name=HG00140_ch_T0001278;gene_name=BCORP1;ID=exon:HG00140_ch_T0001278:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19763066	19763482	.	-	.	source_transcript=ENST00000761047.1;source_transcript_name=BCORP1-263;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761047.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761047.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001278;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001278;transcript_name=HG00140_ch_T0001278;gene_name=BCORP1;ID=intron:HG00140_ch_T0001278:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19763483	19763542	.	-	.	source_transcript=ENST00000761047.1;source_transcript_name=BCORP1-263;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761047.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761047.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001278;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001278;transcript_name=HG00140_ch_T0001278;gene_name=BCORP1;ID=exon:HG00140_ch_T0001278:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19763543	19764276	.	-	.	source_transcript=ENST00000761047.1;source_transcript_name=BCORP1-263;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761047.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761047.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001278;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001278;transcript_name=HG00140_ch_T0001278;gene_name=BCORP1;ID=intron:HG00140_ch_T0001278:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19764277	19764393	.	-	.	source_transcript=ENST00000761047.1;source_transcript_name=BCORP1-263;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761047.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761047.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001278;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001278;transcript_name=HG00140_ch_T0001278;gene_name=BCORP1;ID=exon:HG00140_ch_T0001278:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19764394	19765592	.	-	.	source_transcript=ENST00000761047.1;source_transcript_name=BCORP1-263;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761047.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761047.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001278;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001278;transcript_name=HG00140_ch_T0001278;gene_name=BCORP1;ID=intron:HG00140_ch_T0001278:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19765593	19765672	.	-	.	source_transcript=ENST00000761047.1;source_transcript_name=BCORP1-263;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761047.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761047.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001278;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001278;transcript_name=HG00140_ch_T0001278;gene_name=BCORP1;ID=exon:HG00140_ch_T0001278:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19765673	19773229	.	-	.	source_transcript=ENST00000761047.1;source_transcript_name=BCORP1-263;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761047.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761047.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001278;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001278;transcript_name=HG00140_ch_T0001278;gene_name=BCORP1;ID=intron:HG00140_ch_T0001278:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19773230	19773262	.	-	.	source_transcript=ENST00000761047.1;source_transcript_name=BCORP1-263;source_gene=ENSG00000291031.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291031.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000761047.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000761047.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001278;gene_id=HG00140_ch_G0000408;Parent=HG00140_ch_T0001278;transcript_name=HG00140_ch_T0001278;gene_name=BCORP1;ID=exon:HG00140_ch_T0001278:4;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	19662837	19691133	.	-	.	source_gene_common_name=BCORP1;source_gene=ENSG00000215580.13;gene_id=HG00140_ch_G0000409;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=BCORP1;gene_sources=liftoff;ID=HG00140_ch_G0000409;Name=BCORP1
HG00140_chrY	CAT	transcript	19662837	19691133	1000	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001216;gene_id=HG00140_ch_G0000409;Parent=HG00140_ch_G0000409;transcript_name=HG00140_ch_T0001216;gene_name=BCORP1;ID=HG00140_ch_T0001216;Name=BCORP1
HG00140_chrY	CAT	exon	19662837	19663116	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001216;gene_id=HG00140_ch_G0000409;Parent=HG00140_ch_T0001216;transcript_name=HG00140_ch_T0001216;gene_name=BCORP1;ID=exon:HG00140_ch_T0001216:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19663117	19665175	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001216;gene_id=HG00140_ch_G0000409;Parent=HG00140_ch_T0001216;transcript_name=HG00140_ch_T0001216;gene_name=BCORP1;ID=intron:HG00140_ch_T0001216:0;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19665176	19665331	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001216;gene_id=HG00140_ch_G0000409;Parent=HG00140_ch_T0001216;transcript_name=HG00140_ch_T0001216;gene_name=BCORP1;ID=exon:HG00140_ch_T0001216:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19665332	19665540	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001216;gene_id=HG00140_ch_G0000409;Parent=HG00140_ch_T0001216;transcript_name=HG00140_ch_T0001216;gene_name=BCORP1;ID=intron:HG00140_ch_T0001216:1;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19665541	19665618	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001216;gene_id=HG00140_ch_G0000409;Parent=HG00140_ch_T0001216;transcript_name=HG00140_ch_T0001216;gene_name=BCORP1;ID=exon:HG00140_ch_T0001216:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19665619	19666210	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001216;gene_id=HG00140_ch_G0000409;Parent=HG00140_ch_T0001216;transcript_name=HG00140_ch_T0001216;gene_name=BCORP1;ID=intron:HG00140_ch_T0001216:2;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19666211	19666356	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001216;gene_id=HG00140_ch_G0000409;Parent=HG00140_ch_T0001216;transcript_name=HG00140_ch_T0001216;gene_name=BCORP1;ID=exon:HG00140_ch_T0001216:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19666357	19672704	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001216;gene_id=HG00140_ch_G0000409;Parent=HG00140_ch_T0001216;transcript_name=HG00140_ch_T0001216;gene_name=BCORP1;ID=intron:HG00140_ch_T0001216:3;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19672705	19672956	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001216;gene_id=HG00140_ch_G0000409;Parent=HG00140_ch_T0001216;transcript_name=HG00140_ch_T0001216;gene_name=BCORP1;ID=exon:HG00140_ch_T0001216:4;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19672957	19673312	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001216;gene_id=HG00140_ch_G0000409;Parent=HG00140_ch_T0001216;transcript_name=HG00140_ch_T0001216;gene_name=BCORP1;ID=intron:HG00140_ch_T0001216:4;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19673313	19673623	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001216;gene_id=HG00140_ch_G0000409;Parent=HG00140_ch_T0001216;transcript_name=HG00140_ch_T0001216;gene_name=BCORP1;ID=exon:HG00140_ch_T0001216:5;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19673624	19680153	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001216;gene_id=HG00140_ch_G0000409;Parent=HG00140_ch_T0001216;transcript_name=HG00140_ch_T0001216;gene_name=BCORP1;ID=intron:HG00140_ch_T0001216:5;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19680154	19680499	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001216;gene_id=HG00140_ch_G0000409;Parent=HG00140_ch_T0001216;transcript_name=HG00140_ch_T0001216;gene_name=BCORP1;ID=exon:HG00140_ch_T0001216:6;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19680500	19680888	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001216;gene_id=HG00140_ch_G0000409;Parent=HG00140_ch_T0001216;transcript_name=HG00140_ch_T0001216;gene_name=BCORP1;ID=intron:HG00140_ch_T0001216:6;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19680889	19681152	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001216;gene_id=HG00140_ch_G0000409;Parent=HG00140_ch_T0001216;transcript_name=HG00140_ch_T0001216;gene_name=BCORP1;ID=exon:HG00140_ch_T0001216:7;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19681153	19686413	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001216;gene_id=HG00140_ch_G0000409;Parent=HG00140_ch_T0001216;transcript_name=HG00140_ch_T0001216;gene_name=BCORP1;ID=intron:HG00140_ch_T0001216:7;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19686414	19686543	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001216;gene_id=HG00140_ch_G0000409;Parent=HG00140_ch_T0001216;transcript_name=HG00140_ch_T0001216;gene_name=BCORP1;ID=exon:HG00140_ch_T0001216:8;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19686544	19686939	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001216;gene_id=HG00140_ch_G0000409;Parent=HG00140_ch_T0001216;transcript_name=HG00140_ch_T0001216;gene_name=BCORP1;ID=intron:HG00140_ch_T0001216:8;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19686940	19686987	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001216;gene_id=HG00140_ch_G0000409;Parent=HG00140_ch_T0001216;transcript_name=HG00140_ch_T0001216;gene_name=BCORP1;ID=exon:HG00140_ch_T0001216:9;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19686988	19687915	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001216;gene_id=HG00140_ch_G0000409;Parent=HG00140_ch_T0001216;transcript_name=HG00140_ch_T0001216;gene_name=BCORP1;ID=intron:HG00140_ch_T0001216:9;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19687916	19691133	.	-	.	source_transcript=ENST00000513194.2;source_transcript_name=BCORP1-201;source_gene=ENSG00000215580.13;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215580.13;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000513194.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000513194.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;transcript_id=HG00140_ch_T0001216;gene_id=HG00140_ch_G0000409;Parent=HG00140_ch_T0001216;transcript_name=HG00140_ch_T0001216;gene_name=BCORP1;ID=exon:HG00140_ch_T0001216:10;Name=BCORP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	19773566	19812527	.	+	.	source_gene_common_name=TXLNGY;source_gene=ENSG00000291033.2;gene_id=HG00140_ch_G0000410;gene_biotype=lncRNA;gene_name=TXLNGY;gene_sources=liftoff;ID=HG00140_ch_G0000410;Name=TXLNGY
HG00140_chrY	CAT	transcript	19773566	19796500	1000	+	.	source_transcript=ENST00000407724.7;source_transcript_name=TXLNGY-203;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000407724.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000407724.7;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001279;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_G0000410;transcript_name=HG00140_ch_T0001279;gene_name=TXLNGY;ID=HG00140_ch_T0001279;Name=TXLNGY
HG00140_chrY	CAT	exon	19773566	19773735	.	+	.	source_transcript=ENST00000407724.7;source_transcript_name=TXLNGY-203;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000407724.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000407724.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001279;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001279;transcript_name=HG00140_ch_T0001279;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001279:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19773736	19793462	.	+	.	source_transcript=ENST00000407724.7;source_transcript_name=TXLNGY-203;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000407724.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000407724.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001279;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001279;transcript_name=HG00140_ch_T0001279;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001279:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19793463	19793760	.	+	.	source_transcript=ENST00000407724.7;source_transcript_name=TXLNGY-203;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000407724.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000407724.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001279;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001279;transcript_name=HG00140_ch_T0001279;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001279:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19793761	19794622	.	+	.	source_transcript=ENST00000407724.7;source_transcript_name=TXLNGY-203;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000407724.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000407724.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001279;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001279;transcript_name=HG00140_ch_T0001279;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001279:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19794623	19794903	.	+	.	source_transcript=ENST00000407724.7;source_transcript_name=TXLNGY-203;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000407724.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000407724.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001279;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001279;transcript_name=HG00140_ch_T0001279;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001279:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19794904	19795779	.	+	.	source_transcript=ENST00000407724.7;source_transcript_name=TXLNGY-203;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000407724.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000407724.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001279;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001279;transcript_name=HG00140_ch_T0001279;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001279:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19795780	19795865	.	+	.	source_transcript=ENST00000407724.7;source_transcript_name=TXLNGY-203;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000407724.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000407724.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001279;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001279;transcript_name=HG00140_ch_T0001279;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001279:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19795866	19796335	.	+	.	source_transcript=ENST00000407724.7;source_transcript_name=TXLNGY-203;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000407724.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000407724.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001279;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001279;transcript_name=HG00140_ch_T0001279;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001279:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19796336	19796500	.	+	.	source_transcript=ENST00000407724.7;source_transcript_name=TXLNGY-203;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000407724.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000407724.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001279;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001279;transcript_name=HG00140_ch_T0001279;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001279:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19773566	19800418	1000	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001280;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_G0000410;transcript_name=HG00140_ch_T0001280;gene_name=TXLNGY;ID=HG00140_ch_T0001280;Name=TXLNGY
HG00140_chrY	CAT	exon	19773566	19773823	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001280;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001280;transcript_name=HG00140_ch_T0001280;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001280:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19773824	19793462	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001280;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001280;transcript_name=HG00140_ch_T0001280;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001280:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19793463	19793760	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001280;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001280;transcript_name=HG00140_ch_T0001280;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001280:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19793761	19794622	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001280;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001280;transcript_name=HG00140_ch_T0001280;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001280:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19794623	19794664	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001280;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001280;transcript_name=HG00140_ch_T0001280;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001280:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19794665	19794795	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001280;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001280;transcript_name=HG00140_ch_T0001280;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001280:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19794796	19794903	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001280;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001280;transcript_name=HG00140_ch_T0001280;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001280:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19794904	19795773	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001280;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001280;transcript_name=HG00140_ch_T0001280;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001280:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19795774	19795865	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001280;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001280;transcript_name=HG00140_ch_T0001280;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001280:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19795866	19798032	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001280;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001280;transcript_name=HG00140_ch_T0001280;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001280:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19798033	19798212	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001280;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001280;transcript_name=HG00140_ch_T0001280;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001280:5;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19798213	19799651	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001280;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001280;transcript_name=HG00140_ch_T0001280;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001280:5;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19799652	19800418	.	+	.	source_transcript=ENST00000588613.6;source_transcript_name=TXLNGY-211;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000588613.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000588613.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001280;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001280;transcript_name=HG00140_ch_T0001280;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001280:6;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19773579	19794412	1000	+	.	source_transcript=ENST00000789742.1;source_transcript_name=TXLNGY-243;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789742.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001281;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_G0000410;transcript_name=HG00140_ch_T0001281;gene_name=TXLNGY;ID=HG00140_ch_T0001281;Name=TXLNGY
HG00140_chrY	CAT	exon	19773579	19773823	.	+	.	source_transcript=ENST00000789742.1;source_transcript_name=TXLNGY-243;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001281;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001281;transcript_name=HG00140_ch_T0001281;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001281:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19773824	19793462	.	+	.	source_transcript=ENST00000789742.1;source_transcript_name=TXLNGY-243;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001281;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001281;transcript_name=HG00140_ch_T0001281;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001281:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19793463	19794412	.	+	.	source_transcript=ENST00000789742.1;source_transcript_name=TXLNGY-243;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789742.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789742.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001281;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001281;transcript_name=HG00140_ch_T0001281;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001281:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19773581	19796100	1000	+	.	source_transcript=ENST00000447202.3;source_transcript_name=TXLNGY-204;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000447202.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000447202.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001282;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_G0000410;transcript_name=HG00140_ch_T0001282;gene_name=TXLNGY;ID=HG00140_ch_T0001282;Name=TXLNGY
HG00140_chrY	CAT	exon	19773581	19774204	.	+	.	source_transcript=ENST00000447202.3;source_transcript_name=TXLNGY-204;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000447202.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000447202.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001282;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001282;transcript_name=HG00140_ch_T0001282;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001282:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19774205	19793462	.	+	.	source_transcript=ENST00000447202.3;source_transcript_name=TXLNGY-204;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000447202.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000447202.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001282;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001282;transcript_name=HG00140_ch_T0001282;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001282:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19793463	19796100	.	+	.	source_transcript=ENST00000447202.3;source_transcript_name=TXLNGY-204;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000447202.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000447202.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001282;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001282;transcript_name=HG00140_ch_T0001282;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001282:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19773581	19774824	1000	+	.	source_transcript=ENST00000688167.3;source_transcript_name=TXLNGY-217;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000688167.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000688167.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001283;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_G0000410;transcript_name=HG00140_ch_T0001283;gene_name=TXLNGY;ID=HG00140_ch_T0001283;Name=TXLNGY
HG00140_chrY	CAT	exon	19773581	19774824	.	+	.	source_transcript=ENST00000688167.3;source_transcript_name=TXLNGY-217;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000688167.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000688167.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001283;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001283;transcript_name=HG00140_ch_T0001283;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001283:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19773582	19796676	1000	+	.	source_transcript=ENST00000686905.2;source_transcript_name=TXLNGY-216;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686905.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686905.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001284;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_G0000410;transcript_name=HG00140_ch_T0001284;gene_name=TXLNGY;ID=HG00140_ch_T0001284;Name=TXLNGY
HG00140_chrY	CAT	exon	19773582	19773735	.	+	.	source_transcript=ENST00000686905.2;source_transcript_name=TXLNGY-216;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686905.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686905.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001284;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001284;transcript_name=HG00140_ch_T0001284;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001284:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19773736	19793462	.	+	.	source_transcript=ENST00000686905.2;source_transcript_name=TXLNGY-216;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686905.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686905.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001284;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001284;transcript_name=HG00140_ch_T0001284;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001284:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19793463	19793760	.	+	.	source_transcript=ENST00000686905.2;source_transcript_name=TXLNGY-216;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686905.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686905.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001284;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001284;transcript_name=HG00140_ch_T0001284;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001284:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19793761	19794622	.	+	.	source_transcript=ENST00000686905.2;source_transcript_name=TXLNGY-216;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686905.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686905.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001284;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001284;transcript_name=HG00140_ch_T0001284;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001284:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19794623	19796676	.	+	.	source_transcript=ENST00000686905.2;source_transcript_name=TXLNGY-216;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686905.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686905.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001284;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001284;transcript_name=HG00140_ch_T0001284;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001284:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19773582	19796676	1000	+	.	source_transcript=ENST00000459719.8;source_transcript_name=TXLNGY-206;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000459719.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000459719.8;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001285;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_G0000410;transcript_name=HG00140_ch_T0001285;gene_name=TXLNGY;ID=HG00140_ch_T0001285;Name=TXLNGY
HG00140_chrY	CAT	exon	19773582	19773823	.	+	.	source_transcript=ENST00000459719.8;source_transcript_name=TXLNGY-206;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000459719.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000459719.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001285;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001285;transcript_name=HG00140_ch_T0001285;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001285:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19773824	19793462	.	+	.	source_transcript=ENST00000459719.8;source_transcript_name=TXLNGY-206;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000459719.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000459719.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001285;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001285;transcript_name=HG00140_ch_T0001285;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001285:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19793463	19793760	.	+	.	source_transcript=ENST00000459719.8;source_transcript_name=TXLNGY-206;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000459719.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000459719.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001285;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001285;transcript_name=HG00140_ch_T0001285;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001285:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19793761	19794622	.	+	.	source_transcript=ENST00000459719.8;source_transcript_name=TXLNGY-206;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000459719.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000459719.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001285;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001285;transcript_name=HG00140_ch_T0001285;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001285:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19794623	19795865	.	+	.	source_transcript=ENST00000459719.8;source_transcript_name=TXLNGY-206;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000459719.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000459719.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001285;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001285;transcript_name=HG00140_ch_T0001285;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001285:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19795866	19796335	.	+	.	source_transcript=ENST00000459719.8;source_transcript_name=TXLNGY-206;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000459719.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000459719.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001285;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001285;transcript_name=HG00140_ch_T0001285;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001285:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19796336	19796676	.	+	.	source_transcript=ENST00000459719.8;source_transcript_name=TXLNGY-206;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000459719.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000459719.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001285;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001285;transcript_name=HG00140_ch_T0001285;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001285:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19773582	19794411	1000	+	.	source_transcript=ENST00000789743.1;source_transcript_name=TXLNGY-244;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789743.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789743.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001286;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_G0000410;transcript_name=HG00140_ch_T0001286;gene_name=TXLNGY;ID=HG00140_ch_T0001286;Name=TXLNGY
HG00140_chrY	CAT	exon	19773582	19773735	.	+	.	source_transcript=ENST00000789743.1;source_transcript_name=TXLNGY-244;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789743.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789743.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001286;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001286;transcript_name=HG00140_ch_T0001286;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001286:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19773736	19793462	.	+	.	source_transcript=ENST00000789743.1;source_transcript_name=TXLNGY-244;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789743.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789743.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001286;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001286;transcript_name=HG00140_ch_T0001286;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001286:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19793463	19794411	.	+	.	source_transcript=ENST00000789743.1;source_transcript_name=TXLNGY-244;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789743.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789743.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001286;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001286;transcript_name=HG00140_ch_T0001286;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001286:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19773584	19796672	1000	+	.	source_transcript=ENST00000693214.2;source_transcript_name=TXLNGY-218;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693214.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000693214.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001287;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_G0000410;transcript_name=HG00140_ch_T0001287;gene_name=TXLNGY;ID=HG00140_ch_T0001287;Name=TXLNGY
HG00140_chrY	CAT	exon	19773584	19773823	.	+	.	source_transcript=ENST00000693214.2;source_transcript_name=TXLNGY-218;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693214.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000693214.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001287;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001287;transcript_name=HG00140_ch_T0001287;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001287:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19773824	19793462	.	+	.	source_transcript=ENST00000693214.2;source_transcript_name=TXLNGY-218;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693214.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000693214.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001287;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001287;transcript_name=HG00140_ch_T0001287;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001287:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19793463	19793760	.	+	.	source_transcript=ENST00000693214.2;source_transcript_name=TXLNGY-218;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693214.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000693214.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001287;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001287;transcript_name=HG00140_ch_T0001287;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001287:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19793761	19794622	.	+	.	source_transcript=ENST00000693214.2;source_transcript_name=TXLNGY-218;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693214.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000693214.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001287;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001287;transcript_name=HG00140_ch_T0001287;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001287:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19794623	19796672	.	+	.	source_transcript=ENST00000693214.2;source_transcript_name=TXLNGY-218;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000693214.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000693214.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001287;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001287;transcript_name=HG00140_ch_T0001287;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001287:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19773584	19800418	1000	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001288;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_G0000410;transcript_name=HG00140_ch_T0001288;gene_name=TXLNGY;ID=HG00140_ch_T0001288;Name=TXLNGY
HG00140_chrY	CAT	exon	19773584	19773823	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001288;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001288;transcript_name=HG00140_ch_T0001288;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001288:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19773824	19793462	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001288;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001288;transcript_name=HG00140_ch_T0001288;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001288:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19793463	19793760	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001288;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001288;transcript_name=HG00140_ch_T0001288;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001288:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19793761	19794622	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001288;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001288;transcript_name=HG00140_ch_T0001288;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001288:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19794623	19794664	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001288;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001288;transcript_name=HG00140_ch_T0001288;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001288:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19794665	19795773	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001288;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001288;transcript_name=HG00140_ch_T0001288;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001288:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19795774	19795865	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001288;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001288;transcript_name=HG00140_ch_T0001288;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001288:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19795866	19798032	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001288;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001288;transcript_name=HG00140_ch_T0001288;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001288:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19798033	19798212	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001288;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001288;transcript_name=HG00140_ch_T0001288;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001288:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19798213	19799651	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001288;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001288;transcript_name=HG00140_ch_T0001288;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001288:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19799652	19800418	.	+	.	source_transcript=ENST00000789719.1;source_transcript_name=TXLNGY-220;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789719.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789719.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001288;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001288;transcript_name=HG00140_ch_T0001288;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001288:5;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19773587	19796102	1000	+	.	source_transcript=ENST00000789739.1;source_transcript_name=TXLNGY-240;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789739.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001289;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_G0000410;transcript_name=HG00140_ch_T0001289;gene_name=TXLNGY;ID=HG00140_ch_T0001289;Name=TXLNGY
HG00140_chrY	CAT	exon	19773587	19773823	.	+	.	source_transcript=ENST00000789739.1;source_transcript_name=TXLNGY-240;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789739.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001289;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001289;transcript_name=HG00140_ch_T0001289;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001289:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19773824	19775637	.	+	.	source_transcript=ENST00000789739.1;source_transcript_name=TXLNGY-240;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789739.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001289;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001289;transcript_name=HG00140_ch_T0001289;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001289:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19775638	19775712	.	+	.	source_transcript=ENST00000789739.1;source_transcript_name=TXLNGY-240;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789739.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001289;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001289;transcript_name=HG00140_ch_T0001289;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001289:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19775713	19793462	.	+	.	source_transcript=ENST00000789739.1;source_transcript_name=TXLNGY-240;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789739.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001289;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001289;transcript_name=HG00140_ch_T0001289;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001289:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19793463	19793760	.	+	.	source_transcript=ENST00000789739.1;source_transcript_name=TXLNGY-240;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789739.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001289;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001289;transcript_name=HG00140_ch_T0001289;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001289:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19793761	19794622	.	+	.	source_transcript=ENST00000789739.1;source_transcript_name=TXLNGY-240;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789739.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001289;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001289;transcript_name=HG00140_ch_T0001289;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001289:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19794623	19796102	.	+	.	source_transcript=ENST00000789739.1;source_transcript_name=TXLNGY-240;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789739.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789739.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001289;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001289;transcript_name=HG00140_ch_T0001289;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001289:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19773595	19800414	1000	+	.	source_transcript=ENST00000789720.1;source_transcript_name=TXLNGY-221;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789720.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001290;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_G0000410;transcript_name=HG00140_ch_T0001290;gene_name=TXLNGY;ID=HG00140_ch_T0001290;Name=TXLNGY
HG00140_chrY	CAT	exon	19773595	19773823	.	+	.	source_transcript=ENST00000789720.1;source_transcript_name=TXLNGY-221;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001290;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001290;transcript_name=HG00140_ch_T0001290;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001290:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19773824	19793462	.	+	.	source_transcript=ENST00000789720.1;source_transcript_name=TXLNGY-221;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001290;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001290;transcript_name=HG00140_ch_T0001290;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001290:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19793463	19793760	.	+	.	source_transcript=ENST00000789720.1;source_transcript_name=TXLNGY-221;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001290;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001290;transcript_name=HG00140_ch_T0001290;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001290:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19793761	19795773	.	+	.	source_transcript=ENST00000789720.1;source_transcript_name=TXLNGY-221;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001290;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001290;transcript_name=HG00140_ch_T0001290;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001290:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19795774	19795865	.	+	.	source_transcript=ENST00000789720.1;source_transcript_name=TXLNGY-221;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001290;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001290;transcript_name=HG00140_ch_T0001290;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001290:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19795866	19799651	.	+	.	source_transcript=ENST00000789720.1;source_transcript_name=TXLNGY-221;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001290;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001290;transcript_name=HG00140_ch_T0001290;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001290:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19799652	19800414	.	+	.	source_transcript=ENST00000789720.1;source_transcript_name=TXLNGY-221;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789720.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001290;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001290;transcript_name=HG00140_ch_T0001290;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001290:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19773600	19796676	1000	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001291;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_G0000410;transcript_name=HG00140_ch_T0001291;gene_name=TXLNGY;ID=HG00140_ch_T0001291;Name=TXLNGY
HG00140_chrY	CAT	exon	19773600	19773823	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001291;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001291;transcript_name=HG00140_ch_T0001291;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001291:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19773824	19793462	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001291;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001291;transcript_name=HG00140_ch_T0001291;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001291:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19793463	19793760	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001291;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001291;transcript_name=HG00140_ch_T0001291;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001291:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19793761	19794622	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001291;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001291;transcript_name=HG00140_ch_T0001291;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001291:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19794623	19794664	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001291;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001291;transcript_name=HG00140_ch_T0001291;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001291:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19794665	19794795	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001291;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001291;transcript_name=HG00140_ch_T0001291;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001291:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19794796	19794903	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001291;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001291;transcript_name=HG00140_ch_T0001291;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001291:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19794904	19795773	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001291;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001291;transcript_name=HG00140_ch_T0001291;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001291:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19795774	19795865	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001291;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001291;transcript_name=HG00140_ch_T0001291;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001291:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19795866	19796335	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001291;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001291;transcript_name=HG00140_ch_T0001291;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001291:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19796336	19796676	.	+	.	source_transcript=ENST00000589075.6;source_transcript_name=TXLNGY-212;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000589075.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000589075.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001291;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001291;transcript_name=HG00140_ch_T0001291;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001291:5;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19773603	19800414	1000	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001292;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_G0000410;transcript_name=HG00140_ch_T0001292;gene_name=TXLNGY;ID=HG00140_ch_T0001292;Name=TXLNGY
HG00140_chrY	CAT	exon	19773603	19773735	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001292;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001292;transcript_name=HG00140_ch_T0001292;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001292:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19773736	19793462	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001292;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001292;transcript_name=HG00140_ch_T0001292;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001292:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19793463	19793760	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001292;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001292;transcript_name=HG00140_ch_T0001292;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001292:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19793761	19794795	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001292;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001292;transcript_name=HG00140_ch_T0001292;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001292:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19794796	19794903	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001292;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001292;transcript_name=HG00140_ch_T0001292;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001292:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19794904	19795773	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001292;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001292;transcript_name=HG00140_ch_T0001292;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001292:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19795774	19795865	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001292;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001292;transcript_name=HG00140_ch_T0001292;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001292:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19795866	19798032	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001292;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001292;transcript_name=HG00140_ch_T0001292;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001292:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19798033	19798212	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001292;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001292;transcript_name=HG00140_ch_T0001292;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001292:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19798213	19799651	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001292;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001292;transcript_name=HG00140_ch_T0001292;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001292:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19799652	19800414	.	+	.	source_transcript=ENST00000789721.1;source_transcript_name=TXLNGY-222;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789721.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001292;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001292;transcript_name=HG00140_ch_T0001292;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001292:5;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19773603	19796529	1000	+	.	source_transcript=ENST00000789734.1;source_transcript_name=TXLNGY-235;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789734.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001293;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_G0000410;transcript_name=HG00140_ch_T0001293;gene_name=TXLNGY;ID=HG00140_ch_T0001293;Name=TXLNGY
HG00140_chrY	CAT	exon	19773603	19773823	.	+	.	source_transcript=ENST00000789734.1;source_transcript_name=TXLNGY-235;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001293;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001293;transcript_name=HG00140_ch_T0001293;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001293:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19773824	19775126	.	+	.	source_transcript=ENST00000789734.1;source_transcript_name=TXLNGY-235;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001293;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001293;transcript_name=HG00140_ch_T0001293;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001293:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19775127	19775172	.	+	.	source_transcript=ENST00000789734.1;source_transcript_name=TXLNGY-235;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001293;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001293;transcript_name=HG00140_ch_T0001293;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001293:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19775173	19793462	.	+	.	source_transcript=ENST00000789734.1;source_transcript_name=TXLNGY-235;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001293;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001293;transcript_name=HG00140_ch_T0001293;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001293:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19793463	19793760	.	+	.	source_transcript=ENST00000789734.1;source_transcript_name=TXLNGY-235;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001293;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001293;transcript_name=HG00140_ch_T0001293;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001293:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19793761	19795773	.	+	.	source_transcript=ENST00000789734.1;source_transcript_name=TXLNGY-235;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001293;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001293;transcript_name=HG00140_ch_T0001293;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001293:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19795774	19795865	.	+	.	source_transcript=ENST00000789734.1;source_transcript_name=TXLNGY-235;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001293;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001293;transcript_name=HG00140_ch_T0001293;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001293:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19795866	19796335	.	+	.	source_transcript=ENST00000789734.1;source_transcript_name=TXLNGY-235;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001293;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001293;transcript_name=HG00140_ch_T0001293;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001293:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19796336	19796529	.	+	.	source_transcript=ENST00000789734.1;source_transcript_name=TXLNGY-235;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789734.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001293;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001293;transcript_name=HG00140_ch_T0001293;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001293:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19773603	19796676	1000	+	.	source_transcript=ENST00000686158.2;source_transcript_name=TXLNGY-215;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686158.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686158.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001294;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_G0000410;transcript_name=HG00140_ch_T0001294;gene_name=TXLNGY;ID=HG00140_ch_T0001294;Name=TXLNGY
HG00140_chrY	CAT	exon	19773603	19773823	.	+	.	source_transcript=ENST00000686158.2;source_transcript_name=TXLNGY-215;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686158.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686158.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001294;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001294;transcript_name=HG00140_ch_T0001294;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001294:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19773824	19793462	.	+	.	source_transcript=ENST00000686158.2;source_transcript_name=TXLNGY-215;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686158.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686158.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001294;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001294;transcript_name=HG00140_ch_T0001294;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001294:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19793463	19793760	.	+	.	source_transcript=ENST00000686158.2;source_transcript_name=TXLNGY-215;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686158.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686158.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001294;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001294;transcript_name=HG00140_ch_T0001294;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001294:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19793761	19795773	.	+	.	source_transcript=ENST00000686158.2;source_transcript_name=TXLNGY-215;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686158.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686158.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001294;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001294;transcript_name=HG00140_ch_T0001294;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001294:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19795774	19795865	.	+	.	source_transcript=ENST00000686158.2;source_transcript_name=TXLNGY-215;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686158.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686158.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001294;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001294;transcript_name=HG00140_ch_T0001294;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001294:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19795866	19796335	.	+	.	source_transcript=ENST00000686158.2;source_transcript_name=TXLNGY-215;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686158.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686158.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001294;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001294;transcript_name=HG00140_ch_T0001294;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001294:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19796336	19796676	.	+	.	source_transcript=ENST00000686158.2;source_transcript_name=TXLNGY-215;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000686158.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000686158.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001294;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001294;transcript_name=HG00140_ch_T0001294;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001294:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19773603	19796676	1000	+	.	source_transcript=ENST00000789728.1;source_transcript_name=TXLNGY-229;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789728.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001295;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_G0000410;transcript_name=HG00140_ch_T0001295;gene_name=TXLNGY;ID=HG00140_ch_T0001295;Name=TXLNGY
HG00140_chrY	CAT	exon	19773603	19773823	.	+	.	source_transcript=ENST00000789728.1;source_transcript_name=TXLNGY-229;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001295;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001295;transcript_name=HG00140_ch_T0001295;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001295:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19773824	19793462	.	+	.	source_transcript=ENST00000789728.1;source_transcript_name=TXLNGY-229;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001295;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001295;transcript_name=HG00140_ch_T0001295;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001295:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19793463	19793760	.	+	.	source_transcript=ENST00000789728.1;source_transcript_name=TXLNGY-229;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001295;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001295;transcript_name=HG00140_ch_T0001295;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001295:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19793761	19794795	.	+	.	source_transcript=ENST00000789728.1;source_transcript_name=TXLNGY-229;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001295;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001295;transcript_name=HG00140_ch_T0001295;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001295:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19794796	19794903	.	+	.	source_transcript=ENST00000789728.1;source_transcript_name=TXLNGY-229;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001295;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001295;transcript_name=HG00140_ch_T0001295;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001295:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19794904	19795773	.	+	.	source_transcript=ENST00000789728.1;source_transcript_name=TXLNGY-229;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001295;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001295;transcript_name=HG00140_ch_T0001295;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001295:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19795774	19795865	.	+	.	source_transcript=ENST00000789728.1;source_transcript_name=TXLNGY-229;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001295;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001295;transcript_name=HG00140_ch_T0001295;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001295:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19795866	19796335	.	+	.	source_transcript=ENST00000789728.1;source_transcript_name=TXLNGY-229;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001295;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001295;transcript_name=HG00140_ch_T0001295;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001295:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19796336	19796676	.	+	.	source_transcript=ENST00000789728.1;source_transcript_name=TXLNGY-229;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789728.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789728.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001295;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001295;transcript_name=HG00140_ch_T0001295;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001295:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19773603	19796676	1000	+	.	source_transcript=ENST00000447520.6;source_transcript_name=TXLNGY-205;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447520.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000447520.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001296;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_G0000410;transcript_name=HG00140_ch_T0001296;gene_name=TXLNGY;ID=HG00140_ch_T0001296;Name=TXLNGY
HG00140_chrY	CAT	exon	19773603	19773735	.	+	.	source_transcript=ENST00000447520.6;source_transcript_name=TXLNGY-205;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447520.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000447520.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001296;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001296;transcript_name=HG00140_ch_T0001296;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001296:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19773736	19793462	.	+	.	source_transcript=ENST00000447520.6;source_transcript_name=TXLNGY-205;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447520.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000447520.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001296;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001296;transcript_name=HG00140_ch_T0001296;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001296:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19793463	19793760	.	+	.	source_transcript=ENST00000447520.6;source_transcript_name=TXLNGY-205;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447520.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000447520.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001296;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001296;transcript_name=HG00140_ch_T0001296;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001296:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19793761	19795773	.	+	.	source_transcript=ENST00000447520.6;source_transcript_name=TXLNGY-205;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447520.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000447520.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001296;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001296;transcript_name=HG00140_ch_T0001296;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001296:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19795774	19795865	.	+	.	source_transcript=ENST00000447520.6;source_transcript_name=TXLNGY-205;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447520.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000447520.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001296;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001296;transcript_name=HG00140_ch_T0001296;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001296:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19795866	19796335	.	+	.	source_transcript=ENST00000447520.6;source_transcript_name=TXLNGY-205;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447520.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000447520.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001296;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001296;transcript_name=HG00140_ch_T0001296;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001296:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19796336	19796676	.	+	.	source_transcript=ENST00000447520.6;source_transcript_name=TXLNGY-205;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000447520.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000447520.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001296;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001296;transcript_name=HG00140_ch_T0001296;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001296:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19773603	19800411	1000	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001297;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_G0000410;transcript_name=HG00140_ch_T0001297;gene_name=TXLNGY;ID=HG00140_ch_T0001297;Name=TXLNGY
HG00140_chrY	CAT	exon	19773603	19773735	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001297;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001297;transcript_name=HG00140_ch_T0001297;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001297:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19773736	19793462	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001297;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001297;transcript_name=HG00140_ch_T0001297;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001297:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19793463	19793760	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001297;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001297;transcript_name=HG00140_ch_T0001297;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001297:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19793761	19794622	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001297;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001297;transcript_name=HG00140_ch_T0001297;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001297:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19794623	19794664	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001297;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001297;transcript_name=HG00140_ch_T0001297;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001297:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19794665	19794795	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001297;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001297;transcript_name=HG00140_ch_T0001297;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001297:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19794796	19794903	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001297;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001297;transcript_name=HG00140_ch_T0001297;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001297:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19794904	19795773	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001297;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001297;transcript_name=HG00140_ch_T0001297;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001297:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19795774	19795865	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001297;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001297;transcript_name=HG00140_ch_T0001297;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001297:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19795866	19798032	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001297;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001297;transcript_name=HG00140_ch_T0001297;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001297:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19798033	19798212	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001297;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001297;transcript_name=HG00140_ch_T0001297;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001297:5;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19798213	19799651	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001297;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001297;transcript_name=HG00140_ch_T0001297;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001297:5;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19799652	19800411	.	+	.	source_transcript=ENST00000789722.1;source_transcript_name=TXLNGY-223;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789722.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001297;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001297;transcript_name=HG00140_ch_T0001297;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001297:6;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19773603	19800414	1000	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001298;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_G0000410;transcript_name=HG00140_ch_T0001298;gene_name=TXLNGY;ID=HG00140_ch_T0001298;Name=TXLNGY
HG00140_chrY	CAT	exon	19773603	19773735	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001298;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001298;transcript_name=HG00140_ch_T0001298;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001298:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19773736	19793462	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001298;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001298;transcript_name=HG00140_ch_T0001298;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001298:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19793463	19793760	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001298;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001298;transcript_name=HG00140_ch_T0001298;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001298:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19793761	19794622	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001298;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001298;transcript_name=HG00140_ch_T0001298;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001298:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19794623	19794664	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001298;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001298;transcript_name=HG00140_ch_T0001298;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001298:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19794665	19794795	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001298;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001298;transcript_name=HG00140_ch_T0001298;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001298:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19794796	19794903	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001298;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001298;transcript_name=HG00140_ch_T0001298;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001298:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19794904	19795773	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001298;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001298;transcript_name=HG00140_ch_T0001298;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001298:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19795774	19795865	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001298;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001298;transcript_name=HG00140_ch_T0001298;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001298:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19795866	19796862	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001298;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001298;transcript_name=HG00140_ch_T0001298;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001298:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19796863	19797025	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001298;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001298;transcript_name=HG00140_ch_T0001298;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001298:5;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19797026	19798032	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001298;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001298;transcript_name=HG00140_ch_T0001298;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001298:5;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19798033	19798212	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001298;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001298;transcript_name=HG00140_ch_T0001298;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001298:6;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19798213	19799651	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001298;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001298;transcript_name=HG00140_ch_T0001298;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001298:6;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19799652	19800414	.	+	.	source_transcript=ENST00000488280.2;source_transcript_name=TXLNGY-207;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000488280.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000488280.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001298;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001298;transcript_name=HG00140_ch_T0001298;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001298:7;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19773605	19796676	1000	+	.	source_transcript=ENST00000789729.1;source_transcript_name=TXLNGY-230;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789729.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001299;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_G0000410;transcript_name=HG00140_ch_T0001299;gene_name=TXLNGY;ID=HG00140_ch_T0001299;Name=TXLNGY
HG00140_chrY	CAT	exon	19773605	19773823	.	+	.	source_transcript=ENST00000789729.1;source_transcript_name=TXLNGY-230;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001299;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001299;transcript_name=HG00140_ch_T0001299;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001299:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19773824	19793462	.	+	.	source_transcript=ENST00000789729.1;source_transcript_name=TXLNGY-230;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001299;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001299;transcript_name=HG00140_ch_T0001299;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001299:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19793463	19793760	.	+	.	source_transcript=ENST00000789729.1;source_transcript_name=TXLNGY-230;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001299;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001299;transcript_name=HG00140_ch_T0001299;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001299:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19793761	19796335	.	+	.	source_transcript=ENST00000789729.1;source_transcript_name=TXLNGY-230;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001299;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001299;transcript_name=HG00140_ch_T0001299;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001299:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19796336	19796676	.	+	.	source_transcript=ENST00000789729.1;source_transcript_name=TXLNGY-230;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001299;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001299;transcript_name=HG00140_ch_T0001299;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001299:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19773605	19796672	1000	+	.	source_transcript=ENST00000789730.1;source_transcript_name=TXLNGY-231;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789730.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001300;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_G0000410;transcript_name=HG00140_ch_T0001300;gene_name=TXLNGY;ID=HG00140_ch_T0001300;Name=TXLNGY
HG00140_chrY	CAT	exon	19773605	19773823	.	+	.	source_transcript=ENST00000789730.1;source_transcript_name=TXLNGY-231;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001300;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001300;transcript_name=HG00140_ch_T0001300;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001300:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19773824	19793473	.	+	.	source_transcript=ENST00000789730.1;source_transcript_name=TXLNGY-231;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001300;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001300;transcript_name=HG00140_ch_T0001300;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001300:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19793474	19793760	.	+	.	source_transcript=ENST00000789730.1;source_transcript_name=TXLNGY-231;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001300;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001300;transcript_name=HG00140_ch_T0001300;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001300:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19793761	19794795	.	+	.	source_transcript=ENST00000789730.1;source_transcript_name=TXLNGY-231;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001300;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001300;transcript_name=HG00140_ch_T0001300;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001300:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19794796	19794903	.	+	.	source_transcript=ENST00000789730.1;source_transcript_name=TXLNGY-231;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001300;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001300;transcript_name=HG00140_ch_T0001300;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001300:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19794904	19795773	.	+	.	source_transcript=ENST00000789730.1;source_transcript_name=TXLNGY-231;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001300;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001300;transcript_name=HG00140_ch_T0001300;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001300:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19795774	19795865	.	+	.	source_transcript=ENST00000789730.1;source_transcript_name=TXLNGY-231;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001300;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001300;transcript_name=HG00140_ch_T0001300;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001300:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19795866	19796335	.	+	.	source_transcript=ENST00000789730.1;source_transcript_name=TXLNGY-231;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001300;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001300;transcript_name=HG00140_ch_T0001300;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001300:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19796336	19796672	.	+	.	source_transcript=ENST00000789730.1;source_transcript_name=TXLNGY-231;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789730.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789730.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001300;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001300;transcript_name=HG00140_ch_T0001300;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001300:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19773608	19800414	1000	+	.	source_transcript=ENST00000789723.1;source_transcript_name=TXLNGY-224;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789723.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001301;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_G0000410;transcript_name=HG00140_ch_T0001301;gene_name=TXLNGY;ID=HG00140_ch_T0001301;Name=TXLNGY
HG00140_chrY	CAT	exon	19773608	19773735	.	+	.	source_transcript=ENST00000789723.1;source_transcript_name=TXLNGY-224;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001301;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001301;transcript_name=HG00140_ch_T0001301;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001301:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19773736	19793462	.	+	.	source_transcript=ENST00000789723.1;source_transcript_name=TXLNGY-224;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001301;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001301;transcript_name=HG00140_ch_T0001301;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001301:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19793463	19793645	.	+	.	source_transcript=ENST00000789723.1;source_transcript_name=TXLNGY-224;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001301;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001301;transcript_name=HG00140_ch_T0001301;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001301:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19793646	19795773	.	+	.	source_transcript=ENST00000789723.1;source_transcript_name=TXLNGY-224;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001301;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001301;transcript_name=HG00140_ch_T0001301;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001301:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19795774	19795865	.	+	.	source_transcript=ENST00000789723.1;source_transcript_name=TXLNGY-224;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001301;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001301;transcript_name=HG00140_ch_T0001301;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001301:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19795866	19798032	.	+	.	source_transcript=ENST00000789723.1;source_transcript_name=TXLNGY-224;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001301;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001301;transcript_name=HG00140_ch_T0001301;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001301:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19798033	19798212	.	+	.	source_transcript=ENST00000789723.1;source_transcript_name=TXLNGY-224;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001301;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001301;transcript_name=HG00140_ch_T0001301;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001301:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19798213	19799651	.	+	.	source_transcript=ENST00000789723.1;source_transcript_name=TXLNGY-224;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001301;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001301;transcript_name=HG00140_ch_T0001301;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001301:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19799652	19800414	.	+	.	source_transcript=ENST00000789723.1;source_transcript_name=TXLNGY-224;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789723.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001301;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001301;transcript_name=HG00140_ch_T0001301;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001301:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19773609	19796676	1000	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001302;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_G0000410;transcript_name=HG00140_ch_T0001302;gene_name=TXLNGY;ID=HG00140_ch_T0001302;Name=TXLNGY
HG00140_chrY	CAT	exon	19773609	19773735	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001302;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001302;transcript_name=HG00140_ch_T0001302;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001302:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19773736	19793462	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001302;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001302;transcript_name=HG00140_ch_T0001302;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001302:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19793463	19793760	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001302;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001302;transcript_name=HG00140_ch_T0001302;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001302:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19793761	19794622	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001302;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001302;transcript_name=HG00140_ch_T0001302;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001302:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19794623	19794664	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001302;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001302;transcript_name=HG00140_ch_T0001302;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001302:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19794665	19794795	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001302;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001302;transcript_name=HG00140_ch_T0001302;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001302:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19794796	19794903	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001302;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001302;transcript_name=HG00140_ch_T0001302;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001302:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19794904	19795773	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001302;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001302;transcript_name=HG00140_ch_T0001302;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001302:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19795774	19795865	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001302;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001302;transcript_name=HG00140_ch_T0001302;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001302:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19795866	19796335	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001302;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001302;transcript_name=HG00140_ch_T0001302;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001302:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19796336	19796676	.	+	.	source_transcript=ENST00000789731.1;source_transcript_name=TXLNGY-232;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789731.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789731.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001302;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001302;transcript_name=HG00140_ch_T0001302;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001302:5;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19773611	19794411	1000	+	.	source_transcript=ENST00000789744.1;source_transcript_name=TXLNGY-245;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789744.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789744.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001303;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_G0000410;transcript_name=HG00140_ch_T0001303;gene_name=TXLNGY;ID=HG00140_ch_T0001303;Name=TXLNGY
HG00140_chrY	CAT	exon	19773611	19773823	.	+	.	source_transcript=ENST00000789744.1;source_transcript_name=TXLNGY-245;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789744.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789744.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001303;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001303;transcript_name=HG00140_ch_T0001303;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001303:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19773824	19793473	.	+	.	source_transcript=ENST00000789744.1;source_transcript_name=TXLNGY-245;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789744.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789744.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001303;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001303;transcript_name=HG00140_ch_T0001303;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001303:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19793474	19794411	.	+	.	source_transcript=ENST00000789744.1;source_transcript_name=TXLNGY-245;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789744.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789744.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001303;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001303;transcript_name=HG00140_ch_T0001303;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001303:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19773616	19800408	1000	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001304;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_G0000410;transcript_name=HG00140_ch_T0001304;gene_name=TXLNGY;ID=HG00140_ch_T0001304;Name=TXLNGY
HG00140_chrY	CAT	exon	19773616	19773735	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001304;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001304;transcript_name=HG00140_ch_T0001304;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001304:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19773736	19793462	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001304;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001304;transcript_name=HG00140_ch_T0001304;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001304:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19793463	19793760	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001304;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001304;transcript_name=HG00140_ch_T0001304;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001304:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19793761	19794622	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001304;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001304;transcript_name=HG00140_ch_T0001304;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001304:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19794623	19794664	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001304;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001304;transcript_name=HG00140_ch_T0001304;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001304:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19794665	19794795	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001304;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001304;transcript_name=HG00140_ch_T0001304;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001304:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19794796	19794903	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001304;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001304;transcript_name=HG00140_ch_T0001304;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001304:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19794904	19795773	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001304;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001304;transcript_name=HG00140_ch_T0001304;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001304:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19795774	19795865	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001304;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001304;transcript_name=HG00140_ch_T0001304;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001304:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19795866	19799651	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001304;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001304;transcript_name=HG00140_ch_T0001304;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001304:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19799652	19800408	.	+	.	source_transcript=ENST00000587095.2;source_transcript_name=TXLNGY-210;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000587095.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000587095.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001304;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001304;transcript_name=HG00140_ch_T0001304;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001304:5;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19773619	19794411	1000	+	.	source_transcript=ENST00000789745.1;source_transcript_name=TXLNGY-246;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789745.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001305;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_G0000410;transcript_name=HG00140_ch_T0001305;gene_name=TXLNGY;ID=HG00140_ch_T0001305;Name=TXLNGY
HG00140_chrY	CAT	exon	19773619	19773823	.	+	.	source_transcript=ENST00000789745.1;source_transcript_name=TXLNGY-246;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789745.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001305;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001305;transcript_name=HG00140_ch_T0001305;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001305:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19773824	19782957	.	+	.	source_transcript=ENST00000789745.1;source_transcript_name=TXLNGY-246;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789745.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001305;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001305;transcript_name=HG00140_ch_T0001305;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001305:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19782958	19783075	.	+	.	source_transcript=ENST00000789745.1;source_transcript_name=TXLNGY-246;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789745.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001305;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001305;transcript_name=HG00140_ch_T0001305;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001305:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19783076	19793462	.	+	.	source_transcript=ENST00000789745.1;source_transcript_name=TXLNGY-246;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789745.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001305;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001305;transcript_name=HG00140_ch_T0001305;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001305:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19793463	19794411	.	+	.	source_transcript=ENST00000789745.1;source_transcript_name=TXLNGY-246;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789745.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789745.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001305;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001305;transcript_name=HG00140_ch_T0001305;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001305:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19773619	19800411	1000	+	.	source_transcript=ENST00000789724.1;source_transcript_name=TXLNGY-225;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789724.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001306;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_G0000410;transcript_name=HG00140_ch_T0001306;gene_name=TXLNGY;ID=HG00140_ch_T0001306;Name=TXLNGY
HG00140_chrY	CAT	exon	19773619	19773735	.	+	.	source_transcript=ENST00000789724.1;source_transcript_name=TXLNGY-225;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789724.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001306;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001306;transcript_name=HG00140_ch_T0001306;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001306:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19773736	19793462	.	+	.	source_transcript=ENST00000789724.1;source_transcript_name=TXLNGY-225;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789724.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001306;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001306;transcript_name=HG00140_ch_T0001306;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001306:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19793463	19793760	.	+	.	source_transcript=ENST00000789724.1;source_transcript_name=TXLNGY-225;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789724.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001306;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001306;transcript_name=HG00140_ch_T0001306;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001306:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19793761	19795773	.	+	.	source_transcript=ENST00000789724.1;source_transcript_name=TXLNGY-225;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789724.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001306;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001306;transcript_name=HG00140_ch_T0001306;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001306:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19795774	19795865	.	+	.	source_transcript=ENST00000789724.1;source_transcript_name=TXLNGY-225;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789724.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001306;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001306;transcript_name=HG00140_ch_T0001306;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001306:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19795866	19798032	.	+	.	source_transcript=ENST00000789724.1;source_transcript_name=TXLNGY-225;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789724.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001306;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001306;transcript_name=HG00140_ch_T0001306;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001306:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19798033	19798212	.	+	.	source_transcript=ENST00000789724.1;source_transcript_name=TXLNGY-225;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789724.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001306;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001306;transcript_name=HG00140_ch_T0001306;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001306:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19798213	19799651	.	+	.	source_transcript=ENST00000789724.1;source_transcript_name=TXLNGY-225;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789724.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001306;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001306;transcript_name=HG00140_ch_T0001306;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001306:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19799652	19800411	.	+	.	source_transcript=ENST00000789724.1;source_transcript_name=TXLNGY-225;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789724.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001306;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001306;transcript_name=HG00140_ch_T0001306;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001306:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19773621	19796676	1000	+	.	source_transcript=ENST00000789732.1;source_transcript_name=TXLNGY-233;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789732.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001307;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_G0000410;transcript_name=HG00140_ch_T0001307;gene_name=TXLNGY;ID=HG00140_ch_T0001307;Name=TXLNGY
HG00140_chrY	CAT	exon	19773621	19773735	.	+	.	source_transcript=ENST00000789732.1;source_transcript_name=TXLNGY-233;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001307;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001307;transcript_name=HG00140_ch_T0001307;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001307:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19773736	19793462	.	+	.	source_transcript=ENST00000789732.1;source_transcript_name=TXLNGY-233;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001307;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001307;transcript_name=HG00140_ch_T0001307;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001307:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19793463	19793760	.	+	.	source_transcript=ENST00000789732.1;source_transcript_name=TXLNGY-233;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001307;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001307;transcript_name=HG00140_ch_T0001307;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001307:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19793761	19794622	.	+	.	source_transcript=ENST00000789732.1;source_transcript_name=TXLNGY-233;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001307;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001307;transcript_name=HG00140_ch_T0001307;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001307:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19794623	19795865	.	+	.	source_transcript=ENST00000789732.1;source_transcript_name=TXLNGY-233;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001307;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001307;transcript_name=HG00140_ch_T0001307;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001307:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19795866	19796335	.	+	.	source_transcript=ENST00000789732.1;source_transcript_name=TXLNGY-233;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001307;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001307;transcript_name=HG00140_ch_T0001307;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001307:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19796336	19796676	.	+	.	source_transcript=ENST00000789732.1;source_transcript_name=TXLNGY-233;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789732.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789732.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001307;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001307;transcript_name=HG00140_ch_T0001307;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001307:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19773625	19775694	1000	+	.	source_transcript=ENST00000789748.1;source_transcript_name=TXLNGY-249;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789748.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789748.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001308;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_G0000410;transcript_name=HG00140_ch_T0001308;gene_name=TXLNGY;ID=HG00140_ch_T0001308;Name=TXLNGY
HG00140_chrY	CAT	exon	19773625	19773823	.	+	.	source_transcript=ENST00000789748.1;source_transcript_name=TXLNGY-249;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789748.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789748.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001308;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001308;transcript_name=HG00140_ch_T0001308;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001308:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19773824	19774093	.	+	.	source_transcript=ENST00000789748.1;source_transcript_name=TXLNGY-249;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789748.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789748.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001308;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001308;transcript_name=HG00140_ch_T0001308;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001308:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19774094	19774204	.	+	.	source_transcript=ENST00000789748.1;source_transcript_name=TXLNGY-249;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789748.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789748.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001308;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001308;transcript_name=HG00140_ch_T0001308;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001308:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19774205	19775637	.	+	.	source_transcript=ENST00000789748.1;source_transcript_name=TXLNGY-249;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789748.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789748.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001308;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001308;transcript_name=HG00140_ch_T0001308;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001308:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19775638	19775694	.	+	.	source_transcript=ENST00000789748.1;source_transcript_name=TXLNGY-249;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789748.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789748.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001308;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001308;transcript_name=HG00140_ch_T0001308;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001308:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19773625	19796676	1000	+	.	source_transcript=ENST00000789733.1;source_transcript_name=TXLNGY-234;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789733.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001309;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_G0000410;transcript_name=HG00140_ch_T0001309;gene_name=TXLNGY;ID=HG00140_ch_T0001309;Name=TXLNGY
HG00140_chrY	CAT	exon	19773625	19773735	.	+	.	source_transcript=ENST00000789733.1;source_transcript_name=TXLNGY-234;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789733.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001309;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001309;transcript_name=HG00140_ch_T0001309;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001309:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19773736	19793462	.	+	.	source_transcript=ENST00000789733.1;source_transcript_name=TXLNGY-234;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789733.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001309;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001309;transcript_name=HG00140_ch_T0001309;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001309:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19793463	19793760	.	+	.	source_transcript=ENST00000789733.1;source_transcript_name=TXLNGY-234;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789733.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001309;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001309;transcript_name=HG00140_ch_T0001309;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001309:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19793761	19794622	.	+	.	source_transcript=ENST00000789733.1;source_transcript_name=TXLNGY-234;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789733.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001309;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001309;transcript_name=HG00140_ch_T0001309;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001309:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19794623	19795642	.	+	.	source_transcript=ENST00000789733.1;source_transcript_name=TXLNGY-234;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789733.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001309;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001309;transcript_name=HG00140_ch_T0001309;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001309:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19795643	19795773	.	+	.	source_transcript=ENST00000789733.1;source_transcript_name=TXLNGY-234;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789733.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001309;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001309;transcript_name=HG00140_ch_T0001309;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001309:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19795774	19795865	.	+	.	source_transcript=ENST00000789733.1;source_transcript_name=TXLNGY-234;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789733.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001309;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001309;transcript_name=HG00140_ch_T0001309;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001309:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19795866	19796335	.	+	.	source_transcript=ENST00000789733.1;source_transcript_name=TXLNGY-234;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789733.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001309;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001309;transcript_name=HG00140_ch_T0001309;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001309:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19796336	19796676	.	+	.	source_transcript=ENST00000789733.1;source_transcript_name=TXLNGY-234;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789733.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789733.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001309;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001309;transcript_name=HG00140_ch_T0001309;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001309:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19773629	19800419	1000	+	.	source_transcript=ENST00000700762.1;source_transcript_name=TXLNGY-219;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700762.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001310;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_G0000410;transcript_name=HG00140_ch_T0001310;gene_name=TXLNGY;ID=HG00140_ch_T0001310;Name=TXLNGY
HG00140_chrY	CAT	exon	19773629	19773823	.	+	.	source_transcript=ENST00000700762.1;source_transcript_name=TXLNGY-219;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001310;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001310;transcript_name=HG00140_ch_T0001310;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001310:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19773824	19793462	.	+	.	source_transcript=ENST00000700762.1;source_transcript_name=TXLNGY-219;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001310;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001310;transcript_name=HG00140_ch_T0001310;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001310:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19793463	19793760	.	+	.	source_transcript=ENST00000700762.1;source_transcript_name=TXLNGY-219;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001310;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001310;transcript_name=HG00140_ch_T0001310;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001310:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19793761	19795773	.	+	.	source_transcript=ENST00000700762.1;source_transcript_name=TXLNGY-219;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001310;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001310;transcript_name=HG00140_ch_T0001310;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001310:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19795774	19795865	.	+	.	source_transcript=ENST00000700762.1;source_transcript_name=TXLNGY-219;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001310;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001310;transcript_name=HG00140_ch_T0001310;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001310:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19795866	19798032	.	+	.	source_transcript=ENST00000700762.1;source_transcript_name=TXLNGY-219;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001310;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001310;transcript_name=HG00140_ch_T0001310;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001310:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19798033	19798212	.	+	.	source_transcript=ENST00000700762.1;source_transcript_name=TXLNGY-219;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001310;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001310;transcript_name=HG00140_ch_T0001310;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001310:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19798213	19799651	.	+	.	source_transcript=ENST00000700762.1;source_transcript_name=TXLNGY-219;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001310;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001310;transcript_name=HG00140_ch_T0001310;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001310:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19799652	19800419	.	+	.	source_transcript=ENST00000700762.1;source_transcript_name=TXLNGY-219;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000700762.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000700762.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001310;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001310;transcript_name=HG00140_ch_T0001310;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001310:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19773630	19796102	1000	+	.	source_transcript=ENST00000789740.1;source_transcript_name=TXLNGY-241;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789740.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001311;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_G0000410;transcript_name=HG00140_ch_T0001311;gene_name=TXLNGY;ID=HG00140_ch_T0001311;Name=TXLNGY
HG00140_chrY	CAT	exon	19773630	19773823	.	+	.	source_transcript=ENST00000789740.1;source_transcript_name=TXLNGY-241;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789740.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001311;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001311;transcript_name=HG00140_ch_T0001311;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001311:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19773824	19782957	.	+	.	source_transcript=ENST00000789740.1;source_transcript_name=TXLNGY-241;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789740.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001311;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001311;transcript_name=HG00140_ch_T0001311;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001311:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19782958	19783075	.	+	.	source_transcript=ENST00000789740.1;source_transcript_name=TXLNGY-241;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789740.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001311;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001311;transcript_name=HG00140_ch_T0001311;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001311:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19783076	19793462	.	+	.	source_transcript=ENST00000789740.1;source_transcript_name=TXLNGY-241;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789740.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001311;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001311;transcript_name=HG00140_ch_T0001311;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001311:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19793463	19793760	.	+	.	source_transcript=ENST00000789740.1;source_transcript_name=TXLNGY-241;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789740.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001311;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001311;transcript_name=HG00140_ch_T0001311;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001311:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19793761	19794622	.	+	.	source_transcript=ENST00000789740.1;source_transcript_name=TXLNGY-241;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789740.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001311;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001311;transcript_name=HG00140_ch_T0001311;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001311:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19794623	19796102	.	+	.	source_transcript=ENST00000789740.1;source_transcript_name=TXLNGY-241;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789740.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001311;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001311;transcript_name=HG00140_ch_T0001311;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001311:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19773631	19796977	1000	+	.	source_transcript=ENST00000789727.1;source_transcript_name=TXLNGY-228;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789727.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001312;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_G0000410;transcript_name=HG00140_ch_T0001312;gene_name=TXLNGY;ID=HG00140_ch_T0001312;Name=TXLNGY
HG00140_chrY	CAT	exon	19773631	19773823	.	+	.	source_transcript=ENST00000789727.1;source_transcript_name=TXLNGY-228;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001312;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001312;transcript_name=HG00140_ch_T0001312;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001312:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19773824	19793462	.	+	.	source_transcript=ENST00000789727.1;source_transcript_name=TXLNGY-228;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001312;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001312;transcript_name=HG00140_ch_T0001312;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001312:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19793463	19793760	.	+	.	source_transcript=ENST00000789727.1;source_transcript_name=TXLNGY-228;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001312;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001312;transcript_name=HG00140_ch_T0001312;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001312:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19793761	19795773	.	+	.	source_transcript=ENST00000789727.1;source_transcript_name=TXLNGY-228;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001312;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001312;transcript_name=HG00140_ch_T0001312;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001312:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19795774	19795865	.	+	.	source_transcript=ENST00000789727.1;source_transcript_name=TXLNGY-228;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001312;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001312;transcript_name=HG00140_ch_T0001312;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001312:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19795866	19796862	.	+	.	source_transcript=ENST00000789727.1;source_transcript_name=TXLNGY-228;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001312;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001312;transcript_name=HG00140_ch_T0001312;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001312:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19796863	19796977	.	+	.	source_transcript=ENST00000789727.1;source_transcript_name=TXLNGY-228;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789727.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789727.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001312;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001312;transcript_name=HG00140_ch_T0001312;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001312:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19773633	19800414	1000	+	.	source_transcript=ENST00000789725.1;source_transcript_name=TXLNGY-226;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789725.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001313;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_G0000410;transcript_name=HG00140_ch_T0001313;gene_name=TXLNGY;ID=HG00140_ch_T0001313;Name=TXLNGY
HG00140_chrY	CAT	exon	19773633	19773823	.	+	.	source_transcript=ENST00000789725.1;source_transcript_name=TXLNGY-226;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001313;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001313;transcript_name=HG00140_ch_T0001313;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001313:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19773824	19793462	.	+	.	source_transcript=ENST00000789725.1;source_transcript_name=TXLNGY-226;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001313;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001313;transcript_name=HG00140_ch_T0001313;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001313:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19793463	19793760	.	+	.	source_transcript=ENST00000789725.1;source_transcript_name=TXLNGY-226;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001313;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001313;transcript_name=HG00140_ch_T0001313;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001313:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19793761	19799651	.	+	.	source_transcript=ENST00000789725.1;source_transcript_name=TXLNGY-226;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001313;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001313;transcript_name=HG00140_ch_T0001313;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001313:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19799652	19800414	.	+	.	source_transcript=ENST00000789725.1;source_transcript_name=TXLNGY-226;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789725.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001313;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001313;transcript_name=HG00140_ch_T0001313;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001313:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19773647	19796543	1000	+	.	source_transcript=ENST00000789735.1;source_transcript_name=TXLNGY-236;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789735.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001315;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_G0000410;transcript_name=HG00140_ch_T0001315;gene_name=TXLNGY;ID=HG00140_ch_T0001315;Name=TXLNGY
HG00140_chrY	CAT	exon	19773647	19773823	.	+	.	source_transcript=ENST00000789735.1;source_transcript_name=TXLNGY-236;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789735.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001315;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001315;transcript_name=HG00140_ch_T0001315;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001315:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19773824	19793462	.	+	.	source_transcript=ENST00000789735.1;source_transcript_name=TXLNGY-236;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789735.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001315;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001315;transcript_name=HG00140_ch_T0001315;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001315:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19793463	19793760	.	+	.	source_transcript=ENST00000789735.1;source_transcript_name=TXLNGY-236;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789735.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001315;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001315;transcript_name=HG00140_ch_T0001315;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001315:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19793761	19794622	.	+	.	source_transcript=ENST00000789735.1;source_transcript_name=TXLNGY-236;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789735.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001315;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001315;transcript_name=HG00140_ch_T0001315;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001315:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19794623	19794664	.	+	.	source_transcript=ENST00000789735.1;source_transcript_name=TXLNGY-236;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789735.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001315;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001315;transcript_name=HG00140_ch_T0001315;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001315:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19794665	19795773	.	+	.	source_transcript=ENST00000789735.1;source_transcript_name=TXLNGY-236;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789735.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001315;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001315;transcript_name=HG00140_ch_T0001315;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001315:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19795774	19795865	.	+	.	source_transcript=ENST00000789735.1;source_transcript_name=TXLNGY-236;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789735.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001315;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001315;transcript_name=HG00140_ch_T0001315;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001315:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19795866	19796335	.	+	.	source_transcript=ENST00000789735.1;source_transcript_name=TXLNGY-236;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789735.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001315;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001315;transcript_name=HG00140_ch_T0001315;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001315:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19796336	19796543	.	+	.	source_transcript=ENST00000789735.1;source_transcript_name=TXLNGY-236;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789735.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789735.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001315;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001315;transcript_name=HG00140_ch_T0001315;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001315:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19773839	19796543	1000	+	.	source_transcript=ENST00000789736.1;source_transcript_name=TXLNGY-237;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789736.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001316;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_G0000410;transcript_name=HG00140_ch_T0001316;gene_name=TXLNGY;ID=HG00140_ch_T0001316;Name=TXLNGY
HG00140_chrY	CAT	exon	19773839	19774204	.	+	.	source_transcript=ENST00000789736.1;source_transcript_name=TXLNGY-237;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789736.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001316;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001316;transcript_name=HG00140_ch_T0001316;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001316:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19774205	19793462	.	+	.	source_transcript=ENST00000789736.1;source_transcript_name=TXLNGY-237;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789736.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001316;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001316;transcript_name=HG00140_ch_T0001316;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001316:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19793463	19793760	.	+	.	source_transcript=ENST00000789736.1;source_transcript_name=TXLNGY-237;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789736.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001316;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001316;transcript_name=HG00140_ch_T0001316;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001316:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19793761	19796335	.	+	.	source_transcript=ENST00000789736.1;source_transcript_name=TXLNGY-237;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789736.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001316;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001316;transcript_name=HG00140_ch_T0001316;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001316:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19796336	19796543	.	+	.	source_transcript=ENST00000789736.1;source_transcript_name=TXLNGY-237;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789736.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789736.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001316;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001316;transcript_name=HG00140_ch_T0001316;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001316:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19774040	19796102	1000	+	.	source_transcript=ENST00000538014.2;source_transcript_name=TXLNGY-208;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000538014.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000538014.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001317;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_G0000410;transcript_name=HG00140_ch_T0001317;gene_name=TXLNGY;ID=HG00140_ch_T0001317;Name=TXLNGY
HG00140_chrY	CAT	exon	19774040	19774204	.	+	.	source_transcript=ENST00000538014.2;source_transcript_name=TXLNGY-208;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000538014.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000538014.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001317;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001317;transcript_name=HG00140_ch_T0001317;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001317:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19774205	19775637	.	+	.	source_transcript=ENST00000538014.2;source_transcript_name=TXLNGY-208;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000538014.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000538014.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001317;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001317;transcript_name=HG00140_ch_T0001317;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001317:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19775638	19775712	.	+	.	source_transcript=ENST00000538014.2;source_transcript_name=TXLNGY-208;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000538014.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000538014.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001317;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001317;transcript_name=HG00140_ch_T0001317;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001317:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19775713	19793462	.	+	.	source_transcript=ENST00000538014.2;source_transcript_name=TXLNGY-208;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000538014.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000538014.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001317;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001317;transcript_name=HG00140_ch_T0001317;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001317:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19793463	19793760	.	+	.	source_transcript=ENST00000538014.2;source_transcript_name=TXLNGY-208;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000538014.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000538014.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001317;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001317;transcript_name=HG00140_ch_T0001317;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001317:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19793761	19794622	.	+	.	source_transcript=ENST00000538014.2;source_transcript_name=TXLNGY-208;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000538014.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000538014.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001317;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001317;transcript_name=HG00140_ch_T0001317;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001317:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19794623	19796102	.	+	.	source_transcript=ENST00000538014.2;source_transcript_name=TXLNGY-208;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000538014.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000538014.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001317;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001317;transcript_name=HG00140_ch_T0001317;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001317:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19774092	19799675	1000	+	.	source_transcript=ENST00000789726.1;source_transcript_name=TXLNGY-227;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789726.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001318;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_G0000410;transcript_name=HG00140_ch_T0001318;gene_name=TXLNGY;ID=HG00140_ch_T0001318;Name=TXLNGY
HG00140_chrY	CAT	exon	19774092	19774204	.	+	.	source_transcript=ENST00000789726.1;source_transcript_name=TXLNGY-227;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001318;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001318;transcript_name=HG00140_ch_T0001318;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001318:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19774205	19793462	.	+	.	source_transcript=ENST00000789726.1;source_transcript_name=TXLNGY-227;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001318;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001318;transcript_name=HG00140_ch_T0001318;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001318:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19793463	19793760	.	+	.	source_transcript=ENST00000789726.1;source_transcript_name=TXLNGY-227;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001318;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001318;transcript_name=HG00140_ch_T0001318;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001318:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19793761	19795773	.	+	.	source_transcript=ENST00000789726.1;source_transcript_name=TXLNGY-227;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001318;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001318;transcript_name=HG00140_ch_T0001318;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001318:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19795774	19795865	.	+	.	source_transcript=ENST00000789726.1;source_transcript_name=TXLNGY-227;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001318;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001318;transcript_name=HG00140_ch_T0001318;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001318:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19795866	19798032	.	+	.	source_transcript=ENST00000789726.1;source_transcript_name=TXLNGY-227;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001318;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001318;transcript_name=HG00140_ch_T0001318;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001318:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19798033	19798212	.	+	.	source_transcript=ENST00000789726.1;source_transcript_name=TXLNGY-227;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001318;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001318;transcript_name=HG00140_ch_T0001318;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001318:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19798213	19799651	.	+	.	source_transcript=ENST00000789726.1;source_transcript_name=TXLNGY-227;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001318;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001318;transcript_name=HG00140_ch_T0001318;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001318:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19799652	19799675	.	+	.	source_transcript=ENST00000789726.1;source_transcript_name=TXLNGY-227;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001318;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001318;transcript_name=HG00140_ch_T0001318;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001318:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19774092	19796676	1000	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001319;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_G0000410;transcript_name=HG00140_ch_T0001319;gene_name=TXLNGY;ID=HG00140_ch_T0001319;Name=TXLNGY
HG00140_chrY	CAT	exon	19774092	19774204	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001319;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001319;transcript_name=HG00140_ch_T0001319;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001319:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19774205	19782957	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001319;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001319;transcript_name=HG00140_ch_T0001319;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001319:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19782958	19783075	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001319;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001319;transcript_name=HG00140_ch_T0001319;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001319:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19783076	19793462	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001319;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001319;transcript_name=HG00140_ch_T0001319;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001319:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19793463	19793760	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001319;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001319;transcript_name=HG00140_ch_T0001319;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001319:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19793761	19794622	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001319;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001319;transcript_name=HG00140_ch_T0001319;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001319:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19794623	19795642	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001319;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001319;transcript_name=HG00140_ch_T0001319;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001319:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19795643	19795773	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001319;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001319;transcript_name=HG00140_ch_T0001319;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001319:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19795774	19795865	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001319;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001319;transcript_name=HG00140_ch_T0001319;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001319:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19795866	19796335	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001319;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001319;transcript_name=HG00140_ch_T0001319;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001319:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19796336	19796676	.	+	.	source_transcript=ENST00000789737.1;source_transcript_name=TXLNGY-238;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001319;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001319;transcript_name=HG00140_ch_T0001319;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001319:5;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19774096	19796672	1000	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001320;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_G0000410;transcript_name=HG00140_ch_T0001320;gene_name=TXLNGY;ID=HG00140_ch_T0001320;Name=TXLNGY
HG00140_chrY	CAT	exon	19774096	19774204	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001320;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001320;transcript_name=HG00140_ch_T0001320;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001320:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19774205	19793462	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001320;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001320;transcript_name=HG00140_ch_T0001320;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001320:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19793463	19793760	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001320;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001320;transcript_name=HG00140_ch_T0001320;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001320:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19793761	19794622	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001320;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001320;transcript_name=HG00140_ch_T0001320;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001320:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19794623	19794664	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001320;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001320;transcript_name=HG00140_ch_T0001320;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001320:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19794665	19794795	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001320;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001320;transcript_name=HG00140_ch_T0001320;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001320:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19794796	19794903	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001320;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001320;transcript_name=HG00140_ch_T0001320;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001320:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19794904	19795773	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001320;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001320;transcript_name=HG00140_ch_T0001320;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001320:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19795774	19795865	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001320;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001320;transcript_name=HG00140_ch_T0001320;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001320:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19795866	19796335	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001320;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001320;transcript_name=HG00140_ch_T0001320;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001320:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19796336	19796672	.	+	.	source_transcript=ENST00000789738.1;source_transcript_name=TXLNGY-239;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789738.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001320;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001320;transcript_name=HG00140_ch_T0001320;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001320:5;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19774098	19793754	1000	+	.	source_transcript=ENST00000789746.1;source_transcript_name=TXLNGY-247;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789746.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789746.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001321;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_G0000410;transcript_name=HG00140_ch_T0001321;gene_name=TXLNGY;ID=HG00140_ch_T0001321;Name=TXLNGY
HG00140_chrY	CAT	exon	19774098	19774204	.	+	.	source_transcript=ENST00000789746.1;source_transcript_name=TXLNGY-247;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789746.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789746.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001321;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001321;transcript_name=HG00140_ch_T0001321;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001321:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19774205	19775015	.	+	.	source_transcript=ENST00000789746.1;source_transcript_name=TXLNGY-247;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789746.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789746.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001321;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001321;transcript_name=HG00140_ch_T0001321;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001321:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19775016	19775172	.	+	.	source_transcript=ENST00000789746.1;source_transcript_name=TXLNGY-247;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789746.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789746.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001321;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001321;transcript_name=HG00140_ch_T0001321;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001321:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19775173	19793462	.	+	.	source_transcript=ENST00000789746.1;source_transcript_name=TXLNGY-247;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789746.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789746.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001321;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001321;transcript_name=HG00140_ch_T0001321;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001321:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19793463	19793754	.	+	.	source_transcript=ENST00000789746.1;source_transcript_name=TXLNGY-247;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789746.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789746.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001321;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001321;transcript_name=HG00140_ch_T0001321;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001321:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19774111	19796457	1000	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001322;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_G0000410;transcript_name=HG00140_ch_T0001322;gene_name=TXLNGY;ID=HG00140_ch_T0001322;Name=TXLNGY
HG00140_chrY	CAT	exon	19774111	19774204	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001322;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001322;transcript_name=HG00140_ch_T0001322;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001322:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19774205	19775126	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001322;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001322;transcript_name=HG00140_ch_T0001322;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001322:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19775127	19775172	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001322;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001322;transcript_name=HG00140_ch_T0001322;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001322:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19775173	19793462	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001322;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001322;transcript_name=HG00140_ch_T0001322;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001322:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19793463	19793760	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001322;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001322;transcript_name=HG00140_ch_T0001322;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001322:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19793761	19794622	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001322;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001322;transcript_name=HG00140_ch_T0001322;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001322:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19794623	19794664	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001322;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001322;transcript_name=HG00140_ch_T0001322;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001322:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19794665	19794795	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001322;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001322;transcript_name=HG00140_ch_T0001322;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001322:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19794796	19794903	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001322;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001322;transcript_name=HG00140_ch_T0001322;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001322:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19794904	19795773	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001322;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001322;transcript_name=HG00140_ch_T0001322;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001322:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19795774	19795865	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001322;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001322;transcript_name=HG00140_ch_T0001322;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001322:5;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19795866	19796335	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001322;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001322;transcript_name=HG00140_ch_T0001322;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001322:5;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19796336	19796457	.	+	.	source_transcript=ENST00000789741.1;source_transcript_name=TXLNGY-242;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789741.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001322;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001322;transcript_name=HG00140_ch_T0001322;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001322:6;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19794862	19799855	1000	+	.	source_transcript=ENST00000585549.5;source_transcript_name=TXLNGY-209;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000585549.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000585549.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001323;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_G0000410;transcript_name=HG00140_ch_T0001323;gene_name=TXLNGY;ID=HG00140_ch_T0001323;Name=TXLNGY
HG00140_chrY	CAT	exon	19794862	19794903	.	+	.	source_transcript=ENST00000585549.5;source_transcript_name=TXLNGY-209;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000585549.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000585549.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001323;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001323;transcript_name=HG00140_ch_T0001323;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001323:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19794904	19795773	.	+	.	source_transcript=ENST00000585549.5;source_transcript_name=TXLNGY-209;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000585549.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000585549.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001323;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001323;transcript_name=HG00140_ch_T0001323;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001323:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19795774	19795865	.	+	.	source_transcript=ENST00000585549.5;source_transcript_name=TXLNGY-209;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000585549.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000585549.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001323;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001323;transcript_name=HG00140_ch_T0001323;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001323:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19795866	19798172	.	+	.	source_transcript=ENST00000585549.5;source_transcript_name=TXLNGY-209;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000585549.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000585549.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001323;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001323;transcript_name=HG00140_ch_T0001323;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001323:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19798173	19798212	.	+	.	source_transcript=ENST00000585549.5;source_transcript_name=TXLNGY-209;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000585549.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000585549.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001323;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001323;transcript_name=HG00140_ch_T0001323;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001323:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19798213	19799651	.	+	.	source_transcript=ENST00000585549.5;source_transcript_name=TXLNGY-209;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000585549.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000585549.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001323;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001323;transcript_name=HG00140_ch_T0001323;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001323:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19799652	19799855	.	+	.	source_transcript=ENST00000585549.5;source_transcript_name=TXLNGY-209;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000585549.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000585549.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001323;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001323;transcript_name=HG00140_ch_T0001323;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001323:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19797028	19800414	1000	+	.	source_transcript=ENST00000789747.1;source_transcript_name=TXLNGY-248;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789747.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789747.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001324;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_G0000410;transcript_name=HG00140_ch_T0001324;gene_name=TXLNGY;ID=HG00140_ch_T0001324;Name=TXLNGY
HG00140_chrY	CAT	exon	19797028	19798212	.	+	.	source_transcript=ENST00000789747.1;source_transcript_name=TXLNGY-248;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789747.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789747.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001324;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001324;transcript_name=HG00140_ch_T0001324;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001324:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19798213	19799651	.	+	.	source_transcript=ENST00000789747.1;source_transcript_name=TXLNGY-248;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789747.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789747.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001324;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001324;transcript_name=HG00140_ch_T0001324;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001324:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19799652	19800414	.	+	.	source_transcript=ENST00000789747.1;source_transcript_name=TXLNGY-248;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000789747.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000789747.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001324;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001324;transcript_name=HG00140_ch_T0001324;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001324:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19798703	19812527	1000	+	.	source_transcript=ENST00000253320.8;source_transcript_name=TXLNGY-202;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000253320.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000253320.8;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001325;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_G0000410;transcript_name=HG00140_ch_T0001325;gene_name=TXLNGY;ID=HG00140_ch_T0001325;Name=TXLNGY
HG00140_chrY	CAT	exon	19798703	19799067	.	+	.	source_transcript=ENST00000253320.8;source_transcript_name=TXLNGY-202;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000253320.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000253320.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001325;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001325;transcript_name=HG00140_ch_T0001325;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001325:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19799068	19799651	.	+	.	source_transcript=ENST00000253320.8;source_transcript_name=TXLNGY-202;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000253320.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000253320.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001325;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001325;transcript_name=HG00140_ch_T0001325;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001325:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19799652	19803924	.	+	.	source_transcript=ENST00000253320.8;source_transcript_name=TXLNGY-202;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000253320.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000253320.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001325;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001325;transcript_name=HG00140_ch_T0001325;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001325:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19803925	19805997	.	+	.	source_transcript=ENST00000253320.8;source_transcript_name=TXLNGY-202;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000253320.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000253320.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001325;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001325;transcript_name=HG00140_ch_T0001325;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001325:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19805998	19806090	.	+	.	source_transcript=ENST00000253320.8;source_transcript_name=TXLNGY-202;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000253320.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000253320.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001325;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001325;transcript_name=HG00140_ch_T0001325;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001325:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19806091	19808474	.	+	.	source_transcript=ENST00000253320.8;source_transcript_name=TXLNGY-202;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000253320.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000253320.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001325;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001325;transcript_name=HG00140_ch_T0001325;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001325:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19808475	19808570	.	+	.	source_transcript=ENST00000253320.8;source_transcript_name=TXLNGY-202;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000253320.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000253320.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001325;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001325;transcript_name=HG00140_ch_T0001325;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001325:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19808571	19810055	.	+	.	source_transcript=ENST00000253320.8;source_transcript_name=TXLNGY-202;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000253320.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000253320.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001325;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001325;transcript_name=HG00140_ch_T0001325;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001325:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19810056	19812527	.	+	.	source_transcript=ENST00000253320.8;source_transcript_name=TXLNGY-202;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000253320.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000253320.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001325;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001325;transcript_name=HG00140_ch_T0001325;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001325:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19799341	19800414	1000	+	.	source_transcript=ENST00000593000.1;source_transcript_name=TXLNGY-214;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000593000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000593000.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001326;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_G0000410;transcript_name=HG00140_ch_T0001326;gene_name=TXLNGY;ID=HG00140_ch_T0001326;Name=TXLNGY
HG00140_chrY	CAT	exon	19799341	19800414	.	+	.	source_transcript=ENST00000593000.1;source_transcript_name=TXLNGY-214;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000593000.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000593000.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001326;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001326;transcript_name=HG00140_ch_T0001326;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001326:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19803616	19810310	1000	+	.	source_transcript=ENST00000592697.1;source_transcript_name=TXLNGY-213;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000592697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000592697.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001327;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_G0000410;transcript_name=HG00140_ch_T0001327;gene_name=TXLNGY;ID=HG00140_ch_T0001327;Name=TXLNGY
HG00140_chrY	CAT	exon	19803616	19803924	.	+	.	source_transcript=ENST00000592697.1;source_transcript_name=TXLNGY-213;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000592697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000592697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001327;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001327;transcript_name=HG00140_ch_T0001327;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001327:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19803925	19804810	.	+	.	source_transcript=ENST00000592697.1;source_transcript_name=TXLNGY-213;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000592697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000592697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001327;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001327;transcript_name=HG00140_ch_T0001327;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001327:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19804811	19804898	.	+	.	source_transcript=ENST00000592697.1;source_transcript_name=TXLNGY-213;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000592697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000592697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001327;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001327;transcript_name=HG00140_ch_T0001327;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001327:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19804899	19805997	.	+	.	source_transcript=ENST00000592697.1;source_transcript_name=TXLNGY-213;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000592697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000592697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001327;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001327;transcript_name=HG00140_ch_T0001327;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001327:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19805998	19806090	.	+	.	source_transcript=ENST00000592697.1;source_transcript_name=TXLNGY-213;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000592697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000592697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001327;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001327;transcript_name=HG00140_ch_T0001327;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001327:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19806091	19808474	.	+	.	source_transcript=ENST00000592697.1;source_transcript_name=TXLNGY-213;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000592697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000592697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001327;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001327;transcript_name=HG00140_ch_T0001327;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001327:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19808475	19808570	.	+	.	source_transcript=ENST00000592697.1;source_transcript_name=TXLNGY-213;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000592697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000592697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001327;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001327;transcript_name=HG00140_ch_T0001327;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001327:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19808571	19810055	.	+	.	source_transcript=ENST00000592697.1;source_transcript_name=TXLNGY-213;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000592697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000592697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001327;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001327;transcript_name=HG00140_ch_T0001327;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001327:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19810056	19810310	.	+	.	source_transcript=ENST00000592697.1;source_transcript_name=TXLNGY-213;source_gene=ENSG00000291033.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291033.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000592697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000592697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001327;gene_id=HG00140_ch_G0000410;Parent=HG00140_ch_T0001327;transcript_name=HG00140_ch_T0001327;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001327:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	19773635	19810379	.	+	.	source_gene_common_name=TXLNGY;source_gene=ENSG00000131002.15;gene_id=HG00140_ch_G0000411;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TXLNGY;gene_sources=liftoff;ID=HG00140_ch_G0000411;Name=TXLNGY
HG00140_chrY	CAT	transcript	19773635	19810379	1000	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001314;gene_id=HG00140_ch_G0000411;Parent=HG00140_ch_G0000411;transcript_name=HG00140_ch_T0001314;gene_name=TXLNGY;ID=HG00140_ch_T0001314;Name=TXLNGY
HG00140_chrY	CAT	exon	19773635	19773735	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001314;gene_id=HG00140_ch_G0000411;Parent=HG00140_ch_T0001314;transcript_name=HG00140_ch_T0001314;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001314:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19773736	19793462	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001314;gene_id=HG00140_ch_G0000411;Parent=HG00140_ch_T0001314;transcript_name=HG00140_ch_T0001314;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001314:0;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19793463	19793760	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001314;gene_id=HG00140_ch_G0000411;Parent=HG00140_ch_T0001314;transcript_name=HG00140_ch_T0001314;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001314:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19793761	19795773	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001314;gene_id=HG00140_ch_G0000411;Parent=HG00140_ch_T0001314;transcript_name=HG00140_ch_T0001314;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001314:1;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19795774	19795865	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001314;gene_id=HG00140_ch_G0000411;Parent=HG00140_ch_T0001314;transcript_name=HG00140_ch_T0001314;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001314:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19795866	19798032	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001314;gene_id=HG00140_ch_G0000411;Parent=HG00140_ch_T0001314;transcript_name=HG00140_ch_T0001314;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001314:2;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19798033	19798212	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001314;gene_id=HG00140_ch_G0000411;Parent=HG00140_ch_T0001314;transcript_name=HG00140_ch_T0001314;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001314:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19798213	19799651	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001314;gene_id=HG00140_ch_G0000411;Parent=HG00140_ch_T0001314;transcript_name=HG00140_ch_T0001314;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001314:3;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19799652	19799846	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001314;gene_id=HG00140_ch_G0000411;Parent=HG00140_ch_T0001314;transcript_name=HG00140_ch_T0001314;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001314:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19799847	19802267	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001314;gene_id=HG00140_ch_G0000411;Parent=HG00140_ch_T0001314;transcript_name=HG00140_ch_T0001314;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001314:4;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19802268	19802387	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001314;gene_id=HG00140_ch_G0000411;Parent=HG00140_ch_T0001314;transcript_name=HG00140_ch_T0001314;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001314:5;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19802388	19803849	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001314;gene_id=HG00140_ch_G0000411;Parent=HG00140_ch_T0001314;transcript_name=HG00140_ch_T0001314;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001314:5;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19803850	19803924	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001314;gene_id=HG00140_ch_G0000411;Parent=HG00140_ch_T0001314;transcript_name=HG00140_ch_T0001314;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001314:6;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19803925	19805997	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001314;gene_id=HG00140_ch_G0000411;Parent=HG00140_ch_T0001314;transcript_name=HG00140_ch_T0001314;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001314:6;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19805998	19806090	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001314;gene_id=HG00140_ch_G0000411;Parent=HG00140_ch_T0001314;transcript_name=HG00140_ch_T0001314;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001314:7;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19806091	19808474	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001314;gene_id=HG00140_ch_G0000411;Parent=HG00140_ch_T0001314;transcript_name=HG00140_ch_T0001314;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001314:7;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19808475	19808570	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001314;gene_id=HG00140_ch_G0000411;Parent=HG00140_ch_T0001314;transcript_name=HG00140_ch_T0001314;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001314:8;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19808571	19810055	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001314;gene_id=HG00140_ch_G0000411;Parent=HG00140_ch_T0001314;transcript_name=HG00140_ch_T0001314;gene_name=TXLNGY;ID=intron:HG00140_ch_T0001314:8;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19810056	19810379	.	+	.	source_transcript=ENST00000445715.6;source_transcript_name=TXLNGY-201;source_gene=ENSG00000131002.15;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000131002.15;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445715.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000445715.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;transcript_id=HG00140_ch_T0001314;gene_id=HG00140_ch_G0000411;Parent=HG00140_ch_T0001314;transcript_name=HG00140_ch_T0001314;gene_name=TXLNGY;ID=exon:HG00140_ch_T0001314:9;Name=TXLNGY;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	19804447	19805016	.	+	.	source_gene_common_name=ENSG00000267793;source_gene=ENSG00000267793.1;gene_id=HG00140_ch_G0000412;gene_biotype=transcribed_processed_pseudogene;gene_name=ENSG00000267793;gene_sources=liftoff;ID=HG00140_ch_G0000412;Name=ENSG00000267793
HG00140_chrY	CAT	transcript	19804447	19805016	1000	+	.	source_transcript=ENST00000586015.1;source_transcript_name=ENST00000586015;source_gene=ENSG00000267793.1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000267793.1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000586015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000586015.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000267793;transcript_id=HG00140_ch_T0001328;gene_id=HG00140_ch_G0000412;Parent=HG00140_ch_G0000412;transcript_name=HG00140_ch_T0001328;gene_name=ENSG00000267793;ID=HG00140_ch_T0001328;Name=ENSG00000267793
HG00140_chrY	CAT	exon	19804447	19805016	.	+	.	source_transcript=ENST00000586015.1;source_transcript_name=ENST00000586015;source_gene=ENSG00000267793.1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000267793.1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000586015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000586015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000267793;transcript_id=HG00140_ch_T0001328;gene_id=HG00140_ch_G0000412;Parent=HG00140_ch_T0001328;transcript_name=HG00140_ch_T0001328;gene_name=ENSG00000267793;ID=exon:HG00140_ch_T0001328:0;Name=ENSG00000267793;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	19898194	19900859	.	-	.	source_gene_common_name=ENSG00000260197;source_gene=ENSG00000260197.1;alternative_source_transcripts=ENST00000566193.1,ENST00000566193.1;gene_id=HG00140_ch_G0000413;gene_biotype=lncRNA;gene_name=ENSG00000260197;gene_sources=liftoff;ID=HG00140_ch_G0000413;Name=ENSG00000260197
HG00140_chrY	CAT	transcript	19898194	19900859	1000	-	.	source_transcript=ENST00000566193.1;source_transcript_name=ENST00000566193;source_gene=ENSG00000260197.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000260197.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000566193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000566193.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000260197;alternative_source_transcripts=ENST00000566193.1,ENST00000566193.1;transcript_id=HG00140_ch_T0001329;gene_id=HG00140_ch_G0000413;Parent=HG00140_ch_G0000413;transcript_name=HG00140_ch_T0001329;gene_name=ENSG00000260197;ID=HG00140_ch_T0001329;Name=ENSG00000260197
HG00140_chrY	CAT	exon	19898194	19900859	.	-	.	source_transcript=ENST00000566193.1;source_transcript_name=ENST00000566193;source_gene=ENSG00000260197.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000260197.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000566193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000566193.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000260197;alternative_source_transcripts=ENST00000566193.1,ENST00000566193.1;transcript_id=HG00140_ch_T0001329;gene_id=HG00140_ch_G0000413;Parent=HG00140_ch_T0001329;transcript_name=HG00140_ch_T0001329;gene_name=ENSG00000260197;ID=exon:HG00140_ch_T0001329:0;Name=ENSG00000260197;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	19910118	19951192	.	-	.	source_gene_common_name=KDM5D;source_gene=ENSG00000012817.16;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;gene_id=HG00140_ch_G0000414;gene_biotype=protein_coding;gene_name=KDM5D;gene_sources=liftoff;ID=HG00140_ch_G0000414;Name=KDM5D
HG00140_chrY	CAT	transcript	19910118	19950979	100	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_G0000414;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=HG00140_ch_T0001330;Name=KDM5D
HG00140_chrY	CAT	exon	19910118	19912598	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=exon:HG00140_ch_T0001330:0;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19912248	19912598	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001330:0;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	19912248	19912250	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=stop_codon:HG00140_ch_T0001330;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19912599	19912693	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=intron:HG00140_ch_T0001330:0;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19912694	19912893	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=exon:HG00140_ch_T0001330:1;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19912694	19912893	.	-	2	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001330:1;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19912894	19913046	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=intron:HG00140_ch_T0001330:1;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19913047	19913116	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=exon:HG00140_ch_T0001330:2;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19913047	19913116	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001330:2;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19913117	19913399	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=intron:HG00140_ch_T0001330:2;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19913400	19913999	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=exon:HG00140_ch_T0001330:3;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19913400	19913999	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001330:3;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19914000	19914186	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=intron:HG00140_ch_T0001330:3;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19914187	19914324	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=exon:HG00140_ch_T0001330:4;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19914187	19914324	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001330:4;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19914325	19914496	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=intron:HG00140_ch_T0001330:4;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19914497	19914676	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=exon:HG00140_ch_T0001330:5;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19914497	19914676	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001330:5;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19914677	19915127	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=intron:HG00140_ch_T0001330:5;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19915128	19915266	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=exon:HG00140_ch_T0001330:6;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19915128	19915266	.	-	1	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001330:6;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19915267	19915703	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=intron:HG00140_ch_T0001330:6;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19915704	19916062	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=exon:HG00140_ch_T0001330:7;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19915704	19916062	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001330:7;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19916063	19916628	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=intron:HG00140_ch_T0001330:7;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19916629	19916725	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=exon:HG00140_ch_T0001330:8;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19916629	19916725	.	-	1	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001330:8;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19916726	19921604	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=intron:HG00140_ch_T0001330:8;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19921605	19921752	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=exon:HG00140_ch_T0001330:9;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19921605	19921752	.	-	2	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001330:9;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19921753	19921867	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=intron:HG00140_ch_T0001330:9;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19921868	19921992	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=exon:HG00140_ch_T0001330:10;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19921868	19921992	.	-	1	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001330:10;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19921993	19922075	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=intron:HG00140_ch_T0001330:10;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19922076	19922257	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=exon:HG00140_ch_T0001330:11;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19922076	19922257	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001330:11;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19922258	19922531	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=intron:HG00140_ch_T0001330:11;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19922532	19922726	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=exon:HG00140_ch_T0001330:12;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19922532	19922726	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001330:12;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19922727	19922848	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=intron:HG00140_ch_T0001330:12;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19922849	19922968	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=exon:HG00140_ch_T0001330:13;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19922849	19922968	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001330:13;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19922969	19927124	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=intron:HG00140_ch_T0001330:13;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19927125	19927287	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=exon:HG00140_ch_T0001330:14;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19927125	19927287	.	-	1	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001330:14;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19927288	19927382	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=intron:HG00140_ch_T0001330:14;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19927383	19927564	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=exon:HG00140_ch_T0001330:15;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19927383	19927564	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001330:15;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19927565	19938024	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=intron:HG00140_ch_T0001330:15;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19938025	19938183	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=exon:HG00140_ch_T0001330:16;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19938025	19938183	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001330:16;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19938184	19938298	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=intron:HG00140_ch_T0001330:16;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19938299	19938418	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=exon:HG00140_ch_T0001330:17;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19938299	19938418	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001330:17;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19938419	19938836	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=intron:HG00140_ch_T0001330:17;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19938837	19938995	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=exon:HG00140_ch_T0001330:18;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19938837	19938995	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001330:18;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19938996	19941604	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=intron:HG00140_ch_T0001330:18;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19941605	19941750	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=exon:HG00140_ch_T0001330:19;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19941605	19941750	.	-	2	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001330:19;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19941751	19941873	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=intron:HG00140_ch_T0001330:19;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19941874	19942003	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=exon:HG00140_ch_T0001330:20;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19941874	19942003	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001330:20;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19942004	19945780	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=intron:HG00140_ch_T0001330:20;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19945781	19945915	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=exon:HG00140_ch_T0001330:21;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19945781	19945915	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001330:21;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19945916	19947570	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=intron:HG00140_ch_T0001330:21;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19947571	19947741	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=exon:HG00140_ch_T0001330:22;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19947571	19947741	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001330:22;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19947742	19947987	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=intron:HG00140_ch_T0001330:22;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19947988	19948110	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=exon:HG00140_ch_T0001330:23;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19947988	19948110	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001330:23;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19948111	19949414	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=intron:HG00140_ch_T0001330:23;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19949415	19949492	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=exon:HG00140_ch_T0001330:24;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19949415	19949492	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001330:24;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19949493	19950637	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=intron:HG00140_ch_T0001330:24;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19950638	19950806	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=exon:HG00140_ch_T0001330:25;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19950638	19950787	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001330:25;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	19950785	19950787	.	-	0	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=start_codon:HG00140_ch_T0001330;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19950807	19950923	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=intron:HG00140_ch_T0001330:25;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19950924	19950979	.	-	.	source_transcript=ENST00000317961.9;source_transcript_name=KDM5D-201;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000317961.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000317961.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000317961.9,ENST00000317961.9;transcript_id=HG00140_ch_T0001330;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001330;transcript_name=HG00140_ch_T0001330;gene_name=KDM5D;ID=exon:HG00140_ch_T0001330:26;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19910118	19922948	1000	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG00140_ch_T0001331;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_G0000414;transcript_name=HG00140_ch_T0001331;gene_name=KDM5D;ID=HG00140_ch_T0001331;Name=KDM5D
HG00140_chrY	CAT	exon	19910118	19912598	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG00140_ch_T0001331;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001331;transcript_name=HG00140_ch_T0001331;gene_name=KDM5D;ID=exon:HG00140_ch_T0001331:0;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19912599	19912693	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG00140_ch_T0001331;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001331;transcript_name=HG00140_ch_T0001331;gene_name=KDM5D;ID=intron:HG00140_ch_T0001331:0;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19912694	19913116	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG00140_ch_T0001331;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001331;transcript_name=HG00140_ch_T0001331;gene_name=KDM5D;ID=exon:HG00140_ch_T0001331:1;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19913117	19913399	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG00140_ch_T0001331;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001331;transcript_name=HG00140_ch_T0001331;gene_name=KDM5D;ID=intron:HG00140_ch_T0001331:1;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19913400	19913999	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG00140_ch_T0001331;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001331;transcript_name=HG00140_ch_T0001331;gene_name=KDM5D;ID=exon:HG00140_ch_T0001331:2;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19914000	19914186	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG00140_ch_T0001331;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001331;transcript_name=HG00140_ch_T0001331;gene_name=KDM5D;ID=intron:HG00140_ch_T0001331:2;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19914187	19914324	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG00140_ch_T0001331;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001331;transcript_name=HG00140_ch_T0001331;gene_name=KDM5D;ID=exon:HG00140_ch_T0001331:3;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19914325	19914496	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG00140_ch_T0001331;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001331;transcript_name=HG00140_ch_T0001331;gene_name=KDM5D;ID=intron:HG00140_ch_T0001331:3;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19914497	19914676	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG00140_ch_T0001331;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001331;transcript_name=HG00140_ch_T0001331;gene_name=KDM5D;ID=exon:HG00140_ch_T0001331:4;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19914677	19915127	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG00140_ch_T0001331;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001331;transcript_name=HG00140_ch_T0001331;gene_name=KDM5D;ID=intron:HG00140_ch_T0001331:4;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19915128	19915266	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG00140_ch_T0001331;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001331;transcript_name=HG00140_ch_T0001331;gene_name=KDM5D;ID=exon:HG00140_ch_T0001331:5;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19915267	19915703	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG00140_ch_T0001331;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001331;transcript_name=HG00140_ch_T0001331;gene_name=KDM5D;ID=intron:HG00140_ch_T0001331:5;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19915704	19916513	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG00140_ch_T0001331;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001331;transcript_name=HG00140_ch_T0001331;gene_name=KDM5D;ID=exon:HG00140_ch_T0001331:6;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19916514	19916628	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG00140_ch_T0001331;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001331;transcript_name=HG00140_ch_T0001331;gene_name=KDM5D;ID=intron:HG00140_ch_T0001331:6;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19916629	19916725	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG00140_ch_T0001331;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001331;transcript_name=HG00140_ch_T0001331;gene_name=KDM5D;ID=exon:HG00140_ch_T0001331:7;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19916726	19921836	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG00140_ch_T0001331;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001331;transcript_name=HG00140_ch_T0001331;gene_name=KDM5D;ID=intron:HG00140_ch_T0001331:7;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19921837	19921992	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG00140_ch_T0001331;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001331;transcript_name=HG00140_ch_T0001331;gene_name=KDM5D;ID=exon:HG00140_ch_T0001331:8;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19921993	19922075	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG00140_ch_T0001331;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001331;transcript_name=HG00140_ch_T0001331;gene_name=KDM5D;ID=intron:HG00140_ch_T0001331:8;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19922076	19922257	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG00140_ch_T0001331;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001331;transcript_name=HG00140_ch_T0001331;gene_name=KDM5D;ID=exon:HG00140_ch_T0001331:9;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19922258	19922531	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG00140_ch_T0001331;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001331;transcript_name=HG00140_ch_T0001331;gene_name=KDM5D;ID=intron:HG00140_ch_T0001331:9;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19922532	19922726	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG00140_ch_T0001331;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001331;transcript_name=HG00140_ch_T0001331;gene_name=KDM5D;ID=exon:HG00140_ch_T0001331:10;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19922727	19922848	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG00140_ch_T0001331;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001331;transcript_name=HG00140_ch_T0001331;gene_name=KDM5D;ID=intron:HG00140_ch_T0001331:10;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19922849	19922948	.	-	.	source_transcript=ENST00000469599.6;source_transcript_name=KDM5D-206;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000469599.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000469599.6;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000469599.6,ENST00000469599.6;transcript_id=HG00140_ch_T0001331;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001331;transcript_name=HG00140_ch_T0001331;gene_name=KDM5D;ID=exon:HG00140_ch_T0001331:11;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19911670	19951192	100	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_G0000414;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=HG00140_ch_T0001332;Name=KDM5D
HG00140_chrY	CAT	exon	19911670	19912598	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=exon:HG00140_ch_T0001332:0;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19912248	19912598	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001332:0;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	19912248	19912250	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=stop_codon:HG00140_ch_T0001332;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19912599	19912693	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=intron:HG00140_ch_T0001332:0;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19912694	19912893	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=exon:HG00140_ch_T0001332:1;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19912694	19912893	.	-	2	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001332:1;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19912894	19913046	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=intron:HG00140_ch_T0001332:1;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19913047	19913116	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=exon:HG00140_ch_T0001332:2;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19913047	19913116	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001332:2;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19913117	19913399	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=intron:HG00140_ch_T0001332:2;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19913400	19913999	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=exon:HG00140_ch_T0001332:3;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19913400	19913999	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001332:3;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19914000	19914186	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=intron:HG00140_ch_T0001332:3;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19914187	19914324	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=exon:HG00140_ch_T0001332:4;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19914187	19914324	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001332:4;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19914325	19914496	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=intron:HG00140_ch_T0001332:4;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19914497	19914676	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=exon:HG00140_ch_T0001332:5;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19914497	19914676	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001332:5;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19914677	19915127	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=intron:HG00140_ch_T0001332:5;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19915128	19915266	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=exon:HG00140_ch_T0001332:6;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19915128	19915266	.	-	1	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001332:6;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19915267	19915703	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=intron:HG00140_ch_T0001332:6;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19915704	19916062	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=exon:HG00140_ch_T0001332:7;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19915704	19916062	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001332:7;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19916063	19916628	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=intron:HG00140_ch_T0001332:7;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19916629	19916725	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=exon:HG00140_ch_T0001332:8;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19916629	19916725	.	-	1	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001332:8;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19916726	19921604	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=intron:HG00140_ch_T0001332:8;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19921605	19921752	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=exon:HG00140_ch_T0001332:9;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19921605	19921752	.	-	2	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001332:9;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19921753	19921867	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=intron:HG00140_ch_T0001332:9;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19921868	19921992	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=exon:HG00140_ch_T0001332:10;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19921868	19921992	.	-	1	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001332:10;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19921993	19922075	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=intron:HG00140_ch_T0001332:10;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19922076	19922257	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=exon:HG00140_ch_T0001332:11;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19922076	19922257	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001332:11;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19922258	19922531	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=intron:HG00140_ch_T0001332:11;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19922532	19922726	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=exon:HG00140_ch_T0001332:12;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19922532	19922726	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001332:12;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19922727	19922848	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=intron:HG00140_ch_T0001332:12;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19922849	19922968	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=exon:HG00140_ch_T0001332:13;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19922849	19922968	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001332:13;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19922969	19927124	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=intron:HG00140_ch_T0001332:13;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19927125	19927287	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=exon:HG00140_ch_T0001332:14;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19927125	19927287	.	-	1	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001332:14;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19927288	19927382	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=intron:HG00140_ch_T0001332:14;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19927383	19927564	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=exon:HG00140_ch_T0001332:15;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19927383	19927564	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001332:15;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19927565	19929593	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=intron:HG00140_ch_T0001332:15;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19929594	19929686	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=exon:HG00140_ch_T0001332:16;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19929594	19929686	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001332:16;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19929687	19938024	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=intron:HG00140_ch_T0001332:16;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19938025	19938183	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=exon:HG00140_ch_T0001332:17;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19938025	19938183	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001332:17;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19938184	19938298	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=intron:HG00140_ch_T0001332:17;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19938299	19938418	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=exon:HG00140_ch_T0001332:18;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19938299	19938418	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001332:18;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19938419	19938836	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=intron:HG00140_ch_T0001332:18;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19938837	19938995	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=exon:HG00140_ch_T0001332:19;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19938837	19938995	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001332:19;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19938996	19941604	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=intron:HG00140_ch_T0001332:19;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19941605	19941750	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=exon:HG00140_ch_T0001332:20;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19941605	19941750	.	-	2	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001332:20;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19941751	19941873	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=intron:HG00140_ch_T0001332:20;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19941874	19942003	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=exon:HG00140_ch_T0001332:21;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19941874	19942003	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001332:21;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19942004	19945780	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=intron:HG00140_ch_T0001332:21;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19945781	19945915	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=exon:HG00140_ch_T0001332:22;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19945781	19945915	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001332:22;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19945916	19947570	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=intron:HG00140_ch_T0001332:22;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19947571	19947741	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=exon:HG00140_ch_T0001332:23;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19947571	19947741	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001332:23;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19947742	19947987	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=intron:HG00140_ch_T0001332:23;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19947988	19948110	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=exon:HG00140_ch_T0001332:24;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19947988	19948110	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001332:24;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19948111	19949414	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=intron:HG00140_ch_T0001332:24;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19949415	19949492	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=exon:HG00140_ch_T0001332:25;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19949415	19949492	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001332:25;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19949493	19950637	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=intron:HG00140_ch_T0001332:25;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19950638	19950806	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=exon:HG00140_ch_T0001332:26;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19950638	19950787	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001332:26;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	19950785	19950787	.	-	0	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=start_codon:HG00140_ch_T0001332;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19950807	19950923	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=intron:HG00140_ch_T0001332:26;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19950924	19951192	.	-	.	source_transcript=ENST00000541639.5;source_transcript_name=KDM5D-210;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000541639.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000541639.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000541639.5,ENST00000541639.5;transcript_id=HG00140_ch_T0001332;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001332;transcript_name=HG00140_ch_T0001332;gene_name=KDM5D;ID=exon:HG00140_ch_T0001332:27;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19911673	19951014	100	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_G0000414;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=HG00140_ch_T0001333;Name=KDM5D
HG00140_chrY	CAT	exon	19911673	19912598	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=exon:HG00140_ch_T0001333:0;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19912248	19912598	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001333:0;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	19912248	19912250	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=stop_codon:HG00140_ch_T0001333;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19912599	19912693	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=intron:HG00140_ch_T0001333:0;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19912694	19912893	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=exon:HG00140_ch_T0001333:1;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19912694	19912893	.	-	2	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001333:1;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19912894	19913046	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=intron:HG00140_ch_T0001333:1;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19913047	19913116	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=exon:HG00140_ch_T0001333:2;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19913047	19913116	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001333:2;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19913117	19913399	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=intron:HG00140_ch_T0001333:2;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19913400	19913999	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=exon:HG00140_ch_T0001333:3;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19913400	19913999	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001333:3;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19914000	19914186	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=intron:HG00140_ch_T0001333:3;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19914187	19914324	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=exon:HG00140_ch_T0001333:4;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19914187	19914324	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001333:4;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19914325	19914496	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=intron:HG00140_ch_T0001333:4;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19914497	19914676	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=exon:HG00140_ch_T0001333:5;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19914497	19914676	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001333:5;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19914677	19915127	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=intron:HG00140_ch_T0001333:5;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19915128	19915266	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=exon:HG00140_ch_T0001333:6;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19915128	19915266	.	-	1	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001333:6;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19915267	19915703	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=intron:HG00140_ch_T0001333:6;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19915704	19916062	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=exon:HG00140_ch_T0001333:7;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19915704	19916062	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001333:7;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19916063	19916628	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=intron:HG00140_ch_T0001333:7;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19916629	19916725	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=exon:HG00140_ch_T0001333:8;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19916629	19916725	.	-	1	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001333:8;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19916726	19921604	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=intron:HG00140_ch_T0001333:8;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19921605	19921752	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=exon:HG00140_ch_T0001333:9;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19921605	19921752	.	-	2	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001333:9;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19921753	19921867	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=intron:HG00140_ch_T0001333:9;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19921868	19921992	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=exon:HG00140_ch_T0001333:10;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19921868	19921992	.	-	1	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001333:10;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19921993	19922075	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=intron:HG00140_ch_T0001333:10;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19922076	19922257	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=exon:HG00140_ch_T0001333:11;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19922076	19922257	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001333:11;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19922258	19922531	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=intron:HG00140_ch_T0001333:11;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19922532	19922726	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=exon:HG00140_ch_T0001333:12;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19922532	19922726	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001333:12;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19922727	19922848	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=intron:HG00140_ch_T0001333:12;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19922849	19922968	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=exon:HG00140_ch_T0001333:13;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19922849	19922968	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001333:13;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19922969	19927124	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=intron:HG00140_ch_T0001333:13;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19927125	19927287	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=exon:HG00140_ch_T0001333:14;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19927125	19927287	.	-	1	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001333:14;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19927288	19927382	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=intron:HG00140_ch_T0001333:14;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19927383	19927564	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=exon:HG00140_ch_T0001333:15;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19927383	19927564	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001333:15;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19927565	19938024	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=intron:HG00140_ch_T0001333:15;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19938025	19938183	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=exon:HG00140_ch_T0001333:16;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19938025	19938183	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001333:16;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19938184	19938298	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=intron:HG00140_ch_T0001333:16;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19938299	19938418	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=exon:HG00140_ch_T0001333:17;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19938299	19938418	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001333:17;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19938419	19938836	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=intron:HG00140_ch_T0001333:17;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19938837	19938995	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=exon:HG00140_ch_T0001333:18;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19938837	19938995	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001333:18;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19938996	19941604	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=intron:HG00140_ch_T0001333:18;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19941605	19941750	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=exon:HG00140_ch_T0001333:19;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19941605	19941750	.	-	2	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001333:19;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19941751	19941873	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=intron:HG00140_ch_T0001333:19;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19941874	19942003	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=exon:HG00140_ch_T0001333:20;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19941874	19942003	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001333:20;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19942004	19945780	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=intron:HG00140_ch_T0001333:20;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19945781	19945915	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=exon:HG00140_ch_T0001333:21;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19945781	19945915	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001333:21;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19945916	19947987	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=intron:HG00140_ch_T0001333:21;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19947988	19948110	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=exon:HG00140_ch_T0001333:22;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19947988	19948110	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001333:22;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19948111	19949414	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=intron:HG00140_ch_T0001333:22;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19949415	19949492	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=exon:HG00140_ch_T0001333:23;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19949415	19949492	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001333:23;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19949493	19950637	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=intron:HG00140_ch_T0001333:23;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19950638	19950806	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=exon:HG00140_ch_T0001333:24;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19950638	19950787	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001333:24;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	19950785	19950787	.	-	0	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=start_codon:HG00140_ch_T0001333;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19950807	19950923	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=intron:HG00140_ch_T0001333:24;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19950924	19951014	.	-	.	source_transcript=ENST00000382806.6;source_transcript_name=KDM5D-202;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382806.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382806.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000382806.6,ENST00000382806.6;transcript_id=HG00140_ch_T0001333;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001333;transcript_name=HG00140_ch_T0001333;gene_name=KDM5D;ID=exon:HG00140_ch_T0001333:25;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19911678	19928720	1000	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00140_ch_T0001334;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_G0000414;transcript_name=HG00140_ch_T0001334;gene_name=KDM5D;ID=HG00140_ch_T0001334;Name=KDM5D
HG00140_chrY	CAT	exon	19911678	19912598	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00140_ch_T0001334;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001334;transcript_name=HG00140_ch_T0001334;gene_name=KDM5D;ID=exon:HG00140_ch_T0001334:0;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19912599	19912693	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00140_ch_T0001334;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001334;transcript_name=HG00140_ch_T0001334;gene_name=KDM5D;ID=intron:HG00140_ch_T0001334:0;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19912694	19913116	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00140_ch_T0001334;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001334;transcript_name=HG00140_ch_T0001334;gene_name=KDM5D;ID=exon:HG00140_ch_T0001334:1;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19913117	19913399	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00140_ch_T0001334;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001334;transcript_name=HG00140_ch_T0001334;gene_name=KDM5D;ID=intron:HG00140_ch_T0001334:1;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19913400	19913999	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00140_ch_T0001334;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001334;transcript_name=HG00140_ch_T0001334;gene_name=KDM5D;ID=exon:HG00140_ch_T0001334:2;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19914000	19914186	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00140_ch_T0001334;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001334;transcript_name=HG00140_ch_T0001334;gene_name=KDM5D;ID=intron:HG00140_ch_T0001334:2;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19914187	19914324	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00140_ch_T0001334;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001334;transcript_name=HG00140_ch_T0001334;gene_name=KDM5D;ID=exon:HG00140_ch_T0001334:3;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19914325	19914496	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00140_ch_T0001334;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001334;transcript_name=HG00140_ch_T0001334;gene_name=KDM5D;ID=intron:HG00140_ch_T0001334:3;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19914497	19914676	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00140_ch_T0001334;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001334;transcript_name=HG00140_ch_T0001334;gene_name=KDM5D;ID=exon:HG00140_ch_T0001334:4;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19914677	19915127	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00140_ch_T0001334;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001334;transcript_name=HG00140_ch_T0001334;gene_name=KDM5D;ID=intron:HG00140_ch_T0001334:4;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19915128	19915266	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00140_ch_T0001334;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001334;transcript_name=HG00140_ch_T0001334;gene_name=KDM5D;ID=exon:HG00140_ch_T0001334:5;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19915267	19915703	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00140_ch_T0001334;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001334;transcript_name=HG00140_ch_T0001334;gene_name=KDM5D;ID=intron:HG00140_ch_T0001334:5;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19915704	19916062	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00140_ch_T0001334;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001334;transcript_name=HG00140_ch_T0001334;gene_name=KDM5D;ID=exon:HG00140_ch_T0001334:6;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19916063	19916628	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00140_ch_T0001334;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001334;transcript_name=HG00140_ch_T0001334;gene_name=KDM5D;ID=intron:HG00140_ch_T0001334:6;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19916629	19916725	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00140_ch_T0001334;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001334;transcript_name=HG00140_ch_T0001334;gene_name=KDM5D;ID=exon:HG00140_ch_T0001334:7;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19916726	19921604	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00140_ch_T0001334;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001334;transcript_name=HG00140_ch_T0001334;gene_name=KDM5D;ID=intron:HG00140_ch_T0001334:7;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19921605	19921752	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00140_ch_T0001334;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001334;transcript_name=HG00140_ch_T0001334;gene_name=KDM5D;ID=exon:HG00140_ch_T0001334:8;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19921753	19921867	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00140_ch_T0001334;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001334;transcript_name=HG00140_ch_T0001334;gene_name=KDM5D;ID=intron:HG00140_ch_T0001334:8;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19921868	19921992	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00140_ch_T0001334;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001334;transcript_name=HG00140_ch_T0001334;gene_name=KDM5D;ID=exon:HG00140_ch_T0001334:9;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19921993	19922075	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00140_ch_T0001334;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001334;transcript_name=HG00140_ch_T0001334;gene_name=KDM5D;ID=intron:HG00140_ch_T0001334:9;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19922076	19922364	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00140_ch_T0001334;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001334;transcript_name=HG00140_ch_T0001334;gene_name=KDM5D;ID=exon:HG00140_ch_T0001334:10;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19922365	19922531	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00140_ch_T0001334;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001334;transcript_name=HG00140_ch_T0001334;gene_name=KDM5D;ID=intron:HG00140_ch_T0001334:10;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19922532	19922726	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00140_ch_T0001334;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001334;transcript_name=HG00140_ch_T0001334;gene_name=KDM5D;ID=exon:HG00140_ch_T0001334:11;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19922727	19922848	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00140_ch_T0001334;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001334;transcript_name=HG00140_ch_T0001334;gene_name=KDM5D;ID=intron:HG00140_ch_T0001334:11;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19922849	19922968	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00140_ch_T0001334;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001334;transcript_name=HG00140_ch_T0001334;gene_name=KDM5D;ID=exon:HG00140_ch_T0001334:12;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19922969	19927124	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00140_ch_T0001334;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001334;transcript_name=HG00140_ch_T0001334;gene_name=KDM5D;ID=intron:HG00140_ch_T0001334:12;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19927125	19927287	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00140_ch_T0001334;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001334;transcript_name=HG00140_ch_T0001334;gene_name=KDM5D;ID=exon:HG00140_ch_T0001334:13;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19927288	19927382	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00140_ch_T0001334;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001334;transcript_name=HG00140_ch_T0001334;gene_name=KDM5D;ID=intron:HG00140_ch_T0001334:13;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19927383	19928720	.	-	.	source_transcript=ENST00000492117.1;source_transcript_name=KDM5D-209;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000492117.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000492117.1;transcript_score=299.981;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000492117.1,ENST00000492117.1;transcript_id=HG00140_ch_T0001334;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001334;transcript_name=HG00140_ch_T0001334;gene_name=KDM5D;ID=exon:HG00140_ch_T0001334:14;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19912316	19951176	100	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_G0000414;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=HG00140_ch_T0001335;Name=KDM5D
HG00140_chrY	CAT	exon	19912316	19912598	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=exon:HG00140_ch_T0001335:0;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19912316	19912598	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001335:0;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19912599	19912693	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=intron:HG00140_ch_T0001335:0;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19912694	19912893	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=exon:HG00140_ch_T0001335:1;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19912694	19912893	.	-	2	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001335:1;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19912894	19913046	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=intron:HG00140_ch_T0001335:1;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19913047	19913116	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=exon:HG00140_ch_T0001335:2;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19913047	19913116	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001335:2;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19913117	19913399	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=intron:HG00140_ch_T0001335:2;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19913400	19913999	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=exon:HG00140_ch_T0001335:3;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19913400	19913999	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001335:3;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19914000	19914186	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=intron:HG00140_ch_T0001335:3;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19914187	19914324	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=exon:HG00140_ch_T0001335:4;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19914187	19914324	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001335:4;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19914325	19914496	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=intron:HG00140_ch_T0001335:4;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19914497	19914676	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=exon:HG00140_ch_T0001335:5;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19914497	19914676	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001335:5;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19914677	19915127	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=intron:HG00140_ch_T0001335:5;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19915128	19915266	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=exon:HG00140_ch_T0001335:6;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19915128	19915266	.	-	1	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001335:6;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19915267	19915703	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=intron:HG00140_ch_T0001335:6;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19915704	19916062	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=exon:HG00140_ch_T0001335:7;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19915704	19916062	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001335:7;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19916063	19916628	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=intron:HG00140_ch_T0001335:7;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19916629	19916725	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=exon:HG00140_ch_T0001335:8;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19916629	19916725	.	-	1	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001335:8;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19916726	19921604	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=intron:HG00140_ch_T0001335:8;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19921605	19921752	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=exon:HG00140_ch_T0001335:9;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19921605	19921752	.	-	2	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001335:9;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19921753	19921867	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=intron:HG00140_ch_T0001335:9;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19921868	19921992	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=exon:HG00140_ch_T0001335:10;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19921868	19921992	.	-	1	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001335:10;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19921993	19922075	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=intron:HG00140_ch_T0001335:10;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19922076	19922257	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=exon:HG00140_ch_T0001335:11;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19922076	19922257	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001335:11;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19922258	19922531	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=intron:HG00140_ch_T0001335:11;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19922532	19922726	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=exon:HG00140_ch_T0001335:12;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19922532	19922726	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001335:12;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19922727	19922848	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=intron:HG00140_ch_T0001335:12;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19922849	19922968	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=exon:HG00140_ch_T0001335:13;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19922849	19922968	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001335:13;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19922969	19927124	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=intron:HG00140_ch_T0001335:13;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19927125	19927287	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=exon:HG00140_ch_T0001335:14;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19927125	19927287	.	-	1	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001335:14;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19927288	19927382	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=intron:HG00140_ch_T0001335:14;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19927383	19927564	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=exon:HG00140_ch_T0001335:15;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19927383	19927564	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001335:15;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19927565	19938024	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=intron:HG00140_ch_T0001335:15;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19938025	19938183	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=exon:HG00140_ch_T0001335:16;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19938025	19938183	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001335:16;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19938184	19938298	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=intron:HG00140_ch_T0001335:16;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19938299	19938418	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=exon:HG00140_ch_T0001335:17;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19938299	19938418	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001335:17;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19938419	19938836	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=intron:HG00140_ch_T0001335:17;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19938837	19938995	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=exon:HG00140_ch_T0001335:18;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19938837	19938995	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001335:18;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19938996	19941604	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=intron:HG00140_ch_T0001335:18;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19941605	19941750	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=exon:HG00140_ch_T0001335:19;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19941605	19941750	.	-	2	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001335:19;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19941751	19941873	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=intron:HG00140_ch_T0001335:19;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19941874	19942003	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=exon:HG00140_ch_T0001335:20;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19941874	19942003	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001335:20;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19942004	19945780	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=intron:HG00140_ch_T0001335:20;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19945781	19945915	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=exon:HG00140_ch_T0001335:21;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19945781	19945915	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001335:21;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19945916	19947570	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=intron:HG00140_ch_T0001335:21;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19947571	19947741	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=exon:HG00140_ch_T0001335:22;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19947571	19947741	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001335:22;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19947742	19949414	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=intron:HG00140_ch_T0001335:22;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19949415	19949492	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=exon:HG00140_ch_T0001335:23;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19949415	19949492	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001335:23;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19949493	19950637	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=intron:HG00140_ch_T0001335:23;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19950638	19950806	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=exon:HG00140_ch_T0001335:24;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19950638	19950787	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001335:24;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	19950785	19950787	.	-	0	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=start_codon:HG00140_ch_T0001335;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19950807	19950923	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=intron:HG00140_ch_T0001335:24;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19950924	19951176	.	-	.	source_transcript=ENST00000440077.5;source_transcript_name=KDM5D-204;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000440077.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000440077.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000440077.5,ENST00000440077.5;transcript_id=HG00140_ch_T0001335;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001335;transcript_name=HG00140_ch_T0001335;gene_name=KDM5D;ID=exon:HG00140_ch_T0001335:25;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19913435	19915202	100	-	.	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=HG00140_ch_T0001336;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_G0000414;transcript_name=HG00140_ch_T0001336;gene_name=KDM5D;ID=HG00140_ch_T0001336;Name=KDM5D
HG00140_chrY	CAT	exon	19913435	19913999	.	-	.	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=HG00140_ch_T0001336;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001336;transcript_name=HG00140_ch_T0001336;gene_name=KDM5D;ID=exon:HG00140_ch_T0001336:0;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19913435	19913999	.	-	0	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=HG00140_ch_T0001336;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001336;transcript_name=HG00140_ch_T0001336;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001336:0;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19914000	19914186	.	-	.	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=HG00140_ch_T0001336;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001336;transcript_name=HG00140_ch_T0001336;gene_name=KDM5D;ID=intron:HG00140_ch_T0001336:0;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19914187	19914324	.	-	.	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=HG00140_ch_T0001336;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001336;transcript_name=HG00140_ch_T0001336;gene_name=KDM5D;ID=exon:HG00140_ch_T0001336:1;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19914187	19914324	.	-	0	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=HG00140_ch_T0001336;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001336;transcript_name=HG00140_ch_T0001336;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001336:1;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19914325	19914574	.	-	.	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=HG00140_ch_T0001336;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001336;transcript_name=HG00140_ch_T0001336;gene_name=KDM5D;ID=intron:HG00140_ch_T0001336:1;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19914575	19914676	.	-	.	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=HG00140_ch_T0001336;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001336;transcript_name=HG00140_ch_T0001336;gene_name=KDM5D;ID=exon:HG00140_ch_T0001336:2;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19914575	19914676	.	-	0	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=HG00140_ch_T0001336;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001336;transcript_name=HG00140_ch_T0001336;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001336:2;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19914677	19915127	.	-	.	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=HG00140_ch_T0001336;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001336;transcript_name=HG00140_ch_T0001336;gene_name=KDM5D;ID=intron:HG00140_ch_T0001336:2;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19915128	19915202	.	-	.	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=HG00140_ch_T0001336;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001336;transcript_name=HG00140_ch_T0001336;gene_name=KDM5D;ID=exon:HG00140_ch_T0001336:3;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19915128	19915202	.	-	0	source_transcript=ENST00000415360.1;source_transcript_name=KDM5D-203;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415360.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415360.1;transcript_score=200.0;transcript_class=ortholog;valid_start=False;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000415360.1,ENST00000415360.1;transcript_id=HG00140_ch_T0001336;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001336;transcript_name=HG00140_ch_T0001336;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001336:3;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19915953	19916859	1000	-	.	source_transcript=ENST00000485154.1;source_transcript_name=KDM5D-208;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000485154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000485154.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000485154.1,ENST00000485154.1;transcript_id=HG00140_ch_T0001337;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_G0000414;transcript_name=HG00140_ch_T0001337;gene_name=KDM5D;ID=HG00140_ch_T0001337;Name=KDM5D
HG00140_chrY	CAT	exon	19915953	19916513	.	-	.	source_transcript=ENST00000485154.1;source_transcript_name=KDM5D-208;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000485154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000485154.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000485154.1,ENST00000485154.1;transcript_id=HG00140_ch_T0001337;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001337;transcript_name=HG00140_ch_T0001337;gene_name=KDM5D;ID=exon:HG00140_ch_T0001337:0;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19916514	19916628	.	-	.	source_transcript=ENST00000485154.1;source_transcript_name=KDM5D-208;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000485154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000485154.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000485154.1,ENST00000485154.1;transcript_id=HG00140_ch_T0001337;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001337;transcript_name=HG00140_ch_T0001337;gene_name=KDM5D;ID=intron:HG00140_ch_T0001337:0;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19916629	19916859	.	-	.	source_transcript=ENST00000485154.1;source_transcript_name=KDM5D-208;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000485154.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000485154.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000485154.1,ENST00000485154.1;transcript_id=HG00140_ch_T0001337;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001337;transcript_name=HG00140_ch_T0001337;gene_name=KDM5D;ID=exon:HG00140_ch_T0001337:1;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19921389	19922601	1000	-	.	source_transcript=ENST00000478891.1;source_transcript_name=KDM5D-207;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000478891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000478891.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000478891.1,ENST00000478891.1;transcript_id=HG00140_ch_T0001338;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_G0000414;transcript_name=HG00140_ch_T0001338;gene_name=KDM5D;ID=HG00140_ch_T0001338;Name=KDM5D
HG00140_chrY	CAT	exon	19921389	19921992	.	-	.	source_transcript=ENST00000478891.1;source_transcript_name=KDM5D-207;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000478891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000478891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000478891.1,ENST00000478891.1;transcript_id=HG00140_ch_T0001338;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001338;transcript_name=HG00140_ch_T0001338;gene_name=KDM5D;ID=exon:HG00140_ch_T0001338:0;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19921993	19922075	.	-	.	source_transcript=ENST00000478891.1;source_transcript_name=KDM5D-207;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000478891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000478891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000478891.1,ENST00000478891.1;transcript_id=HG00140_ch_T0001338;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001338;transcript_name=HG00140_ch_T0001338;gene_name=KDM5D;ID=intron:HG00140_ch_T0001338:0;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19922076	19922257	.	-	.	source_transcript=ENST00000478891.1;source_transcript_name=KDM5D-207;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000478891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000478891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000478891.1,ENST00000478891.1;transcript_id=HG00140_ch_T0001338;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001338;transcript_name=HG00140_ch_T0001338;gene_name=KDM5D;ID=exon:HG00140_ch_T0001338:1;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19922258	19922531	.	-	.	source_transcript=ENST00000478891.1;source_transcript_name=KDM5D-207;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000478891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000478891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000478891.1,ENST00000478891.1;transcript_id=HG00140_ch_T0001338;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001338;transcript_name=HG00140_ch_T0001338;gene_name=KDM5D;ID=intron:HG00140_ch_T0001338:1;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19922532	19922601	.	-	.	source_transcript=ENST00000478891.1;source_transcript_name=KDM5D-207;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000478891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000478891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000478891.1,ENST00000478891.1;transcript_id=HG00140_ch_T0001338;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001338;transcript_name=HG00140_ch_T0001338;gene_name=KDM5D;ID=exon:HG00140_ch_T0001338:2;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19927525	19950964	100	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00140_ch_T0001339;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_G0000414;transcript_name=HG00140_ch_T0001339;gene_name=KDM5D;ID=HG00140_ch_T0001339;Name=KDM5D
HG00140_chrY	CAT	exon	19927525	19927564	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00140_ch_T0001339;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001339;transcript_name=HG00140_ch_T0001339;gene_name=KDM5D;ID=exon:HG00140_ch_T0001339:0;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19927525	19927564	.	-	0	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00140_ch_T0001339;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001339;transcript_name=HG00140_ch_T0001339;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001339:0;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19927565	19938024	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00140_ch_T0001339;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001339;transcript_name=HG00140_ch_T0001339;gene_name=KDM5D;ID=intron:HG00140_ch_T0001339:0;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19938025	19938183	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00140_ch_T0001339;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001339;transcript_name=HG00140_ch_T0001339;gene_name=KDM5D;ID=exon:HG00140_ch_T0001339:1;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19938025	19938183	.	-	0	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00140_ch_T0001339;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001339;transcript_name=HG00140_ch_T0001339;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001339:1;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19938184	19938298	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00140_ch_T0001339;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001339;transcript_name=HG00140_ch_T0001339;gene_name=KDM5D;ID=intron:HG00140_ch_T0001339:1;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19938299	19938418	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00140_ch_T0001339;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001339;transcript_name=HG00140_ch_T0001339;gene_name=KDM5D;ID=exon:HG00140_ch_T0001339:2;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19938299	19938418	.	-	0	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00140_ch_T0001339;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001339;transcript_name=HG00140_ch_T0001339;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001339:2;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19938419	19938836	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00140_ch_T0001339;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001339;transcript_name=HG00140_ch_T0001339;gene_name=KDM5D;ID=intron:HG00140_ch_T0001339:2;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19938837	19938995	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00140_ch_T0001339;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001339;transcript_name=HG00140_ch_T0001339;gene_name=KDM5D;ID=exon:HG00140_ch_T0001339:3;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19938837	19938995	.	-	0	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00140_ch_T0001339;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001339;transcript_name=HG00140_ch_T0001339;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001339:3;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19938996	19941604	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00140_ch_T0001339;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001339;transcript_name=HG00140_ch_T0001339;gene_name=KDM5D;ID=intron:HG00140_ch_T0001339:3;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19941605	19941750	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00140_ch_T0001339;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001339;transcript_name=HG00140_ch_T0001339;gene_name=KDM5D;ID=exon:HG00140_ch_T0001339:4;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19941605	19941750	.	-	2	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00140_ch_T0001339;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001339;transcript_name=HG00140_ch_T0001339;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001339:4;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19941751	19941873	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00140_ch_T0001339;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001339;transcript_name=HG00140_ch_T0001339;gene_name=KDM5D;ID=intron:HG00140_ch_T0001339:4;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19941874	19942003	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00140_ch_T0001339;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001339;transcript_name=HG00140_ch_T0001339;gene_name=KDM5D;ID=exon:HG00140_ch_T0001339:5;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19941874	19942003	.	-	0	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00140_ch_T0001339;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001339;transcript_name=HG00140_ch_T0001339;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001339:5;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19942004	19947570	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00140_ch_T0001339;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001339;transcript_name=HG00140_ch_T0001339;gene_name=KDM5D;ID=intron:HG00140_ch_T0001339:5;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19947571	19947741	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00140_ch_T0001339;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001339;transcript_name=HG00140_ch_T0001339;gene_name=KDM5D;ID=exon:HG00140_ch_T0001339:6;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19947571	19947741	.	-	0	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00140_ch_T0001339;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001339;transcript_name=HG00140_ch_T0001339;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001339:6;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19947742	19947987	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00140_ch_T0001339;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001339;transcript_name=HG00140_ch_T0001339;gene_name=KDM5D;ID=intron:HG00140_ch_T0001339:6;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19947988	19948110	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00140_ch_T0001339;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001339;transcript_name=HG00140_ch_T0001339;gene_name=KDM5D;ID=exon:HG00140_ch_T0001339:7;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19947988	19948110	.	-	0	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00140_ch_T0001339;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001339;transcript_name=HG00140_ch_T0001339;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001339:7;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19948111	19949414	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00140_ch_T0001339;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001339;transcript_name=HG00140_ch_T0001339;gene_name=KDM5D;ID=intron:HG00140_ch_T0001339:7;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19949415	19949492	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00140_ch_T0001339;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001339;transcript_name=HG00140_ch_T0001339;gene_name=KDM5D;ID=exon:HG00140_ch_T0001339:8;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19949415	19949492	.	-	0	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00140_ch_T0001339;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001339;transcript_name=HG00140_ch_T0001339;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001339:8;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19949493	19950637	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00140_ch_T0001339;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001339;transcript_name=HG00140_ch_T0001339;gene_name=KDM5D;ID=intron:HG00140_ch_T0001339:8;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19950638	19950806	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00140_ch_T0001339;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001339;transcript_name=HG00140_ch_T0001339;gene_name=KDM5D;ID=exon:HG00140_ch_T0001339:9;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	19950638	19950787	.	-	0	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00140_ch_T0001339;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001339;transcript_name=HG00140_ch_T0001339;gene_name=KDM5D;ID=CDS:HG00140_ch_T0001339:9;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	19950785	19950787	.	-	0	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00140_ch_T0001339;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001339;transcript_name=HG00140_ch_T0001339;gene_name=KDM5D;ID=start_codon:HG00140_ch_T0001339;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19950807	19950923	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00140_ch_T0001339;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001339;transcript_name=HG00140_ch_T0001339;gene_name=KDM5D;ID=intron:HG00140_ch_T0001339:9;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19950924	19950964	.	-	.	source_transcript=ENST00000447300.1;source_transcript_name=KDM5D-205;source_gene=ENSG00000012817.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000012817.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000447300.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447300.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=False;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=ENST00000447300.1,ENST00000447300.1;transcript_id=HG00140_ch_T0001339;gene_id=HG00140_ch_G0000414;Parent=HG00140_ch_T0001339;transcript_name=HG00140_ch_T0001339;gene_name=KDM5D;ID=exon:HG00140_ch_T0001339:10;Name=KDM5D;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	19951009	19966231	.	+	.	source_gene_common_name=ENSG00000288049;source_gene=ENSG00000288049.2;alternative_source_transcripts=ENST00000653234.1,ENST00000653234.1;gene_id=HG00140_ch_G0000415;gene_biotype=lncRNA;gene_name=ENSG00000288049;gene_sources=liftoff;ID=HG00140_ch_G0000415;Name=ENSG00000288049
HG00140_chrY	CAT	transcript	19951009	19963595	1000	+	.	source_transcript=ENST00000653234.1;source_transcript_name=ENST00000653234;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653234.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653234.1;transcript_score=299.97;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000653234.1,ENST00000653234.1;transcript_id=HG00140_ch_T0001340;gene_id=HG00140_ch_G0000415;Parent=HG00140_ch_G0000415;transcript_name=HG00140_ch_T0001340;gene_name=ENSG00000288049;ID=HG00140_ch_T0001340;Name=ENSG00000288049
HG00140_chrY	CAT	exon	19951009	19951966	.	+	.	source_transcript=ENST00000653234.1;source_transcript_name=ENST00000653234;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653234.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653234.1;transcript_score=299.97;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000653234.1,ENST00000653234.1;transcript_id=HG00140_ch_T0001340;gene_id=HG00140_ch_G0000415;Parent=HG00140_ch_T0001340;transcript_name=HG00140_ch_T0001340;gene_name=ENSG00000288049;ID=exon:HG00140_ch_T0001340:0;Name=ENSG00000288049;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19951967	19960878	.	+	.	source_transcript=ENST00000653234.1;source_transcript_name=ENST00000653234;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653234.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653234.1;transcript_score=299.97;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000653234.1,ENST00000653234.1;transcript_id=HG00140_ch_T0001340;gene_id=HG00140_ch_G0000415;Parent=HG00140_ch_T0001340;transcript_name=HG00140_ch_T0001340;gene_name=ENSG00000288049;ID=intron:HG00140_ch_T0001340:0;Name=ENSG00000288049;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19960879	19961068	.	+	.	source_transcript=ENST00000653234.1;source_transcript_name=ENST00000653234;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653234.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653234.1;transcript_score=299.97;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000653234.1,ENST00000653234.1;transcript_id=HG00140_ch_T0001340;gene_id=HG00140_ch_G0000415;Parent=HG00140_ch_T0001340;transcript_name=HG00140_ch_T0001340;gene_name=ENSG00000288049;ID=exon:HG00140_ch_T0001340:1;Name=ENSG00000288049;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19961069	19961457	.	+	.	source_transcript=ENST00000653234.1;source_transcript_name=ENST00000653234;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653234.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653234.1;transcript_score=299.97;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000653234.1,ENST00000653234.1;transcript_id=HG00140_ch_T0001340;gene_id=HG00140_ch_G0000415;Parent=HG00140_ch_T0001340;transcript_name=HG00140_ch_T0001340;gene_name=ENSG00000288049;ID=intron:HG00140_ch_T0001340:1;Name=ENSG00000288049;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19961458	19963595	.	+	.	source_transcript=ENST00000653234.1;source_transcript_name=ENST00000653234;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000653234.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000653234.1;transcript_score=299.97;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000653234.1,ENST00000653234.1;transcript_id=HG00140_ch_T0001340;gene_id=HG00140_ch_G0000415;Parent=HG00140_ch_T0001340;transcript_name=HG00140_ch_T0001340;gene_name=ENSG00000288049;ID=exon:HG00140_ch_T0001340:2;Name=ENSG00000288049;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19951205	19966231	1000	+	.	source_transcript=ENST00000652994.1;source_transcript_name=ENST00000652994;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652994.1;transcript_score=299.964;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000652994.1,ENST00000652994.1;transcript_id=HG00140_ch_T0001341;gene_id=HG00140_ch_G0000415;Parent=HG00140_ch_G0000415;transcript_name=HG00140_ch_T0001341;gene_name=ENSG00000288049;ID=HG00140_ch_T0001341;Name=ENSG00000288049
HG00140_chrY	CAT	exon	19951205	19951966	.	+	.	source_transcript=ENST00000652994.1;source_transcript_name=ENST00000652994;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652994.1;transcript_score=299.964;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000652994.1,ENST00000652994.1;transcript_id=HG00140_ch_T0001341;gene_id=HG00140_ch_G0000415;Parent=HG00140_ch_T0001341;transcript_name=HG00140_ch_T0001341;gene_name=ENSG00000288049;ID=exon:HG00140_ch_T0001341:0;Name=ENSG00000288049;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19951967	19960979	.	+	.	source_transcript=ENST00000652994.1;source_transcript_name=ENST00000652994;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652994.1;transcript_score=299.964;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000652994.1,ENST00000652994.1;transcript_id=HG00140_ch_T0001341;gene_id=HG00140_ch_G0000415;Parent=HG00140_ch_T0001341;transcript_name=HG00140_ch_T0001341;gene_name=ENSG00000288049;ID=intron:HG00140_ch_T0001341:0;Name=ENSG00000288049;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19960980	19961068	.	+	.	source_transcript=ENST00000652994.1;source_transcript_name=ENST00000652994;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652994.1;transcript_score=299.964;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000652994.1,ENST00000652994.1;transcript_id=HG00140_ch_T0001341;gene_id=HG00140_ch_G0000415;Parent=HG00140_ch_T0001341;transcript_name=HG00140_ch_T0001341;gene_name=ENSG00000288049;ID=exon:HG00140_ch_T0001341:1;Name=ENSG00000288049;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19961069	19961457	.	+	.	source_transcript=ENST00000652994.1;source_transcript_name=ENST00000652994;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652994.1;transcript_score=299.964;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000652994.1,ENST00000652994.1;transcript_id=HG00140_ch_T0001341;gene_id=HG00140_ch_G0000415;Parent=HG00140_ch_T0001341;transcript_name=HG00140_ch_T0001341;gene_name=ENSG00000288049;ID=intron:HG00140_ch_T0001341:1;Name=ENSG00000288049;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19961458	19966231	.	+	.	source_transcript=ENST00000652994.1;source_transcript_name=ENST00000652994;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652994.1;transcript_score=299.964;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000652994.1,ENST00000652994.1;transcript_id=HG00140_ch_T0001341;gene_id=HG00140_ch_G0000415;Parent=HG00140_ch_T0001341;transcript_name=HG00140_ch_T0001341;gene_name=ENSG00000288049;ID=exon:HG00140_ch_T0001341:2;Name=ENSG00000288049;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19951241	19960950	1000	+	.	source_transcript=ENST00000766639.1;source_transcript_name=ENST00000766639;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766639.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766639.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000766639.1,ENST00000766639.1;transcript_id=HG00140_ch_T0001342;gene_id=HG00140_ch_G0000415;Parent=HG00140_ch_G0000415;transcript_name=HG00140_ch_T0001342;gene_name=ENSG00000288049;ID=HG00140_ch_T0001342;Name=ENSG00000288049
HG00140_chrY	CAT	exon	19951241	19951451	.	+	.	source_transcript=ENST00000766639.1;source_transcript_name=ENST00000766639;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766639.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766639.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000766639.1,ENST00000766639.1;transcript_id=HG00140_ch_T0001342;gene_id=HG00140_ch_G0000415;Parent=HG00140_ch_T0001342;transcript_name=HG00140_ch_T0001342;gene_name=ENSG00000288049;ID=exon:HG00140_ch_T0001342:0;Name=ENSG00000288049;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19951452	19960878	.	+	.	source_transcript=ENST00000766639.1;source_transcript_name=ENST00000766639;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766639.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766639.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000766639.1,ENST00000766639.1;transcript_id=HG00140_ch_T0001342;gene_id=HG00140_ch_G0000415;Parent=HG00140_ch_T0001342;transcript_name=HG00140_ch_T0001342;gene_name=ENSG00000288049;ID=intron:HG00140_ch_T0001342:0;Name=ENSG00000288049;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19960879	19960950	.	+	.	source_transcript=ENST00000766639.1;source_transcript_name=ENST00000766639;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766639.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766639.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000766639.1,ENST00000766639.1;transcript_id=HG00140_ch_T0001342;gene_id=HG00140_ch_G0000415;Parent=HG00140_ch_T0001342;transcript_name=HG00140_ch_T0001342;gene_name=ENSG00000288049;ID=exon:HG00140_ch_T0001342:1;Name=ENSG00000288049;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	19951254	19961548	1000	+	.	source_transcript=ENST00000766638.1;source_transcript_name=ENST00000766638;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766638.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766638.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000766638.1,ENST00000766638.1;transcript_id=HG00140_ch_T0001343;gene_id=HG00140_ch_G0000415;Parent=HG00140_ch_G0000415;transcript_name=HG00140_ch_T0001343;gene_name=ENSG00000288049;ID=HG00140_ch_T0001343;Name=ENSG00000288049
HG00140_chrY	CAT	exon	19951254	19951451	.	+	.	source_transcript=ENST00000766638.1;source_transcript_name=ENST00000766638;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766638.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766638.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000766638.1,ENST00000766638.1;transcript_id=HG00140_ch_T0001343;gene_id=HG00140_ch_G0000415;Parent=HG00140_ch_T0001343;transcript_name=HG00140_ch_T0001343;gene_name=ENSG00000288049;ID=exon:HG00140_ch_T0001343:0;Name=ENSG00000288049;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19951452	19960979	.	+	.	source_transcript=ENST00000766638.1;source_transcript_name=ENST00000766638;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766638.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766638.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000766638.1,ENST00000766638.1;transcript_id=HG00140_ch_T0001343;gene_id=HG00140_ch_G0000415;Parent=HG00140_ch_T0001343;transcript_name=HG00140_ch_T0001343;gene_name=ENSG00000288049;ID=intron:HG00140_ch_T0001343:0;Name=ENSG00000288049;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19960980	19961068	.	+	.	source_transcript=ENST00000766638.1;source_transcript_name=ENST00000766638;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766638.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766638.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000766638.1,ENST00000766638.1;transcript_id=HG00140_ch_T0001343;gene_id=HG00140_ch_G0000415;Parent=HG00140_ch_T0001343;transcript_name=HG00140_ch_T0001343;gene_name=ENSG00000288049;ID=exon:HG00140_ch_T0001343:1;Name=ENSG00000288049;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	19961069	19961457	.	+	.	source_transcript=ENST00000766638.1;source_transcript_name=ENST00000766638;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766638.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766638.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000766638.1,ENST00000766638.1;transcript_id=HG00140_ch_T0001343;gene_id=HG00140_ch_G0000415;Parent=HG00140_ch_T0001343;transcript_name=HG00140_ch_T0001343;gene_name=ENSG00000288049;ID=intron:HG00140_ch_T0001343:1;Name=ENSG00000288049;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	19961458	19961548	.	+	.	source_transcript=ENST00000766638.1;source_transcript_name=ENST00000766638;source_gene=ENSG00000288049.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288049.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000766638.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000766638.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288049;alternative_source_transcripts=ENST00000766638.1,ENST00000766638.1;transcript_id=HG00140_ch_T0001343;gene_id=HG00140_ch_G0000415;Parent=HG00140_ch_T0001343;transcript_name=HG00140_ch_T0001343;gene_name=ENSG00000288049;ID=exon:HG00140_ch_T0001343:2;Name=ENSG00000288049;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	20075091	20090406	.	+	.	source_gene_common_name=ENSG00000300595;source_gene=ENSG00000300595.1;alternative_source_transcripts=ENST00000772853.1,ENST00000772853.1;gene_id=HG00140_ch_G0000416;gene_biotype=lncRNA;gene_name=ENSG00000300595;gene_sources=liftoff;ID=HG00140_ch_G0000416;Name=ENSG00000300595
HG00140_chrY	CAT	transcript	20075091	20090406	1000	+	.	source_transcript=ENST00000772853.1;source_transcript_name=ENST00000772853;source_gene=ENSG00000300595.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300595.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772853.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772853.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300595;alternative_source_transcripts=ENST00000772853.1,ENST00000772853.1;transcript_id=HG00140_ch_T0001344;gene_id=HG00140_ch_G0000416;Parent=HG00140_ch_G0000416;transcript_name=HG00140_ch_T0001344;gene_name=ENSG00000300595;ID=HG00140_ch_T0001344;Name=ENSG00000300595
HG00140_chrY	CAT	exon	20075091	20075352	.	+	.	source_transcript=ENST00000772853.1;source_transcript_name=ENST00000772853;source_gene=ENSG00000300595.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300595.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772853.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772853.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300595;alternative_source_transcripts=ENST00000772853.1,ENST00000772853.1;transcript_id=HG00140_ch_T0001344;gene_id=HG00140_ch_G0000416;Parent=HG00140_ch_T0001344;transcript_name=HG00140_ch_T0001344;gene_name=ENSG00000300595;ID=exon:HG00140_ch_T0001344:0;Name=ENSG00000300595;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20075353	20089972	.	+	.	source_transcript=ENST00000772853.1;source_transcript_name=ENST00000772853;source_gene=ENSG00000300595.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300595.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772853.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772853.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300595;alternative_source_transcripts=ENST00000772853.1,ENST00000772853.1;transcript_id=HG00140_ch_T0001344;gene_id=HG00140_ch_G0000416;Parent=HG00140_ch_T0001344;transcript_name=HG00140_ch_T0001344;gene_name=ENSG00000300595;ID=intron:HG00140_ch_T0001344:0;Name=ENSG00000300595;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20089973	20090406	.	+	.	source_transcript=ENST00000772853.1;source_transcript_name=ENST00000772853;source_gene=ENSG00000300595.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300595.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772853.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772853.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300595;alternative_source_transcripts=ENST00000772853.1,ENST00000772853.1;transcript_id=HG00140_ch_T0001344;gene_id=HG00140_ch_G0000416;Parent=HG00140_ch_T0001344;transcript_name=HG00140_ch_T0001344;gene_name=ENSG00000300595;ID=exon:HG00140_ch_T0001344:1;Name=ENSG00000300595;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	20138377	20138747	.	-	.	source_gene_common_name=ENSG00000274837;source_gene=ENSG00000274837.1;alternative_source_transcripts=ENST00000616477.1,ENST00000616477.1;gene_id=HG00140_ch_G0000417;gene_biotype=processed_pseudogene;gene_name=ENSG00000274837;gene_sources=liftoff;ID=HG00140_ch_G0000417;Name=ENSG00000274837
HG00140_chrY	CAT	transcript	20138377	20138747	1000	-	.	source_transcript=ENST00000616477.1;source_transcript_name=ENST00000616477;source_gene=ENSG00000274837.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274837.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000616477.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000616477.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274837;alternative_source_transcripts=ENST00000616477.1,ENST00000616477.1;transcript_id=HG00140_ch_T0001345;gene_id=HG00140_ch_G0000417;Parent=HG00140_ch_G0000417;transcript_name=HG00140_ch_T0001345;gene_name=ENSG00000274837;ID=HG00140_ch_T0001345;Name=ENSG00000274837
HG00140_chrY	CAT	exon	20138377	20138747	.	-	.	source_transcript=ENST00000616477.1;source_transcript_name=ENST00000616477;source_gene=ENSG00000274837.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274837.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000616477.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000616477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274837;alternative_source_transcripts=ENST00000616477.1,ENST00000616477.1;transcript_id=HG00140_ch_T0001345;gene_id=HG00140_ch_G0000417;Parent=HG00140_ch_T0001345;transcript_name=HG00140_ch_T0001345;gene_name=ENSG00000274837;ID=exon:HG00140_ch_T0001345:0;Name=ENSG00000274837;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	20192796	20194073	.	-	.	source_gene_common_name=RCC2P2;source_gene=ENSG00000237997.1;alternative_source_transcripts=ENST00000422174.1,ENST00000422174.1;gene_id=HG00140_ch_G0000418;gene_biotype=processed_pseudogene;gene_name=RCC2P2;gene_sources=liftoff;ID=HG00140_ch_G0000418;Name=RCC2P2
HG00140_chrY	CAT	transcript	20192796	20194073	1000	-	.	source_transcript=ENST00000422174.1;source_transcript_name=RCC2P2-201;source_gene=ENSG00000237997.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237997.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000422174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422174.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RCC2P2;alternative_source_transcripts=ENST00000422174.1,ENST00000422174.1;transcript_id=HG00140_ch_T0001346;gene_id=HG00140_ch_G0000418;Parent=HG00140_ch_G0000418;transcript_name=HG00140_ch_T0001346;gene_name=RCC2P2;ID=HG00140_ch_T0001346;Name=RCC2P2
HG00140_chrY	CAT	exon	20192796	20192925	.	-	.	source_transcript=ENST00000422174.1;source_transcript_name=RCC2P2-201;source_gene=ENSG00000237997.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237997.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000422174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422174.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RCC2P2;alternative_source_transcripts=ENST00000422174.1,ENST00000422174.1;transcript_id=HG00140_ch_T0001346;gene_id=HG00140_ch_G0000418;Parent=HG00140_ch_T0001346;transcript_name=HG00140_ch_T0001346;gene_name=RCC2P2;ID=exon:HG00140_ch_T0001346:0;Name=RCC2P2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20192926	20193285	.	-	.	source_transcript=ENST00000422174.1;source_transcript_name=RCC2P2-201;source_gene=ENSG00000237997.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237997.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000422174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422174.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RCC2P2;alternative_source_transcripts=ENST00000422174.1,ENST00000422174.1;transcript_id=HG00140_ch_T0001346;gene_id=HG00140_ch_G0000418;Parent=HG00140_ch_T0001346;transcript_name=HG00140_ch_T0001346;gene_name=RCC2P2;ID=intron:HG00140_ch_T0001346:0;Name=RCC2P2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20193286	20194073	.	-	.	source_transcript=ENST00000422174.1;source_transcript_name=RCC2P2-201;source_gene=ENSG00000237997.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237997.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000422174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422174.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RCC2P2;alternative_source_transcripts=ENST00000422174.1,ENST00000422174.1;transcript_id=HG00140_ch_T0001346;gene_id=HG00140_ch_G0000418;Parent=HG00140_ch_T0001346;transcript_name=HG00140_ch_T0001346;gene_name=RCC2P2;ID=exon:HG00140_ch_T0001346:1;Name=RCC2P2;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	20207406	20218420	.	-	.	source_gene_common_name=ZNF886P;source_gene=ENSG00000232522.1;alternative_source_transcripts=ENST00000450781.1,ENST00000450781.1;gene_id=HG00140_ch_G0000419;gene_biotype=unprocessed_pseudogene;gene_name=ZNF886P;gene_sources=liftoff;ID=HG00140_ch_G0000419;Name=ZNF886P
HG00140_chrY	CAT	transcript	20207406	20218420	1000	-	.	source_transcript=ENST00000450781.1;source_transcript_name=ZNF886P-201;source_gene=ENSG00000232522.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232522.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450781.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF886P;alternative_source_transcripts=ENST00000450781.1,ENST00000450781.1;transcript_id=HG00140_ch_T0001347;gene_id=HG00140_ch_G0000419;Parent=HG00140_ch_G0000419;transcript_name=HG00140_ch_T0001347;gene_name=ZNF886P;ID=HG00140_ch_T0001347;Name=ZNF886P
HG00140_chrY	CAT	exon	20207406	20207920	.	-	.	source_transcript=ENST00000450781.1;source_transcript_name=ZNF886P-201;source_gene=ENSG00000232522.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232522.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450781.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF886P;alternative_source_transcripts=ENST00000450781.1,ENST00000450781.1;transcript_id=HG00140_ch_T0001347;gene_id=HG00140_ch_G0000419;Parent=HG00140_ch_T0001347;transcript_name=HG00140_ch_T0001347;gene_name=ZNF886P;ID=exon:HG00140_ch_T0001347:0;Name=ZNF886P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20207921	20211959	.	-	.	source_transcript=ENST00000450781.1;source_transcript_name=ZNF886P-201;source_gene=ENSG00000232522.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232522.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450781.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF886P;alternative_source_transcripts=ENST00000450781.1,ENST00000450781.1;transcript_id=HG00140_ch_T0001347;gene_id=HG00140_ch_G0000419;Parent=HG00140_ch_T0001347;transcript_name=HG00140_ch_T0001347;gene_name=ZNF886P;ID=intron:HG00140_ch_T0001347:0;Name=ZNF886P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20211960	20212048	.	-	.	source_transcript=ENST00000450781.1;source_transcript_name=ZNF886P-201;source_gene=ENSG00000232522.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232522.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450781.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF886P;alternative_source_transcripts=ENST00000450781.1,ENST00000450781.1;transcript_id=HG00140_ch_T0001347;gene_id=HG00140_ch_G0000419;Parent=HG00140_ch_T0001347;transcript_name=HG00140_ch_T0001347;gene_name=ZNF886P;ID=exon:HG00140_ch_T0001347:1;Name=ZNF886P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20212049	20218301	.	-	.	source_transcript=ENST00000450781.1;source_transcript_name=ZNF886P-201;source_gene=ENSG00000232522.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232522.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450781.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF886P;alternative_source_transcripts=ENST00000450781.1,ENST00000450781.1;transcript_id=HG00140_ch_T0001347;gene_id=HG00140_ch_G0000419;Parent=HG00140_ch_T0001347;transcript_name=HG00140_ch_T0001347;gene_name=ZNF886P;ID=intron:HG00140_ch_T0001347:1;Name=ZNF886P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20218302	20218420	.	-	.	source_transcript=ENST00000450781.1;source_transcript_name=ZNF886P-201;source_gene=ENSG00000232522.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232522.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450781.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF886P;alternative_source_transcripts=ENST00000450781.1,ENST00000450781.1;transcript_id=HG00140_ch_T0001347;gene_id=HG00140_ch_G0000419;Parent=HG00140_ch_T0001347;transcript_name=HG00140_ch_T0001347;gene_name=ZNF886P;ID=exon:HG00140_ch_T0001347:2;Name=ZNF886P;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	20547079	20553824	.	+	.	source_gene_common_name=ZNF885P;source_gene=ENSG00000228764.1;alternative_source_transcripts=ENST00000420174.1,ENST00000420174.1;gene_id=HG00140_ch_G0000420;gene_biotype=processed_pseudogene;gene_name=ZNF885P;gene_sources=liftoff;ID=HG00140_ch_G0000420;Name=ZNF885P
HG00140_chrY	CAT	transcript	20547079	20553824	1000	+	.	source_transcript=ENST00000420174.1;source_transcript_name=ZNF885P-201;source_gene=ENSG00000228764.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228764.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420174.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF885P;alternative_source_transcripts=ENST00000420174.1,ENST00000420174.1;transcript_id=HG00140_ch_T0001348;gene_id=HG00140_ch_G0000420;Parent=HG00140_ch_G0000420;transcript_name=HG00140_ch_T0001348;gene_name=ZNF885P;ID=HG00140_ch_T0001348;Name=ZNF885P
HG00140_chrY	CAT	exon	20547079	20547138	.	+	.	source_transcript=ENST00000420174.1;source_transcript_name=ZNF885P-201;source_gene=ENSG00000228764.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228764.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420174.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF885P;alternative_source_transcripts=ENST00000420174.1,ENST00000420174.1;transcript_id=HG00140_ch_T0001348;gene_id=HG00140_ch_G0000420;Parent=HG00140_ch_T0001348;transcript_name=HG00140_ch_T0001348;gene_name=ZNF885P;ID=exon:HG00140_ch_T0001348:0;Name=ZNF885P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20547139	20552535	.	+	.	source_transcript=ENST00000420174.1;source_transcript_name=ZNF885P-201;source_gene=ENSG00000228764.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228764.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420174.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF885P;alternative_source_transcripts=ENST00000420174.1,ENST00000420174.1;transcript_id=HG00140_ch_T0001348;gene_id=HG00140_ch_G0000420;Parent=HG00140_ch_T0001348;transcript_name=HG00140_ch_T0001348;gene_name=ZNF885P;ID=intron:HG00140_ch_T0001348:0;Name=ZNF885P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20552536	20553047	.	+	.	source_transcript=ENST00000420174.1;source_transcript_name=ZNF885P-201;source_gene=ENSG00000228764.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228764.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420174.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF885P;alternative_source_transcripts=ENST00000420174.1,ENST00000420174.1;transcript_id=HG00140_ch_T0001348;gene_id=HG00140_ch_G0000420;Parent=HG00140_ch_T0001348;transcript_name=HG00140_ch_T0001348;gene_name=ZNF885P;ID=exon:HG00140_ch_T0001348:1;Name=ZNF885P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20553048	20553298	.	+	.	source_transcript=ENST00000420174.1;source_transcript_name=ZNF885P-201;source_gene=ENSG00000228764.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228764.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420174.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF885P;alternative_source_transcripts=ENST00000420174.1,ENST00000420174.1;transcript_id=HG00140_ch_T0001348;gene_id=HG00140_ch_G0000420;Parent=HG00140_ch_T0001348;transcript_name=HG00140_ch_T0001348;gene_name=ZNF885P;ID=intron:HG00140_ch_T0001348:1;Name=ZNF885P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20553299	20553824	.	+	.	source_transcript=ENST00000420174.1;source_transcript_name=ZNF885P-201;source_gene=ENSG00000228764.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000228764.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420174.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420174.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF885P;alternative_source_transcripts=ENST00000420174.1,ENST00000420174.1;transcript_id=HG00140_ch_T0001348;gene_id=HG00140_ch_G0000420;Parent=HG00140_ch_T0001348;transcript_name=HG00140_ch_T0001348;gene_name=ZNF885P;ID=exon:HG00140_ch_T0001348:2;Name=ZNF885P;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	20621944	20732530	.	-	.	source_gene_common_name=TTTY10;source_gene=ENSG00000229236.4;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;gene_id=HG00140_ch_G0000421;gene_biotype=lncRNA;gene_name=TTTY10;gene_sources=liftoff;ID=HG00140_ch_G0000421;Name=TTTY10
HG00140_chrY	CAT	transcript	20621944	20732508	1000	-	.	source_transcript=ENST00000661812.1;source_transcript_name=TTTY10-208;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000661812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000661812.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;transcript_id=HG00140_ch_T0001349;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_G0000421;transcript_name=HG00140_ch_T0001349;gene_name=TTTY10;ID=HG00140_ch_T0001349;Name=TTTY10
HG00140_chrY	CAT	exon	20621944	20622850	.	-	.	source_transcript=ENST00000661812.1;source_transcript_name=TTTY10-208;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000661812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000661812.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;transcript_id=HG00140_ch_T0001349;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001349;transcript_name=HG00140_ch_T0001349;gene_name=TTTY10;ID=exon:HG00140_ch_T0001349:0;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20622851	20623455	.	-	.	source_transcript=ENST00000661812.1;source_transcript_name=TTTY10-208;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000661812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000661812.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;transcript_id=HG00140_ch_T0001349;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001349;transcript_name=HG00140_ch_T0001349;gene_name=TTTY10;ID=intron:HG00140_ch_T0001349:0;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20623456	20623695	.	-	.	source_transcript=ENST00000661812.1;source_transcript_name=TTTY10-208;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000661812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000661812.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;transcript_id=HG00140_ch_T0001349;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001349;transcript_name=HG00140_ch_T0001349;gene_name=TTTY10;ID=exon:HG00140_ch_T0001349:1;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20623696	20625216	.	-	.	source_transcript=ENST00000661812.1;source_transcript_name=TTTY10-208;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000661812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000661812.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;transcript_id=HG00140_ch_T0001349;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001349;transcript_name=HG00140_ch_T0001349;gene_name=TTTY10;ID=intron:HG00140_ch_T0001349:1;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20625217	20625276	.	-	.	source_transcript=ENST00000661812.1;source_transcript_name=TTTY10-208;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000661812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000661812.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;transcript_id=HG00140_ch_T0001349;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001349;transcript_name=HG00140_ch_T0001349;gene_name=TTTY10;ID=exon:HG00140_ch_T0001349:2;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20625277	20664361	.	-	.	source_transcript=ENST00000661812.1;source_transcript_name=TTTY10-208;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000661812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000661812.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;transcript_id=HG00140_ch_T0001349;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001349;transcript_name=HG00140_ch_T0001349;gene_name=TTTY10;ID=intron:HG00140_ch_T0001349:2;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20664362	20664466	.	-	.	source_transcript=ENST00000661812.1;source_transcript_name=TTTY10-208;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000661812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000661812.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;transcript_id=HG00140_ch_T0001349;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001349;transcript_name=HG00140_ch_T0001349;gene_name=TTTY10;ID=exon:HG00140_ch_T0001349:3;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20664467	20732116	.	-	.	source_transcript=ENST00000661812.1;source_transcript_name=TTTY10-208;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000661812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000661812.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;transcript_id=HG00140_ch_T0001349;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001349;transcript_name=HG00140_ch_T0001349;gene_name=TTTY10;ID=intron:HG00140_ch_T0001349:3;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20732117	20732508	.	-	.	source_transcript=ENST00000661812.1;source_transcript_name=TTTY10-208;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000661812.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000661812.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000661812.1,ENST00000661812.1;transcript_id=HG00140_ch_T0001349;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001349;transcript_name=HG00140_ch_T0001349;gene_name=TTTY10;ID=exon:HG00140_ch_T0001349:4;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	20621944	20732526	1000	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG00140_ch_T0001350;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_G0000421;transcript_name=HG00140_ch_T0001350;gene_name=TTTY10;ID=HG00140_ch_T0001350;Name=TTTY10
HG00140_chrY	CAT	exon	20621944	20622850	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG00140_ch_T0001350;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001350;transcript_name=HG00140_ch_T0001350;gene_name=TTTY10;ID=exon:HG00140_ch_T0001350:0;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20622851	20623455	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG00140_ch_T0001350;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001350;transcript_name=HG00140_ch_T0001350;gene_name=TTTY10;ID=intron:HG00140_ch_T0001350:0;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20623456	20623695	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG00140_ch_T0001350;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001350;transcript_name=HG00140_ch_T0001350;gene_name=TTTY10;ID=exon:HG00140_ch_T0001350:1;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20623696	20625216	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG00140_ch_T0001350;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001350;transcript_name=HG00140_ch_T0001350;gene_name=TTTY10;ID=intron:HG00140_ch_T0001350:1;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20625217	20625276	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG00140_ch_T0001350;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001350;transcript_name=HG00140_ch_T0001350;gene_name=TTTY10;ID=exon:HG00140_ch_T0001350:2;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20625277	20626899	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG00140_ch_T0001350;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001350;transcript_name=HG00140_ch_T0001350;gene_name=TTTY10;ID=intron:HG00140_ch_T0001350:2;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20626900	20627009	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG00140_ch_T0001350;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001350;transcript_name=HG00140_ch_T0001350;gene_name=TTTY10;ID=exon:HG00140_ch_T0001350:3;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20627010	20664361	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG00140_ch_T0001350;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001350;transcript_name=HG00140_ch_T0001350;gene_name=TTTY10;ID=intron:HG00140_ch_T0001350:3;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20664362	20664466	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG00140_ch_T0001350;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001350;transcript_name=HG00140_ch_T0001350;gene_name=TTTY10;ID=exon:HG00140_ch_T0001350:4;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20664467	20675280	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG00140_ch_T0001350;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001350;transcript_name=HG00140_ch_T0001350;gene_name=TTTY10;ID=intron:HG00140_ch_T0001350:4;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20675281	20675339	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG00140_ch_T0001350;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001350;transcript_name=HG00140_ch_T0001350;gene_name=TTTY10;ID=exon:HG00140_ch_T0001350:5;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20675340	20676045	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG00140_ch_T0001350;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001350;transcript_name=HG00140_ch_T0001350;gene_name=TTTY10;ID=intron:HG00140_ch_T0001350:5;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20676046	20676243	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG00140_ch_T0001350;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001350;transcript_name=HG00140_ch_T0001350;gene_name=TTTY10;ID=exon:HG00140_ch_T0001350:6;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20676244	20678141	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG00140_ch_T0001350;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001350;transcript_name=HG00140_ch_T0001350;gene_name=TTTY10;ID=intron:HG00140_ch_T0001350:6;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20678142	20678310	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG00140_ch_T0001350;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001350;transcript_name=HG00140_ch_T0001350;gene_name=TTTY10;ID=exon:HG00140_ch_T0001350:7;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20678311	20681277	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG00140_ch_T0001350;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001350;transcript_name=HG00140_ch_T0001350;gene_name=TTTY10;ID=intron:HG00140_ch_T0001350:7;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20681278	20681450	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG00140_ch_T0001350;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001350;transcript_name=HG00140_ch_T0001350;gene_name=TTTY10;ID=exon:HG00140_ch_T0001350:8;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20681451	20732116	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG00140_ch_T0001350;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001350;transcript_name=HG00140_ch_T0001350;gene_name=TTTY10;ID=intron:HG00140_ch_T0001350:8;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20732117	20732526	.	-	.	source_transcript=ENST00000666990.2;source_transcript_name=TTTY10-211;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666990.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000666990.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666990.2,ENST00000666990.2;transcript_id=HG00140_ch_T0001350;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001350;transcript_name=HG00140_ch_T0001350;gene_name=TTTY10;ID=exon:HG00140_ch_T0001350:9;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	20621944	20732508	1000	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=HG00140_ch_T0001351;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_G0000421;transcript_name=HG00140_ch_T0001351;gene_name=TTTY10;ID=HG00140_ch_T0001351;Name=TTTY10
HG00140_chrY	CAT	exon	20621944	20622850	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=HG00140_ch_T0001351;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001351;transcript_name=HG00140_ch_T0001351;gene_name=TTTY10;ID=exon:HG00140_ch_T0001351:0;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20622851	20623455	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=HG00140_ch_T0001351;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001351;transcript_name=HG00140_ch_T0001351;gene_name=TTTY10;ID=intron:HG00140_ch_T0001351:0;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20623456	20623695	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=HG00140_ch_T0001351;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001351;transcript_name=HG00140_ch_T0001351;gene_name=TTTY10;ID=exon:HG00140_ch_T0001351:1;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20623696	20625216	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=HG00140_ch_T0001351;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001351;transcript_name=HG00140_ch_T0001351;gene_name=TTTY10;ID=intron:HG00140_ch_T0001351:1;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20625217	20625276	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=HG00140_ch_T0001351;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001351;transcript_name=HG00140_ch_T0001351;gene_name=TTTY10;ID=exon:HG00140_ch_T0001351:2;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20625277	20626899	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=HG00140_ch_T0001351;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001351;transcript_name=HG00140_ch_T0001351;gene_name=TTTY10;ID=intron:HG00140_ch_T0001351:2;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20626900	20627009	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=HG00140_ch_T0001351;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001351;transcript_name=HG00140_ch_T0001351;gene_name=TTTY10;ID=exon:HG00140_ch_T0001351:3;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20627010	20664361	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=HG00140_ch_T0001351;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001351;transcript_name=HG00140_ch_T0001351;gene_name=TTTY10;ID=intron:HG00140_ch_T0001351:3;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20664362	20664466	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=HG00140_ch_T0001351;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001351;transcript_name=HG00140_ch_T0001351;gene_name=TTTY10;ID=exon:HG00140_ch_T0001351:4;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20664467	20678141	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=HG00140_ch_T0001351;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001351;transcript_name=HG00140_ch_T0001351;gene_name=TTTY10;ID=intron:HG00140_ch_T0001351:4;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20678142	20678310	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=HG00140_ch_T0001351;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001351;transcript_name=HG00140_ch_T0001351;gene_name=TTTY10;ID=exon:HG00140_ch_T0001351:5;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20678311	20681277	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=HG00140_ch_T0001351;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001351;transcript_name=HG00140_ch_T0001351;gene_name=TTTY10;ID=intron:HG00140_ch_T0001351:5;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20681278	20681450	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=HG00140_ch_T0001351;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001351;transcript_name=HG00140_ch_T0001351;gene_name=TTTY10;ID=exon:HG00140_ch_T0001351:6;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20681451	20732116	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=HG00140_ch_T0001351;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001351;transcript_name=HG00140_ch_T0001351;gene_name=TTTY10;ID=intron:HG00140_ch_T0001351:6;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20732117	20732508	.	-	.	source_transcript=ENST00000670518.1;source_transcript_name=TTTY10-213;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000670518.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000670518.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000670518.1,ENST00000670518.1;transcript_id=HG00140_ch_T0001351;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001351;transcript_name=HG00140_ch_T0001351;gene_name=TTTY10;ID=exon:HG00140_ch_T0001351:7;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	20622017	20732233	1000	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG00140_ch_T0001352;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_G0000421;transcript_name=HG00140_ch_T0001352;gene_name=TTTY10;ID=HG00140_ch_T0001352;Name=TTTY10
HG00140_chrY	CAT	exon	20622017	20622850	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG00140_ch_T0001352;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001352;transcript_name=HG00140_ch_T0001352;gene_name=TTTY10;ID=exon:HG00140_ch_T0001352:0;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20622851	20623455	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG00140_ch_T0001352;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001352;transcript_name=HG00140_ch_T0001352;gene_name=TTTY10;ID=intron:HG00140_ch_T0001352:0;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20623456	20623695	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG00140_ch_T0001352;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001352;transcript_name=HG00140_ch_T0001352;gene_name=TTTY10;ID=exon:HG00140_ch_T0001352:1;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20623696	20625216	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG00140_ch_T0001352;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001352;transcript_name=HG00140_ch_T0001352;gene_name=TTTY10;ID=intron:HG00140_ch_T0001352:1;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20625217	20625276	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG00140_ch_T0001352;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001352;transcript_name=HG00140_ch_T0001352;gene_name=TTTY10;ID=exon:HG00140_ch_T0001352:2;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20625277	20626899	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG00140_ch_T0001352;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001352;transcript_name=HG00140_ch_T0001352;gene_name=TTTY10;ID=intron:HG00140_ch_T0001352:2;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20626900	20627009	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG00140_ch_T0001352;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001352;transcript_name=HG00140_ch_T0001352;gene_name=TTTY10;ID=exon:HG00140_ch_T0001352:3;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20627010	20664361	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG00140_ch_T0001352;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001352;transcript_name=HG00140_ch_T0001352;gene_name=TTTY10;ID=intron:HG00140_ch_T0001352:3;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20664362	20664466	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG00140_ch_T0001352;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001352;transcript_name=HG00140_ch_T0001352;gene_name=TTTY10;ID=exon:HG00140_ch_T0001352:4;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20664467	20675280	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG00140_ch_T0001352;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001352;transcript_name=HG00140_ch_T0001352;gene_name=TTTY10;ID=intron:HG00140_ch_T0001352:4;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20675281	20675339	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG00140_ch_T0001352;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001352;transcript_name=HG00140_ch_T0001352;gene_name=TTTY10;ID=exon:HG00140_ch_T0001352:5;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20675340	20676045	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG00140_ch_T0001352;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001352;transcript_name=HG00140_ch_T0001352;gene_name=TTTY10;ID=intron:HG00140_ch_T0001352:5;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20676046	20676243	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG00140_ch_T0001352;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001352;transcript_name=HG00140_ch_T0001352;gene_name=TTTY10;ID=exon:HG00140_ch_T0001352:6;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20676244	20678141	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG00140_ch_T0001352;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001352;transcript_name=HG00140_ch_T0001352;gene_name=TTTY10;ID=intron:HG00140_ch_T0001352:6;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20678142	20678310	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG00140_ch_T0001352;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001352;transcript_name=HG00140_ch_T0001352;gene_name=TTTY10;ID=exon:HG00140_ch_T0001352:7;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20678311	20732116	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG00140_ch_T0001352;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001352;transcript_name=HG00140_ch_T0001352;gene_name=TTTY10;ID=intron:HG00140_ch_T0001352:7;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20732117	20732233	.	-	.	source_transcript=ENST00000657696.1;source_transcript_name=TTTY10-204;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000657696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000657696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000657696.1,ENST00000657696.1;transcript_id=HG00140_ch_T0001352;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001352;transcript_name=HG00140_ch_T0001352;gene_name=TTTY10;ID=exon:HG00140_ch_T0001352:8;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	20622108	20732267	1000	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=HG00140_ch_T0001353;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_G0000421;transcript_name=HG00140_ch_T0001353;gene_name=TTTY10;ID=HG00140_ch_T0001353;Name=TTTY10
HG00140_chrY	CAT	exon	20622108	20622850	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=HG00140_ch_T0001353;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001353;transcript_name=HG00140_ch_T0001353;gene_name=TTTY10;ID=exon:HG00140_ch_T0001353:0;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20622851	20623455	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=HG00140_ch_T0001353;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001353;transcript_name=HG00140_ch_T0001353;gene_name=TTTY10;ID=intron:HG00140_ch_T0001353:0;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20623456	20623695	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=HG00140_ch_T0001353;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001353;transcript_name=HG00140_ch_T0001353;gene_name=TTTY10;ID=exon:HG00140_ch_T0001353:1;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20623696	20625216	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=HG00140_ch_T0001353;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001353;transcript_name=HG00140_ch_T0001353;gene_name=TTTY10;ID=intron:HG00140_ch_T0001353:1;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20625217	20625276	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=HG00140_ch_T0001353;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001353;transcript_name=HG00140_ch_T0001353;gene_name=TTTY10;ID=exon:HG00140_ch_T0001353:2;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20625277	20626899	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=HG00140_ch_T0001353;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001353;transcript_name=HG00140_ch_T0001353;gene_name=TTTY10;ID=intron:HG00140_ch_T0001353:2;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20626900	20627009	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=HG00140_ch_T0001353;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001353;transcript_name=HG00140_ch_T0001353;gene_name=TTTY10;ID=exon:HG00140_ch_T0001353:3;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20627010	20664361	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=HG00140_ch_T0001353;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001353;transcript_name=HG00140_ch_T0001353;gene_name=TTTY10;ID=intron:HG00140_ch_T0001353:3;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20664362	20664466	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=HG00140_ch_T0001353;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001353;transcript_name=HG00140_ch_T0001353;gene_name=TTTY10;ID=exon:HG00140_ch_T0001353:4;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20664467	20732116	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=HG00140_ch_T0001353;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001353;transcript_name=HG00140_ch_T0001353;gene_name=TTTY10;ID=intron:HG00140_ch_T0001353:4;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20732117	20732267	.	-	.	source_transcript=ENST00000660111.1;source_transcript_name=TTTY10-207;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660111.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660111.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000660111.1,ENST00000660111.1;transcript_id=HG00140_ch_T0001353;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001353;transcript_name=HG00140_ch_T0001353;gene_name=TTTY10;ID=exon:HG00140_ch_T0001353:5;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	20622344	20732373	1000	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG00140_ch_T0001354;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_G0000421;transcript_name=HG00140_ch_T0001354;gene_name=TTTY10;ID=HG00140_ch_T0001354;Name=TTTY10
HG00140_chrY	CAT	exon	20622344	20622850	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG00140_ch_T0001354;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001354;transcript_name=HG00140_ch_T0001354;gene_name=TTTY10;ID=exon:HG00140_ch_T0001354:0;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20622851	20623455	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG00140_ch_T0001354;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001354;transcript_name=HG00140_ch_T0001354;gene_name=TTTY10;ID=intron:HG00140_ch_T0001354:0;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20623456	20623695	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG00140_ch_T0001354;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001354;transcript_name=HG00140_ch_T0001354;gene_name=TTTY10;ID=exon:HG00140_ch_T0001354:1;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20623696	20625216	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG00140_ch_T0001354;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001354;transcript_name=HG00140_ch_T0001354;gene_name=TTTY10;ID=intron:HG00140_ch_T0001354:1;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20625217	20625276	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG00140_ch_T0001354;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001354;transcript_name=HG00140_ch_T0001354;gene_name=TTTY10;ID=exon:HG00140_ch_T0001354:2;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20625277	20626899	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG00140_ch_T0001354;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001354;transcript_name=HG00140_ch_T0001354;gene_name=TTTY10;ID=intron:HG00140_ch_T0001354:2;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20626900	20627009	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG00140_ch_T0001354;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001354;transcript_name=HG00140_ch_T0001354;gene_name=TTTY10;ID=exon:HG00140_ch_T0001354:3;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20627010	20664361	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG00140_ch_T0001354;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001354;transcript_name=HG00140_ch_T0001354;gene_name=TTTY10;ID=intron:HG00140_ch_T0001354:3;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20664362	20664466	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG00140_ch_T0001354;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001354;transcript_name=HG00140_ch_T0001354;gene_name=TTTY10;ID=exon:HG00140_ch_T0001354:4;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20664467	20675280	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG00140_ch_T0001354;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001354;transcript_name=HG00140_ch_T0001354;gene_name=TTTY10;ID=intron:HG00140_ch_T0001354:4;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20675281	20675339	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG00140_ch_T0001354;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001354;transcript_name=HG00140_ch_T0001354;gene_name=TTTY10;ID=exon:HG00140_ch_T0001354:5;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20675340	20675897	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG00140_ch_T0001354;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001354;transcript_name=HG00140_ch_T0001354;gene_name=TTTY10;ID=intron:HG00140_ch_T0001354:5;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20675898	20676010	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG00140_ch_T0001354;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001354;transcript_name=HG00140_ch_T0001354;gene_name=TTTY10;ID=exon:HG00140_ch_T0001354:6;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20676011	20678141	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG00140_ch_T0001354;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001354;transcript_name=HG00140_ch_T0001354;gene_name=TTTY10;ID=intron:HG00140_ch_T0001354:6;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20678142	20678310	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG00140_ch_T0001354;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001354;transcript_name=HG00140_ch_T0001354;gene_name=TTTY10;ID=exon:HG00140_ch_T0001354:7;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20678311	20681277	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG00140_ch_T0001354;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001354;transcript_name=HG00140_ch_T0001354;gene_name=TTTY10;ID=intron:HG00140_ch_T0001354:7;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20681278	20681450	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG00140_ch_T0001354;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001354;transcript_name=HG00140_ch_T0001354;gene_name=TTTY10;ID=exon:HG00140_ch_T0001354:8;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20681451	20722078	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG00140_ch_T0001354;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001354;transcript_name=HG00140_ch_T0001354;gene_name=TTTY10;ID=intron:HG00140_ch_T0001354:8;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20722079	20722202	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG00140_ch_T0001354;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001354;transcript_name=HG00140_ch_T0001354;gene_name=TTTY10;ID=exon:HG00140_ch_T0001354:9;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20722203	20732116	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG00140_ch_T0001354;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001354;transcript_name=HG00140_ch_T0001354;gene_name=TTTY10;ID=intron:HG00140_ch_T0001354:9;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20732117	20732373	.	-	.	source_transcript=ENST00000662223.1;source_transcript_name=TTTY10-209;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000662223.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662223.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000662223.1,ENST00000662223.1;transcript_id=HG00140_ch_T0001354;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001354;transcript_name=HG00140_ch_T0001354;gene_name=TTTY10;ID=exon:HG00140_ch_T0001354:10;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	20622392	20732267	1000	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=HG00140_ch_T0001355;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_G0000421;transcript_name=HG00140_ch_T0001355;gene_name=TTTY10;ID=HG00140_ch_T0001355;Name=TTTY10
HG00140_chrY	CAT	exon	20622392	20622850	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=HG00140_ch_T0001355;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001355;transcript_name=HG00140_ch_T0001355;gene_name=TTTY10;ID=exon:HG00140_ch_T0001355:0;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20622851	20623455	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=HG00140_ch_T0001355;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001355;transcript_name=HG00140_ch_T0001355;gene_name=TTTY10;ID=intron:HG00140_ch_T0001355:0;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20623456	20623695	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=HG00140_ch_T0001355;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001355;transcript_name=HG00140_ch_T0001355;gene_name=TTTY10;ID=exon:HG00140_ch_T0001355:1;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20623696	20625216	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=HG00140_ch_T0001355;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001355;transcript_name=HG00140_ch_T0001355;gene_name=TTTY10;ID=intron:HG00140_ch_T0001355:1;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20625217	20625276	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=HG00140_ch_T0001355;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001355;transcript_name=HG00140_ch_T0001355;gene_name=TTTY10;ID=exon:HG00140_ch_T0001355:2;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20625277	20664361	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=HG00140_ch_T0001355;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001355;transcript_name=HG00140_ch_T0001355;gene_name=TTTY10;ID=intron:HG00140_ch_T0001355:2;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20664362	20664466	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=HG00140_ch_T0001355;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001355;transcript_name=HG00140_ch_T0001355;gene_name=TTTY10;ID=exon:HG00140_ch_T0001355:3;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20664467	20678141	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=HG00140_ch_T0001355;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001355;transcript_name=HG00140_ch_T0001355;gene_name=TTTY10;ID=intron:HG00140_ch_T0001355:3;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20678142	20678310	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=HG00140_ch_T0001355;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001355;transcript_name=HG00140_ch_T0001355;gene_name=TTTY10;ID=exon:HG00140_ch_T0001355:4;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20678311	20681277	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=HG00140_ch_T0001355;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001355;transcript_name=HG00140_ch_T0001355;gene_name=TTTY10;ID=intron:HG00140_ch_T0001355:4;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20681278	20681450	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=HG00140_ch_T0001355;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001355;transcript_name=HG00140_ch_T0001355;gene_name=TTTY10;ID=exon:HG00140_ch_T0001355:5;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20681451	20732116	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=HG00140_ch_T0001355;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001355;transcript_name=HG00140_ch_T0001355;gene_name=TTTY10;ID=intron:HG00140_ch_T0001355:5;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20732117	20732267	.	-	.	source_transcript=ENST00000658891.1;source_transcript_name=TTTY10-205;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000658891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000658891.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000658891.1,ENST00000658891.1;transcript_id=HG00140_ch_T0001355;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001355;transcript_name=HG00140_ch_T0001355;gene_name=TTTY10;ID=exon:HG00140_ch_T0001355:6;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	20622696	20676238	1000	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=HG00140_ch_T0001356;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_G0000421;transcript_name=HG00140_ch_T0001356;gene_name=TTTY10;ID=HG00140_ch_T0001356;Name=TTTY10
HG00140_chrY	CAT	exon	20622696	20622850	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=HG00140_ch_T0001356;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001356;transcript_name=HG00140_ch_T0001356;gene_name=TTTY10;ID=exon:HG00140_ch_T0001356:0;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20622851	20623455	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=HG00140_ch_T0001356;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001356;transcript_name=HG00140_ch_T0001356;gene_name=TTTY10;ID=intron:HG00140_ch_T0001356:0;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20623456	20623695	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=HG00140_ch_T0001356;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001356;transcript_name=HG00140_ch_T0001356;gene_name=TTTY10;ID=exon:HG00140_ch_T0001356:1;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20623696	20625216	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=HG00140_ch_T0001356;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001356;transcript_name=HG00140_ch_T0001356;gene_name=TTTY10;ID=intron:HG00140_ch_T0001356:1;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20625217	20625276	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=HG00140_ch_T0001356;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001356;transcript_name=HG00140_ch_T0001356;gene_name=TTTY10;ID=exon:HG00140_ch_T0001356:2;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20625277	20626899	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=HG00140_ch_T0001356;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001356;transcript_name=HG00140_ch_T0001356;gene_name=TTTY10;ID=intron:HG00140_ch_T0001356:2;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20626900	20627009	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=HG00140_ch_T0001356;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001356;transcript_name=HG00140_ch_T0001356;gene_name=TTTY10;ID=exon:HG00140_ch_T0001356:3;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20627010	20664361	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=HG00140_ch_T0001356;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001356;transcript_name=HG00140_ch_T0001356;gene_name=TTTY10;ID=intron:HG00140_ch_T0001356:3;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20664362	20664466	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=HG00140_ch_T0001356;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001356;transcript_name=HG00140_ch_T0001356;gene_name=TTTY10;ID=exon:HG00140_ch_T0001356:4;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20664467	20675280	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=HG00140_ch_T0001356;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001356;transcript_name=HG00140_ch_T0001356;gene_name=TTTY10;ID=intron:HG00140_ch_T0001356:4;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20675281	20676238	.	-	.	source_transcript=ENST00000455084.1;source_transcript_name=TTTY10-201;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000455084.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455084.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000455084.1,ENST00000455084.1;transcript_id=HG00140_ch_T0001356;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001356;transcript_name=HG00140_ch_T0001356;gene_name=TTTY10;ID=exon:HG00140_ch_T0001356:5;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	20623203	20732502	1000	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG00140_ch_T0001357;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_G0000421;transcript_name=HG00140_ch_T0001357;gene_name=TTTY10;ID=HG00140_ch_T0001357;Name=TTTY10
HG00140_chrY	CAT	exon	20623203	20623695	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG00140_ch_T0001357;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001357;transcript_name=HG00140_ch_T0001357;gene_name=TTTY10;ID=exon:HG00140_ch_T0001357:0;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20623696	20625216	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG00140_ch_T0001357;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001357;transcript_name=HG00140_ch_T0001357;gene_name=TTTY10;ID=intron:HG00140_ch_T0001357:0;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20625217	20625276	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG00140_ch_T0001357;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001357;transcript_name=HG00140_ch_T0001357;gene_name=TTTY10;ID=exon:HG00140_ch_T0001357:1;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20625277	20626899	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG00140_ch_T0001357;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001357;transcript_name=HG00140_ch_T0001357;gene_name=TTTY10;ID=intron:HG00140_ch_T0001357:1;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20626900	20627009	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG00140_ch_T0001357;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001357;transcript_name=HG00140_ch_T0001357;gene_name=TTTY10;ID=exon:HG00140_ch_T0001357:2;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20627010	20664361	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG00140_ch_T0001357;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001357;transcript_name=HG00140_ch_T0001357;gene_name=TTTY10;ID=intron:HG00140_ch_T0001357:2;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20664362	20664466	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG00140_ch_T0001357;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001357;transcript_name=HG00140_ch_T0001357;gene_name=TTTY10;ID=exon:HG00140_ch_T0001357:3;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20664467	20675280	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG00140_ch_T0001357;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001357;transcript_name=HG00140_ch_T0001357;gene_name=TTTY10;ID=intron:HG00140_ch_T0001357:3;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20675281	20675339	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG00140_ch_T0001357;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001357;transcript_name=HG00140_ch_T0001357;gene_name=TTTY10;ID=exon:HG00140_ch_T0001357:4;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20675340	20675897	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG00140_ch_T0001357;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001357;transcript_name=HG00140_ch_T0001357;gene_name=TTTY10;ID=intron:HG00140_ch_T0001357:4;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20675898	20676010	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG00140_ch_T0001357;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001357;transcript_name=HG00140_ch_T0001357;gene_name=TTTY10;ID=exon:HG00140_ch_T0001357:5;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20676011	20678141	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG00140_ch_T0001357;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001357;transcript_name=HG00140_ch_T0001357;gene_name=TTTY10;ID=intron:HG00140_ch_T0001357:5;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20678142	20678310	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG00140_ch_T0001357;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001357;transcript_name=HG00140_ch_T0001357;gene_name=TTTY10;ID=exon:HG00140_ch_T0001357:6;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20678311	20681277	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG00140_ch_T0001357;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001357;transcript_name=HG00140_ch_T0001357;gene_name=TTTY10;ID=intron:HG00140_ch_T0001357:6;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20681278	20681450	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG00140_ch_T0001357;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001357;transcript_name=HG00140_ch_T0001357;gene_name=TTTY10;ID=exon:HG00140_ch_T0001357:7;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20681451	20732116	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG00140_ch_T0001357;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001357;transcript_name=HG00140_ch_T0001357;gene_name=TTTY10;ID=intron:HG00140_ch_T0001357:7;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20732117	20732502	.	-	.	source_transcript=ENST00000651837.1;source_transcript_name=TTTY10-202;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651837.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651837.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000651837.1,ENST00000651837.1;transcript_id=HG00140_ch_T0001357;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001357;transcript_name=HG00140_ch_T0001357;gene_name=TTTY10;ID=exon:HG00140_ch_T0001357:8;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	20623520	20628172	1000	-	.	source_transcript=ENST00000654569.1;source_transcript_name=TTTY10-203;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000654569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000654569.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000654569.1,ENST00000654569.1;transcript_id=HG00140_ch_T0001358;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_G0000421;transcript_name=HG00140_ch_T0001358;gene_name=TTTY10;ID=HG00140_ch_T0001358;Name=TTTY10
HG00140_chrY	CAT	exon	20623520	20623695	.	-	.	source_transcript=ENST00000654569.1;source_transcript_name=TTTY10-203;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000654569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000654569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000654569.1,ENST00000654569.1;transcript_id=HG00140_ch_T0001358;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001358;transcript_name=HG00140_ch_T0001358;gene_name=TTTY10;ID=exon:HG00140_ch_T0001358:0;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20623696	20625216	.	-	.	source_transcript=ENST00000654569.1;source_transcript_name=TTTY10-203;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000654569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000654569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000654569.1,ENST00000654569.1;transcript_id=HG00140_ch_T0001358;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001358;transcript_name=HG00140_ch_T0001358;gene_name=TTTY10;ID=intron:HG00140_ch_T0001358:0;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20625217	20625276	.	-	.	source_transcript=ENST00000654569.1;source_transcript_name=TTTY10-203;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000654569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000654569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000654569.1,ENST00000654569.1;transcript_id=HG00140_ch_T0001358;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001358;transcript_name=HG00140_ch_T0001358;gene_name=TTTY10;ID=exon:HG00140_ch_T0001358:1;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20625277	20626899	.	-	.	source_transcript=ENST00000654569.1;source_transcript_name=TTTY10-203;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000654569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000654569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000654569.1,ENST00000654569.1;transcript_id=HG00140_ch_T0001358;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001358;transcript_name=HG00140_ch_T0001358;gene_name=TTTY10;ID=intron:HG00140_ch_T0001358:1;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20626900	20627009	.	-	.	source_transcript=ENST00000654569.1;source_transcript_name=TTTY10-203;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000654569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000654569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000654569.1,ENST00000654569.1;transcript_id=HG00140_ch_T0001358;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001358;transcript_name=HG00140_ch_T0001358;gene_name=TTTY10;ID=exon:HG00140_ch_T0001358:2;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20627010	20627788	.	-	.	source_transcript=ENST00000654569.1;source_transcript_name=TTTY10-203;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000654569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000654569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000654569.1,ENST00000654569.1;transcript_id=HG00140_ch_T0001358;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001358;transcript_name=HG00140_ch_T0001358;gene_name=TTTY10;ID=intron:HG00140_ch_T0001358:2;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20627789	20628172	.	-	.	source_transcript=ENST00000654569.1;source_transcript_name=TTTY10-203;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000654569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000654569.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000654569.1,ENST00000654569.1;transcript_id=HG00140_ch_T0001358;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001358;transcript_name=HG00140_ch_T0001358;gene_name=TTTY10;ID=exon:HG00140_ch_T0001358:3;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	20660219	20732342	1000	-	.	source_transcript=ENST00000667496.1;source_transcript_name=TTTY10-212;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667496.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667496.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000667496.1,ENST00000667496.1;transcript_id=HG00140_ch_T0001359;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_G0000421;transcript_name=HG00140_ch_T0001359;gene_name=TTTY10;ID=HG00140_ch_T0001359;Name=TTTY10
HG00140_chrY	CAT	exon	20660219	20664466	.	-	.	source_transcript=ENST00000667496.1;source_transcript_name=TTTY10-212;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667496.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667496.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000667496.1,ENST00000667496.1;transcript_id=HG00140_ch_T0001359;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001359;transcript_name=HG00140_ch_T0001359;gene_name=TTTY10;ID=exon:HG00140_ch_T0001359:0;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20664467	20732116	.	-	.	source_transcript=ENST00000667496.1;source_transcript_name=TTTY10-212;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667496.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667496.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000667496.1,ENST00000667496.1;transcript_id=HG00140_ch_T0001359;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001359;transcript_name=HG00140_ch_T0001359;gene_name=TTTY10;ID=intron:HG00140_ch_T0001359:0;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20732117	20732342	.	-	.	source_transcript=ENST00000667496.1;source_transcript_name=TTTY10-212;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000667496.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000667496.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000667496.1,ENST00000667496.1;transcript_id=HG00140_ch_T0001359;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001359;transcript_name=HG00140_ch_T0001359;gene_name=TTTY10;ID=exon:HG00140_ch_T0001359:1;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	20661486	20675866	1000	-	.	source_transcript=ENST00000659275.1;source_transcript_name=TTTY10-206;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000659275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000659275.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000659275.1,ENST00000659275.1;transcript_id=HG00140_ch_T0001360;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_G0000421;transcript_name=HG00140_ch_T0001360;gene_name=TTTY10;ID=HG00140_ch_T0001360;Name=TTTY10
HG00140_chrY	CAT	exon	20661486	20664466	.	-	.	source_transcript=ENST00000659275.1;source_transcript_name=TTTY10-206;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000659275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000659275.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000659275.1,ENST00000659275.1;transcript_id=HG00140_ch_T0001360;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001360;transcript_name=HG00140_ch_T0001360;gene_name=TTTY10;ID=exon:HG00140_ch_T0001360:0;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20664467	20675280	.	-	.	source_transcript=ENST00000659275.1;source_transcript_name=TTTY10-206;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000659275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000659275.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000659275.1,ENST00000659275.1;transcript_id=HG00140_ch_T0001360;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001360;transcript_name=HG00140_ch_T0001360;gene_name=TTTY10;ID=intron:HG00140_ch_T0001360:0;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20675281	20675866	.	-	.	source_transcript=ENST00000659275.1;source_transcript_name=TTTY10-206;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000659275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000659275.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000659275.1,ENST00000659275.1;transcript_id=HG00140_ch_T0001360;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001360;transcript_name=HG00140_ch_T0001360;gene_name=TTTY10;ID=exon:HG00140_ch_T0001360:1;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	20663777	20732156	1000	-	.	source_transcript=ENST00000755216.1;source_transcript_name=TTTY10-214;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755216.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755216.1,ENST00000755216.1;transcript_id=HG00140_ch_T0001361;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_G0000421;transcript_name=HG00140_ch_T0001361;gene_name=TTTY10;ID=HG00140_ch_T0001361;Name=TTTY10
HG00140_chrY	CAT	exon	20663777	20664466	.	-	.	source_transcript=ENST00000755216.1;source_transcript_name=TTTY10-214;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755216.1,ENST00000755216.1;transcript_id=HG00140_ch_T0001361;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001361;transcript_name=HG00140_ch_T0001361;gene_name=TTTY10;ID=exon:HG00140_ch_T0001361:0;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20664467	20676045	.	-	.	source_transcript=ENST00000755216.1;source_transcript_name=TTTY10-214;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755216.1,ENST00000755216.1;transcript_id=HG00140_ch_T0001361;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001361;transcript_name=HG00140_ch_T0001361;gene_name=TTTY10;ID=intron:HG00140_ch_T0001361:0;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20676046	20676243	.	-	.	source_transcript=ENST00000755216.1;source_transcript_name=TTTY10-214;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755216.1,ENST00000755216.1;transcript_id=HG00140_ch_T0001361;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001361;transcript_name=HG00140_ch_T0001361;gene_name=TTTY10;ID=exon:HG00140_ch_T0001361:1;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20676244	20678141	.	-	.	source_transcript=ENST00000755216.1;source_transcript_name=TTTY10-214;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755216.1,ENST00000755216.1;transcript_id=HG00140_ch_T0001361;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001361;transcript_name=HG00140_ch_T0001361;gene_name=TTTY10;ID=intron:HG00140_ch_T0001361:1;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20678142	20678310	.	-	.	source_transcript=ENST00000755216.1;source_transcript_name=TTTY10-214;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755216.1,ENST00000755216.1;transcript_id=HG00140_ch_T0001361;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001361;transcript_name=HG00140_ch_T0001361;gene_name=TTTY10;ID=exon:HG00140_ch_T0001361:2;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20678311	20681277	.	-	.	source_transcript=ENST00000755216.1;source_transcript_name=TTTY10-214;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755216.1,ENST00000755216.1;transcript_id=HG00140_ch_T0001361;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001361;transcript_name=HG00140_ch_T0001361;gene_name=TTTY10;ID=intron:HG00140_ch_T0001361:2;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20681278	20681450	.	-	.	source_transcript=ENST00000755216.1;source_transcript_name=TTTY10-214;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755216.1,ENST00000755216.1;transcript_id=HG00140_ch_T0001361;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001361;transcript_name=HG00140_ch_T0001361;gene_name=TTTY10;ID=exon:HG00140_ch_T0001361:3;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20681451	20732116	.	-	.	source_transcript=ENST00000755216.1;source_transcript_name=TTTY10-214;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755216.1,ENST00000755216.1;transcript_id=HG00140_ch_T0001361;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001361;transcript_name=HG00140_ch_T0001361;gene_name=TTTY10;ID=intron:HG00140_ch_T0001361:3;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20732117	20732156	.	-	.	source_transcript=ENST00000755216.1;source_transcript_name=TTTY10-214;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755216.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755216.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755216.1,ENST00000755216.1;transcript_id=HG00140_ch_T0001361;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001361;transcript_name=HG00140_ch_T0001361;gene_name=TTTY10;ID=exon:HG00140_ch_T0001361:4;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	20663779	20732530	1000	-	.	source_transcript=ENST00000666666.1;source_transcript_name=TTTY10-210;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000666666.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666666.1,ENST00000666666.1;transcript_id=HG00140_ch_T0001362;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_G0000421;transcript_name=HG00140_ch_T0001362;gene_name=TTTY10;ID=HG00140_ch_T0001362;Name=TTTY10
HG00140_chrY	CAT	exon	20663779	20664466	.	-	.	source_transcript=ENST00000666666.1;source_transcript_name=TTTY10-210;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000666666.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666666.1,ENST00000666666.1;transcript_id=HG00140_ch_T0001362;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001362;transcript_name=HG00140_ch_T0001362;gene_name=TTTY10;ID=exon:HG00140_ch_T0001362:0;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20664467	20676045	.	-	.	source_transcript=ENST00000666666.1;source_transcript_name=TTTY10-210;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000666666.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666666.1,ENST00000666666.1;transcript_id=HG00140_ch_T0001362;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001362;transcript_name=HG00140_ch_T0001362;gene_name=TTTY10;ID=intron:HG00140_ch_T0001362:0;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20676046	20676243	.	-	.	source_transcript=ENST00000666666.1;source_transcript_name=TTTY10-210;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000666666.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666666.1,ENST00000666666.1;transcript_id=HG00140_ch_T0001362;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001362;transcript_name=HG00140_ch_T0001362;gene_name=TTTY10;ID=exon:HG00140_ch_T0001362:1;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20676244	20678141	.	-	.	source_transcript=ENST00000666666.1;source_transcript_name=TTTY10-210;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000666666.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666666.1,ENST00000666666.1;transcript_id=HG00140_ch_T0001362;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001362;transcript_name=HG00140_ch_T0001362;gene_name=TTTY10;ID=intron:HG00140_ch_T0001362:1;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20678142	20678310	.	-	.	source_transcript=ENST00000666666.1;source_transcript_name=TTTY10-210;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000666666.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666666.1,ENST00000666666.1;transcript_id=HG00140_ch_T0001362;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001362;transcript_name=HG00140_ch_T0001362;gene_name=TTTY10;ID=exon:HG00140_ch_T0001362:2;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20678311	20732116	.	-	.	source_transcript=ENST00000666666.1;source_transcript_name=TTTY10-210;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000666666.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666666.1,ENST00000666666.1;transcript_id=HG00140_ch_T0001362;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001362;transcript_name=HG00140_ch_T0001362;gene_name=TTTY10;ID=intron:HG00140_ch_T0001362:2;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20732117	20732530	.	-	.	source_transcript=ENST00000666666.1;source_transcript_name=TTTY10-210;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000666666.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000666666.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000666666.1,ENST00000666666.1;transcript_id=HG00140_ch_T0001362;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001362;transcript_name=HG00140_ch_T0001362;gene_name=TTTY10;ID=exon:HG00140_ch_T0001362:3;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	20664092	20732156	1000	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=HG00140_ch_T0001363;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_G0000421;transcript_name=HG00140_ch_T0001363;gene_name=TTTY10;ID=HG00140_ch_T0001363;Name=TTTY10
HG00140_chrY	CAT	exon	20664092	20664466	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=HG00140_ch_T0001363;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001363;transcript_name=HG00140_ch_T0001363;gene_name=TTTY10;ID=exon:HG00140_ch_T0001363:0;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20664467	20675280	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=HG00140_ch_T0001363;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001363;transcript_name=HG00140_ch_T0001363;gene_name=TTTY10;ID=intron:HG00140_ch_T0001363:0;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20675281	20675339	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=HG00140_ch_T0001363;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001363;transcript_name=HG00140_ch_T0001363;gene_name=TTTY10;ID=exon:HG00140_ch_T0001363:1;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20675340	20675897	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=HG00140_ch_T0001363;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001363;transcript_name=HG00140_ch_T0001363;gene_name=TTTY10;ID=intron:HG00140_ch_T0001363:1;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20675898	20676010	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=HG00140_ch_T0001363;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001363;transcript_name=HG00140_ch_T0001363;gene_name=TTTY10;ID=exon:HG00140_ch_T0001363:2;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20676011	20678141	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=HG00140_ch_T0001363;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001363;transcript_name=HG00140_ch_T0001363;gene_name=TTTY10;ID=intron:HG00140_ch_T0001363:2;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20678142	20678310	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=HG00140_ch_T0001363;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001363;transcript_name=HG00140_ch_T0001363;gene_name=TTTY10;ID=exon:HG00140_ch_T0001363:3;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20678311	20681277	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=HG00140_ch_T0001363;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001363;transcript_name=HG00140_ch_T0001363;gene_name=TTTY10;ID=intron:HG00140_ch_T0001363:3;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20681278	20681450	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=HG00140_ch_T0001363;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001363;transcript_name=HG00140_ch_T0001363;gene_name=TTTY10;ID=exon:HG00140_ch_T0001363:4;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20681451	20684204	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=HG00140_ch_T0001363;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001363;transcript_name=HG00140_ch_T0001363;gene_name=TTTY10;ID=intron:HG00140_ch_T0001363:4;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20684205	20684296	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=HG00140_ch_T0001363;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001363;transcript_name=HG00140_ch_T0001363;gene_name=TTTY10;ID=exon:HG00140_ch_T0001363:5;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20684297	20732116	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=HG00140_ch_T0001363;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001363;transcript_name=HG00140_ch_T0001363;gene_name=TTTY10;ID=intron:HG00140_ch_T0001363:5;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20732117	20732156	.	-	.	source_transcript=ENST00000755217.1;source_transcript_name=TTTY10-215;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755217.1,ENST00000755217.1;transcript_id=HG00140_ch_T0001363;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001363;transcript_name=HG00140_ch_T0001363;gene_name=TTTY10;ID=exon:HG00140_ch_T0001363:6;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	20676120	20732494	1000	-	.	source_transcript=ENST00000755218.1;source_transcript_name=TTTY10-216;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755218.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755218.1,ENST00000755218.1;transcript_id=HG00140_ch_T0001364;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_G0000421;transcript_name=HG00140_ch_T0001364;gene_name=TTTY10;ID=HG00140_ch_T0001364;Name=TTTY10
HG00140_chrY	CAT	exon	20676120	20676243	.	-	.	source_transcript=ENST00000755218.1;source_transcript_name=TTTY10-216;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755218.1,ENST00000755218.1;transcript_id=HG00140_ch_T0001364;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001364;transcript_name=HG00140_ch_T0001364;gene_name=TTTY10;ID=exon:HG00140_ch_T0001364:0;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20676244	20678141	.	-	.	source_transcript=ENST00000755218.1;source_transcript_name=TTTY10-216;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755218.1,ENST00000755218.1;transcript_id=HG00140_ch_T0001364;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001364;transcript_name=HG00140_ch_T0001364;gene_name=TTTY10;ID=intron:HG00140_ch_T0001364:0;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20678142	20678310	.	-	.	source_transcript=ENST00000755218.1;source_transcript_name=TTTY10-216;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755218.1,ENST00000755218.1;transcript_id=HG00140_ch_T0001364;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001364;transcript_name=HG00140_ch_T0001364;gene_name=TTTY10;ID=exon:HG00140_ch_T0001364:1;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20678311	20681277	.	-	.	source_transcript=ENST00000755218.1;source_transcript_name=TTTY10-216;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755218.1,ENST00000755218.1;transcript_id=HG00140_ch_T0001364;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001364;transcript_name=HG00140_ch_T0001364;gene_name=TTTY10;ID=intron:HG00140_ch_T0001364:1;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20681278	20681450	.	-	.	source_transcript=ENST00000755218.1;source_transcript_name=TTTY10-216;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755218.1,ENST00000755218.1;transcript_id=HG00140_ch_T0001364;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001364;transcript_name=HG00140_ch_T0001364;gene_name=TTTY10;ID=exon:HG00140_ch_T0001364:2;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20681451	20684204	.	-	.	source_transcript=ENST00000755218.1;source_transcript_name=TTTY10-216;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755218.1,ENST00000755218.1;transcript_id=HG00140_ch_T0001364;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001364;transcript_name=HG00140_ch_T0001364;gene_name=TTTY10;ID=intron:HG00140_ch_T0001364:2;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20684205	20684296	.	-	.	source_transcript=ENST00000755218.1;source_transcript_name=TTTY10-216;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755218.1,ENST00000755218.1;transcript_id=HG00140_ch_T0001364;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001364;transcript_name=HG00140_ch_T0001364;gene_name=TTTY10;ID=exon:HG00140_ch_T0001364:3;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20684297	20732116	.	-	.	source_transcript=ENST00000755218.1;source_transcript_name=TTTY10-216;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755218.1,ENST00000755218.1;transcript_id=HG00140_ch_T0001364;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001364;transcript_name=HG00140_ch_T0001364;gene_name=TTTY10;ID=intron:HG00140_ch_T0001364:3;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20732117	20732494	.	-	.	source_transcript=ENST00000755218.1;source_transcript_name=TTTY10-216;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755218.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755218.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755218.1,ENST00000755218.1;transcript_id=HG00140_ch_T0001364;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001364;transcript_name=HG00140_ch_T0001364;gene_name=TTTY10;ID=exon:HG00140_ch_T0001364:4;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	20677722	20732508	1000	-	.	source_transcript=ENST00000755219.1;source_transcript_name=TTTY10-217;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755219.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755219.1,ENST00000755219.1;transcript_id=HG00140_ch_T0001365;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_G0000421;transcript_name=HG00140_ch_T0001365;gene_name=TTTY10;ID=HG00140_ch_T0001365;Name=TTTY10
HG00140_chrY	CAT	exon	20677722	20678310	.	-	.	source_transcript=ENST00000755219.1;source_transcript_name=TTTY10-217;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755219.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755219.1,ENST00000755219.1;transcript_id=HG00140_ch_T0001365;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001365;transcript_name=HG00140_ch_T0001365;gene_name=TTTY10;ID=exon:HG00140_ch_T0001365:0;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20678311	20681277	.	-	.	source_transcript=ENST00000755219.1;source_transcript_name=TTTY10-217;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755219.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755219.1,ENST00000755219.1;transcript_id=HG00140_ch_T0001365;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001365;transcript_name=HG00140_ch_T0001365;gene_name=TTTY10;ID=intron:HG00140_ch_T0001365:0;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20681278	20681450	.	-	.	source_transcript=ENST00000755219.1;source_transcript_name=TTTY10-217;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755219.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755219.1,ENST00000755219.1;transcript_id=HG00140_ch_T0001365;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001365;transcript_name=HG00140_ch_T0001365;gene_name=TTTY10;ID=exon:HG00140_ch_T0001365:1;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20681451	20732116	.	-	.	source_transcript=ENST00000755219.1;source_transcript_name=TTTY10-217;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755219.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755219.1,ENST00000755219.1;transcript_id=HG00140_ch_T0001365;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001365;transcript_name=HG00140_ch_T0001365;gene_name=TTTY10;ID=intron:HG00140_ch_T0001365:1;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20732117	20732508	.	-	.	source_transcript=ENST00000755219.1;source_transcript_name=TTTY10-217;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755219.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755219.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755219.1,ENST00000755219.1;transcript_id=HG00140_ch_T0001365;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001365;transcript_name=HG00140_ch_T0001365;gene_name=TTTY10;ID=exon:HG00140_ch_T0001365:2;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	20731943	20732494	1000	-	.	source_transcript=ENST00000755220.1;source_transcript_name=TTTY10-218;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755220.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755220.1,ENST00000755220.1;transcript_id=HG00140_ch_T0001367;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_G0000421;transcript_name=HG00140_ch_T0001367;gene_name=TTTY10;ID=HG00140_ch_T0001367;Name=TTTY10
HG00140_chrY	CAT	exon	20731943	20732494	.	-	.	source_transcript=ENST00000755220.1;source_transcript_name=TTTY10-218;source_gene=ENSG00000229236.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000229236.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000755220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000755220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=ENST00000755220.1,ENST00000755220.1;transcript_id=HG00140_ch_T0001367;gene_id=HG00140_ch_G0000421;Parent=HG00140_ch_T0001367;transcript_name=HG00140_ch_T0001367;gene_name=TTTY10;ID=exon:HG00140_ch_T0001367:0;Name=TTTY10;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	20727233	20727530	.	-	.	source_gene_common_name=KDM5DP1;source_gene=ENSG00000277438.1;alternative_source_transcripts=ENST00000622542.1,ENST00000622542.1;gene_id=HG00140_ch_G0000422;gene_biotype=processed_pseudogene;gene_name=KDM5DP1;gene_sources=liftoff;ID=HG00140_ch_G0000422;Name=KDM5DP1
HG00140_chrY	CAT	transcript	20727233	20727530	1000	-	.	source_transcript=ENST00000622542.1;source_transcript_name=KDM5DP1-201;source_gene=ENSG00000277438.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000277438.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000622542.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000622542.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5DP1;alternative_source_transcripts=ENST00000622542.1,ENST00000622542.1;transcript_id=HG00140_ch_T0001366;gene_id=HG00140_ch_G0000422;Parent=HG00140_ch_G0000422;transcript_name=HG00140_ch_T0001366;gene_name=KDM5DP1;ID=HG00140_ch_T0001366;Name=KDM5DP1
HG00140_chrY	CAT	exon	20727233	20727530	.	-	.	source_transcript=ENST00000622542.1;source_transcript_name=KDM5DP1-201;source_gene=ENSG00000277438.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000277438.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000622542.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000622542.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5DP1;alternative_source_transcripts=ENST00000622542.1,ENST00000622542.1;transcript_id=HG00140_ch_T0001366;gene_id=HG00140_ch_G0000422;Parent=HG00140_ch_T0001366;transcript_name=HG00140_ch_T0001366;gene_name=KDM5DP1;ID=exon:HG00140_ch_T0001366:0;Name=KDM5DP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	20732787	20750166	.	+	.	source_gene_common_name=EIF1AY;source_gene=ENSG00000198692.10;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;gene_id=HG00140_ch_G0000423;gene_biotype=protein_coding;gene_name=EIF1AY;gene_sources=liftoff;ID=HG00140_ch_G0000423;Name=EIF1AY
HG00140_chrY	CAT	transcript	20732787	20750166	100	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG00140_ch_T0001368;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_G0000423;transcript_name=HG00140_ch_T0001368;gene_name=EIF1AY;ID=HG00140_ch_T0001368;Name=EIF1AY
HG00140_chrY	CAT	exon	20732787	20732898	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG00140_ch_T0001368;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001368;transcript_name=HG00140_ch_T0001368;gene_name=EIF1AY;ID=exon:HG00140_ch_T0001368:0;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	20732883	20732898	.	+	0	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG00140_ch_T0001368;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001368;transcript_name=HG00140_ch_T0001368;gene_name=EIF1AY;ID=CDS:HG00140_ch_T0001368:0;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	20732883	20732885	.	+	0	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG00140_ch_T0001368;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001368;transcript_name=HG00140_ch_T0001368;gene_name=EIF1AY;ID=start_codon:HG00140_ch_T0001368;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20732899	20736618	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG00140_ch_T0001368;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001368;transcript_name=HG00140_ch_T0001368;gene_name=EIF1AY;ID=intron:HG00140_ch_T0001368:0;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20736619	20736702	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG00140_ch_T0001368;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001368;transcript_name=HG00140_ch_T0001368;gene_name=EIF1AY;ID=exon:HG00140_ch_T0001368:1;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	20736619	20736702	.	+	2	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG00140_ch_T0001368;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001368;transcript_name=HG00140_ch_T0001368;gene_name=EIF1AY;ID=CDS:HG00140_ch_T0001368:1;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20736703	20739600	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG00140_ch_T0001368;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001368;transcript_name=HG00140_ch_T0001368;gene_name=EIF1AY;ID=intron:HG00140_ch_T0001368:1;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20739601	20739704	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG00140_ch_T0001368;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001368;transcript_name=HG00140_ch_T0001368;gene_name=EIF1AY;ID=exon:HG00140_ch_T0001368:2;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	20739601	20739704	.	+	2	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG00140_ch_T0001368;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001368;transcript_name=HG00140_ch_T0001368;gene_name=EIF1AY;ID=CDS:HG00140_ch_T0001368:2;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20739705	20741485	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG00140_ch_T0001368;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001368;transcript_name=HG00140_ch_T0001368;gene_name=EIF1AY;ID=intron:HG00140_ch_T0001368:2;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20741486	20741536	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG00140_ch_T0001368;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001368;transcript_name=HG00140_ch_T0001368;gene_name=EIF1AY;ID=exon:HG00140_ch_T0001368:3;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	20741486	20741536	.	+	0	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG00140_ch_T0001368;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001368;transcript_name=HG00140_ch_T0001368;gene_name=EIF1AY;ID=CDS:HG00140_ch_T0001368:3;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20741537	20745035	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG00140_ch_T0001368;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001368;transcript_name=HG00140_ch_T0001368;gene_name=EIF1AY;ID=intron:HG00140_ch_T0001368:3;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20745036	20745117	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG00140_ch_T0001368;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001368;transcript_name=HG00140_ch_T0001368;gene_name=EIF1AY;ID=exon:HG00140_ch_T0001368:4;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	20745036	20745117	.	+	0	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG00140_ch_T0001368;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001368;transcript_name=HG00140_ch_T0001368;gene_name=EIF1AY;ID=CDS:HG00140_ch_T0001368:4;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20745118	20746495	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG00140_ch_T0001368;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001368;transcript_name=HG00140_ch_T0001368;gene_name=EIF1AY;ID=intron:HG00140_ch_T0001368:4;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20746496	20746587	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG00140_ch_T0001368;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001368;transcript_name=HG00140_ch_T0001368;gene_name=EIF1AY;ID=exon:HG00140_ch_T0001368:5;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	20746496	20746587	.	+	2	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG00140_ch_T0001368;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001368;transcript_name=HG00140_ch_T0001368;gene_name=EIF1AY;ID=CDS:HG00140_ch_T0001368:5;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20746588	20749352	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG00140_ch_T0001368;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001368;transcript_name=HG00140_ch_T0001368;gene_name=EIF1AY;ID=intron:HG00140_ch_T0001368:5;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20749353	20750166	.	+	.	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG00140_ch_T0001368;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001368;transcript_name=HG00140_ch_T0001368;gene_name=EIF1AY;ID=exon:HG00140_ch_T0001368:6;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	20749353	20749358	.	+	0	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG00140_ch_T0001368;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001368;transcript_name=HG00140_ch_T0001368;gene_name=EIF1AY;ID=CDS:HG00140_ch_T0001368:6;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	20749356	20749358	.	+	0	source_transcript=ENST00000361365.7;source_transcript_name=EIF1AY-201;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000361365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000361365.7,ENST00000361365.7;transcript_id=HG00140_ch_T0001368;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001368;transcript_name=HG00140_ch_T0001368;gene_name=EIF1AY;ID=stop_codon:HG00140_ch_T0001368;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	20732789	20745541	1000	+	.	source_transcript=ENST00000465253.1;source_transcript_name=EIF1AY-204;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000465253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000465253.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000465253.1,ENST00000465253.1;transcript_id=HG00140_ch_T0001369;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_G0000423;transcript_name=HG00140_ch_T0001369;gene_name=EIF1AY;ID=HG00140_ch_T0001369;Name=EIF1AY
HG00140_chrY	CAT	exon	20732789	20732898	.	+	.	source_transcript=ENST00000465253.1;source_transcript_name=EIF1AY-204;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000465253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000465253.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000465253.1,ENST00000465253.1;transcript_id=HG00140_ch_T0001369;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001369;transcript_name=HG00140_ch_T0001369;gene_name=EIF1AY;ID=exon:HG00140_ch_T0001369:0;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20732899	20736618	.	+	.	source_transcript=ENST00000465253.1;source_transcript_name=EIF1AY-204;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000465253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000465253.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000465253.1,ENST00000465253.1;transcript_id=HG00140_ch_T0001369;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001369;transcript_name=HG00140_ch_T0001369;gene_name=EIF1AY;ID=intron:HG00140_ch_T0001369:0;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20736619	20736702	.	+	.	source_transcript=ENST00000465253.1;source_transcript_name=EIF1AY-204;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000465253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000465253.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000465253.1,ENST00000465253.1;transcript_id=HG00140_ch_T0001369;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001369;transcript_name=HG00140_ch_T0001369;gene_name=EIF1AY;ID=exon:HG00140_ch_T0001369:1;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20736703	20739600	.	+	.	source_transcript=ENST00000465253.1;source_transcript_name=EIF1AY-204;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000465253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000465253.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000465253.1,ENST00000465253.1;transcript_id=HG00140_ch_T0001369;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001369;transcript_name=HG00140_ch_T0001369;gene_name=EIF1AY;ID=intron:HG00140_ch_T0001369:1;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20739601	20739704	.	+	.	source_transcript=ENST00000465253.1;source_transcript_name=EIF1AY-204;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000465253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000465253.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000465253.1,ENST00000465253.1;transcript_id=HG00140_ch_T0001369;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001369;transcript_name=HG00140_ch_T0001369;gene_name=EIF1AY;ID=exon:HG00140_ch_T0001369:2;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20739705	20741485	.	+	.	source_transcript=ENST00000465253.1;source_transcript_name=EIF1AY-204;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000465253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000465253.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000465253.1,ENST00000465253.1;transcript_id=HG00140_ch_T0001369;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001369;transcript_name=HG00140_ch_T0001369;gene_name=EIF1AY;ID=intron:HG00140_ch_T0001369:2;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20741486	20741536	.	+	.	source_transcript=ENST00000465253.1;source_transcript_name=EIF1AY-204;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000465253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000465253.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000465253.1,ENST00000465253.1;transcript_id=HG00140_ch_T0001369;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001369;transcript_name=HG00140_ch_T0001369;gene_name=EIF1AY;ID=exon:HG00140_ch_T0001369:3;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20741537	20745035	.	+	.	source_transcript=ENST00000465253.1;source_transcript_name=EIF1AY-204;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000465253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000465253.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000465253.1,ENST00000465253.1;transcript_id=HG00140_ch_T0001369;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001369;transcript_name=HG00140_ch_T0001369;gene_name=EIF1AY;ID=intron:HG00140_ch_T0001369:3;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20745036	20745541	.	+	.	source_transcript=ENST00000465253.1;source_transcript_name=EIF1AY-204;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000465253.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000465253.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000465253.1,ENST00000465253.1;transcript_id=HG00140_ch_T0001369;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001369;transcript_name=HG00140_ch_T0001369;gene_name=EIF1AY;ID=exon:HG00140_ch_T0001369:4;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	20732805	20749642	100	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG00140_ch_T0001370;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_G0000423;transcript_name=HG00140_ch_T0001370;gene_name=EIF1AY;ID=HG00140_ch_T0001370;Name=EIF1AY
HG00140_chrY	CAT	exon	20732805	20732898	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG00140_ch_T0001370;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001370;transcript_name=HG00140_ch_T0001370;gene_name=EIF1AY;ID=exon:HG00140_ch_T0001370:0;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	20732883	20732898	.	+	0	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG00140_ch_T0001370;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001370;transcript_name=HG00140_ch_T0001370;gene_name=EIF1AY;ID=CDS:HG00140_ch_T0001370:0;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	20732883	20732885	.	+	0	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG00140_ch_T0001370;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001370;transcript_name=HG00140_ch_T0001370;gene_name=EIF1AY;ID=start_codon:HG00140_ch_T0001370;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20732899	20736618	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG00140_ch_T0001370;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001370;transcript_name=HG00140_ch_T0001370;gene_name=EIF1AY;ID=intron:HG00140_ch_T0001370:0;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20736619	20736702	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG00140_ch_T0001370;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001370;transcript_name=HG00140_ch_T0001370;gene_name=EIF1AY;ID=exon:HG00140_ch_T0001370:1;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	20736619	20736702	.	+	2	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG00140_ch_T0001370;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001370;transcript_name=HG00140_ch_T0001370;gene_name=EIF1AY;ID=CDS:HG00140_ch_T0001370:1;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20736703	20739600	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG00140_ch_T0001370;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001370;transcript_name=HG00140_ch_T0001370;gene_name=EIF1AY;ID=intron:HG00140_ch_T0001370:1;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20739601	20739704	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG00140_ch_T0001370;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001370;transcript_name=HG00140_ch_T0001370;gene_name=EIF1AY;ID=exon:HG00140_ch_T0001370:2;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	20739601	20739704	.	+	2	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG00140_ch_T0001370;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001370;transcript_name=HG00140_ch_T0001370;gene_name=EIF1AY;ID=CDS:HG00140_ch_T0001370:2;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20739705	20745035	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG00140_ch_T0001370;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001370;transcript_name=HG00140_ch_T0001370;gene_name=EIF1AY;ID=intron:HG00140_ch_T0001370:2;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20745036	20745117	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG00140_ch_T0001370;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001370;transcript_name=HG00140_ch_T0001370;gene_name=EIF1AY;ID=exon:HG00140_ch_T0001370:3;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	20745036	20745117	.	+	0	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG00140_ch_T0001370;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001370;transcript_name=HG00140_ch_T0001370;gene_name=EIF1AY;ID=CDS:HG00140_ch_T0001370:3;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20745118	20746495	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG00140_ch_T0001370;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001370;transcript_name=HG00140_ch_T0001370;gene_name=EIF1AY;ID=intron:HG00140_ch_T0001370:3;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20746496	20746587	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG00140_ch_T0001370;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001370;transcript_name=HG00140_ch_T0001370;gene_name=EIF1AY;ID=exon:HG00140_ch_T0001370:4;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	20746496	20746587	.	+	2	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG00140_ch_T0001370;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001370;transcript_name=HG00140_ch_T0001370;gene_name=EIF1AY;ID=CDS:HG00140_ch_T0001370:4;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20746588	20749352	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG00140_ch_T0001370;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001370;transcript_name=HG00140_ch_T0001370;gene_name=EIF1AY;ID=intron:HG00140_ch_T0001370:4;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20749353	20749642	.	+	.	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG00140_ch_T0001370;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001370;transcript_name=HG00140_ch_T0001370;gene_name=EIF1AY;ID=exon:HG00140_ch_T0001370:5;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	20749353	20749358	.	+	0	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG00140_ch_T0001370;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001370;transcript_name=HG00140_ch_T0001370;gene_name=EIF1AY;ID=CDS:HG00140_ch_T0001370:5;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	20749356	20749358	.	+	0	source_transcript=ENST00000382772.3;source_transcript_name=EIF1AY-202;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382772.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000382772.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000382772.3,ENST00000382772.3;transcript_id=HG00140_ch_T0001370;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001370;transcript_name=HG00140_ch_T0001370;gene_name=EIF1AY;ID=stop_codon:HG00140_ch_T0001370;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	20743730	20749642	1000	+	.	source_transcript=ENST00000464196.5;source_transcript_name=EIF1AY-203;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000464196.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000464196.5;transcript_score=299.93600000000004;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000464196.5,ENST00000464196.5;transcript_id=HG00140_ch_T0001371;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_G0000423;transcript_name=HG00140_ch_T0001371;gene_name=EIF1AY;ID=HG00140_ch_T0001371;Name=EIF1AY
HG00140_chrY	CAT	exon	20743730	20746587	.	+	.	source_transcript=ENST00000464196.5;source_transcript_name=EIF1AY-203;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000464196.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000464196.5;transcript_score=299.93600000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000464196.5,ENST00000464196.5;transcript_id=HG00140_ch_T0001371;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001371;transcript_name=HG00140_ch_T0001371;gene_name=EIF1AY;ID=exon:HG00140_ch_T0001371:0;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20746588	20749352	.	+	.	source_transcript=ENST00000464196.5;source_transcript_name=EIF1AY-203;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000464196.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000464196.5;transcript_score=299.93600000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000464196.5,ENST00000464196.5;transcript_id=HG00140_ch_T0001371;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001371;transcript_name=HG00140_ch_T0001371;gene_name=EIF1AY;ID=intron:HG00140_ch_T0001371:0;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20749353	20749642	.	+	.	source_transcript=ENST00000464196.5;source_transcript_name=EIF1AY-203;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000464196.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000464196.5;transcript_score=299.93600000000004;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000464196.5,ENST00000464196.5;transcript_id=HG00140_ch_T0001371;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001371;transcript_name=HG00140_ch_T0001371;gene_name=EIF1AY;ID=exon:HG00140_ch_T0001371:1;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	20744859	20749642	1000	+	.	source_transcript=ENST00000485584.1;source_transcript_name=EIF1AY-205;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000485584.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000485584.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000485584.1,ENST00000485584.1;transcript_id=HG00140_ch_T0001372;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_G0000423;transcript_name=HG00140_ch_T0001372;gene_name=EIF1AY;ID=HG00140_ch_T0001372;Name=EIF1AY
HG00140_chrY	CAT	exon	20744859	20745117	.	+	.	source_transcript=ENST00000485584.1;source_transcript_name=EIF1AY-205;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000485584.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000485584.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000485584.1,ENST00000485584.1;transcript_id=HG00140_ch_T0001372;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001372;transcript_name=HG00140_ch_T0001372;gene_name=EIF1AY;ID=exon:HG00140_ch_T0001372:0;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20745118	20746495	.	+	.	source_transcript=ENST00000485584.1;source_transcript_name=EIF1AY-205;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000485584.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000485584.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000485584.1,ENST00000485584.1;transcript_id=HG00140_ch_T0001372;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001372;transcript_name=HG00140_ch_T0001372;gene_name=EIF1AY;ID=intron:HG00140_ch_T0001372:0;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20746496	20746587	.	+	.	source_transcript=ENST00000485584.1;source_transcript_name=EIF1AY-205;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000485584.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000485584.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000485584.1,ENST00000485584.1;transcript_id=HG00140_ch_T0001372;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001372;transcript_name=HG00140_ch_T0001372;gene_name=EIF1AY;ID=exon:HG00140_ch_T0001372:1;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20746588	20749352	.	+	.	source_transcript=ENST00000485584.1;source_transcript_name=EIF1AY-205;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000485584.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000485584.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000485584.1,ENST00000485584.1;transcript_id=HG00140_ch_T0001372;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001372;transcript_name=HG00140_ch_T0001372;gene_name=EIF1AY;ID=intron:HG00140_ch_T0001372:1;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20749353	20749642	.	+	.	source_transcript=ENST00000485584.1;source_transcript_name=EIF1AY-205;source_gene=ENSG00000198692.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000198692.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000485584.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000485584.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=ENST00000485584.1,ENST00000485584.1;transcript_id=HG00140_ch_T0001372;gene_id=HG00140_ch_G0000423;Parent=HG00140_ch_T0001372;transcript_name=HG00140_ch_T0001372;gene_name=EIF1AY;ID=exon:HG00140_ch_T0001372:2;Name=EIF1AY;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	20882354	20891545	.	-	.	source_gene_common_name=ENSG00000286247;source_gene=ENSG00000286247.2;alternative_source_transcripts=ENST00000651369.1,ENST00000651369.1;gene_id=HG00140_ch_G0000424;gene_biotype=lncRNA;gene_name=ENSG00000286247;gene_sources=liftoff;ID=HG00140_ch_G0000424;Name=ENSG00000286247
HG00140_chrY	CAT	transcript	20882354	20891545	1000	-	.	source_transcript=ENST00000651369.1;source_transcript_name=ENST00000651369;source_gene=ENSG00000286247.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286247.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651369.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651369.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286247;alternative_source_transcripts=ENST00000651369.1,ENST00000651369.1;transcript_id=HG00140_ch_T0001373;gene_id=HG00140_ch_G0000424;Parent=HG00140_ch_G0000424;transcript_name=HG00140_ch_T0001373;gene_name=ENSG00000286247;ID=HG00140_ch_T0001373;Name=ENSG00000286247
HG00140_chrY	CAT	exon	20882354	20883120	.	-	.	source_transcript=ENST00000651369.1;source_transcript_name=ENST00000651369;source_gene=ENSG00000286247.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286247.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651369.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651369.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286247;alternative_source_transcripts=ENST00000651369.1,ENST00000651369.1;transcript_id=HG00140_ch_T0001373;gene_id=HG00140_ch_G0000424;Parent=HG00140_ch_T0001373;transcript_name=HG00140_ch_T0001373;gene_name=ENSG00000286247;ID=exon:HG00140_ch_T0001373:0;Name=ENSG00000286247;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20883121	20891487	.	-	.	source_transcript=ENST00000651369.1;source_transcript_name=ENST00000651369;source_gene=ENSG00000286247.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286247.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651369.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651369.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286247;alternative_source_transcripts=ENST00000651369.1,ENST00000651369.1;transcript_id=HG00140_ch_T0001373;gene_id=HG00140_ch_G0000424;Parent=HG00140_ch_T0001373;transcript_name=HG00140_ch_T0001373;gene_name=ENSG00000286247;ID=intron:HG00140_ch_T0001373:0;Name=ENSG00000286247;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20891488	20891545	.	-	.	source_transcript=ENST00000651369.1;source_transcript_name=ENST00000651369;source_gene=ENSG00000286247.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286247.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651369.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000651369.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286247;alternative_source_transcripts=ENST00000651369.1,ENST00000651369.1;transcript_id=HG00140_ch_T0001373;gene_id=HG00140_ch_G0000424;Parent=HG00140_ch_T0001373;transcript_name=HG00140_ch_T0001373;gene_name=ENSG00000286247;ID=exon:HG00140_ch_T0001373:1;Name=ENSG00000286247;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	20882825	20884303	1000	-	.	source_transcript=ENST00000840781.1;source_transcript_name=ENST00000840781;source_gene=ENSG00000286247.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286247.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840781.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286247;alternative_source_transcripts=ENST00000840781.1,ENST00000840781.1;transcript_id=HG00140_ch_T0001374;gene_id=HG00140_ch_G0000424;Parent=HG00140_ch_G0000424;transcript_name=HG00140_ch_T0001374;gene_name=ENSG00000286247;ID=HG00140_ch_T0001374;Name=ENSG00000286247
HG00140_chrY	CAT	exon	20882825	20883120	.	-	.	source_transcript=ENST00000840781.1;source_transcript_name=ENST00000840781;source_gene=ENSG00000286247.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286247.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840781.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286247;alternative_source_transcripts=ENST00000840781.1,ENST00000840781.1;transcript_id=HG00140_ch_T0001374;gene_id=HG00140_ch_G0000424;Parent=HG00140_ch_T0001374;transcript_name=HG00140_ch_T0001374;gene_name=ENSG00000286247;ID=exon:HG00140_ch_T0001374:0;Name=ENSG00000286247;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20883121	20884229	.	-	.	source_transcript=ENST00000840781.1;source_transcript_name=ENST00000840781;source_gene=ENSG00000286247.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286247.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840781.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286247;alternative_source_transcripts=ENST00000840781.1,ENST00000840781.1;transcript_id=HG00140_ch_T0001374;gene_id=HG00140_ch_G0000424;Parent=HG00140_ch_T0001374;transcript_name=HG00140_ch_T0001374;gene_name=ENSG00000286247;ID=intron:HG00140_ch_T0001374:0;Name=ENSG00000286247;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20884230	20884303	.	-	.	source_transcript=ENST00000840781.1;source_transcript_name=ENST00000840781;source_gene=ENSG00000286247.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286247.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000840781.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000840781.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286247;alternative_source_transcripts=ENST00000840781.1,ENST00000840781.1;transcript_id=HG00140_ch_T0001374;gene_id=HG00140_ch_G0000424;Parent=HG00140_ch_T0001374;transcript_name=HG00140_ch_T0001374;gene_name=ENSG00000286247;ID=exon:HG00140_ch_T0001374:1;Name=ENSG00000286247;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	20884277	20899919	.	+	.	source_gene_common_name=TBL1YP1;source_gene=ENSG00000225624.1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;gene_id=HG00140_ch_G0000425;gene_biotype=unprocessed_pseudogene;gene_name=TBL1YP1;gene_sources=liftoff;ID=HG00140_ch_G0000425;Name=TBL1YP1
HG00140_chrY	CAT	transcript	20884277	20899919	1000	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG00140_ch_T0001375;gene_id=HG00140_ch_G0000425;Parent=HG00140_ch_G0000425;transcript_name=HG00140_ch_T0001375;gene_name=TBL1YP1;ID=HG00140_ch_T0001375;Name=TBL1YP1
HG00140_chrY	CAT	exon	20884277	20884520	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG00140_ch_T0001375;gene_id=HG00140_ch_G0000425;Parent=HG00140_ch_T0001375;transcript_name=HG00140_ch_T0001375;gene_name=TBL1YP1;ID=exon:HG00140_ch_T0001375:0;Name=TBL1YP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20884521	20886423	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG00140_ch_T0001375;gene_id=HG00140_ch_G0000425;Parent=HG00140_ch_T0001375;transcript_name=HG00140_ch_T0001375;gene_name=TBL1YP1;ID=intron:HG00140_ch_T0001375:0;Name=TBL1YP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20886424	20886554	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG00140_ch_T0001375;gene_id=HG00140_ch_G0000425;Parent=HG00140_ch_T0001375;transcript_name=HG00140_ch_T0001375;gene_name=TBL1YP1;ID=exon:HG00140_ch_T0001375:1;Name=TBL1YP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20886555	20886945	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG00140_ch_T0001375;gene_id=HG00140_ch_G0000425;Parent=HG00140_ch_T0001375;transcript_name=HG00140_ch_T0001375;gene_name=TBL1YP1;ID=intron:HG00140_ch_T0001375:1;Name=TBL1YP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20886946	20887093	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG00140_ch_T0001375;gene_id=HG00140_ch_G0000425;Parent=HG00140_ch_T0001375;transcript_name=HG00140_ch_T0001375;gene_name=TBL1YP1;ID=exon:HG00140_ch_T0001375:2;Name=TBL1YP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20887094	20887791	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG00140_ch_T0001375;gene_id=HG00140_ch_G0000425;Parent=HG00140_ch_T0001375;transcript_name=HG00140_ch_T0001375;gene_name=TBL1YP1;ID=intron:HG00140_ch_T0001375:2;Name=TBL1YP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20887792	20887855	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG00140_ch_T0001375;gene_id=HG00140_ch_G0000425;Parent=HG00140_ch_T0001375;transcript_name=HG00140_ch_T0001375;gene_name=TBL1YP1;ID=exon:HG00140_ch_T0001375:3;Name=TBL1YP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20887856	20887964	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG00140_ch_T0001375;gene_id=HG00140_ch_G0000425;Parent=HG00140_ch_T0001375;transcript_name=HG00140_ch_T0001375;gene_name=TBL1YP1;ID=intron:HG00140_ch_T0001375:3;Name=TBL1YP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20887965	20888063	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG00140_ch_T0001375;gene_id=HG00140_ch_G0000425;Parent=HG00140_ch_T0001375;transcript_name=HG00140_ch_T0001375;gene_name=TBL1YP1;ID=exon:HG00140_ch_T0001375:4;Name=TBL1YP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20888064	20891101	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG00140_ch_T0001375;gene_id=HG00140_ch_G0000425;Parent=HG00140_ch_T0001375;transcript_name=HG00140_ch_T0001375;gene_name=TBL1YP1;ID=intron:HG00140_ch_T0001375:4;Name=TBL1YP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20891102	20891169	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG00140_ch_T0001375;gene_id=HG00140_ch_G0000425;Parent=HG00140_ch_T0001375;transcript_name=HG00140_ch_T0001375;gene_name=TBL1YP1;ID=exon:HG00140_ch_T0001375:5;Name=TBL1YP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20891170	20897918	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG00140_ch_T0001375;gene_id=HG00140_ch_G0000425;Parent=HG00140_ch_T0001375;transcript_name=HG00140_ch_T0001375;gene_name=TBL1YP1;ID=intron:HG00140_ch_T0001375:5;Name=TBL1YP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20897919	20897992	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG00140_ch_T0001375;gene_id=HG00140_ch_G0000425;Parent=HG00140_ch_T0001375;transcript_name=HG00140_ch_T0001375;gene_name=TBL1YP1;ID=exon:HG00140_ch_T0001375:6;Name=TBL1YP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20897993	20898329	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG00140_ch_T0001375;gene_id=HG00140_ch_G0000425;Parent=HG00140_ch_T0001375;transcript_name=HG00140_ch_T0001375;gene_name=TBL1YP1;ID=intron:HG00140_ch_T0001375:6;Name=TBL1YP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20898330	20898454	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG00140_ch_T0001375;gene_id=HG00140_ch_G0000425;Parent=HG00140_ch_T0001375;transcript_name=HG00140_ch_T0001375;gene_name=TBL1YP1;ID=exon:HG00140_ch_T0001375:7;Name=TBL1YP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20898455	20899846	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG00140_ch_T0001375;gene_id=HG00140_ch_G0000425;Parent=HG00140_ch_T0001375;transcript_name=HG00140_ch_T0001375;gene_name=TBL1YP1;ID=intron:HG00140_ch_T0001375:7;Name=TBL1YP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20899847	20899919	.	+	.	source_transcript=ENST00000440297.1;source_transcript_name=TBL1YP1-201;source_gene=ENSG00000225624.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225624.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1YP1;alternative_source_transcripts=ENST00000440297.1,ENST00000440297.1;transcript_id=HG00140_ch_T0001375;gene_id=HG00140_ch_G0000425;Parent=HG00140_ch_T0001375;transcript_name=HG00140_ch_T0001375;gene_name=TBL1YP1;ID=exon:HG00140_ch_T0001375:8;Name=TBL1YP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	20913127	20938051	.	+	.	source_gene_common_name=RPS4Y2;source_gene=ENSG00000280969.2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;gene_id=HG00140_ch_G0000426;gene_biotype=protein_coding;gene_name=RPS4Y2;gene_sources=liftoff;ID=HG00140_ch_G0000426;Name=RPS4Y2
HG00140_chrY	CAT	transcript	20913127	20938051	100	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG00140_ch_T0001376;gene_id=HG00140_ch_G0000426;Parent=HG00140_ch_G0000426;transcript_name=HG00140_ch_T0001376;gene_name=RPS4Y2;ID=HG00140_ch_T0001376;Name=RPS4Y2
HG00140_chrY	CAT	exon	20913127	20913185	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG00140_ch_T0001376;gene_id=HG00140_ch_G0000426;Parent=HG00140_ch_T0001376;transcript_name=HG00140_ch_T0001376;gene_name=RPS4Y2;ID=exon:HG00140_ch_T0001376:0;Name=RPS4Y2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	20913183	20913185	.	+	0	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG00140_ch_T0001376;gene_id=HG00140_ch_G0000426;Parent=HG00140_ch_T0001376;transcript_name=HG00140_ch_T0001376;gene_name=RPS4Y2;ID=CDS:HG00140_ch_T0001376:0;Name=RPS4Y2;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	20913183	20913185	.	+	0	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG00140_ch_T0001376;gene_id=HG00140_ch_G0000426;Parent=HG00140_ch_T0001376;transcript_name=HG00140_ch_T0001376;gene_name=RPS4Y2;ID=start_codon:HG00140_ch_T0001376;Name=RPS4Y2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20913186	20913796	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG00140_ch_T0001376;gene_id=HG00140_ch_G0000426;Parent=HG00140_ch_T0001376;transcript_name=HG00140_ch_T0001376;gene_name=RPS4Y2;ID=intron:HG00140_ch_T0001376:0;Name=RPS4Y2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20913797	20913874	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG00140_ch_T0001376;gene_id=HG00140_ch_G0000426;Parent=HG00140_ch_T0001376;transcript_name=HG00140_ch_T0001376;gene_name=RPS4Y2;ID=exon:HG00140_ch_T0001376:1;Name=RPS4Y2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	20913797	20913874	.	+	0	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG00140_ch_T0001376;gene_id=HG00140_ch_G0000426;Parent=HG00140_ch_T0001376;transcript_name=HG00140_ch_T0001376;gene_name=RPS4Y2;ID=CDS:HG00140_ch_T0001376:1;Name=RPS4Y2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20913875	20916886	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG00140_ch_T0001376;gene_id=HG00140_ch_G0000426;Parent=HG00140_ch_T0001376;transcript_name=HG00140_ch_T0001376;gene_name=RPS4Y2;ID=intron:HG00140_ch_T0001376:1;Name=RPS4Y2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20916887	20917067	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG00140_ch_T0001376;gene_id=HG00140_ch_G0000426;Parent=HG00140_ch_T0001376;transcript_name=HG00140_ch_T0001376;gene_name=RPS4Y2;ID=exon:HG00140_ch_T0001376:2;Name=RPS4Y2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	20916887	20917067	.	+	0	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG00140_ch_T0001376;gene_id=HG00140_ch_G0000426;Parent=HG00140_ch_T0001376;transcript_name=HG00140_ch_T0001376;gene_name=RPS4Y2;ID=CDS:HG00140_ch_T0001376:2;Name=RPS4Y2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20917068	20918302	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG00140_ch_T0001376;gene_id=HG00140_ch_G0000426;Parent=HG00140_ch_T0001376;transcript_name=HG00140_ch_T0001376;gene_name=RPS4Y2;ID=intron:HG00140_ch_T0001376:2;Name=RPS4Y2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20918303	20918400	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG00140_ch_T0001376;gene_id=HG00140_ch_G0000426;Parent=HG00140_ch_T0001376;transcript_name=HG00140_ch_T0001376;gene_name=RPS4Y2;ID=exon:HG00140_ch_T0001376:3;Name=RPS4Y2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	20918303	20918400	.	+	2	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG00140_ch_T0001376;gene_id=HG00140_ch_G0000426;Parent=HG00140_ch_T0001376;transcript_name=HG00140_ch_T0001376;gene_name=RPS4Y2;ID=CDS:HG00140_ch_T0001376:3;Name=RPS4Y2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20918401	20925823	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG00140_ch_T0001376;gene_id=HG00140_ch_G0000426;Parent=HG00140_ch_T0001376;transcript_name=HG00140_ch_T0001376;gene_name=RPS4Y2;ID=intron:HG00140_ch_T0001376:3;Name=RPS4Y2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20925824	20925995	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG00140_ch_T0001376;gene_id=HG00140_ch_G0000426;Parent=HG00140_ch_T0001376;transcript_name=HG00140_ch_T0001376;gene_name=RPS4Y2;ID=exon:HG00140_ch_T0001376:4;Name=RPS4Y2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	20925824	20925995	.	+	0	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG00140_ch_T0001376;gene_id=HG00140_ch_G0000426;Parent=HG00140_ch_T0001376;transcript_name=HG00140_ch_T0001376;gene_name=RPS4Y2;ID=CDS:HG00140_ch_T0001376:4;Name=RPS4Y2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20925996	20936527	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG00140_ch_T0001376;gene_id=HG00140_ch_G0000426;Parent=HG00140_ch_T0001376;transcript_name=HG00140_ch_T0001376;gene_name=RPS4Y2;ID=intron:HG00140_ch_T0001376:4;Name=RPS4Y2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20936528	20936685	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG00140_ch_T0001376;gene_id=HG00140_ch_G0000426;Parent=HG00140_ch_T0001376;transcript_name=HG00140_ch_T0001376;gene_name=RPS4Y2;ID=exon:HG00140_ch_T0001376:5;Name=RPS4Y2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	20936528	20936685	.	+	2	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG00140_ch_T0001376;gene_id=HG00140_ch_G0000426;Parent=HG00140_ch_T0001376;transcript_name=HG00140_ch_T0001376;gene_name=RPS4Y2;ID=CDS:HG00140_ch_T0001376:5;Name=RPS4Y2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20936686	20937949	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG00140_ch_T0001376;gene_id=HG00140_ch_G0000426;Parent=HG00140_ch_T0001376;transcript_name=HG00140_ch_T0001376;gene_name=RPS4Y2;ID=intron:HG00140_ch_T0001376:5;Name=RPS4Y2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20937950	20938051	.	+	.	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG00140_ch_T0001376;gene_id=HG00140_ch_G0000426;Parent=HG00140_ch_T0001376;transcript_name=HG00140_ch_T0001376;gene_name=RPS4Y2;ID=exon:HG00140_ch_T0001376:6;Name=RPS4Y2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	20937950	20938051	.	+	0	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG00140_ch_T0001376;gene_id=HG00140_ch_G0000426;Parent=HG00140_ch_T0001376;transcript_name=HG00140_ch_T0001376;gene_name=RPS4Y2;ID=CDS:HG00140_ch_T0001376:6;Name=RPS4Y2;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	20938049	20938051	.	+	0	source_transcript=ENST00000629237.2;source_transcript_name=RPS4Y2-201;source_gene=ENSG00000280969.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000280969.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000629237.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000629237.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=ENST00000629237.2,ENST00000629237.2;transcript_id=HG00140_ch_T0001376;gene_id=HG00140_ch_G0000426;Parent=HG00140_ch_T0001376;transcript_name=HG00140_ch_T0001376;gene_name=RPS4Y2;ID=stop_codon:HG00140_ch_T0001376;Name=RPS4Y2;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	20965795	20968828	.	-	.	source_gene_common_name=HSFY4P;source_gene=ENSG00000224482.1;alternative_source_transcripts=ENST00000415994.1,ENST00000415994.1;gene_id=HG00140_ch_G0000427;gene_biotype=unprocessed_pseudogene;gene_name=HSFY4P;gene_sources=liftoff;ID=HG00140_ch_G0000427;Name=HSFY4P
HG00140_chrY	CAT	transcript	20965795	20968828	1000	-	.	source_transcript=ENST00000415994.1;source_transcript_name=HSFY4P-201;source_gene=ENSG00000224482.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224482.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415994.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY4P;alternative_source_transcripts=ENST00000415994.1,ENST00000415994.1;transcript_id=HG00140_ch_T0001377;gene_id=HG00140_ch_G0000427;Parent=HG00140_ch_G0000427;transcript_name=HG00140_ch_T0001377;gene_name=HSFY4P;ID=HG00140_ch_T0001377;Name=HSFY4P
HG00140_chrY	CAT	exon	20965795	20966484	.	-	.	source_transcript=ENST00000415994.1;source_transcript_name=HSFY4P-201;source_gene=ENSG00000224482.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224482.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415994.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY4P;alternative_source_transcripts=ENST00000415994.1,ENST00000415994.1;transcript_id=HG00140_ch_T0001377;gene_id=HG00140_ch_G0000427;Parent=HG00140_ch_T0001377;transcript_name=HG00140_ch_T0001377;gene_name=HSFY4P;ID=exon:HG00140_ch_T0001377:0;Name=HSFY4P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	20966485	20968337	.	-	.	source_transcript=ENST00000415994.1;source_transcript_name=HSFY4P-201;source_gene=ENSG00000224482.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224482.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415994.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY4P;alternative_source_transcripts=ENST00000415994.1,ENST00000415994.1;transcript_id=HG00140_ch_T0001377;gene_id=HG00140_ch_G0000427;Parent=HG00140_ch_T0001377;transcript_name=HG00140_ch_T0001377;gene_name=HSFY4P;ID=intron:HG00140_ch_T0001377:0;Name=HSFY4P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	20968338	20968828	.	-	.	source_transcript=ENST00000415994.1;source_transcript_name=HSFY4P-201;source_gene=ENSG00000224482.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224482.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415994.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY4P;alternative_source_transcripts=ENST00000415994.1,ENST00000415994.1;transcript_id=HG00140_ch_T0001377;gene_id=HG00140_ch_G0000427;Parent=HG00140_ch_T0001377;transcript_name=HG00140_ch_T0001377;gene_name=HSFY4P;ID=exon:HG00140_ch_T0001377:1;Name=HSFY4P;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	21000278	21000732	.	-	.	source_gene_common_name=ENSG00000216844;source_gene=ENSG00000216844.1;alternative_source_transcripts=ENST00000406090.1,ENST00000406090.1;gene_id=HG00140_ch_G0000428;gene_biotype=processed_pseudogene;gene_name=ENSG00000216844;gene_sources=liftoff;ID=HG00140_ch_G0000428;Name=ENSG00000216844
HG00140_chrY	CAT	transcript	21000278	21000732	1000	-	.	source_transcript=ENST00000406090.1;source_transcript_name=ENST00000406090;source_gene=ENSG00000216844.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000216844.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000406090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000406090.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000216844;alternative_source_transcripts=ENST00000406090.1,ENST00000406090.1;transcript_id=HG00140_ch_T0001378;gene_id=HG00140_ch_G0000428;Parent=HG00140_ch_G0000428;transcript_name=HG00140_ch_T0001378;gene_name=ENSG00000216844;ID=HG00140_ch_T0001378;Name=ENSG00000216844
HG00140_chrY	CAT	exon	21000278	21000732	.	-	.	source_transcript=ENST00000406090.1;source_transcript_name=ENST00000406090;source_gene=ENSG00000216844.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000216844.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000406090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000406090.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000216844;alternative_source_transcripts=ENST00000406090.1,ENST00000406090.1;transcript_id=HG00140_ch_T0001378;gene_id=HG00140_ch_G0000428;Parent=HG00140_ch_T0001378;transcript_name=HG00140_ch_T0001378;gene_name=ENSG00000216844;ID=exon:HG00140_ch_T0001378:0;Name=ENSG00000216844;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	21018359	21019359	.	+	.	source_gene_common_name=GAPDHP17;source_gene=ENSG00000229551.2;alternative_source_transcripts=ENST00000449858.2,ENST00000449858.2;gene_id=HG00140_ch_G0000429;gene_biotype=processed_pseudogene;gene_name=GAPDHP17;gene_sources=liftoff;ID=HG00140_ch_G0000429;Name=GAPDHP17
HG00140_chrY	CAT	transcript	21018359	21019359	1000	+	.	source_transcript=ENST00000449858.2;source_transcript_name=GAPDHP17-201;source_gene=ENSG00000229551.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229551.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000449858.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000449858.2;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GAPDHP17;alternative_source_transcripts=ENST00000449858.2,ENST00000449858.2;transcript_id=HG00140_ch_T0001379;gene_id=HG00140_ch_G0000429;Parent=HG00140_ch_G0000429;transcript_name=HG00140_ch_T0001379;gene_name=GAPDHP17;ID=HG00140_ch_T0001379;Name=GAPDHP17
HG00140_chrY	CAT	exon	21018359	21019359	.	+	.	source_transcript=ENST00000449858.2;source_transcript_name=GAPDHP17-201;source_gene=ENSG00000229551.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229551.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000449858.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000449858.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GAPDHP17;alternative_source_transcripts=ENST00000449858.2,ENST00000449858.2;transcript_id=HG00140_ch_T0001379;gene_id=HG00140_ch_G0000429;Parent=HG00140_ch_T0001379;transcript_name=HG00140_ch_T0001379;gene_name=GAPDHP17;ID=exon:HG00140_ch_T0001379:0;Name=GAPDHP17;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	21064366	21064584	.	-	.	source_gene_common_name=TMEM167AP1;source_gene=ENSG00000226504.1;alternative_source_transcripts=ENST00000423409.1,ENST00000423409.1;gene_id=HG00140_ch_G0000430;gene_biotype=processed_pseudogene;gene_name=TMEM167AP1;gene_sources=liftoff;ID=HG00140_ch_G0000430;Name=TMEM167AP1
HG00140_chrY	CAT	transcript	21064366	21064584	1000	-	.	source_transcript=ENST00000423409.1;source_transcript_name=TMEM167AP1-201;source_gene=ENSG00000226504.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226504.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000423409.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423409.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMEM167AP1;alternative_source_transcripts=ENST00000423409.1,ENST00000423409.1;transcript_id=HG00140_ch_T0001380;gene_id=HG00140_ch_G0000430;Parent=HG00140_ch_G0000430;transcript_name=HG00140_ch_T0001380;gene_name=TMEM167AP1;ID=HG00140_ch_T0001380;Name=TMEM167AP1
HG00140_chrY	CAT	exon	21064366	21064584	.	-	.	source_transcript=ENST00000423409.1;source_transcript_name=TMEM167AP1-201;source_gene=ENSG00000226504.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226504.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000423409.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423409.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMEM167AP1;alternative_source_transcripts=ENST00000423409.1,ENST00000423409.1;transcript_id=HG00140_ch_T0001380;gene_id=HG00140_ch_G0000430;Parent=HG00140_ch_T0001380;transcript_name=HG00140_ch_T0001380;gene_name=TMEM167AP1;ID=exon:HG00140_ch_T0001380:0;Name=TMEM167AP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	21187998	21194433	.	+	.	source_gene_common_name=ENSG00000254488;source_gene=ENSG00000254488.1;alternative_source_transcripts=ENST00000527562.1;gene_id=HG00140_ch_G0000431;gene_biotype=lncRNA;gene_name=ENSG00000254488;gene_sources=liftoff;ID=HG00140_ch_G0000431;Name=ENSG00000254488
HG00140_chrY	CAT	transcript	21187998	21194433	1000	+	.	source_transcript=ENST00000527562.1;source_transcript_name=ENST00000527562;source_gene=ENSG00000254488.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000254488.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000527562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000527562.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000254488;alternative_source_transcripts=ENST00000527562.1;transcript_id=HG00140_ch_T0001381;gene_id=HG00140_ch_G0000431;Parent=HG00140_ch_G0000431;transcript_name=HG00140_ch_T0001381;gene_name=ENSG00000254488;ID=HG00140_ch_T0001381;Name=ENSG00000254488
HG00140_chrY	CAT	exon	21187998	21188123	.	+	.	source_transcript=ENST00000527562.1;source_transcript_name=ENST00000527562;source_gene=ENSG00000254488.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000254488.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000527562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000527562.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000254488;alternative_source_transcripts=ENST00000527562.1;transcript_id=HG00140_ch_T0001381;gene_id=HG00140_ch_G0000431;Parent=HG00140_ch_T0001381;transcript_name=HG00140_ch_T0001381;gene_name=ENSG00000254488;ID=exon:HG00140_ch_T0001381:0;Name=ENSG00000254488;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21188124	21190352	.	+	.	source_transcript=ENST00000527562.1;source_transcript_name=ENST00000527562;source_gene=ENSG00000254488.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000254488.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000527562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000527562.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000254488;alternative_source_transcripts=ENST00000527562.1;transcript_id=HG00140_ch_T0001381;gene_id=HG00140_ch_G0000431;Parent=HG00140_ch_T0001381;transcript_name=HG00140_ch_T0001381;gene_name=ENSG00000254488;ID=intron:HG00140_ch_T0001381:0;Name=ENSG00000254488;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21190353	21190453	.	+	.	source_transcript=ENST00000527562.1;source_transcript_name=ENST00000527562;source_gene=ENSG00000254488.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000254488.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000527562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000527562.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000254488;alternative_source_transcripts=ENST00000527562.1;transcript_id=HG00140_ch_T0001381;gene_id=HG00140_ch_G0000431;Parent=HG00140_ch_T0001381;transcript_name=HG00140_ch_T0001381;gene_name=ENSG00000254488;ID=exon:HG00140_ch_T0001381:1;Name=ENSG00000254488;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21190454	21193677	.	+	.	source_transcript=ENST00000527562.1;source_transcript_name=ENST00000527562;source_gene=ENSG00000254488.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000254488.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000527562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000527562.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000254488;alternative_source_transcripts=ENST00000527562.1;transcript_id=HG00140_ch_T0001381;gene_id=HG00140_ch_G0000431;Parent=HG00140_ch_T0001381;transcript_name=HG00140_ch_T0001381;gene_name=ENSG00000254488;ID=intron:HG00140_ch_T0001381:1;Name=ENSG00000254488;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21193678	21194433	.	+	.	source_transcript=ENST00000527562.1;source_transcript_name=ENST00000527562;source_gene=ENSG00000254488.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000254488.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000527562.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000527562.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000254488;alternative_source_transcripts=ENST00000527562.1;transcript_id=HG00140_ch_T0001381;gene_id=HG00140_ch_G0000431;Parent=HG00140_ch_T0001381;transcript_name=HG00140_ch_T0001381;gene_name=ENSG00000254488;ID=exon:HG00140_ch_T0001381:2;Name=ENSG00000254488;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	21287909	21288220	.	+	.	source_gene_common_name=TOMM22P1;source_gene=ENSG00000237427.1;alternative_source_transcripts=ENST00000418578.1,ENST00000418578.1;gene_id=HG00140_ch_G0000432;gene_biotype=processed_pseudogene;gene_name=TOMM22P1;gene_sources=liftoff;ID=HG00140_ch_G0000432;Name=TOMM22P1
HG00140_chrY	CAT	transcript	21287909	21288220	1000	+	.	source_transcript=ENST00000418578.1;source_transcript_name=TOMM22P1-201;source_gene=ENSG00000237427.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237427.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000418578.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418578.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TOMM22P1;alternative_source_transcripts=ENST00000418578.1,ENST00000418578.1;transcript_id=HG00140_ch_T0001382;gene_id=HG00140_ch_G0000432;Parent=HG00140_ch_G0000432;transcript_name=HG00140_ch_T0001382;gene_name=TOMM22P1;ID=HG00140_ch_T0001382;Name=TOMM22P1
HG00140_chrY	CAT	exon	21287909	21288220	.	+	.	source_transcript=ENST00000418578.1;source_transcript_name=TOMM22P1-201;source_gene=ENSG00000237427.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000237427.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000418578.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418578.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TOMM22P1;alternative_source_transcripts=ENST00000418578.1,ENST00000418578.1;transcript_id=HG00140_ch_T0001382;gene_id=HG00140_ch_G0000432;Parent=HG00140_ch_T0001382;transcript_name=HG00140_ch_T0001382;gene_name=TOMM22P1;ID=exon:HG00140_ch_T0001382:0;Name=TOMM22P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	21292278	21294898	.	-	.	source_gene_common_name=ENSG00000297760;source_gene=ENSG00000297760.1;alternative_source_transcripts=ENST00000750840.1,ENST00000750840.1;gene_id=HG00140_ch_G0000433;gene_biotype=lncRNA;gene_name=ENSG00000297760;gene_sources=liftoff;ID=HG00140_ch_G0000433;Name=ENSG00000297760
HG00140_chrY	CAT	transcript	21292278	21294898	1000	-	.	source_transcript=ENST00000750840.1;source_transcript_name=ENST00000750840;source_gene=ENSG00000297760.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297760.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000750840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000750840.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297760;alternative_source_transcripts=ENST00000750840.1,ENST00000750840.1;transcript_id=HG00140_ch_T0001383;gene_id=HG00140_ch_G0000433;Parent=HG00140_ch_G0000433;transcript_name=HG00140_ch_T0001383;gene_name=ENSG00000297760;ID=HG00140_ch_T0001383;Name=ENSG00000297760
HG00140_chrY	CAT	exon	21292278	21293743	.	-	.	source_transcript=ENST00000750840.1;source_transcript_name=ENST00000750840;source_gene=ENSG00000297760.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297760.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000750840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000750840.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297760;alternative_source_transcripts=ENST00000750840.1,ENST00000750840.1;transcript_id=HG00140_ch_T0001383;gene_id=HG00140_ch_G0000433;Parent=HG00140_ch_T0001383;transcript_name=HG00140_ch_T0001383;gene_name=ENSG00000297760;ID=exon:HG00140_ch_T0001383:0;Name=ENSG00000297760;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21293744	21294791	.	-	.	source_transcript=ENST00000750840.1;source_transcript_name=ENST00000750840;source_gene=ENSG00000297760.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297760.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000750840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000750840.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297760;alternative_source_transcripts=ENST00000750840.1,ENST00000750840.1;transcript_id=HG00140_ch_T0001383;gene_id=HG00140_ch_G0000433;Parent=HG00140_ch_T0001383;transcript_name=HG00140_ch_T0001383;gene_name=ENSG00000297760;ID=intron:HG00140_ch_T0001383:0;Name=ENSG00000297760;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21294792	21294898	.	-	.	source_transcript=ENST00000750840.1;source_transcript_name=ENST00000750840;source_gene=ENSG00000297760.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297760.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000750840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000750840.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297760;alternative_source_transcripts=ENST00000750840.1,ENST00000750840.1;transcript_id=HG00140_ch_T0001383;gene_id=HG00140_ch_G0000433;Parent=HG00140_ch_T0001383;transcript_name=HG00140_ch_T0001383;gene_name=ENSG00000297760;ID=exon:HG00140_ch_T0001383:1;Name=ENSG00000297760;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	21295678	21414878	.	+	.	source_gene_common_name=ENSG00000289707;source_gene=ENSG00000289707.2;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;gene_id=HG00140_ch_G0000434;gene_biotype=lncRNA;gene_name=ENSG00000289707;gene_sources=liftoff;ID=HG00140_ch_G0000434;Name=ENSG00000289707
HG00140_chrY	CAT	transcript	21295678	21330645	1000	+	.	source_transcript=ENST00000696464.1;source_transcript_name=ENST00000696464;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696464.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;transcript_id=HG00140_ch_T0001384;gene_id=HG00140_ch_G0000434;Parent=HG00140_ch_G0000434;transcript_name=HG00140_ch_T0001384;gene_name=ENSG00000289707;ID=HG00140_ch_T0001384;Name=ENSG00000289707
HG00140_chrY	CAT	exon	21295678	21295913	.	+	.	source_transcript=ENST00000696464.1;source_transcript_name=ENST00000696464;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;transcript_id=HG00140_ch_T0001384;gene_id=HG00140_ch_G0000434;Parent=HG00140_ch_T0001384;transcript_name=HG00140_ch_T0001384;gene_name=ENSG00000289707;ID=exon:HG00140_ch_T0001384:0;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21295914	21305466	.	+	.	source_transcript=ENST00000696464.1;source_transcript_name=ENST00000696464;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;transcript_id=HG00140_ch_T0001384;gene_id=HG00140_ch_G0000434;Parent=HG00140_ch_T0001384;transcript_name=HG00140_ch_T0001384;gene_name=ENSG00000289707;ID=intron:HG00140_ch_T0001384:0;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21305467	21305561	.	+	.	source_transcript=ENST00000696464.1;source_transcript_name=ENST00000696464;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;transcript_id=HG00140_ch_T0001384;gene_id=HG00140_ch_G0000434;Parent=HG00140_ch_T0001384;transcript_name=HG00140_ch_T0001384;gene_name=ENSG00000289707;ID=exon:HG00140_ch_T0001384:1;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21305562	21308636	.	+	.	source_transcript=ENST00000696464.1;source_transcript_name=ENST00000696464;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;transcript_id=HG00140_ch_T0001384;gene_id=HG00140_ch_G0000434;Parent=HG00140_ch_T0001384;transcript_name=HG00140_ch_T0001384;gene_name=ENSG00000289707;ID=intron:HG00140_ch_T0001384:1;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21308637	21308690	.	+	.	source_transcript=ENST00000696464.1;source_transcript_name=ENST00000696464;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;transcript_id=HG00140_ch_T0001384;gene_id=HG00140_ch_G0000434;Parent=HG00140_ch_T0001384;transcript_name=HG00140_ch_T0001384;gene_name=ENSG00000289707;ID=exon:HG00140_ch_T0001384:2;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21308691	21309886	.	+	.	source_transcript=ENST00000696464.1;source_transcript_name=ENST00000696464;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;transcript_id=HG00140_ch_T0001384;gene_id=HG00140_ch_G0000434;Parent=HG00140_ch_T0001384;transcript_name=HG00140_ch_T0001384;gene_name=ENSG00000289707;ID=intron:HG00140_ch_T0001384:2;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21309887	21310021	.	+	.	source_transcript=ENST00000696464.1;source_transcript_name=ENST00000696464;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;transcript_id=HG00140_ch_T0001384;gene_id=HG00140_ch_G0000434;Parent=HG00140_ch_T0001384;transcript_name=HG00140_ch_T0001384;gene_name=ENSG00000289707;ID=exon:HG00140_ch_T0001384:3;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21310022	21327007	.	+	.	source_transcript=ENST00000696464.1;source_transcript_name=ENST00000696464;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;transcript_id=HG00140_ch_T0001384;gene_id=HG00140_ch_G0000434;Parent=HG00140_ch_T0001384;transcript_name=HG00140_ch_T0001384;gene_name=ENSG00000289707;ID=intron:HG00140_ch_T0001384:3;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21327008	21330645	.	+	.	source_transcript=ENST00000696464.1;source_transcript_name=ENST00000696464;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696464.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696464.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696464.1,ENST00000696464.1;transcript_id=HG00140_ch_T0001384;gene_id=HG00140_ch_G0000434;Parent=HG00140_ch_T0001384;transcript_name=HG00140_ch_T0001384;gene_name=ENSG00000289707;ID=exon:HG00140_ch_T0001384:4;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	21295678	21414878	1000	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG00140_ch_T0001385;gene_id=HG00140_ch_G0000434;Parent=HG00140_ch_G0000434;transcript_name=HG00140_ch_T0001385;gene_name=ENSG00000289707;ID=HG00140_ch_T0001385;Name=ENSG00000289707
HG00140_chrY	CAT	exon	21295678	21295913	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG00140_ch_T0001385;gene_id=HG00140_ch_G0000434;Parent=HG00140_ch_T0001385;transcript_name=HG00140_ch_T0001385;gene_name=ENSG00000289707;ID=exon:HG00140_ch_T0001385:0;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21295914	21305466	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG00140_ch_T0001385;gene_id=HG00140_ch_G0000434;Parent=HG00140_ch_T0001385;transcript_name=HG00140_ch_T0001385;gene_name=ENSG00000289707;ID=intron:HG00140_ch_T0001385:0;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21305467	21305561	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG00140_ch_T0001385;gene_id=HG00140_ch_G0000434;Parent=HG00140_ch_T0001385;transcript_name=HG00140_ch_T0001385;gene_name=ENSG00000289707;ID=exon:HG00140_ch_T0001385:1;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21305562	21308636	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG00140_ch_T0001385;gene_id=HG00140_ch_G0000434;Parent=HG00140_ch_T0001385;transcript_name=HG00140_ch_T0001385;gene_name=ENSG00000289707;ID=intron:HG00140_ch_T0001385:1;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21308637	21308690	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG00140_ch_T0001385;gene_id=HG00140_ch_G0000434;Parent=HG00140_ch_T0001385;transcript_name=HG00140_ch_T0001385;gene_name=ENSG00000289707;ID=exon:HG00140_ch_T0001385:2;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21308691	21309886	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG00140_ch_T0001385;gene_id=HG00140_ch_G0000434;Parent=HG00140_ch_T0001385;transcript_name=HG00140_ch_T0001385;gene_name=ENSG00000289707;ID=intron:HG00140_ch_T0001385:2;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21309887	21310021	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG00140_ch_T0001385;gene_id=HG00140_ch_G0000434;Parent=HG00140_ch_T0001385;transcript_name=HG00140_ch_T0001385;gene_name=ENSG00000289707;ID=exon:HG00140_ch_T0001385:3;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21310022	21354192	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG00140_ch_T0001385;gene_id=HG00140_ch_G0000434;Parent=HG00140_ch_T0001385;transcript_name=HG00140_ch_T0001385;gene_name=ENSG00000289707;ID=intron:HG00140_ch_T0001385:3;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21354193	21354256	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG00140_ch_T0001385;gene_id=HG00140_ch_G0000434;Parent=HG00140_ch_T0001385;transcript_name=HG00140_ch_T0001385;gene_name=ENSG00000289707;ID=exon:HG00140_ch_T0001385:4;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21354257	21385406	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG00140_ch_T0001385;gene_id=HG00140_ch_G0000434;Parent=HG00140_ch_T0001385;transcript_name=HG00140_ch_T0001385;gene_name=ENSG00000289707;ID=intron:HG00140_ch_T0001385:4;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21385407	21385514	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG00140_ch_T0001385;gene_id=HG00140_ch_G0000434;Parent=HG00140_ch_T0001385;transcript_name=HG00140_ch_T0001385;gene_name=ENSG00000289707;ID=exon:HG00140_ch_T0001385:5;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21385515	21407603	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG00140_ch_T0001385;gene_id=HG00140_ch_G0000434;Parent=HG00140_ch_T0001385;transcript_name=HG00140_ch_T0001385;gene_name=ENSG00000289707;ID=intron:HG00140_ch_T0001385:5;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21407604	21407762	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG00140_ch_T0001385;gene_id=HG00140_ch_G0000434;Parent=HG00140_ch_T0001385;transcript_name=HG00140_ch_T0001385;gene_name=ENSG00000289707;ID=exon:HG00140_ch_T0001385:6;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21407763	21410176	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG00140_ch_T0001385;gene_id=HG00140_ch_G0000434;Parent=HG00140_ch_T0001385;transcript_name=HG00140_ch_T0001385;gene_name=ENSG00000289707;ID=intron:HG00140_ch_T0001385:6;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21410177	21410247	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG00140_ch_T0001385;gene_id=HG00140_ch_G0000434;Parent=HG00140_ch_T0001385;transcript_name=HG00140_ch_T0001385;gene_name=ENSG00000289707;ID=exon:HG00140_ch_T0001385:7;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21410248	21412465	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG00140_ch_T0001385;gene_id=HG00140_ch_G0000434;Parent=HG00140_ch_T0001385;transcript_name=HG00140_ch_T0001385;gene_name=ENSG00000289707;ID=intron:HG00140_ch_T0001385:7;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21412466	21414878	.	+	.	source_transcript=ENST00000696465.1;source_transcript_name=ENST00000696465;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000696465.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000696465.1,ENST00000696465.1;transcript_id=HG00140_ch_T0001385;gene_id=HG00140_ch_G0000434;Parent=HG00140_ch_T0001385;transcript_name=HG00140_ch_T0001385;gene_name=ENSG00000289707;ID=exon:HG00140_ch_T0001385:8;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	21385192	21410247	1000	+	.	source_transcript=ENST00000813958.1;source_transcript_name=ENST00000813958;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000813958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000813958.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000813958.1,ENST00000813958.1;transcript_id=HG00140_ch_T0001387;gene_id=HG00140_ch_G0000434;Parent=HG00140_ch_G0000434;transcript_name=HG00140_ch_T0001387;gene_name=ENSG00000289707;ID=HG00140_ch_T0001387;Name=ENSG00000289707
HG00140_chrY	CAT	exon	21385192	21385229	.	+	.	source_transcript=ENST00000813958.1;source_transcript_name=ENST00000813958;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000813958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000813958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000813958.1,ENST00000813958.1;transcript_id=HG00140_ch_T0001387;gene_id=HG00140_ch_G0000434;Parent=HG00140_ch_T0001387;transcript_name=HG00140_ch_T0001387;gene_name=ENSG00000289707;ID=exon:HG00140_ch_T0001387:0;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21385230	21385406	.	+	.	source_transcript=ENST00000813958.1;source_transcript_name=ENST00000813958;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000813958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000813958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000813958.1,ENST00000813958.1;transcript_id=HG00140_ch_T0001387;gene_id=HG00140_ch_G0000434;Parent=HG00140_ch_T0001387;transcript_name=HG00140_ch_T0001387;gene_name=ENSG00000289707;ID=intron:HG00140_ch_T0001387:0;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21385407	21385514	.	+	.	source_transcript=ENST00000813958.1;source_transcript_name=ENST00000813958;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000813958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000813958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000813958.1,ENST00000813958.1;transcript_id=HG00140_ch_T0001387;gene_id=HG00140_ch_G0000434;Parent=HG00140_ch_T0001387;transcript_name=HG00140_ch_T0001387;gene_name=ENSG00000289707;ID=exon:HG00140_ch_T0001387:1;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21385515	21407603	.	+	.	source_transcript=ENST00000813958.1;source_transcript_name=ENST00000813958;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000813958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000813958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000813958.1,ENST00000813958.1;transcript_id=HG00140_ch_T0001387;gene_id=HG00140_ch_G0000434;Parent=HG00140_ch_T0001387;transcript_name=HG00140_ch_T0001387;gene_name=ENSG00000289707;ID=intron:HG00140_ch_T0001387:1;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21407604	21407762	.	+	.	source_transcript=ENST00000813958.1;source_transcript_name=ENST00000813958;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000813958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000813958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000813958.1,ENST00000813958.1;transcript_id=HG00140_ch_T0001387;gene_id=HG00140_ch_G0000434;Parent=HG00140_ch_T0001387;transcript_name=HG00140_ch_T0001387;gene_name=ENSG00000289707;ID=exon:HG00140_ch_T0001387:2;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21407763	21410176	.	+	.	source_transcript=ENST00000813958.1;source_transcript_name=ENST00000813958;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000813958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000813958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000813958.1,ENST00000813958.1;transcript_id=HG00140_ch_T0001387;gene_id=HG00140_ch_G0000434;Parent=HG00140_ch_T0001387;transcript_name=HG00140_ch_T0001387;gene_name=ENSG00000289707;ID=intron:HG00140_ch_T0001387:2;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21410177	21410247	.	+	.	source_transcript=ENST00000813958.1;source_transcript_name=ENST00000813958;source_gene=ENSG00000289707.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000289707.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000813958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000813958.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289707;alternative_source_transcripts=ENST00000813958.1,ENST00000813958.1;transcript_id=HG00140_ch_T0001387;gene_id=HG00140_ch_G0000434;Parent=HG00140_ch_T0001387;transcript_name=HG00140_ch_T0001387;gene_name=ENSG00000289707;ID=exon:HG00140_ch_T0001387:3;Name=ENSG00000289707;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	21378160	21379143	.	-	.	source_gene_common_name=NEFLP1;source_gene=ENSG00000232634.1;alternative_source_transcripts=ENST00000436364.1,ENST00000436364.1;gene_id=HG00140_ch_G0000435;gene_biotype=processed_pseudogene;gene_name=NEFLP1;gene_sources=liftoff;ID=HG00140_ch_G0000435;Name=NEFLP1
HG00140_chrY	CAT	transcript	21378160	21379143	1000	-	.	source_transcript=ENST00000436364.1;source_transcript_name=NEFLP1-201;source_gene=ENSG00000232634.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232634.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436364.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436364.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NEFLP1;alternative_source_transcripts=ENST00000436364.1,ENST00000436364.1;transcript_id=HG00140_ch_T0001386;gene_id=HG00140_ch_G0000435;Parent=HG00140_ch_G0000435;transcript_name=HG00140_ch_T0001386;gene_name=NEFLP1;ID=HG00140_ch_T0001386;Name=NEFLP1
HG00140_chrY	CAT	exon	21378160	21379143	.	-	.	source_transcript=ENST00000436364.1;source_transcript_name=NEFLP1-201;source_gene=ENSG00000232634.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232634.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436364.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436364.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NEFLP1;alternative_source_transcripts=ENST00000436364.1,ENST00000436364.1;transcript_id=HG00140_ch_T0001386;gene_id=HG00140_ch_G0000435;Parent=HG00140_ch_T0001386;transcript_name=HG00140_ch_T0001386;gene_name=NEFLP1;ID=exon:HG00140_ch_T0001386:0;Name=NEFLP1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	21468317	21475944	.	+	.	source_gene_common_name=ENSG00000226918;source_gene=ENSG00000226918.1;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;gene_id=HG00140_ch_G0000436;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000226918;gene_sources=liftoff;ID=HG00140_ch_G0000436;Name=ENSG00000226918
HG00140_chrY	CAT	transcript	21468317	21475944	1000	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG00140_ch_T0001388;gene_id=HG00140_ch_G0000436;Parent=HG00140_ch_G0000436;transcript_name=HG00140_ch_T0001388;gene_name=ENSG00000226918;ID=HG00140_ch_T0001388;Name=ENSG00000226918
HG00140_chrY	CAT	exon	21468317	21468425	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG00140_ch_T0001388;gene_id=HG00140_ch_G0000436;Parent=HG00140_ch_T0001388;transcript_name=HG00140_ch_T0001388;gene_name=ENSG00000226918;ID=exon:HG00140_ch_T0001388:0;Name=ENSG00000226918;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21468426	21468870	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG00140_ch_T0001388;gene_id=HG00140_ch_G0000436;Parent=HG00140_ch_T0001388;transcript_name=HG00140_ch_T0001388;gene_name=ENSG00000226918;ID=intron:HG00140_ch_T0001388:0;Name=ENSG00000226918;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21468871	21469049	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG00140_ch_T0001388;gene_id=HG00140_ch_G0000436;Parent=HG00140_ch_T0001388;transcript_name=HG00140_ch_T0001388;gene_name=ENSG00000226918;ID=exon:HG00140_ch_T0001388:1;Name=ENSG00000226918;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21469050	21471226	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG00140_ch_T0001388;gene_id=HG00140_ch_G0000436;Parent=HG00140_ch_T0001388;transcript_name=HG00140_ch_T0001388;gene_name=ENSG00000226918;ID=intron:HG00140_ch_T0001388:1;Name=ENSG00000226918;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21471227	21471344	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG00140_ch_T0001388;gene_id=HG00140_ch_G0000436;Parent=HG00140_ch_T0001388;transcript_name=HG00140_ch_T0001388;gene_name=ENSG00000226918;ID=exon:HG00140_ch_T0001388:2;Name=ENSG00000226918;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21471345	21471655	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG00140_ch_T0001388;gene_id=HG00140_ch_G0000436;Parent=HG00140_ch_T0001388;transcript_name=HG00140_ch_T0001388;gene_name=ENSG00000226918;ID=intron:HG00140_ch_T0001388:2;Name=ENSG00000226918;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21471656	21471686	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG00140_ch_T0001388;gene_id=HG00140_ch_G0000436;Parent=HG00140_ch_T0001388;transcript_name=HG00140_ch_T0001388;gene_name=ENSG00000226918;ID=exon:HG00140_ch_T0001388:3;Name=ENSG00000226918;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21471687	21473682	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG00140_ch_T0001388;gene_id=HG00140_ch_G0000436;Parent=HG00140_ch_T0001388;transcript_name=HG00140_ch_T0001388;gene_name=ENSG00000226918;ID=intron:HG00140_ch_T0001388:3;Name=ENSG00000226918;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21473683	21473797	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG00140_ch_T0001388;gene_id=HG00140_ch_G0000436;Parent=HG00140_ch_T0001388;transcript_name=HG00140_ch_T0001388;gene_name=ENSG00000226918;ID=exon:HG00140_ch_T0001388:4;Name=ENSG00000226918;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21473798	21474664	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG00140_ch_T0001388;gene_id=HG00140_ch_G0000436;Parent=HG00140_ch_T0001388;transcript_name=HG00140_ch_T0001388;gene_name=ENSG00000226918;ID=intron:HG00140_ch_T0001388:4;Name=ENSG00000226918;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21474665	21474775	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG00140_ch_T0001388;gene_id=HG00140_ch_G0000436;Parent=HG00140_ch_T0001388;transcript_name=HG00140_ch_T0001388;gene_name=ENSG00000226918;ID=exon:HG00140_ch_T0001388:5;Name=ENSG00000226918;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21474776	21474856	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG00140_ch_T0001388;gene_id=HG00140_ch_G0000436;Parent=HG00140_ch_T0001388;transcript_name=HG00140_ch_T0001388;gene_name=ENSG00000226918;ID=intron:HG00140_ch_T0001388:5;Name=ENSG00000226918;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21474857	21474945	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG00140_ch_T0001388;gene_id=HG00140_ch_G0000436;Parent=HG00140_ch_T0001388;transcript_name=HG00140_ch_T0001388;gene_name=ENSG00000226918;ID=exon:HG00140_ch_T0001388:6;Name=ENSG00000226918;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21474946	21475368	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG00140_ch_T0001388;gene_id=HG00140_ch_G0000436;Parent=HG00140_ch_T0001388;transcript_name=HG00140_ch_T0001388;gene_name=ENSG00000226918;ID=intron:HG00140_ch_T0001388:6;Name=ENSG00000226918;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21475369	21475546	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG00140_ch_T0001388;gene_id=HG00140_ch_G0000436;Parent=HG00140_ch_T0001388;transcript_name=HG00140_ch_T0001388;gene_name=ENSG00000226918;ID=exon:HG00140_ch_T0001388:7;Name=ENSG00000226918;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21475547	21475822	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG00140_ch_T0001388;gene_id=HG00140_ch_G0000436;Parent=HG00140_ch_T0001388;transcript_name=HG00140_ch_T0001388;gene_name=ENSG00000226918;ID=intron:HG00140_ch_T0001388:7;Name=ENSG00000226918;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21475823	21475944	.	+	.	source_transcript=ENST00000437359.1;source_transcript_name=ENST00000437359;source_gene=ENSG00000226918.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226918.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437359.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437359.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000226918;alternative_source_transcripts=ENST00000437359.1,ENST00000437359.1;transcript_id=HG00140_ch_T0001388;gene_id=HG00140_ch_G0000436;Parent=HG00140_ch_T0001388;transcript_name=HG00140_ch_T0001388;gene_name=ENSG00000226918;ID=exon:HG00140_ch_T0001388:8;Name=ENSG00000226918;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	21540005	21543410	.	-	.	source_gene_common_name=PRORY;source_gene=ENSG00000183146.4;alternative_source_transcripts=ENST00000382764.1,ENST00000382764.1;gene_id=HG00140_ch_G0000437;gene_biotype=lncRNA;gene_name=PRORY;gene_sources=liftoff;ID=HG00140_ch_G0000437;Name=PRORY
HG00140_chrY	CAT	transcript	21540005	21543410	1000	-	.	source_transcript=ENST00000382764.1;source_transcript_name=PRORY-201;source_gene=ENSG00000183146.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183146.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382764.1;transcript_score=299.772;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=ENST00000382764.1,ENST00000382764.1;transcript_id=HG00140_ch_T0001389;gene_id=HG00140_ch_G0000437;Parent=HG00140_ch_G0000437;transcript_name=HG00140_ch_T0001389;gene_name=PRORY;ID=HG00140_ch_T0001389;Name=PRORY
HG00140_chrY	CAT	exon	21540005	21540330	.	-	.	source_transcript=ENST00000382764.1;source_transcript_name=PRORY-201;source_gene=ENSG00000183146.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183146.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382764.1;transcript_score=299.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=ENST00000382764.1,ENST00000382764.1;transcript_id=HG00140_ch_T0001389;gene_id=HG00140_ch_G0000437;Parent=HG00140_ch_T0001389;transcript_name=HG00140_ch_T0001389;gene_name=PRORY;ID=exon:HG00140_ch_T0001389:0;Name=PRORY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21540331	21540481	.	-	.	source_transcript=ENST00000382764.1;source_transcript_name=PRORY-201;source_gene=ENSG00000183146.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183146.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382764.1;transcript_score=299.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=ENST00000382764.1,ENST00000382764.1;transcript_id=HG00140_ch_T0001389;gene_id=HG00140_ch_G0000437;Parent=HG00140_ch_T0001389;transcript_name=HG00140_ch_T0001389;gene_name=PRORY;ID=intron:HG00140_ch_T0001389:0;Name=PRORY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21540482	21540846	.	-	.	source_transcript=ENST00000382764.1;source_transcript_name=PRORY-201;source_gene=ENSG00000183146.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183146.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382764.1;transcript_score=299.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=ENST00000382764.1,ENST00000382764.1;transcript_id=HG00140_ch_T0001389;gene_id=HG00140_ch_G0000437;Parent=HG00140_ch_T0001389;transcript_name=HG00140_ch_T0001389;gene_name=PRORY;ID=exon:HG00140_ch_T0001389:1;Name=PRORY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21540847	21540962	.	-	.	source_transcript=ENST00000382764.1;source_transcript_name=PRORY-201;source_gene=ENSG00000183146.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183146.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382764.1;transcript_score=299.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=ENST00000382764.1,ENST00000382764.1;transcript_id=HG00140_ch_T0001389;gene_id=HG00140_ch_G0000437;Parent=HG00140_ch_T0001389;transcript_name=HG00140_ch_T0001389;gene_name=PRORY;ID=intron:HG00140_ch_T0001389:1;Name=PRORY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21540963	21541019	.	-	.	source_transcript=ENST00000382764.1;source_transcript_name=PRORY-201;source_gene=ENSG00000183146.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183146.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382764.1;transcript_score=299.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=ENST00000382764.1,ENST00000382764.1;transcript_id=HG00140_ch_T0001389;gene_id=HG00140_ch_G0000437;Parent=HG00140_ch_T0001389;transcript_name=HG00140_ch_T0001389;gene_name=PRORY;ID=exon:HG00140_ch_T0001389:2;Name=PRORY;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21541020	21543281	.	-	.	source_transcript=ENST00000382764.1;source_transcript_name=PRORY-201;source_gene=ENSG00000183146.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183146.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382764.1;transcript_score=299.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=ENST00000382764.1,ENST00000382764.1;transcript_id=HG00140_ch_T0001389;gene_id=HG00140_ch_G0000437;Parent=HG00140_ch_T0001389;transcript_name=HG00140_ch_T0001389;gene_name=PRORY;ID=intron:HG00140_ch_T0001389:2;Name=PRORY;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21543282	21543410	.	-	.	source_transcript=ENST00000382764.1;source_transcript_name=PRORY-201;source_gene=ENSG00000183146.4;source_gene_biotype=lncRNA;original_gene_id=ENSG00000183146.4;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000382764.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382764.1;transcript_score=299.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=ENST00000382764.1,ENST00000382764.1;transcript_id=HG00140_ch_T0001389;gene_id=HG00140_ch_G0000437;Parent=HG00140_ch_T0001389;transcript_name=HG00140_ch_T0001389;gene_name=PRORY;ID=exon:HG00140_ch_T0001389:3;Name=PRORY;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	21551687	21608979	.	-	.	source_gene_common_name=ENSG00000293672;source_gene=ENSG00000293672.1;gene_id=HG00140_ch_G0000438;gene_biotype=lncRNA;gene_name=ENSG00000293672;gene_sources=liftoff;ID=HG00140_ch_G0000438;Name=ENSG00000293672
HG00140_chrY	CAT	transcript	21551687	21608979	1000	-	.	source_transcript=ENST00000717385.1;source_transcript_name=ENST00000717385;source_gene=ENSG00000293672.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293672.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717385.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717385.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293672;transcript_id=HG00140_ch_T0001390;gene_id=HG00140_ch_G0000438;Parent=HG00140_ch_G0000438;transcript_name=HG00140_ch_T0001390;gene_name=ENSG00000293672;ID=HG00140_ch_T0001390;Name=ENSG00000293672
HG00140_chrY	CAT	exon	21551687	21552341	.	-	.	source_transcript=ENST00000717385.1;source_transcript_name=ENST00000717385;source_gene=ENSG00000293672.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293672.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717385.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293672;transcript_id=HG00140_ch_T0001390;gene_id=HG00140_ch_G0000438;Parent=HG00140_ch_T0001390;transcript_name=HG00140_ch_T0001390;gene_name=ENSG00000293672;ID=exon:HG00140_ch_T0001390:0;Name=ENSG00000293672;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21552342	21552749	.	-	.	source_transcript=ENST00000717385.1;source_transcript_name=ENST00000717385;source_gene=ENSG00000293672.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293672.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717385.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293672;transcript_id=HG00140_ch_T0001390;gene_id=HG00140_ch_G0000438;Parent=HG00140_ch_T0001390;transcript_name=HG00140_ch_T0001390;gene_name=ENSG00000293672;ID=intron:HG00140_ch_T0001390:0;Name=ENSG00000293672;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21552750	21552838	.	-	.	source_transcript=ENST00000717385.1;source_transcript_name=ENST00000717385;source_gene=ENSG00000293672.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293672.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717385.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293672;transcript_id=HG00140_ch_T0001390;gene_id=HG00140_ch_G0000438;Parent=HG00140_ch_T0001390;transcript_name=HG00140_ch_T0001390;gene_name=ENSG00000293672;ID=exon:HG00140_ch_T0001390:1;Name=ENSG00000293672;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21552839	21608694	.	-	.	source_transcript=ENST00000717385.1;source_transcript_name=ENST00000717385;source_gene=ENSG00000293672.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293672.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717385.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293672;transcript_id=HG00140_ch_T0001390;gene_id=HG00140_ch_G0000438;Parent=HG00140_ch_T0001390;transcript_name=HG00140_ch_T0001390;gene_name=ENSG00000293672;ID=intron:HG00140_ch_T0001390:1;Name=ENSG00000293672;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21608695	21608979	.	-	.	source_transcript=ENST00000717385.1;source_transcript_name=ENST00000717385;source_gene=ENSG00000293672.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293672.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717385.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717385.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293672;transcript_id=HG00140_ch_T0001390;gene_id=HG00140_ch_G0000438;Parent=HG00140_ch_T0001390;transcript_name=HG00140_ch_T0001390;gene_name=ENSG00000293672;ID=exon:HG00140_ch_T0001390:2;Name=ENSG00000293672;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	21551758	21561821	.	-	.	source_gene_common_name=ENSG00000290954;source_gene=ENSG00000290954.2;gene_id=HG00140_ch_G0000439;gene_biotype=lncRNA;gene_name=ENSG00000290954;gene_sources=liftoff;ID=HG00140_ch_G0000439;Name=ENSG00000290954
HG00140_chrY	CAT	transcript	21551758	21561787	1000	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG00140_ch_T0001391;gene_id=HG00140_ch_G0000439;Parent=HG00140_ch_G0000439;transcript_name=HG00140_ch_T0001391;gene_name=ENSG00000290954;ID=HG00140_ch_T0001391;Name=ENSG00000290954
HG00140_chrY	CAT	exon	21551758	21552341	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG00140_ch_T0001391;gene_id=HG00140_ch_G0000439;Parent=HG00140_ch_T0001391;transcript_name=HG00140_ch_T0001391;gene_name=ENSG00000290954;ID=exon:HG00140_ch_T0001391:0;Name=ENSG00000290954;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21552342	21552749	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG00140_ch_T0001391;gene_id=HG00140_ch_G0000439;Parent=HG00140_ch_T0001391;transcript_name=HG00140_ch_T0001391;gene_name=ENSG00000290954;ID=intron:HG00140_ch_T0001391:0;Name=ENSG00000290954;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21552750	21552838	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG00140_ch_T0001391;gene_id=HG00140_ch_G0000439;Parent=HG00140_ch_T0001391;transcript_name=HG00140_ch_T0001391;gene_name=ENSG00000290954;ID=exon:HG00140_ch_T0001391:1;Name=ENSG00000290954;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21552839	21552920	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG00140_ch_T0001391;gene_id=HG00140_ch_G0000439;Parent=HG00140_ch_T0001391;transcript_name=HG00140_ch_T0001391;gene_name=ENSG00000290954;ID=intron:HG00140_ch_T0001391:1;Name=ENSG00000290954;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21552921	21553031	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG00140_ch_T0001391;gene_id=HG00140_ch_G0000439;Parent=HG00140_ch_T0001391;transcript_name=HG00140_ch_T0001391;gene_name=ENSG00000290954;ID=exon:HG00140_ch_T0001391:2;Name=ENSG00000290954;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21553032	21558526	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG00140_ch_T0001391;gene_id=HG00140_ch_G0000439;Parent=HG00140_ch_T0001391;transcript_name=HG00140_ch_T0001391;gene_name=ENSG00000290954;ID=intron:HG00140_ch_T0001391:2;Name=ENSG00000290954;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21558527	21558639	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG00140_ch_T0001391;gene_id=HG00140_ch_G0000439;Parent=HG00140_ch_T0001391;transcript_name=HG00140_ch_T0001391;gene_name=ENSG00000290954;ID=exon:HG00140_ch_T0001391:3;Name=ENSG00000290954;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21558640	21560967	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG00140_ch_T0001391;gene_id=HG00140_ch_G0000439;Parent=HG00140_ch_T0001391;transcript_name=HG00140_ch_T0001391;gene_name=ENSG00000290954;ID=intron:HG00140_ch_T0001391:3;Name=ENSG00000290954;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21560968	21561032	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG00140_ch_T0001391;gene_id=HG00140_ch_G0000439;Parent=HG00140_ch_T0001391;transcript_name=HG00140_ch_T0001391;gene_name=ENSG00000290954;ID=exon:HG00140_ch_T0001391:4;Name=ENSG00000290954;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21561033	21561678	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG00140_ch_T0001391;gene_id=HG00140_ch_G0000439;Parent=HG00140_ch_T0001391;transcript_name=HG00140_ch_T0001391;gene_name=ENSG00000290954;ID=intron:HG00140_ch_T0001391:4;Name=ENSG00000290954;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21561679	21561787	.	-	.	source_transcript=ENST00000717386.1;source_transcript_name=ENST00000717386;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717386.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG00140_ch_T0001391;gene_id=HG00140_ch_G0000439;Parent=HG00140_ch_T0001391;transcript_name=HG00140_ch_T0001391;gene_name=ENSG00000290954;ID=exon:HG00140_ch_T0001391:5;Name=ENSG00000290954;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	21552198	21561821	1000	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG00140_ch_T0001393;gene_id=HG00140_ch_G0000439;Parent=HG00140_ch_G0000439;transcript_name=HG00140_ch_T0001393;gene_name=ENSG00000290954;ID=HG00140_ch_T0001393;Name=ENSG00000290954
HG00140_chrY	CAT	exon	21552198	21552341	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG00140_ch_T0001393;gene_id=HG00140_ch_G0000439;Parent=HG00140_ch_T0001393;transcript_name=HG00140_ch_T0001393;gene_name=ENSG00000290954;ID=exon:HG00140_ch_T0001393:0;Name=ENSG00000290954;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21552342	21552749	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG00140_ch_T0001393;gene_id=HG00140_ch_G0000439;Parent=HG00140_ch_T0001393;transcript_name=HG00140_ch_T0001393;gene_name=ENSG00000290954;ID=intron:HG00140_ch_T0001393:0;Name=ENSG00000290954;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21552750	21552838	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG00140_ch_T0001393;gene_id=HG00140_ch_G0000439;Parent=HG00140_ch_T0001393;transcript_name=HG00140_ch_T0001393;gene_name=ENSG00000290954;ID=exon:HG00140_ch_T0001393:1;Name=ENSG00000290954;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21552839	21552920	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG00140_ch_T0001393;gene_id=HG00140_ch_G0000439;Parent=HG00140_ch_T0001393;transcript_name=HG00140_ch_T0001393;gene_name=ENSG00000290954;ID=intron:HG00140_ch_T0001393:1;Name=ENSG00000290954;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21552921	21553031	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG00140_ch_T0001393;gene_id=HG00140_ch_G0000439;Parent=HG00140_ch_T0001393;transcript_name=HG00140_ch_T0001393;gene_name=ENSG00000290954;ID=exon:HG00140_ch_T0001393:2;Name=ENSG00000290954;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21553032	21557972	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG00140_ch_T0001393;gene_id=HG00140_ch_G0000439;Parent=HG00140_ch_T0001393;transcript_name=HG00140_ch_T0001393;gene_name=ENSG00000290954;ID=intron:HG00140_ch_T0001393:2;Name=ENSG00000290954;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21557973	21558076	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG00140_ch_T0001393;gene_id=HG00140_ch_G0000439;Parent=HG00140_ch_T0001393;transcript_name=HG00140_ch_T0001393;gene_name=ENSG00000290954;ID=exon:HG00140_ch_T0001393:3;Name=ENSG00000290954;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21558077	21558526	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG00140_ch_T0001393;gene_id=HG00140_ch_G0000439;Parent=HG00140_ch_T0001393;transcript_name=HG00140_ch_T0001393;gene_name=ENSG00000290954;ID=intron:HG00140_ch_T0001393:3;Name=ENSG00000290954;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21558527	21558639	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG00140_ch_T0001393;gene_id=HG00140_ch_G0000439;Parent=HG00140_ch_T0001393;transcript_name=HG00140_ch_T0001393;gene_name=ENSG00000290954;ID=exon:HG00140_ch_T0001393:4;Name=ENSG00000290954;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21558640	21561678	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG00140_ch_T0001393;gene_id=HG00140_ch_G0000439;Parent=HG00140_ch_T0001393;transcript_name=HG00140_ch_T0001393;gene_name=ENSG00000290954;ID=intron:HG00140_ch_T0001393:4;Name=ENSG00000290954;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21561679	21561821	.	-	.	source_transcript=ENST00000444169.2;source_transcript_name=ENST00000444169;source_gene=ENSG00000290954.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290954.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000444169.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000444169.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290954;transcript_id=HG00140_ch_T0001393;gene_id=HG00140_ch_G0000439;Parent=HG00140_ch_T0001393;transcript_name=HG00140_ch_T0001393;gene_name=ENSG00000290954;ID=exon:HG00140_ch_T0001393:5;Name=ENSG00000290954;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	21552041	21558635	.	-	.	source_gene_common_name=RBMY2EP;source_gene=ENSG00000223637.9;gene_id=HG00140_ch_G0000440;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY2EP;gene_sources=liftoff;ID=HG00140_ch_G0000440;Name=RBMY2EP
HG00140_chrY	CAT	transcript	21552041	21558635	1000	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=HG00140_ch_T0001392;gene_id=HG00140_ch_G0000440;Parent=HG00140_ch_G0000440;transcript_name=HG00140_ch_T0001392;gene_name=RBMY2EP;ID=HG00140_ch_T0001392;Name=RBMY2EP
HG00140_chrY	CAT	exon	21552041	21552341	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=HG00140_ch_T0001392;gene_id=HG00140_ch_G0000440;Parent=HG00140_ch_T0001392;transcript_name=HG00140_ch_T0001392;gene_name=RBMY2EP;ID=exon:HG00140_ch_T0001392:0;Name=RBMY2EP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21552342	21552749	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=HG00140_ch_T0001392;gene_id=HG00140_ch_G0000440;Parent=HG00140_ch_T0001392;transcript_name=HG00140_ch_T0001392;gene_name=RBMY2EP;ID=intron:HG00140_ch_T0001392:0;Name=RBMY2EP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21552750	21552838	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=HG00140_ch_T0001392;gene_id=HG00140_ch_G0000440;Parent=HG00140_ch_T0001392;transcript_name=HG00140_ch_T0001392;gene_name=RBMY2EP;ID=exon:HG00140_ch_T0001392:1;Name=RBMY2EP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21552839	21552920	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=HG00140_ch_T0001392;gene_id=HG00140_ch_G0000440;Parent=HG00140_ch_T0001392;transcript_name=HG00140_ch_T0001392;gene_name=RBMY2EP;ID=intron:HG00140_ch_T0001392:1;Name=RBMY2EP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21552921	21553031	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=HG00140_ch_T0001392;gene_id=HG00140_ch_G0000440;Parent=HG00140_ch_T0001392;transcript_name=HG00140_ch_T0001392;gene_name=RBMY2EP;ID=exon:HG00140_ch_T0001392:2;Name=RBMY2EP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21553032	21553395	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=HG00140_ch_T0001392;gene_id=HG00140_ch_G0000440;Parent=HG00140_ch_T0001392;transcript_name=HG00140_ch_T0001392;gene_name=RBMY2EP;ID=intron:HG00140_ch_T0001392:2;Name=RBMY2EP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21553396	21553506	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=HG00140_ch_T0001392;gene_id=HG00140_ch_G0000440;Parent=HG00140_ch_T0001392;transcript_name=HG00140_ch_T0001392;gene_name=RBMY2EP;ID=exon:HG00140_ch_T0001392:3;Name=RBMY2EP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21553507	21554387	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=HG00140_ch_T0001392;gene_id=HG00140_ch_G0000440;Parent=HG00140_ch_T0001392;transcript_name=HG00140_ch_T0001392;gene_name=RBMY2EP;ID=intron:HG00140_ch_T0001392:3;Name=RBMY2EP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21554388	21554502	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=HG00140_ch_T0001392;gene_id=HG00140_ch_G0000440;Parent=HG00140_ch_T0001392;transcript_name=HG00140_ch_T0001392;gene_name=RBMY2EP;ID=exon:HG00140_ch_T0001392:4;Name=RBMY2EP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21554503	21557972	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=HG00140_ch_T0001392;gene_id=HG00140_ch_G0000440;Parent=HG00140_ch_T0001392;transcript_name=HG00140_ch_T0001392;gene_name=RBMY2EP;ID=intron:HG00140_ch_T0001392:4;Name=RBMY2EP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21557973	21558076	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=HG00140_ch_T0001392;gene_id=HG00140_ch_G0000440;Parent=HG00140_ch_T0001392;transcript_name=HG00140_ch_T0001392;gene_name=RBMY2EP;ID=exon:HG00140_ch_T0001392:5;Name=RBMY2EP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21558077	21558526	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=HG00140_ch_T0001392;gene_id=HG00140_ch_G0000440;Parent=HG00140_ch_T0001392;transcript_name=HG00140_ch_T0001392;gene_name=RBMY2EP;ID=intron:HG00140_ch_T0001392:5;Name=RBMY2EP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21558527	21558635	.	-	.	source_transcript=ENST00000456360.5;source_transcript_name=RBMY2EP-201;source_gene=ENSG00000223637.9;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223637.9;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000456360.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000456360.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;transcript_id=HG00140_ch_T0001392;gene_id=HG00140_ch_G0000440;Parent=HG00140_ch_T0001392;transcript_name=HG00140_ch_T0001392;gene_name=RBMY2EP;ID=exon:HG00140_ch_T0001392:6;Name=RBMY2EP;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	21562820	21563045	.	+	.	source_gene_common_name=ENSG00000236615;source_gene=ENSG00000236615.1;alternative_source_transcripts=ENST00000428616.1,ENST00000428616.1;gene_id=HG00140_ch_G0000441;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000236615;gene_sources=liftoff;ID=HG00140_ch_G0000441;Name=ENSG00000236615
HG00140_chrY	CAT	transcript	21562820	21563045	1000	+	.	source_transcript=ENST00000428616.1;source_transcript_name=ENST00000428616;source_gene=ENSG00000236615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000428616.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428616.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236615;alternative_source_transcripts=ENST00000428616.1,ENST00000428616.1;transcript_id=HG00140_ch_T0001394;gene_id=HG00140_ch_G0000441;Parent=HG00140_ch_G0000441;transcript_name=HG00140_ch_T0001394;gene_name=ENSG00000236615;ID=HG00140_ch_T0001394;Name=ENSG00000236615
HG00140_chrY	CAT	exon	21562820	21563045	.	+	.	source_transcript=ENST00000428616.1;source_transcript_name=ENST00000428616;source_gene=ENSG00000236615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000428616.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428616.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236615;alternative_source_transcripts=ENST00000428616.1,ENST00000428616.1;transcript_id=HG00140_ch_T0001394;gene_id=HG00140_ch_G0000441;Parent=HG00140_ch_T0001394;transcript_name=HG00140_ch_T0001394;gene_name=ENSG00000236615;ID=exon:HG00140_ch_T0001394:0;Name=ENSG00000236615;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	21581078	21613267	.	-	.	source_gene_common_name=ENSG00000288057;source_gene=ENSG00000288057.2;gene_id=HG00140_ch_G0000442;gene_biotype=lncRNA;gene_name=ENSG00000288057;gene_sources=liftoff;ID=HG00140_ch_G0000442;Name=ENSG00000288057
HG00140_chrY	CAT	transcript	21581078	21613267	1000	-	.	source_transcript=ENST00000660183.1;source_transcript_name=ENST00000660183;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660183.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=HG00140_ch_T0001395;gene_id=HG00140_ch_G0000442;Parent=HG00140_ch_G0000442;transcript_name=HG00140_ch_T0001395;gene_name=ENSG00000288057;ID=HG00140_ch_T0001395;Name=ENSG00000288057
HG00140_chrY	CAT	exon	21581078	21583313	.	-	.	source_transcript=ENST00000660183.1;source_transcript_name=ENST00000660183;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=HG00140_ch_T0001395;gene_id=HG00140_ch_G0000442;Parent=HG00140_ch_T0001395;transcript_name=HG00140_ch_T0001395;gene_name=ENSG00000288057;ID=exon:HG00140_ch_T0001395:0;Name=ENSG00000288057;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21583314	21608694	.	-	.	source_transcript=ENST00000660183.1;source_transcript_name=ENST00000660183;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=HG00140_ch_T0001395;gene_id=HG00140_ch_G0000442;Parent=HG00140_ch_T0001395;transcript_name=HG00140_ch_T0001395;gene_name=ENSG00000288057;ID=intron:HG00140_ch_T0001395:0;Name=ENSG00000288057;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21608695	21608857	.	-	.	source_transcript=ENST00000660183.1;source_transcript_name=ENST00000660183;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=HG00140_ch_T0001395;gene_id=HG00140_ch_G0000442;Parent=HG00140_ch_T0001395;transcript_name=HG00140_ch_T0001395;gene_name=ENSG00000288057;ID=exon:HG00140_ch_T0001395:1;Name=ENSG00000288057;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21608858	21611573	.	-	.	source_transcript=ENST00000660183.1;source_transcript_name=ENST00000660183;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=HG00140_ch_T0001395;gene_id=HG00140_ch_G0000442;Parent=HG00140_ch_T0001395;transcript_name=HG00140_ch_T0001395;gene_name=ENSG00000288057;ID=intron:HG00140_ch_T0001395:1;Name=ENSG00000288057;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21611574	21611713	.	-	.	source_transcript=ENST00000660183.1;source_transcript_name=ENST00000660183;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=HG00140_ch_T0001395;gene_id=HG00140_ch_G0000442;Parent=HG00140_ch_T0001395;transcript_name=HG00140_ch_T0001395;gene_name=ENSG00000288057;ID=exon:HG00140_ch_T0001395:2;Name=ENSG00000288057;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21611714	21612948	.	-	.	source_transcript=ENST00000660183.1;source_transcript_name=ENST00000660183;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=HG00140_ch_T0001395;gene_id=HG00140_ch_G0000442;Parent=HG00140_ch_T0001395;transcript_name=HG00140_ch_T0001395;gene_name=ENSG00000288057;ID=intron:HG00140_ch_T0001395:2;Name=ENSG00000288057;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21612949	21613267	.	-	.	source_transcript=ENST00000660183.1;source_transcript_name=ENST00000660183;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000660183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000660183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=HG00140_ch_T0001395;gene_id=HG00140_ch_G0000442;Parent=HG00140_ch_T0001395;transcript_name=HG00140_ch_T0001395;gene_name=ENSG00000288057;ID=exon:HG00140_ch_T0001395:3;Name=ENSG00000288057;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	21582930	21608896	1000	-	.	source_transcript=ENST00000717387.1;source_transcript_name=ENST00000717387;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717387.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717387.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=HG00140_ch_T0001396;gene_id=HG00140_ch_G0000442;Parent=HG00140_ch_G0000442;transcript_name=HG00140_ch_T0001396;gene_name=ENSG00000288057;ID=HG00140_ch_T0001396;Name=ENSG00000288057
HG00140_chrY	CAT	exon	21582930	21583313	.	-	.	source_transcript=ENST00000717387.1;source_transcript_name=ENST00000717387;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717387.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717387.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=HG00140_ch_T0001396;gene_id=HG00140_ch_G0000442;Parent=HG00140_ch_T0001396;transcript_name=HG00140_ch_T0001396;gene_name=ENSG00000288057;ID=exon:HG00140_ch_T0001396:0;Name=ENSG00000288057;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21583314	21588455	.	-	.	source_transcript=ENST00000717387.1;source_transcript_name=ENST00000717387;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717387.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717387.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=HG00140_ch_T0001396;gene_id=HG00140_ch_G0000442;Parent=HG00140_ch_T0001396;transcript_name=HG00140_ch_T0001396;gene_name=ENSG00000288057;ID=intron:HG00140_ch_T0001396:0;Name=ENSG00000288057;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21588456	21588544	.	-	.	source_transcript=ENST00000717387.1;source_transcript_name=ENST00000717387;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717387.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717387.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=HG00140_ch_T0001396;gene_id=HG00140_ch_G0000442;Parent=HG00140_ch_T0001396;transcript_name=HG00140_ch_T0001396;gene_name=ENSG00000288057;ID=exon:HG00140_ch_T0001396:1;Name=ENSG00000288057;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21588545	21608694	.	-	.	source_transcript=ENST00000717387.1;source_transcript_name=ENST00000717387;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717387.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717387.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=HG00140_ch_T0001396;gene_id=HG00140_ch_G0000442;Parent=HG00140_ch_T0001396;transcript_name=HG00140_ch_T0001396;gene_name=ENSG00000288057;ID=intron:HG00140_ch_T0001396:1;Name=ENSG00000288057;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21608695	21608896	.	-	.	source_transcript=ENST00000717387.1;source_transcript_name=ENST00000717387;source_gene=ENSG00000288057.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000288057.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000717387.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000717387.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000288057;transcript_id=HG00140_ch_T0001396;gene_id=HG00140_ch_G0000442;Parent=HG00140_ch_T0001396;transcript_name=HG00140_ch_T0001396;gene_name=ENSG00000288057;ID=exon:HG00140_ch_T0001396:2;Name=ENSG00000288057;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	21587747	21594296	.	-	.	source_gene_common_name=RBMY2TP;source_gene=ENSG00000237269.1;gene_id=HG00140_ch_G0000443;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY2TP;gene_sources=liftoff;ID=HG00140_ch_G0000443;Name=RBMY2TP
HG00140_chrY	CAT	transcript	21587747	21594296	1000	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=HG00140_ch_T0001397;gene_id=HG00140_ch_G0000443;Parent=HG00140_ch_G0000443;transcript_name=HG00140_ch_T0001397;gene_name=RBMY2TP;ID=HG00140_ch_T0001397;Name=RBMY2TP
HG00140_chrY	CAT	exon	21587747	21588047	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=HG00140_ch_T0001397;gene_id=HG00140_ch_G0000443;Parent=HG00140_ch_T0001397;transcript_name=HG00140_ch_T0001397;gene_name=RBMY2TP;ID=exon:HG00140_ch_T0001397:0;Name=RBMY2TP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21588048	21588455	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=HG00140_ch_T0001397;gene_id=HG00140_ch_G0000443;Parent=HG00140_ch_T0001397;transcript_name=HG00140_ch_T0001397;gene_name=RBMY2TP;ID=intron:HG00140_ch_T0001397:0;Name=RBMY2TP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21588456	21588544	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=HG00140_ch_T0001397;gene_id=HG00140_ch_G0000443;Parent=HG00140_ch_T0001397;transcript_name=HG00140_ch_T0001397;gene_name=RBMY2TP;ID=exon:HG00140_ch_T0001397:1;Name=RBMY2TP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21588545	21588637	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=HG00140_ch_T0001397;gene_id=HG00140_ch_G0000443;Parent=HG00140_ch_T0001397;transcript_name=HG00140_ch_T0001397;gene_name=RBMY2TP;ID=intron:HG00140_ch_T0001397:1;Name=RBMY2TP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21588638	21588748	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=HG00140_ch_T0001397;gene_id=HG00140_ch_G0000443;Parent=HG00140_ch_T0001397;transcript_name=HG00140_ch_T0001397;gene_name=RBMY2TP;ID=exon:HG00140_ch_T0001397:2;Name=RBMY2TP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21588749	21589634	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=HG00140_ch_T0001397;gene_id=HG00140_ch_G0000443;Parent=HG00140_ch_T0001397;transcript_name=HG00140_ch_T0001397;gene_name=RBMY2TP;ID=intron:HG00140_ch_T0001397:2;Name=RBMY2TP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21589635	21589749	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=HG00140_ch_T0001397;gene_id=HG00140_ch_G0000443;Parent=HG00140_ch_T0001397;transcript_name=HG00140_ch_T0001397;gene_name=RBMY2TP;ID=exon:HG00140_ch_T0001397:3;Name=RBMY2TP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21589750	21591741	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=HG00140_ch_T0001397;gene_id=HG00140_ch_G0000443;Parent=HG00140_ch_T0001397;transcript_name=HG00140_ch_T0001397;gene_name=RBMY2TP;ID=intron:HG00140_ch_T0001397:3;Name=RBMY2TP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21591742	21591894	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=HG00140_ch_T0001397;gene_id=HG00140_ch_G0000443;Parent=HG00140_ch_T0001397;transcript_name=HG00140_ch_T0001397;gene_name=RBMY2TP;ID=exon:HG00140_ch_T0001397:4;Name=RBMY2TP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21591895	21594118	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=HG00140_ch_T0001397;gene_id=HG00140_ch_G0000443;Parent=HG00140_ch_T0001397;transcript_name=HG00140_ch_T0001397;gene_name=RBMY2TP;ID=intron:HG00140_ch_T0001397:4;Name=RBMY2TP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21594119	21594296	.	-	.	source_transcript=ENST00000451162.1;source_transcript_name=RBMY2TP-201;source_gene=ENSG00000237269.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000237269.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451162.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451162.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2TP;transcript_id=HG00140_ch_T0001397;gene_id=HG00140_ch_G0000443;Parent=HG00140_ch_T0001397;transcript_name=HG00140_ch_T0001397;gene_name=RBMY2TP;ID=exon:HG00140_ch_T0001397:5;Name=RBMY2TP;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	21625209	21627734	.	+	.	source_gene_common_name=TSPY14P;source_gene=ENSG00000169849.8;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;gene_id=HG00140_ch_G0000444;gene_biotype=unprocessed_pseudogene;gene_name=TSPY14P;gene_sources=liftoff;ID=HG00140_ch_G0000444;Name=TSPY14P
HG00140_chrY	CAT	transcript	21625209	21627734	1000	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=299.89099999999996;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=HG00140_ch_T0001398;gene_id=HG00140_ch_G0000444;Parent=HG00140_ch_G0000444;transcript_name=HG00140_ch_T0001398;gene_name=TSPY14P;ID=HG00140_ch_T0001398;Name=TSPY14P
HG00140_chrY	CAT	exon	21625209	21625682	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=299.89099999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=HG00140_ch_T0001398;gene_id=HG00140_ch_G0000444;Parent=HG00140_ch_T0001398;transcript_name=HG00140_ch_T0001398;gene_name=TSPY14P;ID=exon:HG00140_ch_T0001398:0;Name=TSPY14P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21625683	21626291	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=299.89099999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=HG00140_ch_T0001398;gene_id=HG00140_ch_G0000444;Parent=HG00140_ch_T0001398;transcript_name=HG00140_ch_T0001398;gene_name=TSPY14P;ID=intron:HG00140_ch_T0001398:0;Name=TSPY14P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21626292	21626369	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=299.89099999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=HG00140_ch_T0001398;gene_id=HG00140_ch_G0000444;Parent=HG00140_ch_T0001398;transcript_name=HG00140_ch_T0001398;gene_name=TSPY14P;ID=exon:HG00140_ch_T0001398:1;Name=TSPY14P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21626370	21626497	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=299.89099999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=HG00140_ch_T0001398;gene_id=HG00140_ch_G0000444;Parent=HG00140_ch_T0001398;transcript_name=HG00140_ch_T0001398;gene_name=TSPY14P;ID=intron:HG00140_ch_T0001398:1;Name=TSPY14P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21626498	21626609	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=299.89099999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=HG00140_ch_T0001398;gene_id=HG00140_ch_G0000444;Parent=HG00140_ch_T0001398;transcript_name=HG00140_ch_T0001398;gene_name=TSPY14P;ID=exon:HG00140_ch_T0001398:2;Name=TSPY14P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21626610	21626708	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=299.89099999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=HG00140_ch_T0001398;gene_id=HG00140_ch_G0000444;Parent=HG00140_ch_T0001398;transcript_name=HG00140_ch_T0001398;gene_name=TSPY14P;ID=intron:HG00140_ch_T0001398:2;Name=TSPY14P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21626709	21626854	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=299.89099999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=HG00140_ch_T0001398;gene_id=HG00140_ch_G0000444;Parent=HG00140_ch_T0001398;transcript_name=HG00140_ch_T0001398;gene_name=TSPY14P;ID=exon:HG00140_ch_T0001398:3;Name=TSPY14P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21626855	21626962	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=299.89099999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=HG00140_ch_T0001398;gene_id=HG00140_ch_G0000444;Parent=HG00140_ch_T0001398;transcript_name=HG00140_ch_T0001398;gene_name=TSPY14P;ID=intron:HG00140_ch_T0001398:3;Name=TSPY14P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21626963	21627044	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=299.89099999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=HG00140_ch_T0001398;gene_id=HG00140_ch_G0000444;Parent=HG00140_ch_T0001398;transcript_name=HG00140_ch_T0001398;gene_name=TSPY14P;ID=exon:HG00140_ch_T0001398:4;Name=TSPY14P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21627045	21627711	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=299.89099999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=HG00140_ch_T0001398;gene_id=HG00140_ch_G0000444;Parent=HG00140_ch_T0001398;transcript_name=HG00140_ch_T0001398;gene_name=TSPY14P;ID=intron:HG00140_ch_T0001398:4;Name=TSPY14P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21627712	21627734	.	+	.	source_transcript=ENST00000303979.7;source_transcript_name=TSPY14P-201;source_gene=ENSG00000169849.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169849.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000303979.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000303979.7;transcript_score=299.89099999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY14P;alternative_source_transcripts=ENST00000303979.7,ENST00000303979.7;transcript_id=HG00140_ch_T0001398;gene_id=HG00140_ch_G0000444;Parent=HG00140_ch_T0001398;transcript_name=HG00140_ch_T0001398;gene_name=TSPY14P;ID=exon:HG00140_ch_T0001398:5;Name=TSPY14P;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	21650570	21659018	.	+	.	source_gene_common_name=RBMY1HP;source_gene=ENSG00000169811.8;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;gene_id=HG00140_ch_G0000445;gene_biotype=unprocessed_pseudogene;gene_name=RBMY1HP;gene_sources=liftoff;ID=HG00140_ch_G0000445;Name=RBMY1HP
HG00140_chrY	CAT	transcript	21650570	21659018	1000	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG00140_ch_T0001399;gene_id=HG00140_ch_G0000445;Parent=HG00140_ch_G0000445;transcript_name=HG00140_ch_T0001399;gene_name=RBMY1HP;ID=HG00140_ch_T0001399;Name=RBMY1HP
HG00140_chrY	CAT	exon	21650570	21650747	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG00140_ch_T0001399;gene_id=HG00140_ch_G0000445;Parent=HG00140_ch_T0001399;transcript_name=HG00140_ch_T0001399;gene_name=RBMY1HP;ID=exon:HG00140_ch_T0001399:0;Name=RBMY1HP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21650748	21652660	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG00140_ch_T0001399;gene_id=HG00140_ch_G0000445;Parent=HG00140_ch_T0001399;transcript_name=HG00140_ch_T0001399;gene_name=RBMY1HP;ID=intron:HG00140_ch_T0001399:0;Name=RBMY1HP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21652661	21652813	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG00140_ch_T0001399;gene_id=HG00140_ch_G0000445;Parent=HG00140_ch_T0001399;transcript_name=HG00140_ch_T0001399;gene_name=RBMY1HP;ID=exon:HG00140_ch_T0001399:1;Name=RBMY1HP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21652814	21654823	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG00140_ch_T0001399;gene_id=HG00140_ch_G0000445;Parent=HG00140_ch_T0001399;transcript_name=HG00140_ch_T0001399;gene_name=RBMY1HP;ID=intron:HG00140_ch_T0001399:1;Name=RBMY1HP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21654824	21654938	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG00140_ch_T0001399;gene_id=HG00140_ch_G0000445;Parent=HG00140_ch_T0001399;transcript_name=HG00140_ch_T0001399;gene_name=RBMY1HP;ID=exon:HG00140_ch_T0001399:2;Name=RBMY1HP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21654939	21655893	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG00140_ch_T0001399;gene_id=HG00140_ch_G0000445;Parent=HG00140_ch_T0001399;transcript_name=HG00140_ch_T0001399;gene_name=RBMY1HP;ID=intron:HG00140_ch_T0001399:2;Name=RBMY1HP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21655894	21656004	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG00140_ch_T0001399;gene_id=HG00140_ch_G0000445;Parent=HG00140_ch_T0001399;transcript_name=HG00140_ch_T0001399;gene_name=RBMY1HP;ID=exon:HG00140_ch_T0001399:3;Name=RBMY1HP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21656005	21656445	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG00140_ch_T0001399;gene_id=HG00140_ch_G0000445;Parent=HG00140_ch_T0001399;transcript_name=HG00140_ch_T0001399;gene_name=RBMY1HP;ID=intron:HG00140_ch_T0001399:3;Name=RBMY1HP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21656446	21656556	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG00140_ch_T0001399;gene_id=HG00140_ch_G0000445;Parent=HG00140_ch_T0001399;transcript_name=HG00140_ch_T0001399;gene_name=RBMY1HP;ID=exon:HG00140_ch_T0001399:4;Name=RBMY1HP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21656557	21656990	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG00140_ch_T0001399;gene_id=HG00140_ch_G0000445;Parent=HG00140_ch_T0001399;transcript_name=HG00140_ch_T0001399;gene_name=RBMY1HP;ID=intron:HG00140_ch_T0001399:4;Name=RBMY1HP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21656991	21657101	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG00140_ch_T0001399;gene_id=HG00140_ch_G0000445;Parent=HG00140_ch_T0001399;transcript_name=HG00140_ch_T0001399;gene_name=RBMY1HP;ID=exon:HG00140_ch_T0001399:5;Name=RBMY1HP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21657102	21657534	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG00140_ch_T0001399;gene_id=HG00140_ch_G0000445;Parent=HG00140_ch_T0001399;transcript_name=HG00140_ch_T0001399;gene_name=RBMY1HP;ID=intron:HG00140_ch_T0001399:5;Name=RBMY1HP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21657535	21657645	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG00140_ch_T0001399;gene_id=HG00140_ch_G0000445;Parent=HG00140_ch_T0001399;transcript_name=HG00140_ch_T0001399;gene_name=RBMY1HP;ID=exon:HG00140_ch_T0001399:6;Name=RBMY1HP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21657646	21658022	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG00140_ch_T0001399;gene_id=HG00140_ch_G0000445;Parent=HG00140_ch_T0001399;transcript_name=HG00140_ch_T0001399;gene_name=RBMY1HP;ID=intron:HG00140_ch_T0001399:6;Name=RBMY1HP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21658023	21658133	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG00140_ch_T0001399;gene_id=HG00140_ch_G0000445;Parent=HG00140_ch_T0001399;transcript_name=HG00140_ch_T0001399;gene_name=RBMY1HP;ID=exon:HG00140_ch_T0001399:7;Name=RBMY1HP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21658134	21658219	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG00140_ch_T0001399;gene_id=HG00140_ch_G0000445;Parent=HG00140_ch_T0001399;transcript_name=HG00140_ch_T0001399;gene_name=RBMY1HP;ID=intron:HG00140_ch_T0001399:7;Name=RBMY1HP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21658220	21658308	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG00140_ch_T0001399;gene_id=HG00140_ch_G0000445;Parent=HG00140_ch_T0001399;transcript_name=HG00140_ch_T0001399;gene_name=RBMY1HP;ID=exon:HG00140_ch_T0001399:8;Name=RBMY1HP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21658309	21658719	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG00140_ch_T0001399;gene_id=HG00140_ch_G0000445;Parent=HG00140_ch_T0001399;transcript_name=HG00140_ch_T0001399;gene_name=RBMY1HP;ID=intron:HG00140_ch_T0001399:8;Name=RBMY1HP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21658720	21659018	.	+	.	source_transcript=ENST00000382759.2;source_transcript_name=RBMY1HP-201;source_gene=ENSG00000169811.8;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000169811.8;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000382759.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382759.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1HP;alternative_source_transcripts=ENST00000382759.2,ENST00000382759.2;transcript_id=HG00140_ch_T0001399;gene_id=HG00140_ch_G0000445;Parent=HG00140_ch_T0001399;transcript_name=HG00140_ch_T0001399;gene_name=RBMY1HP;ID=exon:HG00140_ch_T0001399:9;Name=RBMY1HP;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	21665349	21667520	.	-	.	source_gene_common_name=ENSG00000242393;source_gene=ENSG00000242393.1;alternative_source_transcripts=ENST00000456659.1;gene_id=HG00140_ch_G0000446;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000242393;gene_sources=liftoff;ID=HG00140_ch_G0000446;Name=ENSG00000242393
HG00140_chrY	CAT	transcript	21665349	21667520	1000	-	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;alternative_source_transcripts=ENST00000456659.1;transcript_id=HG00140_ch_T0001400;gene_id=HG00140_ch_G0000446;Parent=HG00140_ch_G0000446;transcript_name=HG00140_ch_T0001400;gene_name=ENSG00000242393;ID=HG00140_ch_T0001400;Name=ENSG00000242393
HG00140_chrY	CAT	exon	21665349	21665396	.	-	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;alternative_source_transcripts=ENST00000456659.1;transcript_id=HG00140_ch_T0001400;gene_id=HG00140_ch_G0000446;Parent=HG00140_ch_T0001400;transcript_name=HG00140_ch_T0001400;gene_name=ENSG00000242393;ID=exon:HG00140_ch_T0001400:0;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21665397	21665513	.	-	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;alternative_source_transcripts=ENST00000456659.1;transcript_id=HG00140_ch_T0001400;gene_id=HG00140_ch_G0000446;Parent=HG00140_ch_T0001400;transcript_name=HG00140_ch_T0001400;gene_name=ENSG00000242393;ID=intron:HG00140_ch_T0001400:0;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21665514	21665659	.	-	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;alternative_source_transcripts=ENST00000456659.1;transcript_id=HG00140_ch_T0001400;gene_id=HG00140_ch_G0000446;Parent=HG00140_ch_T0001400;transcript_name=HG00140_ch_T0001400;gene_name=ENSG00000242393;ID=exon:HG00140_ch_T0001400:1;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21665660	21665745	.	-	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;alternative_source_transcripts=ENST00000456659.1;transcript_id=HG00140_ch_T0001400;gene_id=HG00140_ch_G0000446;Parent=HG00140_ch_T0001400;transcript_name=HG00140_ch_T0001400;gene_name=ENSG00000242393;ID=intron:HG00140_ch_T0001400:1;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21665746	21665809	.	-	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;alternative_source_transcripts=ENST00000456659.1;transcript_id=HG00140_ch_T0001400;gene_id=HG00140_ch_G0000446;Parent=HG00140_ch_T0001400;transcript_name=HG00140_ch_T0001400;gene_name=ENSG00000242393;ID=exon:HG00140_ch_T0001400:2;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21665810	21666072	.	-	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;alternative_source_transcripts=ENST00000456659.1;transcript_id=HG00140_ch_T0001400;gene_id=HG00140_ch_G0000446;Parent=HG00140_ch_T0001400;transcript_name=HG00140_ch_T0001400;gene_name=ENSG00000242393;ID=intron:HG00140_ch_T0001400:2;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21666073	21666138	.	-	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;alternative_source_transcripts=ENST00000456659.1;transcript_id=HG00140_ch_T0001400;gene_id=HG00140_ch_G0000446;Parent=HG00140_ch_T0001400;transcript_name=HG00140_ch_T0001400;gene_name=ENSG00000242393;ID=exon:HG00140_ch_T0001400:3;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21666139	21667127	.	-	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;alternative_source_transcripts=ENST00000456659.1;transcript_id=HG00140_ch_T0001400;gene_id=HG00140_ch_G0000446;Parent=HG00140_ch_T0001400;transcript_name=HG00140_ch_T0001400;gene_name=ENSG00000242393;ID=intron:HG00140_ch_T0001400:3;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21667128	21667520	.	-	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;alternative_source_transcripts=ENST00000456659.1;transcript_id=HG00140_ch_T0001400;gene_id=HG00140_ch_G0000446;Parent=HG00140_ch_T0001400;transcript_name=HG00140_ch_T0001400;gene_name=ENSG00000242393;ID=exon:HG00140_ch_T0001400:4;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	21668388	21682835	.	+	.	source_gene_common_name=RBMY1A1;source_gene=ENSG00000234414.8_2;alternative_source_transcripts=ENST00000383020.7;gene_id=HG00140_ch_G0000447;gene_biotype=protein_coding;gene_name=RBMY1A1;gene_sources=liftoff;ID=HG00140_ch_G0000447;Name=RBMY1A1
HG00140_chrY	CAT	transcript	21668388	21682835	100	+	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000383020.7;transcript_id=HG00140_ch_T0001401;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_G0000447;transcript_name=HG00140_ch_T0001401;gene_name=RBMY1A1;ID=HG00140_ch_T0001401;Name=RBMY1A1
HG00140_chrY	CAT	exon	21668388	21668535	.	+	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000383020.7;transcript_id=HG00140_ch_T0001401;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001401;transcript_name=HG00140_ch_T0001401;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001401:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21668536	21670396	.	+	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000383020.7;transcript_id=HG00140_ch_T0001401;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001401;transcript_name=HG00140_ch_T0001401;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001401:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21670397	21670509	.	+	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000383020.7;transcript_id=HG00140_ch_T0001401;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001401;transcript_name=HG00140_ch_T0001401;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001401:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	21670401	21670509	.	+	0	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000383020.7;transcript_id=HG00140_ch_T0001401;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001401;transcript_name=HG00140_ch_T0001401;gene_name=RBMY1A1;ID=CDS:HG00140_ch_T0001401:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	21670401	21670403	.	+	0	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000383020.7;transcript_id=HG00140_ch_T0001401;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001401;transcript_name=HG00140_ch_T0001401;gene_name=RBMY1A1;ID=start_codon:HG00140_ch_T0001401;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21670510	21670983	.	+	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000383020.7;transcript_id=HG00140_ch_T0001401;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001401;transcript_name=HG00140_ch_T0001401;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001401:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21670984	21671087	.	+	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000383020.7;transcript_id=HG00140_ch_T0001401;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001401;transcript_name=HG00140_ch_T0001401;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001401:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	21670984	21671087	.	+	2	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000383020.7;transcript_id=HG00140_ch_T0001401;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001401;transcript_name=HG00140_ch_T0001401;gene_name=RBMY1A1;ID=CDS:HG00140_ch_T0001401:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21671088	21674106	.	+	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000383020.7;transcript_id=HG00140_ch_T0001401;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001401;transcript_name=HG00140_ch_T0001401;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001401:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21674107	21674284	.	+	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000383020.7;transcript_id=HG00140_ch_T0001401;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001401;transcript_name=HG00140_ch_T0001401;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001401:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	21674107	21674284	.	+	0	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000383020.7;transcript_id=HG00140_ch_T0001401;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001401;transcript_name=HG00140_ch_T0001401;gene_name=RBMY1A1;ID=CDS:HG00140_ch_T0001401:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21674285	21676199	.	+	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000383020.7;transcript_id=HG00140_ch_T0001401;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001401;transcript_name=HG00140_ch_T0001401;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001401:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21676200	21676352	.	+	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000383020.7;transcript_id=HG00140_ch_T0001401;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001401;transcript_name=HG00140_ch_T0001401;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001401:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	21676200	21676352	.	+	2	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000383020.7;transcript_id=HG00140_ch_T0001401;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001401;transcript_name=HG00140_ch_T0001401;gene_name=RBMY1A1;ID=CDS:HG00140_ch_T0001401:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21676353	21678362	.	+	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000383020.7;transcript_id=HG00140_ch_T0001401;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001401;transcript_name=HG00140_ch_T0001401;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001401:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21678363	21678477	.	+	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000383020.7;transcript_id=HG00140_ch_T0001401;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001401;transcript_name=HG00140_ch_T0001401;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001401:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	21678363	21678477	.	+	2	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000383020.7;transcript_id=HG00140_ch_T0001401;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001401;transcript_name=HG00140_ch_T0001401;gene_name=RBMY1A1;ID=CDS:HG00140_ch_T0001401:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21678478	21679432	.	+	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000383020.7;transcript_id=HG00140_ch_T0001401;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001401;transcript_name=HG00140_ch_T0001401;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001401:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21679433	21679543	.	+	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000383020.7;transcript_id=HG00140_ch_T0001401;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001401;transcript_name=HG00140_ch_T0001401;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001401:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	21679433	21679543	.	+	1	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000383020.7;transcript_id=HG00140_ch_T0001401;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001401;transcript_name=HG00140_ch_T0001401;gene_name=RBMY1A1;ID=CDS:HG00140_ch_T0001401:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21679544	21679984	.	+	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000383020.7;transcript_id=HG00140_ch_T0001401;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001401;transcript_name=HG00140_ch_T0001401;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001401:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21679985	21680095	.	+	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000383020.7;transcript_id=HG00140_ch_T0001401;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001401;transcript_name=HG00140_ch_T0001401;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001401:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	21679985	21680095	.	+	1	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000383020.7;transcript_id=HG00140_ch_T0001401;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001401;transcript_name=HG00140_ch_T0001401;gene_name=RBMY1A1;ID=CDS:HG00140_ch_T0001401:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21680096	21680529	.	+	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000383020.7;transcript_id=HG00140_ch_T0001401;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001401;transcript_name=HG00140_ch_T0001401;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001401:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21680530	21680640	.	+	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000383020.7;transcript_id=HG00140_ch_T0001401;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001401;transcript_name=HG00140_ch_T0001401;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001401:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	21680530	21680640	.	+	1	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000383020.7;transcript_id=HG00140_ch_T0001401;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001401;transcript_name=HG00140_ch_T0001401;gene_name=RBMY1A1;ID=CDS:HG00140_ch_T0001401:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21680641	21681561	.	+	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000383020.7;transcript_id=HG00140_ch_T0001401;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001401;transcript_name=HG00140_ch_T0001401;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001401:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21681562	21681672	.	+	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000383020.7;transcript_id=HG00140_ch_T0001401;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001401;transcript_name=HG00140_ch_T0001401;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001401:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	21681562	21681672	.	+	1	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000383020.7;transcript_id=HG00140_ch_T0001401;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001401;transcript_name=HG00140_ch_T0001401;gene_name=RBMY1A1;ID=CDS:HG00140_ch_T0001401:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21681673	21681758	.	+	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000383020.7;transcript_id=HG00140_ch_T0001401;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001401;transcript_name=HG00140_ch_T0001401;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001401:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21681759	21681847	.	+	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000383020.7;transcript_id=HG00140_ch_T0001401;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001401;transcript_name=HG00140_ch_T0001401;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001401:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	21681759	21681847	.	+	1	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000383020.7;transcript_id=HG00140_ch_T0001401;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001401;transcript_name=HG00140_ch_T0001401;gene_name=RBMY1A1;ID=CDS:HG00140_ch_T0001401:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21681848	21682258	.	+	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000383020.7;transcript_id=HG00140_ch_T0001401;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001401;transcript_name=HG00140_ch_T0001401;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001401:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21682259	21682835	.	+	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000383020.7;transcript_id=HG00140_ch_T0001401;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001401;transcript_name=HG00140_ch_T0001401;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001401:11;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	21682259	21682557	.	+	2	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000383020.7;transcript_id=HG00140_ch_T0001401;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001401;transcript_name=HG00140_ch_T0001401;gene_name=RBMY1A1;ID=CDS:HG00140_ch_T0001401:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	21682555	21682557	.	+	0	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000383020.7;transcript_id=HG00140_ch_T0001401;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001401;transcript_name=HG00140_ch_T0001401;gene_name=RBMY1A1;ID=stop_codon:HG00140_ch_T0001401;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	21668413	21682835	1000	+	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001402;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_G0000447;transcript_name=HG00140_ch_T0001402;gene_name=RBMY1A1;ID=HG00140_ch_T0001402;Name=RBMY1A1
HG00140_chrY	CAT	exon	21668413	21668535	.	+	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001402;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001402;transcript_name=HG00140_ch_T0001402;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001402:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21668536	21670396	.	+	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001402;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001402;transcript_name=HG00140_ch_T0001402;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001402:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21670397	21670509	.	+	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001402;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001402;transcript_name=HG00140_ch_T0001402;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001402:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	21670401	21670509	.	+	0	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001402;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001402;transcript_name=HG00140_ch_T0001402;gene_name=RBMY1A1;ID=CDS:HG00140_ch_T0001402:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	21670401	21670403	.	+	0	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001402;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001402;transcript_name=HG00140_ch_T0001402;gene_name=RBMY1A1;ID=start_codon:HG00140_ch_T0001402;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21670510	21670983	.	+	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001402;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001402;transcript_name=HG00140_ch_T0001402;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001402:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21670984	21671087	.	+	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001402;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001402;transcript_name=HG00140_ch_T0001402;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001402:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	21670984	21671087	.	+	2	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001402;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001402;transcript_name=HG00140_ch_T0001402;gene_name=RBMY1A1;ID=CDS:HG00140_ch_T0001402:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21671088	21676199	.	+	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001402;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001402;transcript_name=HG00140_ch_T0001402;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001402:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21676200	21676352	.	+	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001402;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001402;transcript_name=HG00140_ch_T0001402;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001402:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	21676200	21676232	.	+	0	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001402;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001402;transcript_name=HG00140_ch_T0001402;gene_name=RBMY1A1;ID=CDS:HG00140_ch_T0001402:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	21676230	21676232	.	+	0	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001402;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001402;transcript_name=HG00140_ch_T0001402;gene_name=RBMY1A1;ID=stop_codon:HG00140_ch_T0001402;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21676353	21678362	.	+	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001402;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001402;transcript_name=HG00140_ch_T0001402;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001402:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21678363	21678477	.	+	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001402;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001402;transcript_name=HG00140_ch_T0001402;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001402:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21678478	21679432	.	+	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001402;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001402;transcript_name=HG00140_ch_T0001402;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001402:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21679433	21679543	.	+	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001402;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001402;transcript_name=HG00140_ch_T0001402;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001402:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21679544	21679984	.	+	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001402;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001402;transcript_name=HG00140_ch_T0001402;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001402:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21679985	21680095	.	+	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001402;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001402;transcript_name=HG00140_ch_T0001402;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001402:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21680096	21680529	.	+	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001402;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001402;transcript_name=HG00140_ch_T0001402;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001402:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21680530	21680640	.	+	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001402;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001402;transcript_name=HG00140_ch_T0001402;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001402:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21680641	21681561	.	+	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001402;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001402;transcript_name=HG00140_ch_T0001402;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001402:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21681562	21681672	.	+	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001402;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001402;transcript_name=HG00140_ch_T0001402;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001402:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21681673	21681758	.	+	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001402;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001402;transcript_name=HG00140_ch_T0001402;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001402:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21681759	21681847	.	+	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001402;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001402;transcript_name=HG00140_ch_T0001402;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001402:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21681848	21682258	.	+	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001402;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001402;transcript_name=HG00140_ch_T0001402;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001402:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21682259	21682835	.	+	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8_2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8_2;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001402;gene_id=HG00140_ch_G0000447;Parent=HG00140_ch_T0001402;transcript_name=HG00140_ch_T0001402;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001402:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	21689362	21691581	.	-	.	source_gene_common_name=ENSG00000229725;source_gene=ENSG00000229725.1;alternative_source_transcripts=ENST00000414540.1;gene_id=HG00140_ch_G0000448;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000229725;gene_sources=liftoff;ID=HG00140_ch_G0000448;Name=ENSG00000229725
HG00140_chrY	CAT	transcript	21689362	21691581	1000	-	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;alternative_source_transcripts=ENST00000414540.1;transcript_id=HG00140_ch_T0001403;gene_id=HG00140_ch_G0000448;Parent=HG00140_ch_G0000448;transcript_name=HG00140_ch_T0001403;gene_name=ENSG00000229725;ID=HG00140_ch_T0001403;Name=ENSG00000229725
HG00140_chrY	CAT	exon	21689362	21689411	.	-	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;alternative_source_transcripts=ENST00000414540.1;transcript_id=HG00140_ch_T0001403;gene_id=HG00140_ch_G0000448;Parent=HG00140_ch_T0001403;transcript_name=HG00140_ch_T0001403;gene_name=ENSG00000229725;ID=exon:HG00140_ch_T0001403:0;Name=ENSG00000229725;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21689412	21689782	.	-	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;alternative_source_transcripts=ENST00000414540.1;transcript_id=HG00140_ch_T0001403;gene_id=HG00140_ch_G0000448;Parent=HG00140_ch_T0001403;transcript_name=HG00140_ch_T0001403;gene_name=ENSG00000229725;ID=intron:HG00140_ch_T0001403:0;Name=ENSG00000229725;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21689783	21689950	.	-	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;alternative_source_transcripts=ENST00000414540.1;transcript_id=HG00140_ch_T0001403;gene_id=HG00140_ch_G0000448;Parent=HG00140_ch_T0001403;transcript_name=HG00140_ch_T0001403;gene_name=ENSG00000229725;ID=exon:HG00140_ch_T0001403:1;Name=ENSG00000229725;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21689951	21691194	.	-	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;alternative_source_transcripts=ENST00000414540.1;transcript_id=HG00140_ch_T0001403;gene_id=HG00140_ch_G0000448;Parent=HG00140_ch_T0001403;transcript_name=HG00140_ch_T0001403;gene_name=ENSG00000229725;ID=intron:HG00140_ch_T0001403:1;Name=ENSG00000229725;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21691195	21691581	.	-	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;alternative_source_transcripts=ENST00000414540.1;transcript_id=HG00140_ch_T0001403;gene_id=HG00140_ch_G0000448;Parent=HG00140_ch_T0001403;transcript_name=HG00140_ch_T0001403;gene_name=ENSG00000229725;ID=exon:HG00140_ch_T0001403:2;Name=ENSG00000229725;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	21716201	21737667	.	-	.	source_gene_common_name=ENSG00000286187;source_gene=ENSG00000286187.2;alternative_source_transcripts=ENST00000651708.2;gene_id=HG00140_ch_G0000449;gene_biotype=lncRNA;gene_name=ENSG00000286187;gene_sources=liftoff;ID=HG00140_ch_G0000449;Name=ENSG00000286187
HG00140_chrY	CAT	transcript	21716201	21737636	1000	-	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=263.4382857142857;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=HG00140_ch_T0001404;gene_id=HG00140_ch_G0000449;Parent=HG00140_ch_G0000449;transcript_name=HG00140_ch_T0001404;gene_name=ENSG00000286187;ID=HG00140_ch_T0001404;Name=ENSG00000286187
HG00140_chrY	CAT	exon	21716201	21719106	.	-	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=263.4382857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=HG00140_ch_T0001404;gene_id=HG00140_ch_G0000449;Parent=HG00140_ch_T0001404;transcript_name=HG00140_ch_T0001404;gene_name=ENSG00000286187;ID=exon:HG00140_ch_T0001404:0;Name=ENSG00000286187;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21719107	21719393	.	-	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=263.4382857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=HG00140_ch_T0001404;gene_id=HG00140_ch_G0000449;Parent=HG00140_ch_T0001404;transcript_name=HG00140_ch_T0001404;gene_name=ENSG00000286187;ID=intron:HG00140_ch_T0001404:0;Name=ENSG00000286187;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21719394	21720758	.	-	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=263.4382857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=HG00140_ch_T0001404;gene_id=HG00140_ch_G0000449;Parent=HG00140_ch_T0001404;transcript_name=HG00140_ch_T0001404;gene_name=ENSG00000286187;ID=exon:HG00140_ch_T0001404:1;Name=ENSG00000286187;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21720759	21721411	.	-	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=263.4382857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=HG00140_ch_T0001404;gene_id=HG00140_ch_G0000449;Parent=HG00140_ch_T0001404;transcript_name=HG00140_ch_T0001404;gene_name=ENSG00000286187;ID=intron:HG00140_ch_T0001404:1;Name=ENSG00000286187;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21721412	21721573	.	-	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=263.4382857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=HG00140_ch_T0001404;gene_id=HG00140_ch_G0000449;Parent=HG00140_ch_T0001404;transcript_name=HG00140_ch_T0001404;gene_name=ENSG00000286187;ID=exon:HG00140_ch_T0001404:2;Name=ENSG00000286187;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21721574	21721756	.	-	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=263.4382857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=HG00140_ch_T0001404;gene_id=HG00140_ch_G0000449;Parent=HG00140_ch_T0001404;transcript_name=HG00140_ch_T0001404;gene_name=ENSG00000286187;ID=intron:HG00140_ch_T0001404:2;Name=ENSG00000286187;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21721757	21723922	.	-	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=263.4382857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=HG00140_ch_T0001404;gene_id=HG00140_ch_G0000449;Parent=HG00140_ch_T0001404;transcript_name=HG00140_ch_T0001404;gene_name=ENSG00000286187;ID=exon:HG00140_ch_T0001404:3;Name=ENSG00000286187;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21723923	21724082	.	-	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=263.4382857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=HG00140_ch_T0001404;gene_id=HG00140_ch_G0000449;Parent=HG00140_ch_T0001404;transcript_name=HG00140_ch_T0001404;gene_name=ENSG00000286187;ID=intron:HG00140_ch_T0001404:3;Name=ENSG00000286187;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21724083	21724242	.	-	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=263.4382857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=HG00140_ch_T0001404;gene_id=HG00140_ch_G0000449;Parent=HG00140_ch_T0001404;transcript_name=HG00140_ch_T0001404;gene_name=ENSG00000286187;ID=exon:HG00140_ch_T0001404:4;Name=ENSG00000286187;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21724243	21725414	.	-	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=263.4382857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=HG00140_ch_T0001404;gene_id=HG00140_ch_G0000449;Parent=HG00140_ch_T0001404;transcript_name=HG00140_ch_T0001404;gene_name=ENSG00000286187;ID=intron:HG00140_ch_T0001404:4;Name=ENSG00000286187;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21725415	21725720	.	-	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=263.4382857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=HG00140_ch_T0001404;gene_id=HG00140_ch_G0000449;Parent=HG00140_ch_T0001404;transcript_name=HG00140_ch_T0001404;gene_name=ENSG00000286187;ID=exon:HG00140_ch_T0001404:5;Name=ENSG00000286187;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21725721	21737348	.	-	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=263.4382857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=HG00140_ch_T0001404;gene_id=HG00140_ch_G0000449;Parent=HG00140_ch_T0001404;transcript_name=HG00140_ch_T0001404;gene_name=ENSG00000286187;ID=intron:HG00140_ch_T0001404:5;Name=ENSG00000286187;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21737349	21737636	.	-	.	source_transcript=ENST00000651708.2;source_transcript_name=ENST00000651708;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000651708.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000651708.2;transcript_score=263.4382857142857;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000651708.2;transcript_id=HG00140_ch_T0001404;gene_id=HG00140_ch_G0000449;Parent=HG00140_ch_T0001404;transcript_name=HG00140_ch_T0001404;gene_name=ENSG00000286187;ID=exon:HG00140_ch_T0001404:6;Name=ENSG00000286187;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	21723751	21737667	1000	-	.	source_transcript=ENST00000807569.1;source_transcript_name=ENST00000807569;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807569.1;transcript_score=276.652;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807569.1;transcript_id=HG00140_ch_T0001405;gene_id=HG00140_ch_G0000449;Parent=HG00140_ch_G0000449;transcript_name=HG00140_ch_T0001405;gene_name=ENSG00000286187;ID=HG00140_ch_T0001405;Name=ENSG00000286187
HG00140_chrY	CAT	exon	21723751	21723922	.	-	.	source_transcript=ENST00000807569.1;source_transcript_name=ENST00000807569;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807569.1;transcript_score=276.652;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807569.1;transcript_id=HG00140_ch_T0001405;gene_id=HG00140_ch_G0000449;Parent=HG00140_ch_T0001405;transcript_name=HG00140_ch_T0001405;gene_name=ENSG00000286187;ID=exon:HG00140_ch_T0001405:0;Name=ENSG00000286187;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21723923	21724082	.	-	.	source_transcript=ENST00000807569.1;source_transcript_name=ENST00000807569;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807569.1;transcript_score=276.652;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807569.1;transcript_id=HG00140_ch_T0001405;gene_id=HG00140_ch_G0000449;Parent=HG00140_ch_T0001405;transcript_name=HG00140_ch_T0001405;gene_name=ENSG00000286187;ID=intron:HG00140_ch_T0001405:0;Name=ENSG00000286187;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21724083	21724242	.	-	.	source_transcript=ENST00000807569.1;source_transcript_name=ENST00000807569;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807569.1;transcript_score=276.652;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807569.1;transcript_id=HG00140_ch_T0001405;gene_id=HG00140_ch_G0000449;Parent=HG00140_ch_T0001405;transcript_name=HG00140_ch_T0001405;gene_name=ENSG00000286187;ID=exon:HG00140_ch_T0001405:1;Name=ENSG00000286187;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21724243	21737348	.	-	.	source_transcript=ENST00000807569.1;source_transcript_name=ENST00000807569;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807569.1;transcript_score=276.652;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807569.1;transcript_id=HG00140_ch_T0001405;gene_id=HG00140_ch_G0000449;Parent=HG00140_ch_T0001405;transcript_name=HG00140_ch_T0001405;gene_name=ENSG00000286187;ID=intron:HG00140_ch_T0001405:1;Name=ENSG00000286187;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21737349	21737667	.	-	.	source_transcript=ENST00000807569.1;source_transcript_name=ENST00000807569;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807569.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807569.1;transcript_score=276.652;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807569.1;transcript_id=HG00140_ch_T0001405;gene_id=HG00140_ch_G0000449;Parent=HG00140_ch_T0001405;transcript_name=HG00140_ch_T0001405;gene_name=ENSG00000286187;ID=exon:HG00140_ch_T0001405:2;Name=ENSG00000286187;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	21723757	21725867	1000	-	.	source_transcript=ENST00000807570.1;source_transcript_name=ENST00000807570;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807570.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807570.1;transcript_score=218.938;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807570.1;transcript_id=HG00140_ch_T0001406;gene_id=HG00140_ch_G0000449;Parent=HG00140_ch_G0000449;transcript_name=HG00140_ch_T0001406;gene_name=ENSG00000286187;ID=HG00140_ch_T0001406;Name=ENSG00000286187
HG00140_chrY	CAT	exon	21723757	21723922	.	-	.	source_transcript=ENST00000807570.1;source_transcript_name=ENST00000807570;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807570.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807570.1;transcript_score=218.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807570.1;transcript_id=HG00140_ch_T0001406;gene_id=HG00140_ch_G0000449;Parent=HG00140_ch_T0001406;transcript_name=HG00140_ch_T0001406;gene_name=ENSG00000286187;ID=exon:HG00140_ch_T0001406:0;Name=ENSG00000286187;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21723923	21724082	.	-	.	source_transcript=ENST00000807570.1;source_transcript_name=ENST00000807570;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807570.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807570.1;transcript_score=218.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807570.1;transcript_id=HG00140_ch_T0001406;gene_id=HG00140_ch_G0000449;Parent=HG00140_ch_T0001406;transcript_name=HG00140_ch_T0001406;gene_name=ENSG00000286187;ID=intron:HG00140_ch_T0001406:0;Name=ENSG00000286187;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21724083	21724242	.	-	.	source_transcript=ENST00000807570.1;source_transcript_name=ENST00000807570;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807570.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807570.1;transcript_score=218.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807570.1;transcript_id=HG00140_ch_T0001406;gene_id=HG00140_ch_G0000449;Parent=HG00140_ch_T0001406;transcript_name=HG00140_ch_T0001406;gene_name=ENSG00000286187;ID=exon:HG00140_ch_T0001406:1;Name=ENSG00000286187;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21724243	21725414	.	-	.	source_transcript=ENST00000807570.1;source_transcript_name=ENST00000807570;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807570.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807570.1;transcript_score=218.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807570.1;transcript_id=HG00140_ch_T0001406;gene_id=HG00140_ch_G0000449;Parent=HG00140_ch_T0001406;transcript_name=HG00140_ch_T0001406;gene_name=ENSG00000286187;ID=intron:HG00140_ch_T0001406:1;Name=ENSG00000286187;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21725415	21725867	.	-	.	source_transcript=ENST00000807570.1;source_transcript_name=ENST00000807570;source_gene=ENSG00000286187.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000286187.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000807570.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000807570.1;transcript_score=218.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286187;alternative_source_transcripts=ENST00000807570.1;transcript_id=HG00140_ch_T0001406;gene_id=HG00140_ch_G0000449;Parent=HG00140_ch_T0001406;transcript_name=HG00140_ch_T0001406;gene_name=ENSG00000286187;ID=exon:HG00140_ch_T0001406:2;Name=ENSG00000286187;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	21744709	21745348	.	+	.	source_gene_common_name=OFD1P16Y;source_gene=ENSG00000277519.1;alternative_source_transcripts=ENST00000620993.1;gene_id=HG00140_ch_G0000450;gene_biotype=unprocessed_pseudogene;gene_name=OFD1P16Y;gene_sources=liftoff;ID=HG00140_ch_G0000450;Name=OFD1P16Y
HG00140_chrY	CAT	transcript	21744709	21745348	1000	+	.	source_transcript=ENST00000620993.1;source_transcript_name=OFD1P16Y-201;source_gene=ENSG00000277519.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000277519.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000620993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000620993.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P16Y;alternative_source_transcripts=ENST00000620993.1;transcript_id=HG00140_ch_T0001407;gene_id=HG00140_ch_G0000450;Parent=HG00140_ch_G0000450;transcript_name=HG00140_ch_T0001407;gene_name=OFD1P16Y;ID=HG00140_ch_T0001407;Name=OFD1P16Y
HG00140_chrY	CAT	exon	21744709	21744849	.	+	.	source_transcript=ENST00000620993.1;source_transcript_name=OFD1P16Y-201;source_gene=ENSG00000277519.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000277519.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000620993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000620993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P16Y;alternative_source_transcripts=ENST00000620993.1;transcript_id=HG00140_ch_T0001407;gene_id=HG00140_ch_G0000450;Parent=HG00140_ch_T0001407;transcript_name=HG00140_ch_T0001407;gene_name=OFD1P16Y;ID=exon:HG00140_ch_T0001407:0;Name=OFD1P16Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21744850	21745171	.	+	.	source_transcript=ENST00000620993.1;source_transcript_name=OFD1P16Y-201;source_gene=ENSG00000277519.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000277519.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000620993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000620993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P16Y;alternative_source_transcripts=ENST00000620993.1;transcript_id=HG00140_ch_T0001407;gene_id=HG00140_ch_G0000450;Parent=HG00140_ch_T0001407;transcript_name=HG00140_ch_T0001407;gene_name=OFD1P16Y;ID=intron:HG00140_ch_T0001407:0;Name=OFD1P16Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21745172	21745348	.	+	.	source_transcript=ENST00000620993.1;source_transcript_name=OFD1P16Y-201;source_gene=ENSG00000277519.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000277519.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000620993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000620993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P16Y;alternative_source_transcripts=ENST00000620993.1;transcript_id=HG00140_ch_T0001407;gene_id=HG00140_ch_G0000450;Parent=HG00140_ch_T0001407;transcript_name=HG00140_ch_T0001407;gene_name=OFD1P16Y;ID=exon:HG00140_ch_T0001407:1;Name=OFD1P16Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	21824734	21826384	.	-	.	source_gene_common_name=CDY11P;source_gene=ENSG00000230029.1;alternative_source_transcripts=ENST00000447168.1;gene_id=HG00140_ch_G0000451;gene_biotype=unprocessed_pseudogene;gene_name=CDY11P;gene_sources=liftoff;ID=HG00140_ch_G0000451;Name=CDY11P
HG00140_chrY	CAT	transcript	21824734	21826384	1000	-	.	source_transcript=ENST00000447168.1;source_transcript_name=CDY11P-201;source_gene=ENSG00000230029.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230029.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447168.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY11P;alternative_source_transcripts=ENST00000447168.1;transcript_id=HG00140_ch_T0001408;gene_id=HG00140_ch_G0000451;Parent=HG00140_ch_G0000451;transcript_name=HG00140_ch_T0001408;gene_name=CDY11P;ID=HG00140_ch_T0001408;Name=CDY11P
HG00140_chrY	CAT	exon	21824734	21826384	.	-	.	source_transcript=ENST00000447168.1;source_transcript_name=CDY11P-201;source_gene=ENSG00000230029.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230029.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447168.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447168.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY11P;alternative_source_transcripts=ENST00000447168.1;transcript_id=HG00140_ch_T0001408;gene_id=HG00140_ch_G0000451;Parent=HG00140_ch_T0001408;transcript_name=HG00140_ch_T0001408;gene_name=CDY11P;ID=exon:HG00140_ch_T0001408:0;Name=CDY11P;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	21841836	21845708	.	+	.	source_gene_common_name=USP9YP8;source_gene=ENSG00000229416.1;alternative_source_transcripts=ENST00000441913.1;gene_id=HG00140_ch_G0000452;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP8;gene_sources=liftoff;ID=HG00140_ch_G0000452;Name=USP9YP8
HG00140_chrY	CAT	transcript	21841836	21845708	1000	+	.	source_transcript=ENST00000441913.1;source_transcript_name=USP9YP8-201;source_gene=ENSG00000229416.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229416.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000441913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441913.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP8;alternative_source_transcripts=ENST00000441913.1;transcript_id=HG00140_ch_T0001409;gene_id=HG00140_ch_G0000452;Parent=HG00140_ch_G0000452;transcript_name=HG00140_ch_T0001409;gene_name=USP9YP8;ID=HG00140_ch_T0001409;Name=USP9YP8
HG00140_chrY	CAT	exon	21841836	21841921	.	+	.	source_transcript=ENST00000441913.1;source_transcript_name=USP9YP8-201;source_gene=ENSG00000229416.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229416.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000441913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441913.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP8;alternative_source_transcripts=ENST00000441913.1;transcript_id=HG00140_ch_T0001409;gene_id=HG00140_ch_G0000452;Parent=HG00140_ch_T0001409;transcript_name=HG00140_ch_T0001409;gene_name=USP9YP8;ID=exon:HG00140_ch_T0001409:0;Name=USP9YP8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21841922	21843730	.	+	.	source_transcript=ENST00000441913.1;source_transcript_name=USP9YP8-201;source_gene=ENSG00000229416.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229416.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000441913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441913.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP8;alternative_source_transcripts=ENST00000441913.1;transcript_id=HG00140_ch_T0001409;gene_id=HG00140_ch_G0000452;Parent=HG00140_ch_T0001409;transcript_name=HG00140_ch_T0001409;gene_name=USP9YP8;ID=intron:HG00140_ch_T0001409:0;Name=USP9YP8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21843731	21843954	.	+	.	source_transcript=ENST00000441913.1;source_transcript_name=USP9YP8-201;source_gene=ENSG00000229416.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229416.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000441913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441913.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP8;alternative_source_transcripts=ENST00000441913.1;transcript_id=HG00140_ch_T0001409;gene_id=HG00140_ch_G0000452;Parent=HG00140_ch_T0001409;transcript_name=HG00140_ch_T0001409;gene_name=USP9YP8;ID=exon:HG00140_ch_T0001409:1;Name=USP9YP8;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21843955	21845518	.	+	.	source_transcript=ENST00000441913.1;source_transcript_name=USP9YP8-201;source_gene=ENSG00000229416.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229416.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000441913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441913.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP8;alternative_source_transcripts=ENST00000441913.1;transcript_id=HG00140_ch_T0001409;gene_id=HG00140_ch_G0000452;Parent=HG00140_ch_T0001409;transcript_name=HG00140_ch_T0001409;gene_name=USP9YP8;ID=intron:HG00140_ch_T0001409:1;Name=USP9YP8;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21845519	21845708	.	+	.	source_transcript=ENST00000441913.1;source_transcript_name=USP9YP8-201;source_gene=ENSG00000229416.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229416.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000441913.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441913.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP8;alternative_source_transcripts=ENST00000441913.1;transcript_id=HG00140_ch_T0001409;gene_id=HG00140_ch_G0000452;Parent=HG00140_ch_T0001409;transcript_name=HG00140_ch_T0001409;gene_name=USP9YP8;ID=exon:HG00140_ch_T0001409:2;Name=USP9YP8;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	21848946	21861266	.	-	.	source_gene_common_name=USP9YP3;source_gene=ENSG00000237023.1;alternative_source_transcripts=ENST00000434481.1;gene_id=HG00140_ch_G0000453;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP3;gene_sources=liftoff;ID=HG00140_ch_G0000453;Name=USP9YP3
HG00140_chrY	CAT	transcript	21848946	21861266	1000	-	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1;transcript_id=HG00140_ch_T0001410;gene_id=HG00140_ch_G0000453;Parent=HG00140_ch_G0000453;transcript_name=HG00140_ch_T0001410;gene_name=USP9YP3;ID=HG00140_ch_T0001410;Name=USP9YP3
HG00140_chrY	CAT	exon	21848946	21849070	.	-	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1;transcript_id=HG00140_ch_T0001410;gene_id=HG00140_ch_G0000453;Parent=HG00140_ch_T0001410;transcript_name=HG00140_ch_T0001410;gene_name=USP9YP3;ID=exon:HG00140_ch_T0001410:0;Name=USP9YP3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21849071	21849480	.	-	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1;transcript_id=HG00140_ch_T0001410;gene_id=HG00140_ch_G0000453;Parent=HG00140_ch_T0001410;transcript_name=HG00140_ch_T0001410;gene_name=USP9YP3;ID=intron:HG00140_ch_T0001410:0;Name=USP9YP3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21849481	21850384	.	-	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1;transcript_id=HG00140_ch_T0001410;gene_id=HG00140_ch_G0000453;Parent=HG00140_ch_T0001410;transcript_name=HG00140_ch_T0001410;gene_name=USP9YP3;ID=exon:HG00140_ch_T0001410:1;Name=USP9YP3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21850385	21852982	.	-	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1;transcript_id=HG00140_ch_T0001410;gene_id=HG00140_ch_G0000453;Parent=HG00140_ch_T0001410;transcript_name=HG00140_ch_T0001410;gene_name=USP9YP3;ID=intron:HG00140_ch_T0001410:1;Name=USP9YP3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21852983	21853109	.	-	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1;transcript_id=HG00140_ch_T0001410;gene_id=HG00140_ch_G0000453;Parent=HG00140_ch_T0001410;transcript_name=HG00140_ch_T0001410;gene_name=USP9YP3;ID=exon:HG00140_ch_T0001410:2;Name=USP9YP3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21853110	21855916	.	-	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1;transcript_id=HG00140_ch_T0001410;gene_id=HG00140_ch_G0000453;Parent=HG00140_ch_T0001410;transcript_name=HG00140_ch_T0001410;gene_name=USP9YP3;ID=intron:HG00140_ch_T0001410:2;Name=USP9YP3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21855917	21856094	.	-	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1;transcript_id=HG00140_ch_T0001410;gene_id=HG00140_ch_G0000453;Parent=HG00140_ch_T0001410;transcript_name=HG00140_ch_T0001410;gene_name=USP9YP3;ID=exon:HG00140_ch_T0001410:3;Name=USP9YP3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21856095	21858214	.	-	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1;transcript_id=HG00140_ch_T0001410;gene_id=HG00140_ch_G0000453;Parent=HG00140_ch_T0001410;transcript_name=HG00140_ch_T0001410;gene_name=USP9YP3;ID=intron:HG00140_ch_T0001410:3;Name=USP9YP3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21858215	21858429	.	-	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1;transcript_id=HG00140_ch_T0001410;gene_id=HG00140_ch_G0000453;Parent=HG00140_ch_T0001410;transcript_name=HG00140_ch_T0001410;gene_name=USP9YP3;ID=exon:HG00140_ch_T0001410:4;Name=USP9YP3;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21858430	21861049	.	-	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1;transcript_id=HG00140_ch_T0001410;gene_id=HG00140_ch_G0000453;Parent=HG00140_ch_T0001410;transcript_name=HG00140_ch_T0001410;gene_name=USP9YP3;ID=intron:HG00140_ch_T0001410:4;Name=USP9YP3;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21861050	21861266	.	-	.	source_transcript=ENST00000434481.1;source_transcript_name=USP9YP3-201;source_gene=ENSG00000237023.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237023.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP3;alternative_source_transcripts=ENST00000434481.1;transcript_id=HG00140_ch_T0001410;gene_id=HG00140_ch_G0000453;Parent=HG00140_ch_T0001410;transcript_name=HG00140_ch_T0001410;gene_name=USP9YP3;ID=exon:HG00140_ch_T0001410:5;Name=USP9YP3;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	21884151	21885717	.	+	.	source_gene_common_name=CDY10P;source_gene=ENSG00000226042.1;alternative_source_transcripts=ENST00000452415.1;gene_id=HG00140_ch_G0000454;gene_biotype=unprocessed_pseudogene;gene_name=CDY10P;gene_sources=liftoff;ID=HG00140_ch_G0000454;Name=CDY10P
HG00140_chrY	CAT	transcript	21884151	21885717	1000	+	.	source_transcript=ENST00000452415.1;source_transcript_name=CDY10P-201;source_gene=ENSG00000226042.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226042.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452415.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452415.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY10P;alternative_source_transcripts=ENST00000452415.1;transcript_id=HG00140_ch_T0001411;gene_id=HG00140_ch_G0000454;Parent=HG00140_ch_G0000454;transcript_name=HG00140_ch_T0001411;gene_name=CDY10P;ID=HG00140_ch_T0001411;Name=CDY10P
HG00140_chrY	CAT	exon	21884151	21885717	.	+	.	source_transcript=ENST00000452415.1;source_transcript_name=CDY10P-201;source_gene=ENSG00000226042.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226042.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452415.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452415.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY10P;alternative_source_transcripts=ENST00000452415.1;transcript_id=HG00140_ch_T0001411;gene_id=HG00140_ch_G0000454;Parent=HG00140_ch_T0001411;transcript_name=HG00140_ch_T0001411;gene_name=CDY10P;ID=exon:HG00140_ch_T0001411:0;Name=CDY10P;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	21891177	21891509	.	+	.	source_gene_common_name=ELOCP5;source_gene=ENSG00000271123.1;alternative_source_transcripts=ENST00000604924.1;gene_id=HG00140_ch_G0000455;gene_biotype=processed_pseudogene;gene_name=ELOCP5;gene_sources=liftoff;ID=HG00140_ch_G0000455;Name=ELOCP5
HG00140_chrY	CAT	transcript	21891177	21891509	1000	+	.	source_transcript=ENST00000604924.1;source_transcript_name=ELOCP5-201;source_gene=ENSG00000271123.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271123.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604924.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604924.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP5;alternative_source_transcripts=ENST00000604924.1;transcript_id=HG00140_ch_T0001412;gene_id=HG00140_ch_G0000455;Parent=HG00140_ch_G0000455;transcript_name=HG00140_ch_T0001412;gene_name=ELOCP5;ID=HG00140_ch_T0001412;Name=ELOCP5
HG00140_chrY	CAT	exon	21891177	21891509	.	+	.	source_transcript=ENST00000604924.1;source_transcript_name=ELOCP5-201;source_gene=ENSG00000271123.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000271123.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604924.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604924.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP5;alternative_source_transcripts=ENST00000604924.1;transcript_id=HG00140_ch_T0001412;gene_id=HG00140_ch_G0000455;Parent=HG00140_ch_T0001412;transcript_name=HG00140_ch_T0001412;gene_name=ELOCP5;ID=exon:HG00140_ch_T0001412:0;Name=ELOCP5;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	21918111	21958101	.	+	.	source_gene_common_name=TTTY13;source_gene=ENSG00000184991.3;alternative_source_transcripts=ENST00000652128.1;gene_id=HG00140_ch_G0000456;gene_biotype=lncRNA;gene_name=TTTY13;gene_sources=liftoff;ID=HG00140_ch_G0000456;Name=TTTY13
HG00140_chrY	CAT	transcript	21918111	21958101	1000	+	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=295.829;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1;transcript_id=HG00140_ch_T0001413;gene_id=HG00140_ch_G0000456;Parent=HG00140_ch_G0000456;transcript_name=HG00140_ch_T0001413;gene_name=TTTY13;ID=HG00140_ch_T0001413;Name=TTTY13
HG00140_chrY	CAT	exon	21918111	21918324	.	+	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=295.829;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1;transcript_id=HG00140_ch_T0001413;gene_id=HG00140_ch_G0000456;Parent=HG00140_ch_T0001413;transcript_name=HG00140_ch_T0001413;gene_name=TTTY13;ID=exon:HG00140_ch_T0001413:0;Name=TTTY13;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21918325	21935532	.	+	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=295.829;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1;transcript_id=HG00140_ch_T0001413;gene_id=HG00140_ch_G0000456;Parent=HG00140_ch_T0001413;transcript_name=HG00140_ch_T0001413;gene_name=TTTY13;ID=intron:HG00140_ch_T0001413:0;Name=TTTY13;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21935533	21935694	.	+	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=295.829;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1;transcript_id=HG00140_ch_T0001413;gene_id=HG00140_ch_G0000456;Parent=HG00140_ch_T0001413;transcript_name=HG00140_ch_T0001413;gene_name=TTTY13;ID=exon:HG00140_ch_T0001413:1;Name=TTTY13;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21935695	21938321	.	+	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=295.829;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1;transcript_id=HG00140_ch_T0001413;gene_id=HG00140_ch_G0000456;Parent=HG00140_ch_T0001413;transcript_name=HG00140_ch_T0001413;gene_name=TTTY13;ID=intron:HG00140_ch_T0001413:1;Name=TTTY13;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21938322	21938413	.	+	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=295.829;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1;transcript_id=HG00140_ch_T0001413;gene_id=HG00140_ch_G0000456;Parent=HG00140_ch_T0001413;transcript_name=HG00140_ch_T0001413;gene_name=TTTY13;ID=exon:HG00140_ch_T0001413:2;Name=TTTY13;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21938414	21939533	.	+	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=295.829;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1;transcript_id=HG00140_ch_T0001413;gene_id=HG00140_ch_G0000456;Parent=HG00140_ch_T0001413;transcript_name=HG00140_ch_T0001413;gene_name=TTTY13;ID=intron:HG00140_ch_T0001413:2;Name=TTTY13;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21939534	21939675	.	+	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=295.829;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1;transcript_id=HG00140_ch_T0001413;gene_id=HG00140_ch_G0000456;Parent=HG00140_ch_T0001413;transcript_name=HG00140_ch_T0001413;gene_name=TTTY13;ID=exon:HG00140_ch_T0001413:3;Name=TTTY13;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21939676	21952038	.	+	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=295.829;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1;transcript_id=HG00140_ch_T0001413;gene_id=HG00140_ch_G0000456;Parent=HG00140_ch_T0001413;transcript_name=HG00140_ch_T0001413;gene_name=TTTY13;ID=intron:HG00140_ch_T0001413:3;Name=TTTY13;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21952039	21952197	.	+	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=295.829;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1;transcript_id=HG00140_ch_T0001413;gene_id=HG00140_ch_G0000456;Parent=HG00140_ch_T0001413;transcript_name=HG00140_ch_T0001413;gene_name=TTTY13;ID=exon:HG00140_ch_T0001413:4;Name=TTTY13;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21952198	21956784	.	+	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=295.829;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1;transcript_id=HG00140_ch_T0001413;gene_id=HG00140_ch_G0000456;Parent=HG00140_ch_T0001413;transcript_name=HG00140_ch_T0001413;gene_name=TTTY13;ID=intron:HG00140_ch_T0001413:4;Name=TTTY13;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21956785	21956859	.	+	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=295.829;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1;transcript_id=HG00140_ch_T0001413;gene_id=HG00140_ch_G0000456;Parent=HG00140_ch_T0001413;transcript_name=HG00140_ch_T0001413;gene_name=TTTY13;ID=exon:HG00140_ch_T0001413:5;Name=TTTY13;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21956860	21957003	.	+	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=295.829;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1;transcript_id=HG00140_ch_T0001413;gene_id=HG00140_ch_G0000456;Parent=HG00140_ch_T0001413;transcript_name=HG00140_ch_T0001413;gene_name=TTTY13;ID=intron:HG00140_ch_T0001413:5;Name=TTTY13;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21957004	21958101	.	+	.	source_transcript=ENST00000652128.1;source_transcript_name=TTTY13-202;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000652128.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000652128.1;transcript_score=295.829;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000652128.1;transcript_id=HG00140_ch_T0001413;gene_id=HG00140_ch_G0000456;Parent=HG00140_ch_T0001413;transcript_name=HG00140_ch_T0001413;gene_name=TTTY13;ID=exon:HG00140_ch_T0001413:6;Name=TTTY13;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	21928529	21939596	1000	+	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=287.253;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2;transcript_id=HG00140_ch_T0001414;gene_id=HG00140_ch_G0000456;Parent=HG00140_ch_G0000456;transcript_name=HG00140_ch_T0001414;gene_name=TTTY13;ID=HG00140_ch_T0001414;Name=TTTY13
HG00140_chrY	CAT	exon	21928529	21928609	.	+	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=287.253;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2;transcript_id=HG00140_ch_T0001414;gene_id=HG00140_ch_G0000456;Parent=HG00140_ch_T0001414;transcript_name=HG00140_ch_T0001414;gene_name=TTTY13;ID=exon:HG00140_ch_T0001414:0;Name=TTTY13;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21928610	21933067	.	+	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=287.253;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2;transcript_id=HG00140_ch_T0001414;gene_id=HG00140_ch_G0000456;Parent=HG00140_ch_T0001414;transcript_name=HG00140_ch_T0001414;gene_name=TTTY13;ID=intron:HG00140_ch_T0001414:0;Name=TTTY13;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21933068	21933229	.	+	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=287.253;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2;transcript_id=HG00140_ch_T0001414;gene_id=HG00140_ch_G0000456;Parent=HG00140_ch_T0001414;transcript_name=HG00140_ch_T0001414;gene_name=TTTY13;ID=exon:HG00140_ch_T0001414:1;Name=TTTY13;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21933230	21933824	.	+	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=287.253;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2;transcript_id=HG00140_ch_T0001414;gene_id=HG00140_ch_G0000456;Parent=HG00140_ch_T0001414;transcript_name=HG00140_ch_T0001414;gene_name=TTTY13;ID=intron:HG00140_ch_T0001414:1;Name=TTTY13;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21933825	21933923	.	+	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=287.253;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2;transcript_id=HG00140_ch_T0001414;gene_id=HG00140_ch_G0000456;Parent=HG00140_ch_T0001414;transcript_name=HG00140_ch_T0001414;gene_name=TTTY13;ID=exon:HG00140_ch_T0001414:2;Name=TTTY13;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21933924	21935532	.	+	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=287.253;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2;transcript_id=HG00140_ch_T0001414;gene_id=HG00140_ch_G0000456;Parent=HG00140_ch_T0001414;transcript_name=HG00140_ch_T0001414;gene_name=TTTY13;ID=intron:HG00140_ch_T0001414:2;Name=TTTY13;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21935533	21935694	.	+	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=287.253;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2;transcript_id=HG00140_ch_T0001414;gene_id=HG00140_ch_G0000456;Parent=HG00140_ch_T0001414;transcript_name=HG00140_ch_T0001414;gene_name=TTTY13;ID=exon:HG00140_ch_T0001414:3;Name=TTTY13;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21935695	21938321	.	+	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=287.253;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2;transcript_id=HG00140_ch_T0001414;gene_id=HG00140_ch_G0000456;Parent=HG00140_ch_T0001414;transcript_name=HG00140_ch_T0001414;gene_name=TTTY13;ID=intron:HG00140_ch_T0001414:3;Name=TTTY13;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21938322	21938413	.	+	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=287.253;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2;transcript_id=HG00140_ch_T0001414;gene_id=HG00140_ch_G0000456;Parent=HG00140_ch_T0001414;transcript_name=HG00140_ch_T0001414;gene_name=TTTY13;ID=exon:HG00140_ch_T0001414:4;Name=TTTY13;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21938414	21939533	.	+	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=287.253;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2;transcript_id=HG00140_ch_T0001414;gene_id=HG00140_ch_G0000456;Parent=HG00140_ch_T0001414;transcript_name=HG00140_ch_T0001414;gene_name=TTTY13;ID=intron:HG00140_ch_T0001414:4;Name=TTTY13;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21939534	21939596	.	+	.	source_transcript=ENST00000330337.2;source_transcript_name=TTTY13-201;source_gene=ENSG00000184991.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000184991.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000330337.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000330337.2;transcript_score=287.253;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=ENST00000330337.2;transcript_id=HG00140_ch_T0001414;gene_id=HG00140_ch_G0000456;Parent=HG00140_ch_T0001414;transcript_name=HG00140_ch_T0001414;gene_name=TTTY13;ID=exon:HG00140_ch_T0001414:5;Name=TTTY13;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	21965116	21967335	.	+	.	source_gene_common_name=ENSG00000229725;source_gene=ENSG00000229725.1;alternative_source_transcripts=ENST00000414540.1;gene_id=HG00140_ch_G0000457;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000229725;gene_sources=liftoff;ID=HG00140_ch_G0000457;Name=ENSG00000229725
HG00140_chrY	CAT	transcript	21965116	21967335	1000	+	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;alternative_source_transcripts=ENST00000414540.1;transcript_id=HG00140_ch_T0001415;gene_id=HG00140_ch_G0000457;Parent=HG00140_ch_G0000457;transcript_name=HG00140_ch_T0001415;gene_name=ENSG00000229725;ID=HG00140_ch_T0001415;Name=ENSG00000229725
HG00140_chrY	CAT	exon	21965116	21965502	.	+	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;alternative_source_transcripts=ENST00000414540.1;transcript_id=HG00140_ch_T0001415;gene_id=HG00140_ch_G0000457;Parent=HG00140_ch_T0001415;transcript_name=HG00140_ch_T0001415;gene_name=ENSG00000229725;ID=exon:HG00140_ch_T0001415:0;Name=ENSG00000229725;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21965503	21966746	.	+	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;alternative_source_transcripts=ENST00000414540.1;transcript_id=HG00140_ch_T0001415;gene_id=HG00140_ch_G0000457;Parent=HG00140_ch_T0001415;transcript_name=HG00140_ch_T0001415;gene_name=ENSG00000229725;ID=intron:HG00140_ch_T0001415:0;Name=ENSG00000229725;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21966747	21966914	.	+	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;alternative_source_transcripts=ENST00000414540.1;transcript_id=HG00140_ch_T0001415;gene_id=HG00140_ch_G0000457;Parent=HG00140_ch_T0001415;transcript_name=HG00140_ch_T0001415;gene_name=ENSG00000229725;ID=exon:HG00140_ch_T0001415:1;Name=ENSG00000229725;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21966915	21967285	.	+	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;alternative_source_transcripts=ENST00000414540.1;transcript_id=HG00140_ch_T0001415;gene_id=HG00140_ch_G0000457;Parent=HG00140_ch_T0001415;transcript_name=HG00140_ch_T0001415;gene_name=ENSG00000229725;ID=intron:HG00140_ch_T0001415:1;Name=ENSG00000229725;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21967286	21967335	.	+	.	source_transcript=ENST00000414540.1;source_transcript_name=ENST00000414540;source_gene=ENSG00000229725.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229725.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414540.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414540.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000229725;alternative_source_transcripts=ENST00000414540.1;transcript_id=HG00140_ch_T0001415;gene_id=HG00140_ch_G0000457;Parent=HG00140_ch_T0001415;transcript_name=HG00140_ch_T0001415;gene_name=ENSG00000229725;ID=exon:HG00140_ch_T0001415:2;Name=ENSG00000229725;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	21973861	21988309	.	-	.	source_gene_common_name=RBMY1D;source_gene=ENSG00000244395.6;alternative_source_transcripts=ENST00000382680.5;gene_id=HG00140_ch_G0000458;gene_biotype=protein_coding;gene_name=RBMY1D;gene_sources=liftoff;ID=HG00140_ch_G0000458;Name=RBMY1D
HG00140_chrY	CAT	transcript	21973861	21988309	100	-	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00140_ch_T0001416;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_G0000458;transcript_name=HG00140_ch_T0001416;gene_name=RBMY1D;ID=HG00140_ch_T0001416;Name=RBMY1D
HG00140_chrY	CAT	exon	21973861	21974437	.	-	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00140_ch_T0001416;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001416;transcript_name=HG00140_ch_T0001416;gene_name=RBMY1D;ID=exon:HG00140_ch_T0001416:0;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	21974139	21974437	.	-	2	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00140_ch_T0001416;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001416;transcript_name=HG00140_ch_T0001416;gene_name=RBMY1D;ID=CDS:HG00140_ch_T0001416:0;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	21974139	21974141	.	-	0	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00140_ch_T0001416;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001416;transcript_name=HG00140_ch_T0001416;gene_name=RBMY1D;ID=stop_codon:HG00140_ch_T0001416;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21974438	21974848	.	-	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00140_ch_T0001416;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001416;transcript_name=HG00140_ch_T0001416;gene_name=RBMY1D;ID=intron:HG00140_ch_T0001416:0;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21974849	21974937	.	-	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00140_ch_T0001416;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001416;transcript_name=HG00140_ch_T0001416;gene_name=RBMY1D;ID=exon:HG00140_ch_T0001416:1;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	21974849	21974937	.	-	1	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00140_ch_T0001416;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001416;transcript_name=HG00140_ch_T0001416;gene_name=RBMY1D;ID=CDS:HG00140_ch_T0001416:1;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21974938	21975024	.	-	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00140_ch_T0001416;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001416;transcript_name=HG00140_ch_T0001416;gene_name=RBMY1D;ID=intron:HG00140_ch_T0001416:1;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21975025	21975135	.	-	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00140_ch_T0001416;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001416;transcript_name=HG00140_ch_T0001416;gene_name=RBMY1D;ID=exon:HG00140_ch_T0001416:2;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	21975025	21975135	.	-	1	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00140_ch_T0001416;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001416;transcript_name=HG00140_ch_T0001416;gene_name=RBMY1D;ID=CDS:HG00140_ch_T0001416:2;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21975136	21976056	.	-	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00140_ch_T0001416;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001416;transcript_name=HG00140_ch_T0001416;gene_name=RBMY1D;ID=intron:HG00140_ch_T0001416:2;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21976057	21976167	.	-	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00140_ch_T0001416;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001416;transcript_name=HG00140_ch_T0001416;gene_name=RBMY1D;ID=exon:HG00140_ch_T0001416:3;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	21976057	21976167	.	-	1	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00140_ch_T0001416;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001416;transcript_name=HG00140_ch_T0001416;gene_name=RBMY1D;ID=CDS:HG00140_ch_T0001416:3;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21976168	21976601	.	-	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00140_ch_T0001416;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001416;transcript_name=HG00140_ch_T0001416;gene_name=RBMY1D;ID=intron:HG00140_ch_T0001416:3;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21976602	21976712	.	-	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00140_ch_T0001416;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001416;transcript_name=HG00140_ch_T0001416;gene_name=RBMY1D;ID=exon:HG00140_ch_T0001416:4;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	21976602	21976712	.	-	1	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00140_ch_T0001416;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001416;transcript_name=HG00140_ch_T0001416;gene_name=RBMY1D;ID=CDS:HG00140_ch_T0001416:4;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21976713	21977153	.	-	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00140_ch_T0001416;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001416;transcript_name=HG00140_ch_T0001416;gene_name=RBMY1D;ID=intron:HG00140_ch_T0001416:4;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21977154	21977264	.	-	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00140_ch_T0001416;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001416;transcript_name=HG00140_ch_T0001416;gene_name=RBMY1D;ID=exon:HG00140_ch_T0001416:5;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	21977154	21977264	.	-	1	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00140_ch_T0001416;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001416;transcript_name=HG00140_ch_T0001416;gene_name=RBMY1D;ID=CDS:HG00140_ch_T0001416:5;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21977265	21978219	.	-	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00140_ch_T0001416;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001416;transcript_name=HG00140_ch_T0001416;gene_name=RBMY1D;ID=intron:HG00140_ch_T0001416:5;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21978220	21978334	.	-	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00140_ch_T0001416;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001416;transcript_name=HG00140_ch_T0001416;gene_name=RBMY1D;ID=exon:HG00140_ch_T0001416:6;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	21978220	21978334	.	-	2	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00140_ch_T0001416;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001416;transcript_name=HG00140_ch_T0001416;gene_name=RBMY1D;ID=CDS:HG00140_ch_T0001416:6;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21978335	21980344	.	-	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00140_ch_T0001416;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001416;transcript_name=HG00140_ch_T0001416;gene_name=RBMY1D;ID=intron:HG00140_ch_T0001416:6;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21980345	21980497	.	-	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00140_ch_T0001416;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001416;transcript_name=HG00140_ch_T0001416;gene_name=RBMY1D;ID=exon:HG00140_ch_T0001416:7;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	21980345	21980497	.	-	2	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00140_ch_T0001416;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001416;transcript_name=HG00140_ch_T0001416;gene_name=RBMY1D;ID=CDS:HG00140_ch_T0001416:7;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21980498	21982412	.	-	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00140_ch_T0001416;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001416;transcript_name=HG00140_ch_T0001416;gene_name=RBMY1D;ID=intron:HG00140_ch_T0001416:7;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21982413	21982590	.	-	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00140_ch_T0001416;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001416;transcript_name=HG00140_ch_T0001416;gene_name=RBMY1D;ID=exon:HG00140_ch_T0001416:8;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	21982413	21982590	.	-	0	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00140_ch_T0001416;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001416;transcript_name=HG00140_ch_T0001416;gene_name=RBMY1D;ID=CDS:HG00140_ch_T0001416:8;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21982591	21985609	.	-	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00140_ch_T0001416;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001416;transcript_name=HG00140_ch_T0001416;gene_name=RBMY1D;ID=intron:HG00140_ch_T0001416:8;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21985610	21985713	.	-	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00140_ch_T0001416;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001416;transcript_name=HG00140_ch_T0001416;gene_name=RBMY1D;ID=exon:HG00140_ch_T0001416:9;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	21985610	21985713	.	-	2	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00140_ch_T0001416;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001416;transcript_name=HG00140_ch_T0001416;gene_name=RBMY1D;ID=CDS:HG00140_ch_T0001416:9;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21985714	21986187	.	-	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00140_ch_T0001416;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001416;transcript_name=HG00140_ch_T0001416;gene_name=RBMY1D;ID=intron:HG00140_ch_T0001416:9;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21986188	21986300	.	-	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00140_ch_T0001416;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001416;transcript_name=HG00140_ch_T0001416;gene_name=RBMY1D;ID=exon:HG00140_ch_T0001416:10;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	21986188	21986296	.	-	0	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00140_ch_T0001416;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001416;transcript_name=HG00140_ch_T0001416;gene_name=RBMY1D;ID=CDS:HG00140_ch_T0001416:10;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	21986294	21986296	.	-	0	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00140_ch_T0001416;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001416;transcript_name=HG00140_ch_T0001416;gene_name=RBMY1D;ID=start_codon:HG00140_ch_T0001416;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21986301	21988161	.	-	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00140_ch_T0001416;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001416;transcript_name=HG00140_ch_T0001416;gene_name=RBMY1D;ID=intron:HG00140_ch_T0001416:10;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21988162	21988309	.	-	.	source_transcript=ENST00000382680.5;source_transcript_name=RBMY1D-202;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382680.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382680.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382680.5;transcript_id=HG00140_ch_T0001416;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001416;transcript_name=HG00140_ch_T0001416;gene_name=RBMY1D;ID=exon:HG00140_ch_T0001416:11;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	21973861	21988284	1000	-	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00140_ch_T0001417;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_G0000458;transcript_name=HG00140_ch_T0001417;gene_name=RBMY1D;ID=HG00140_ch_T0001417;Name=RBMY1D
HG00140_chrY	CAT	exon	21973861	21974437	.	-	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00140_ch_T0001417;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001417;transcript_name=HG00140_ch_T0001417;gene_name=RBMY1D;ID=exon:HG00140_ch_T0001417:0;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21974438	21974848	.	-	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00140_ch_T0001417;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001417;transcript_name=HG00140_ch_T0001417;gene_name=RBMY1D;ID=intron:HG00140_ch_T0001417:0;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21974849	21974937	.	-	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00140_ch_T0001417;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001417;transcript_name=HG00140_ch_T0001417;gene_name=RBMY1D;ID=exon:HG00140_ch_T0001417:1;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21974938	21975024	.	-	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00140_ch_T0001417;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001417;transcript_name=HG00140_ch_T0001417;gene_name=RBMY1D;ID=intron:HG00140_ch_T0001417:1;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21975025	21975135	.	-	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00140_ch_T0001417;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001417;transcript_name=HG00140_ch_T0001417;gene_name=RBMY1D;ID=exon:HG00140_ch_T0001417:2;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21975136	21976056	.	-	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00140_ch_T0001417;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001417;transcript_name=HG00140_ch_T0001417;gene_name=RBMY1D;ID=intron:HG00140_ch_T0001417:2;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21976057	21976167	.	-	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00140_ch_T0001417;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001417;transcript_name=HG00140_ch_T0001417;gene_name=RBMY1D;ID=exon:HG00140_ch_T0001417:3;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21976168	21976601	.	-	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00140_ch_T0001417;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001417;transcript_name=HG00140_ch_T0001417;gene_name=RBMY1D;ID=intron:HG00140_ch_T0001417:3;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21976602	21976712	.	-	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00140_ch_T0001417;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001417;transcript_name=HG00140_ch_T0001417;gene_name=RBMY1D;ID=exon:HG00140_ch_T0001417:4;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21976713	21977153	.	-	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00140_ch_T0001417;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001417;transcript_name=HG00140_ch_T0001417;gene_name=RBMY1D;ID=intron:HG00140_ch_T0001417:4;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21977154	21977264	.	-	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00140_ch_T0001417;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001417;transcript_name=HG00140_ch_T0001417;gene_name=RBMY1D;ID=exon:HG00140_ch_T0001417:5;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21977265	21978219	.	-	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00140_ch_T0001417;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001417;transcript_name=HG00140_ch_T0001417;gene_name=RBMY1D;ID=intron:HG00140_ch_T0001417:5;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21978220	21978334	.	-	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00140_ch_T0001417;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001417;transcript_name=HG00140_ch_T0001417;gene_name=RBMY1D;ID=exon:HG00140_ch_T0001417:6;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21978335	21980344	.	-	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00140_ch_T0001417;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001417;transcript_name=HG00140_ch_T0001417;gene_name=RBMY1D;ID=intron:HG00140_ch_T0001417:6;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21980345	21980497	.	-	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00140_ch_T0001417;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001417;transcript_name=HG00140_ch_T0001417;gene_name=RBMY1D;ID=exon:HG00140_ch_T0001417:7;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	21980465	21980497	.	-	0	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00140_ch_T0001417;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001417;transcript_name=HG00140_ch_T0001417;gene_name=RBMY1D;ID=CDS:HG00140_ch_T0001417:0;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	21980465	21980467	.	-	0	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00140_ch_T0001417;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001417;transcript_name=HG00140_ch_T0001417;gene_name=RBMY1D;ID=stop_codon:HG00140_ch_T0001417;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21980498	21985609	.	-	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00140_ch_T0001417;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001417;transcript_name=HG00140_ch_T0001417;gene_name=RBMY1D;ID=intron:HG00140_ch_T0001417:7;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21985610	21985713	.	-	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00140_ch_T0001417;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001417;transcript_name=HG00140_ch_T0001417;gene_name=RBMY1D;ID=exon:HG00140_ch_T0001417:8;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	21985610	21985713	.	-	2	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00140_ch_T0001417;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001417;transcript_name=HG00140_ch_T0001417;gene_name=RBMY1D;ID=CDS:HG00140_ch_T0001417:1;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21985714	21986187	.	-	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00140_ch_T0001417;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001417;transcript_name=HG00140_ch_T0001417;gene_name=RBMY1D;ID=intron:HG00140_ch_T0001417:8;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21986188	21986300	.	-	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00140_ch_T0001417;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001417;transcript_name=HG00140_ch_T0001417;gene_name=RBMY1D;ID=exon:HG00140_ch_T0001417:9;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	21986188	21986296	.	-	0	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00140_ch_T0001417;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001417;transcript_name=HG00140_ch_T0001417;gene_name=RBMY1D;ID=CDS:HG00140_ch_T0001417:2;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	21986294	21986296	.	-	0	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00140_ch_T0001417;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001417;transcript_name=HG00140_ch_T0001417;gene_name=RBMY1D;ID=start_codon:HG00140_ch_T0001417;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21986301	21988161	.	-	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00140_ch_T0001417;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001417;transcript_name=HG00140_ch_T0001417;gene_name=RBMY1D;ID=intron:HG00140_ch_T0001417:9;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21988162	21988284	.	-	.	source_transcript=ENST00000382653.6;source_transcript_name=RBMY1D-201;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382653.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382653.6;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000382653.6;transcript_id=HG00140_ch_T0001417;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001417;transcript_name=HG00140_ch_T0001417;gene_name=RBMY1D;ID=exon:HG00140_ch_T0001417:10;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	21974093	21988222	100	-	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000418956.2;transcript_id=HG00140_ch_T0001418;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_G0000458;transcript_name=HG00140_ch_T0001418;gene_name=RBMY1D;ID=HG00140_ch_T0001418;Name=RBMY1D
HG00140_chrY	CAT	exon	21974093	21974437	.	-	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000418956.2;transcript_id=HG00140_ch_T0001418;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001418;transcript_name=HG00140_ch_T0001418;gene_name=RBMY1D;ID=exon:HG00140_ch_T0001418:0;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	21974139	21974437	.	-	2	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000418956.2;transcript_id=HG00140_ch_T0001418;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001418;transcript_name=HG00140_ch_T0001418;gene_name=RBMY1D;ID=CDS:HG00140_ch_T0001418:0;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	21974139	21974141	.	-	0	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000418956.2;transcript_id=HG00140_ch_T0001418;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001418;transcript_name=HG00140_ch_T0001418;gene_name=RBMY1D;ID=stop_codon:HG00140_ch_T0001418;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21974438	21974848	.	-	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000418956.2;transcript_id=HG00140_ch_T0001418;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001418;transcript_name=HG00140_ch_T0001418;gene_name=RBMY1D;ID=intron:HG00140_ch_T0001418:0;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21974849	21974937	.	-	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000418956.2;transcript_id=HG00140_ch_T0001418;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001418;transcript_name=HG00140_ch_T0001418;gene_name=RBMY1D;ID=exon:HG00140_ch_T0001418:1;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	21974849	21974937	.	-	1	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000418956.2;transcript_id=HG00140_ch_T0001418;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001418;transcript_name=HG00140_ch_T0001418;gene_name=RBMY1D;ID=CDS:HG00140_ch_T0001418:1;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21974938	21976056	.	-	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000418956.2;transcript_id=HG00140_ch_T0001418;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001418;transcript_name=HG00140_ch_T0001418;gene_name=RBMY1D;ID=intron:HG00140_ch_T0001418:1;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21976057	21976167	.	-	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000418956.2;transcript_id=HG00140_ch_T0001418;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001418;transcript_name=HG00140_ch_T0001418;gene_name=RBMY1D;ID=exon:HG00140_ch_T0001418:2;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	21976057	21976167	.	-	1	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000418956.2;transcript_id=HG00140_ch_T0001418;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001418;transcript_name=HG00140_ch_T0001418;gene_name=RBMY1D;ID=CDS:HG00140_ch_T0001418:2;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21976168	21976601	.	-	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000418956.2;transcript_id=HG00140_ch_T0001418;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001418;transcript_name=HG00140_ch_T0001418;gene_name=RBMY1D;ID=intron:HG00140_ch_T0001418:2;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21976602	21976712	.	-	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000418956.2;transcript_id=HG00140_ch_T0001418;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001418;transcript_name=HG00140_ch_T0001418;gene_name=RBMY1D;ID=exon:HG00140_ch_T0001418:3;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	21976602	21976712	.	-	1	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000418956.2;transcript_id=HG00140_ch_T0001418;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001418;transcript_name=HG00140_ch_T0001418;gene_name=RBMY1D;ID=CDS:HG00140_ch_T0001418:3;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21976713	21977153	.	-	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000418956.2;transcript_id=HG00140_ch_T0001418;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001418;transcript_name=HG00140_ch_T0001418;gene_name=RBMY1D;ID=intron:HG00140_ch_T0001418:3;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21977154	21977264	.	-	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000418956.2;transcript_id=HG00140_ch_T0001418;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001418;transcript_name=HG00140_ch_T0001418;gene_name=RBMY1D;ID=exon:HG00140_ch_T0001418:4;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	21977154	21977264	.	-	1	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000418956.2;transcript_id=HG00140_ch_T0001418;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001418;transcript_name=HG00140_ch_T0001418;gene_name=RBMY1D;ID=CDS:HG00140_ch_T0001418:4;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21977265	21978219	.	-	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000418956.2;transcript_id=HG00140_ch_T0001418;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001418;transcript_name=HG00140_ch_T0001418;gene_name=RBMY1D;ID=intron:HG00140_ch_T0001418:4;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21978220	21978334	.	-	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000418956.2;transcript_id=HG00140_ch_T0001418;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001418;transcript_name=HG00140_ch_T0001418;gene_name=RBMY1D;ID=exon:HG00140_ch_T0001418:5;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	21978220	21978334	.	-	2	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000418956.2;transcript_id=HG00140_ch_T0001418;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001418;transcript_name=HG00140_ch_T0001418;gene_name=RBMY1D;ID=CDS:HG00140_ch_T0001418:5;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21978335	21980344	.	-	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000418956.2;transcript_id=HG00140_ch_T0001418;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001418;transcript_name=HG00140_ch_T0001418;gene_name=RBMY1D;ID=intron:HG00140_ch_T0001418:5;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21980345	21980497	.	-	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000418956.2;transcript_id=HG00140_ch_T0001418;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001418;transcript_name=HG00140_ch_T0001418;gene_name=RBMY1D;ID=exon:HG00140_ch_T0001418:6;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	21980345	21980497	.	-	2	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000418956.2;transcript_id=HG00140_ch_T0001418;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001418;transcript_name=HG00140_ch_T0001418;gene_name=RBMY1D;ID=CDS:HG00140_ch_T0001418:6;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21980498	21982412	.	-	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000418956.2;transcript_id=HG00140_ch_T0001418;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001418;transcript_name=HG00140_ch_T0001418;gene_name=RBMY1D;ID=intron:HG00140_ch_T0001418:6;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21982413	21982590	.	-	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000418956.2;transcript_id=HG00140_ch_T0001418;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001418;transcript_name=HG00140_ch_T0001418;gene_name=RBMY1D;ID=exon:HG00140_ch_T0001418:7;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	21982413	21982590	.	-	0	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000418956.2;transcript_id=HG00140_ch_T0001418;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001418;transcript_name=HG00140_ch_T0001418;gene_name=RBMY1D;ID=CDS:HG00140_ch_T0001418:7;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21982591	21985609	.	-	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000418956.2;transcript_id=HG00140_ch_T0001418;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001418;transcript_name=HG00140_ch_T0001418;gene_name=RBMY1D;ID=intron:HG00140_ch_T0001418:7;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21985610	21985713	.	-	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000418956.2;transcript_id=HG00140_ch_T0001418;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001418;transcript_name=HG00140_ch_T0001418;gene_name=RBMY1D;ID=exon:HG00140_ch_T0001418:8;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	21985610	21985713	.	-	2	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000418956.2;transcript_id=HG00140_ch_T0001418;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001418;transcript_name=HG00140_ch_T0001418;gene_name=RBMY1D;ID=CDS:HG00140_ch_T0001418:8;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21985714	21986187	.	-	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000418956.2;transcript_id=HG00140_ch_T0001418;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001418;transcript_name=HG00140_ch_T0001418;gene_name=RBMY1D;ID=intron:HG00140_ch_T0001418:8;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21986188	21986300	.	-	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000418956.2;transcript_id=HG00140_ch_T0001418;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001418;transcript_name=HG00140_ch_T0001418;gene_name=RBMY1D;ID=exon:HG00140_ch_T0001418:9;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	21986188	21986296	.	-	0	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000418956.2;transcript_id=HG00140_ch_T0001418;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001418;transcript_name=HG00140_ch_T0001418;gene_name=RBMY1D;ID=CDS:HG00140_ch_T0001418:9;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	21986294	21986296	.	-	0	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000418956.2;transcript_id=HG00140_ch_T0001418;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001418;transcript_name=HG00140_ch_T0001418;gene_name=RBMY1D;ID=start_codon:HG00140_ch_T0001418;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21986301	21988161	.	-	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000418956.2;transcript_id=HG00140_ch_T0001418;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001418;transcript_name=HG00140_ch_T0001418;gene_name=RBMY1D;ID=intron:HG00140_ch_T0001418:9;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21988162	21988222	.	-	.	source_transcript=ENST00000418956.2;source_transcript_name=RBMY1D-203;source_gene=ENSG00000244395.6;source_gene_biotype=protein_coding;original_gene_id=ENSG00000244395.6;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000418956.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000418956.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=ENST00000418956.2;transcript_id=HG00140_ch_T0001418;gene_id=HG00140_ch_G0000458;Parent=HG00140_ch_T0001418;transcript_name=HG00140_ch_T0001418;gene_name=RBMY1D;ID=exon:HG00140_ch_T0001418:10;Name=RBMY1D;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	21989177	21991348	.	+	.	source_gene_common_name=ENSG00000228257;source_gene=ENSG00000228257.1;alternative_source_transcripts=ENST00000452426.1;gene_id=HG00140_ch_G0000459;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000228257;gene_sources=liftoff;ID=HG00140_ch_G0000459;Name=ENSG00000228257
HG00140_chrY	CAT	transcript	21989177	21991348	1000	+	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1;transcript_id=HG00140_ch_T0001419;gene_id=HG00140_ch_G0000459;Parent=HG00140_ch_G0000459;transcript_name=HG00140_ch_T0001419;gene_name=ENSG00000228257;ID=HG00140_ch_T0001419;Name=ENSG00000228257
HG00140_chrY	CAT	exon	21989177	21989573	.	+	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1;transcript_id=HG00140_ch_T0001419;gene_id=HG00140_ch_G0000459;Parent=HG00140_ch_T0001419;transcript_name=HG00140_ch_T0001419;gene_name=ENSG00000228257;ID=exon:HG00140_ch_T0001419:0;Name=ENSG00000228257;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21989574	21990558	.	+	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1;transcript_id=HG00140_ch_T0001419;gene_id=HG00140_ch_G0000459;Parent=HG00140_ch_T0001419;transcript_name=HG00140_ch_T0001419;gene_name=ENSG00000228257;ID=intron:HG00140_ch_T0001419:0;Name=ENSG00000228257;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21990559	21990624	.	+	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1;transcript_id=HG00140_ch_T0001419;gene_id=HG00140_ch_G0000459;Parent=HG00140_ch_T0001419;transcript_name=HG00140_ch_T0001419;gene_name=ENSG00000228257;ID=exon:HG00140_ch_T0001419:1;Name=ENSG00000228257;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21990625	21990887	.	+	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1;transcript_id=HG00140_ch_T0001419;gene_id=HG00140_ch_G0000459;Parent=HG00140_ch_T0001419;transcript_name=HG00140_ch_T0001419;gene_name=ENSG00000228257;ID=intron:HG00140_ch_T0001419:1;Name=ENSG00000228257;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21990888	21990951	.	+	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1;transcript_id=HG00140_ch_T0001419;gene_id=HG00140_ch_G0000459;Parent=HG00140_ch_T0001419;transcript_name=HG00140_ch_T0001419;gene_name=ENSG00000228257;ID=exon:HG00140_ch_T0001419:2;Name=ENSG00000228257;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21990952	21991037	.	+	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1;transcript_id=HG00140_ch_T0001419;gene_id=HG00140_ch_G0000459;Parent=HG00140_ch_T0001419;transcript_name=HG00140_ch_T0001419;gene_name=ENSG00000228257;ID=intron:HG00140_ch_T0001419:2;Name=ENSG00000228257;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21991038	21991183	.	+	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1;transcript_id=HG00140_ch_T0001419;gene_id=HG00140_ch_G0000459;Parent=HG00140_ch_T0001419;transcript_name=HG00140_ch_T0001419;gene_name=ENSG00000228257;ID=exon:HG00140_ch_T0001419:3;Name=ENSG00000228257;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21991184	21991300	.	+	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1;transcript_id=HG00140_ch_T0001419;gene_id=HG00140_ch_G0000459;Parent=HG00140_ch_T0001419;transcript_name=HG00140_ch_T0001419;gene_name=ENSG00000228257;ID=intron:HG00140_ch_T0001419:3;Name=ENSG00000228257;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21991301	21991348	.	+	.	source_transcript=ENST00000452426.1;source_transcript_name=ENST00000452426;source_gene=ENSG00000228257.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228257.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000228257;alternative_source_transcripts=ENST00000452426.1;transcript_id=HG00140_ch_T0001419;gene_id=HG00140_ch_G0000459;Parent=HG00140_ch_T0001419;transcript_name=HG00140_ch_T0001419;gene_name=ENSG00000228257;ID=exon:HG00140_ch_T0001419:4;Name=ENSG00000228257;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	21997401	22011825	.	-	.	source_gene_common_name=RBMY1E;source_gene=ENSG00000242389.9;alternative_source_transcripts=ENST00000382639.7;gene_id=HG00140_ch_G0000460;gene_biotype=protein_coding;gene_name=RBMY1E;gene_sources=liftoff;ID=HG00140_ch_G0000460;Name=RBMY1E
HG00140_chrY	CAT	transcript	21997401	22011825	1000	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001420;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_G0000460;transcript_name=HG00140_ch_T0001420;gene_name=RBMY1E;ID=HG00140_ch_T0001420;Name=RBMY1E
HG00140_chrY	CAT	exon	21997401	21997977	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001420;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001420;transcript_name=HG00140_ch_T0001420;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001420:0;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21997978	21998388	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001420;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001420;transcript_name=HG00140_ch_T0001420;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001420:0;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21998389	21998477	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001420;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001420;transcript_name=HG00140_ch_T0001420;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001420:1;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21998478	21998564	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001420;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001420;transcript_name=HG00140_ch_T0001420;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001420:1;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21998565	21998675	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001420;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001420;transcript_name=HG00140_ch_T0001420;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001420:2;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21998676	21999595	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001420;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001420;transcript_name=HG00140_ch_T0001420;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001420:2;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21999596	21999706	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001420;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001420;transcript_name=HG00140_ch_T0001420;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001420:3;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21999707	22000140	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001420;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001420;transcript_name=HG00140_ch_T0001420;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001420:3;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22000141	22000251	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001420;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001420;transcript_name=HG00140_ch_T0001420;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001420:4;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22000252	22000692	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001420;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001420;transcript_name=HG00140_ch_T0001420;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001420:4;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22000693	22000803	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001420;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001420;transcript_name=HG00140_ch_T0001420;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001420:5;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22000804	22001758	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001420;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001420;transcript_name=HG00140_ch_T0001420;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001420:5;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22001759	22001873	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001420;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001420;transcript_name=HG00140_ch_T0001420;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001420:6;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22001874	22003883	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001420;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001420;transcript_name=HG00140_ch_T0001420;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001420:6;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22003884	22004036	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001420;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001420;transcript_name=HG00140_ch_T0001420;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001420:7;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22004004	22004036	.	-	0	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001420;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001420;transcript_name=HG00140_ch_T0001420;gene_name=RBMY1E;ID=CDS:HG00140_ch_T0001420:0;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	22004004	22004006	.	-	0	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001420;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001420;transcript_name=HG00140_ch_T0001420;gene_name=RBMY1E;ID=stop_codon:HG00140_ch_T0001420;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22004037	22009148	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001420;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001420;transcript_name=HG00140_ch_T0001420;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001420:7;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22009149	22009252	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001420;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001420;transcript_name=HG00140_ch_T0001420;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001420:8;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22009149	22009252	.	-	2	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001420;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001420;transcript_name=HG00140_ch_T0001420;gene_name=RBMY1E;ID=CDS:HG00140_ch_T0001420:1;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22009253	22009728	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001420;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001420;transcript_name=HG00140_ch_T0001420;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001420:8;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22009729	22009841	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001420;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001420;transcript_name=HG00140_ch_T0001420;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001420:9;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22009729	22009837	.	-	0	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001420;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001420;transcript_name=HG00140_ch_T0001420;gene_name=RBMY1E;ID=CDS:HG00140_ch_T0001420:2;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	22009835	22009837	.	-	0	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001420;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001420;transcript_name=HG00140_ch_T0001420;gene_name=RBMY1E;ID=start_codon:HG00140_ch_T0001420;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22009842	22011702	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001420;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001420;transcript_name=HG00140_ch_T0001420;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001420:9;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22011703	22011825	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=ENST00000382639.7;transcript_id=HG00140_ch_T0001420;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001420;transcript_name=HG00140_ch_T0001420;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001420:10;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	21997403	22011815	100	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001421;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_G0000460;transcript_name=HG00140_ch_T0001421;gene_name=RBMY1E;ID=HG00140_ch_T0001421;Name=RBMY1E
HG00140_chrY	CAT	exon	21997403	21997977	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001421;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001421;transcript_name=HG00140_ch_T0001421;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001421:0;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	21997679	21997977	.	-	2	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001421;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001421;transcript_name=HG00140_ch_T0001421;gene_name=RBMY1E;ID=CDS:HG00140_ch_T0001421:0;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	21997679	21997681	.	-	0	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001421;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001421;transcript_name=HG00140_ch_T0001421;gene_name=RBMY1E;ID=stop_codon:HG00140_ch_T0001421;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21997978	21998388	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001421;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001421;transcript_name=HG00140_ch_T0001421;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001421:0;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21998389	21998477	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001421;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001421;transcript_name=HG00140_ch_T0001421;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001421:1;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	21998389	21998477	.	-	1	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001421;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001421;transcript_name=HG00140_ch_T0001421;gene_name=RBMY1E;ID=CDS:HG00140_ch_T0001421:1;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21998478	21999595	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001421;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001421;transcript_name=HG00140_ch_T0001421;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001421:1;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21999596	21999706	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001421;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001421;transcript_name=HG00140_ch_T0001421;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001421:2;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	21999596	21999706	.	-	1	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001421;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001421;transcript_name=HG00140_ch_T0001421;gene_name=RBMY1E;ID=CDS:HG00140_ch_T0001421:2;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21999707	22000140	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001421;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001421;transcript_name=HG00140_ch_T0001421;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001421:2;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22000141	22000251	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001421;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001421;transcript_name=HG00140_ch_T0001421;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001421:3;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22000141	22000251	.	-	1	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001421;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001421;transcript_name=HG00140_ch_T0001421;gene_name=RBMY1E;ID=CDS:HG00140_ch_T0001421:3;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22000252	22000692	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001421;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001421;transcript_name=HG00140_ch_T0001421;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001421:3;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22000693	22000803	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001421;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001421;transcript_name=HG00140_ch_T0001421;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001421:4;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22000693	22000803	.	-	1	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001421;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001421;transcript_name=HG00140_ch_T0001421;gene_name=RBMY1E;ID=CDS:HG00140_ch_T0001421:4;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22000804	22001758	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001421;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001421;transcript_name=HG00140_ch_T0001421;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001421:4;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22001759	22001873	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001421;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001421;transcript_name=HG00140_ch_T0001421;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001421:5;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22001759	22001873	.	-	2	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001421;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001421;transcript_name=HG00140_ch_T0001421;gene_name=RBMY1E;ID=CDS:HG00140_ch_T0001421:5;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22001874	22003883	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001421;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001421;transcript_name=HG00140_ch_T0001421;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001421:5;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22003884	22004036	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001421;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001421;transcript_name=HG00140_ch_T0001421;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001421:6;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22003884	22004036	.	-	2	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001421;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001421;transcript_name=HG00140_ch_T0001421;gene_name=RBMY1E;ID=CDS:HG00140_ch_T0001421:6;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22004037	22005951	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001421;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001421;transcript_name=HG00140_ch_T0001421;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001421:6;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22005952	22006129	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001421;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001421;transcript_name=HG00140_ch_T0001421;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001421:7;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22005952	22006129	.	-	0	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001421;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001421;transcript_name=HG00140_ch_T0001421;gene_name=RBMY1E;ID=CDS:HG00140_ch_T0001421:7;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22006130	22009148	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001421;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001421;transcript_name=HG00140_ch_T0001421;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001421:7;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22009149	22009252	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001421;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001421;transcript_name=HG00140_ch_T0001421;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001421:8;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22009149	22009252	.	-	2	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001421;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001421;transcript_name=HG00140_ch_T0001421;gene_name=RBMY1E;ID=CDS:HG00140_ch_T0001421:8;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22009253	22009728	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001421;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001421;transcript_name=HG00140_ch_T0001421;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001421:8;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22009729	22009841	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001421;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001421;transcript_name=HG00140_ch_T0001421;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001421:9;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22009729	22009837	.	-	0	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001421;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001421;transcript_name=HG00140_ch_T0001421;gene_name=RBMY1E;ID=CDS:HG00140_ch_T0001421:9;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	22009835	22009837	.	-	0	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001421;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001421;transcript_name=HG00140_ch_T0001421;gene_name=RBMY1E;ID=start_codon:HG00140_ch_T0001421;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22009842	22011702	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001421;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001421;transcript_name=HG00140_ch_T0001421;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001421:9;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22011703	22011815	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001421;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001421;transcript_name=HG00140_ch_T0001421;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001421:10;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	21997405	22011815	100	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001422;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_G0000460;transcript_name=HG00140_ch_T0001422;gene_name=RBMY1E;ID=HG00140_ch_T0001422;Name=RBMY1E
HG00140_chrY	CAT	exon	21997405	21997977	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001422;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001422;transcript_name=HG00140_ch_T0001422;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001422:0;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	21997679	21997977	.	-	2	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001422;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001422;transcript_name=HG00140_ch_T0001422;gene_name=RBMY1E;ID=CDS:HG00140_ch_T0001422:0;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	21997679	21997681	.	-	0	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001422;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001422;transcript_name=HG00140_ch_T0001422;gene_name=RBMY1E;ID=stop_codon:HG00140_ch_T0001422;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21997978	21998388	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001422;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001422;transcript_name=HG00140_ch_T0001422;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001422:0;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21998389	21998477	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001422;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001422;transcript_name=HG00140_ch_T0001422;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001422:1;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	21998389	21998477	.	-	1	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001422;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001422;transcript_name=HG00140_ch_T0001422;gene_name=RBMY1E;ID=CDS:HG00140_ch_T0001422:1;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21998478	21998564	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001422;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001422;transcript_name=HG00140_ch_T0001422;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001422:1;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21998565	21998675	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001422;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001422;transcript_name=HG00140_ch_T0001422;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001422:2;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	21998565	21998675	.	-	1	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001422;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001422;transcript_name=HG00140_ch_T0001422;gene_name=RBMY1E;ID=CDS:HG00140_ch_T0001422:2;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21998676	21999595	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001422;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001422;transcript_name=HG00140_ch_T0001422;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001422:2;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	21999596	21999706	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001422;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001422;transcript_name=HG00140_ch_T0001422;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001422:3;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	21999596	21999706	.	-	1	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001422;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001422;transcript_name=HG00140_ch_T0001422;gene_name=RBMY1E;ID=CDS:HG00140_ch_T0001422:3;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	21999707	22000140	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001422;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001422;transcript_name=HG00140_ch_T0001422;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001422:3;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22000141	22000251	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001422;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001422;transcript_name=HG00140_ch_T0001422;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001422:4;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22000141	22000251	.	-	1	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001422;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001422;transcript_name=HG00140_ch_T0001422;gene_name=RBMY1E;ID=CDS:HG00140_ch_T0001422:4;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22000252	22000692	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001422;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001422;transcript_name=HG00140_ch_T0001422;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001422:4;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22000693	22000803	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001422;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001422;transcript_name=HG00140_ch_T0001422;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001422:5;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22000693	22000803	.	-	1	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001422;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001422;transcript_name=HG00140_ch_T0001422;gene_name=RBMY1E;ID=CDS:HG00140_ch_T0001422:5;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22000804	22001758	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001422;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001422;transcript_name=HG00140_ch_T0001422;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001422:5;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22001759	22001873	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001422;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001422;transcript_name=HG00140_ch_T0001422;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001422:6;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22001759	22001873	.	-	2	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001422;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001422;transcript_name=HG00140_ch_T0001422;gene_name=RBMY1E;ID=CDS:HG00140_ch_T0001422:6;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22001874	22003883	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001422;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001422;transcript_name=HG00140_ch_T0001422;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001422:6;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22003884	22004036	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001422;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001422;transcript_name=HG00140_ch_T0001422;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001422:7;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22003884	22004036	.	-	2	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001422;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001422;transcript_name=HG00140_ch_T0001422;gene_name=RBMY1E;ID=CDS:HG00140_ch_T0001422:7;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22004037	22005951	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001422;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001422;transcript_name=HG00140_ch_T0001422;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001422:7;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22005952	22006129	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001422;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001422;transcript_name=HG00140_ch_T0001422;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001422:8;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22005952	22006129	.	-	0	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001422;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001422;transcript_name=HG00140_ch_T0001422;gene_name=RBMY1E;ID=CDS:HG00140_ch_T0001422:8;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22006130	22009148	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001422;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001422;transcript_name=HG00140_ch_T0001422;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001422:8;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22009149	22009252	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001422;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001422;transcript_name=HG00140_ch_T0001422;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001422:9;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22009149	22009252	.	-	2	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001422;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001422;transcript_name=HG00140_ch_T0001422;gene_name=RBMY1E;ID=CDS:HG00140_ch_T0001422:9;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22009253	22009728	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001422;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001422;transcript_name=HG00140_ch_T0001422;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001422:9;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22009729	22009841	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001422;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001422;transcript_name=HG00140_ch_T0001422;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001422:10;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22009729	22009837	.	-	0	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001422;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001422;transcript_name=HG00140_ch_T0001422;gene_name=RBMY1E;ID=CDS:HG00140_ch_T0001422:10;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	22009835	22009837	.	-	0	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001422;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001422;transcript_name=HG00140_ch_T0001422;gene_name=RBMY1E;ID=start_codon:HG00140_ch_T0001422;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22009842	22011702	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001422;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001422;transcript_name=HG00140_ch_T0001422;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001422:10;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22011703	22011815	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001422;gene_id=HG00140_ch_G0000460;Parent=HG00140_ch_T0001422;transcript_name=HG00140_ch_T0001422;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001422:11;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	22012718	22014883	.	+	.	source_gene_common_name=ENSG00000251618;source_gene=ENSG00000251618.1;gene_id=HG00140_ch_G0000461;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000251618;gene_sources=liftoff;ID=HG00140_ch_G0000461;Name=ENSG00000251618
HG00140_chrY	CAT	transcript	22012718	22014883	1000	+	.	source_transcript=ENST00000509611.1;source_transcript_name=ENST00000509611;source_gene=ENSG00000251618.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000251618.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509611.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509611.1;transcript_score=299.86199999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251618;transcript_id=HG00140_ch_T0001423;gene_id=HG00140_ch_G0000461;Parent=HG00140_ch_G0000461;transcript_name=HG00140_ch_T0001423;gene_name=ENSG00000251618;ID=HG00140_ch_T0001423;Name=ENSG00000251618
HG00140_chrY	CAT	exon	22012718	22013102	.	+	.	source_transcript=ENST00000509611.1;source_transcript_name=ENST00000509611;source_gene=ENSG00000251618.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000251618.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509611.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509611.1;transcript_score=299.86199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251618;transcript_id=HG00140_ch_T0001423;gene_id=HG00140_ch_G0000461;Parent=HG00140_ch_T0001423;transcript_name=HG00140_ch_T0001423;gene_name=ENSG00000251618;ID=exon:HG00140_ch_T0001423:0;Name=ENSG00000251618;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22013103	22014099	.	+	.	source_transcript=ENST00000509611.1;source_transcript_name=ENST00000509611;source_gene=ENSG00000251618.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000251618.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509611.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509611.1;transcript_score=299.86199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251618;transcript_id=HG00140_ch_T0001423;gene_id=HG00140_ch_G0000461;Parent=HG00140_ch_T0001423;transcript_name=HG00140_ch_T0001423;gene_name=ENSG00000251618;ID=intron:HG00140_ch_T0001423:0;Name=ENSG00000251618;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22014100	22014184	.	+	.	source_transcript=ENST00000509611.1;source_transcript_name=ENST00000509611;source_gene=ENSG00000251618.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000251618.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509611.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509611.1;transcript_score=299.86199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251618;transcript_id=HG00140_ch_T0001423;gene_id=HG00140_ch_G0000461;Parent=HG00140_ch_T0001423;transcript_name=HG00140_ch_T0001423;gene_name=ENSG00000251618;ID=exon:HG00140_ch_T0001423:1;Name=ENSG00000251618;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22014185	22014428	.	+	.	source_transcript=ENST00000509611.1;source_transcript_name=ENST00000509611;source_gene=ENSG00000251618.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000251618.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509611.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509611.1;transcript_score=299.86199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251618;transcript_id=HG00140_ch_T0001423;gene_id=HG00140_ch_G0000461;Parent=HG00140_ch_T0001423;transcript_name=HG00140_ch_T0001423;gene_name=ENSG00000251618;ID=intron:HG00140_ch_T0001423:1;Name=ENSG00000251618;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22014429	22014507	.	+	.	source_transcript=ENST00000509611.1;source_transcript_name=ENST00000509611;source_gene=ENSG00000251618.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000251618.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509611.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509611.1;transcript_score=299.86199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251618;transcript_id=HG00140_ch_T0001423;gene_id=HG00140_ch_G0000461;Parent=HG00140_ch_T0001423;transcript_name=HG00140_ch_T0001423;gene_name=ENSG00000251618;ID=exon:HG00140_ch_T0001423:2;Name=ENSG00000251618;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22014508	22014592	.	+	.	source_transcript=ENST00000509611.1;source_transcript_name=ENST00000509611;source_gene=ENSG00000251618.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000251618.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509611.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509611.1;transcript_score=299.86199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251618;transcript_id=HG00140_ch_T0001423;gene_id=HG00140_ch_G0000461;Parent=HG00140_ch_T0001423;transcript_name=HG00140_ch_T0001423;gene_name=ENSG00000251618;ID=intron:HG00140_ch_T0001423:2;Name=ENSG00000251618;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22014593	22014724	.	+	.	source_transcript=ENST00000509611.1;source_transcript_name=ENST00000509611;source_gene=ENSG00000251618.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000251618.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509611.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509611.1;transcript_score=299.86199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251618;transcript_id=HG00140_ch_T0001423;gene_id=HG00140_ch_G0000461;Parent=HG00140_ch_T0001423;transcript_name=HG00140_ch_T0001423;gene_name=ENSG00000251618;ID=exon:HG00140_ch_T0001423:3;Name=ENSG00000251618;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22014725	22014841	.	+	.	source_transcript=ENST00000509611.1;source_transcript_name=ENST00000509611;source_gene=ENSG00000251618.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000251618.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509611.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509611.1;transcript_score=299.86199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251618;transcript_id=HG00140_ch_T0001423;gene_id=HG00140_ch_G0000461;Parent=HG00140_ch_T0001423;transcript_name=HG00140_ch_T0001423;gene_name=ENSG00000251618;ID=intron:HG00140_ch_T0001423:3;Name=ENSG00000251618;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22014842	22014883	.	+	.	source_transcript=ENST00000509611.1;source_transcript_name=ENST00000509611;source_gene=ENSG00000251618.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000251618.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509611.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509611.1;transcript_score=299.86199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000251618;transcript_id=HG00140_ch_T0001423;gene_id=HG00140_ch_G0000461;Parent=HG00140_ch_T0001423;transcript_name=HG00140_ch_T0001423;gene_name=ENSG00000251618;ID=exon:HG00140_ch_T0001423:4;Name=ENSG00000251618;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	22020942	22035391	.	-	.	source_gene_common_name=RBMY1B;source_gene=ENSG00000242875.7;gene_id=HG00140_ch_G0000462;gene_biotype=protein_coding;gene_name=RBMY1B;gene_sources=liftoff;ID=HG00140_ch_G0000462;Name=RBMY1B
HG00140_chrY	CAT	transcript	22020942	22035391	100	-	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001424;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_G0000462;transcript_name=HG00140_ch_T0001424;gene_name=RBMY1B;ID=HG00140_ch_T0001424;Name=RBMY1B
HG00140_chrY	CAT	exon	22020942	22021518	.	-	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001424;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001424;transcript_name=HG00140_ch_T0001424;gene_name=RBMY1B;ID=exon:HG00140_ch_T0001424:0;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22021220	22021518	.	-	2	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001424;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001424;transcript_name=HG00140_ch_T0001424;gene_name=RBMY1B;ID=CDS:HG00140_ch_T0001424:0;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	22021220	22021222	.	-	0	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001424;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001424;transcript_name=HG00140_ch_T0001424;gene_name=RBMY1B;ID=stop_codon:HG00140_ch_T0001424;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22021519	22021929	.	-	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001424;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001424;transcript_name=HG00140_ch_T0001424;gene_name=RBMY1B;ID=intron:HG00140_ch_T0001424:0;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22021930	22022018	.	-	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001424;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001424;transcript_name=HG00140_ch_T0001424;gene_name=RBMY1B;ID=exon:HG00140_ch_T0001424:1;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22021930	22022018	.	-	1	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001424;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001424;transcript_name=HG00140_ch_T0001424;gene_name=RBMY1B;ID=CDS:HG00140_ch_T0001424:1;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22022019	22022104	.	-	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001424;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001424;transcript_name=HG00140_ch_T0001424;gene_name=RBMY1B;ID=intron:HG00140_ch_T0001424:1;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22022105	22022215	.	-	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001424;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001424;transcript_name=HG00140_ch_T0001424;gene_name=RBMY1B;ID=exon:HG00140_ch_T0001424:2;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22022105	22022215	.	-	1	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001424;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001424;transcript_name=HG00140_ch_T0001424;gene_name=RBMY1B;ID=CDS:HG00140_ch_T0001424:2;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22022216	22023136	.	-	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001424;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001424;transcript_name=HG00140_ch_T0001424;gene_name=RBMY1B;ID=intron:HG00140_ch_T0001424:2;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22023137	22023247	.	-	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001424;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001424;transcript_name=HG00140_ch_T0001424;gene_name=RBMY1B;ID=exon:HG00140_ch_T0001424:3;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22023137	22023247	.	-	1	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001424;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001424;transcript_name=HG00140_ch_T0001424;gene_name=RBMY1B;ID=CDS:HG00140_ch_T0001424:3;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22023248	22023681	.	-	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001424;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001424;transcript_name=HG00140_ch_T0001424;gene_name=RBMY1B;ID=intron:HG00140_ch_T0001424:3;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22023682	22023792	.	-	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001424;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001424;transcript_name=HG00140_ch_T0001424;gene_name=RBMY1B;ID=exon:HG00140_ch_T0001424:4;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22023682	22023792	.	-	1	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001424;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001424;transcript_name=HG00140_ch_T0001424;gene_name=RBMY1B;ID=CDS:HG00140_ch_T0001424:4;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22023793	22024233	.	-	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001424;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001424;transcript_name=HG00140_ch_T0001424;gene_name=RBMY1B;ID=intron:HG00140_ch_T0001424:4;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22024234	22024344	.	-	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001424;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001424;transcript_name=HG00140_ch_T0001424;gene_name=RBMY1B;ID=exon:HG00140_ch_T0001424:5;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22024234	22024344	.	-	1	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001424;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001424;transcript_name=HG00140_ch_T0001424;gene_name=RBMY1B;ID=CDS:HG00140_ch_T0001424:5;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22024345	22025299	.	-	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001424;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001424;transcript_name=HG00140_ch_T0001424;gene_name=RBMY1B;ID=intron:HG00140_ch_T0001424:5;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22025300	22025414	.	-	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001424;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001424;transcript_name=HG00140_ch_T0001424;gene_name=RBMY1B;ID=exon:HG00140_ch_T0001424:6;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22025300	22025414	.	-	2	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001424;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001424;transcript_name=HG00140_ch_T0001424;gene_name=RBMY1B;ID=CDS:HG00140_ch_T0001424:6;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22025415	22027424	.	-	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001424;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001424;transcript_name=HG00140_ch_T0001424;gene_name=RBMY1B;ID=intron:HG00140_ch_T0001424:6;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22027425	22027577	.	-	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001424;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001424;transcript_name=HG00140_ch_T0001424;gene_name=RBMY1B;ID=exon:HG00140_ch_T0001424:7;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22027425	22027577	.	-	2	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001424;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001424;transcript_name=HG00140_ch_T0001424;gene_name=RBMY1B;ID=CDS:HG00140_ch_T0001424:7;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22027578	22029492	.	-	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001424;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001424;transcript_name=HG00140_ch_T0001424;gene_name=RBMY1B;ID=intron:HG00140_ch_T0001424:7;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22029493	22029670	.	-	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001424;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001424;transcript_name=HG00140_ch_T0001424;gene_name=RBMY1B;ID=exon:HG00140_ch_T0001424:8;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22029493	22029670	.	-	0	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001424;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001424;transcript_name=HG00140_ch_T0001424;gene_name=RBMY1B;ID=CDS:HG00140_ch_T0001424:8;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22029671	22032689	.	-	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001424;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001424;transcript_name=HG00140_ch_T0001424;gene_name=RBMY1B;ID=intron:HG00140_ch_T0001424:8;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22032690	22032793	.	-	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001424;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001424;transcript_name=HG00140_ch_T0001424;gene_name=RBMY1B;ID=exon:HG00140_ch_T0001424:9;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22032690	22032793	.	-	2	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001424;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001424;transcript_name=HG00140_ch_T0001424;gene_name=RBMY1B;ID=CDS:HG00140_ch_T0001424:9;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22032794	22033269	.	-	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001424;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001424;transcript_name=HG00140_ch_T0001424;gene_name=RBMY1B;ID=intron:HG00140_ch_T0001424:9;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22033270	22033382	.	-	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001424;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001424;transcript_name=HG00140_ch_T0001424;gene_name=RBMY1B;ID=exon:HG00140_ch_T0001424:10;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22033270	22033378	.	-	0	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001424;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001424;transcript_name=HG00140_ch_T0001424;gene_name=RBMY1B;ID=CDS:HG00140_ch_T0001424:10;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	22033376	22033378	.	-	0	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001424;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001424;transcript_name=HG00140_ch_T0001424;gene_name=RBMY1B;ID=start_codon:HG00140_ch_T0001424;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22033383	22035243	.	-	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001424;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001424;transcript_name=HG00140_ch_T0001424;gene_name=RBMY1B;ID=intron:HG00140_ch_T0001424:10;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22035244	22035391	.	-	.	source_transcript=ENST00000383020.7;source_transcript_name=RBMY1B-202;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000383020.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000383020.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001424;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001424;transcript_name=HG00140_ch_T0001424;gene_name=RBMY1B;ID=exon:HG00140_ch_T0001424:11;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	22020942	22035366	1000	-	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.825;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001425;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_G0000462;transcript_name=HG00140_ch_T0001425;gene_name=RBMY1B;ID=HG00140_ch_T0001425;Name=RBMY1B
HG00140_chrY	CAT	exon	22020942	22021518	.	-	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001425;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001425;transcript_name=HG00140_ch_T0001425;gene_name=RBMY1B;ID=exon:HG00140_ch_T0001425:0;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22021519	22021929	.	-	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001425;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001425;transcript_name=HG00140_ch_T0001425;gene_name=RBMY1B;ID=intron:HG00140_ch_T0001425:0;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22021930	22022018	.	-	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001425;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001425;transcript_name=HG00140_ch_T0001425;gene_name=RBMY1B;ID=exon:HG00140_ch_T0001425:1;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22022019	22022104	.	-	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001425;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001425;transcript_name=HG00140_ch_T0001425;gene_name=RBMY1B;ID=intron:HG00140_ch_T0001425:1;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22022105	22022215	.	-	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001425;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001425;transcript_name=HG00140_ch_T0001425;gene_name=RBMY1B;ID=exon:HG00140_ch_T0001425:2;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22022216	22023136	.	-	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001425;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001425;transcript_name=HG00140_ch_T0001425;gene_name=RBMY1B;ID=intron:HG00140_ch_T0001425:2;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22023137	22023247	.	-	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001425;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001425;transcript_name=HG00140_ch_T0001425;gene_name=RBMY1B;ID=exon:HG00140_ch_T0001425:3;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22023248	22023681	.	-	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001425;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001425;transcript_name=HG00140_ch_T0001425;gene_name=RBMY1B;ID=intron:HG00140_ch_T0001425:3;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22023682	22023792	.	-	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001425;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001425;transcript_name=HG00140_ch_T0001425;gene_name=RBMY1B;ID=exon:HG00140_ch_T0001425:4;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22023793	22024233	.	-	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001425;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001425;transcript_name=HG00140_ch_T0001425;gene_name=RBMY1B;ID=intron:HG00140_ch_T0001425:4;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22024234	22024344	.	-	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001425;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001425;transcript_name=HG00140_ch_T0001425;gene_name=RBMY1B;ID=exon:HG00140_ch_T0001425:5;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22024345	22025299	.	-	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001425;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001425;transcript_name=HG00140_ch_T0001425;gene_name=RBMY1B;ID=intron:HG00140_ch_T0001425:5;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22025300	22025414	.	-	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001425;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001425;transcript_name=HG00140_ch_T0001425;gene_name=RBMY1B;ID=exon:HG00140_ch_T0001425:6;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22025415	22027424	.	-	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001425;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001425;transcript_name=HG00140_ch_T0001425;gene_name=RBMY1B;ID=intron:HG00140_ch_T0001425:6;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22027425	22027577	.	-	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001425;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001425;transcript_name=HG00140_ch_T0001425;gene_name=RBMY1B;ID=exon:HG00140_ch_T0001425:7;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22027545	22027577	.	-	0	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001425;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001425;transcript_name=HG00140_ch_T0001425;gene_name=RBMY1B;ID=CDS:HG00140_ch_T0001425:0;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	22027545	22027547	.	-	0	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001425;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001425;transcript_name=HG00140_ch_T0001425;gene_name=RBMY1B;ID=stop_codon:HG00140_ch_T0001425;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22027578	22032689	.	-	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001425;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001425;transcript_name=HG00140_ch_T0001425;gene_name=RBMY1B;ID=intron:HG00140_ch_T0001425:7;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22032690	22032793	.	-	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001425;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001425;transcript_name=HG00140_ch_T0001425;gene_name=RBMY1B;ID=exon:HG00140_ch_T0001425:8;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22032690	22032793	.	-	2	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001425;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001425;transcript_name=HG00140_ch_T0001425;gene_name=RBMY1B;ID=CDS:HG00140_ch_T0001425:1;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22032794	22033269	.	-	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001425;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001425;transcript_name=HG00140_ch_T0001425;gene_name=RBMY1B;ID=intron:HG00140_ch_T0001425:8;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22033270	22033382	.	-	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001425;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001425;transcript_name=HG00140_ch_T0001425;gene_name=RBMY1B;ID=exon:HG00140_ch_T0001425:9;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22033270	22033378	.	-	0	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001425;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001425;transcript_name=HG00140_ch_T0001425;gene_name=RBMY1B;ID=CDS:HG00140_ch_T0001425:2;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	22033376	22033378	.	-	0	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001425;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001425;transcript_name=HG00140_ch_T0001425;gene_name=RBMY1B;ID=start_codon:HG00140_ch_T0001425;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22033383	22035243	.	-	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001425;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001425;transcript_name=HG00140_ch_T0001425;gene_name=RBMY1B;ID=intron:HG00140_ch_T0001425:9;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22035244	22035366	.	-	.	source_transcript=ENST00000382639.7;source_transcript_name=RBMY1B-201;source_gene=ENSG00000242875.7;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242875.7;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000382639.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382639.7;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1B;transcript_id=HG00140_ch_T0001425;gene_id=HG00140_ch_G0000462;Parent=HG00140_ch_T0001425;transcript_name=HG00140_ch_T0001425;gene_name=RBMY1B;ID=exon:HG00140_ch_T0001425:10;Name=RBMY1B;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	22036259	22038430	.	+	.	source_gene_common_name=ENSG00000242393;source_gene=ENSG00000242393.1;gene_id=HG00140_ch_G0000463;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000242393;gene_sources=liftoff;ID=HG00140_ch_G0000463;Name=ENSG00000242393
HG00140_chrY	CAT	transcript	22036259	22038430	1000	+	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;transcript_id=HG00140_ch_T0001426;gene_id=HG00140_ch_G0000463;Parent=HG00140_ch_G0000463;transcript_name=HG00140_ch_T0001426;gene_name=ENSG00000242393;ID=HG00140_ch_T0001426;Name=ENSG00000242393
HG00140_chrY	CAT	exon	22036259	22036651	.	+	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;transcript_id=HG00140_ch_T0001426;gene_id=HG00140_ch_G0000463;Parent=HG00140_ch_T0001426;transcript_name=HG00140_ch_T0001426;gene_name=ENSG00000242393;ID=exon:HG00140_ch_T0001426:0;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22036652	22037640	.	+	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;transcript_id=HG00140_ch_T0001426;gene_id=HG00140_ch_G0000463;Parent=HG00140_ch_T0001426;transcript_name=HG00140_ch_T0001426;gene_name=ENSG00000242393;ID=intron:HG00140_ch_T0001426:0;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22037641	22037706	.	+	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;transcript_id=HG00140_ch_T0001426;gene_id=HG00140_ch_G0000463;Parent=HG00140_ch_T0001426;transcript_name=HG00140_ch_T0001426;gene_name=ENSG00000242393;ID=exon:HG00140_ch_T0001426:1;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22037707	22037969	.	+	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;transcript_id=HG00140_ch_T0001426;gene_id=HG00140_ch_G0000463;Parent=HG00140_ch_T0001426;transcript_name=HG00140_ch_T0001426;gene_name=ENSG00000242393;ID=intron:HG00140_ch_T0001426:1;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22037970	22038033	.	+	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;transcript_id=HG00140_ch_T0001426;gene_id=HG00140_ch_G0000463;Parent=HG00140_ch_T0001426;transcript_name=HG00140_ch_T0001426;gene_name=ENSG00000242393;ID=exon:HG00140_ch_T0001426:2;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22038034	22038119	.	+	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;transcript_id=HG00140_ch_T0001426;gene_id=HG00140_ch_G0000463;Parent=HG00140_ch_T0001426;transcript_name=HG00140_ch_T0001426;gene_name=ENSG00000242393;ID=intron:HG00140_ch_T0001426:2;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22038120	22038265	.	+	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;transcript_id=HG00140_ch_T0001426;gene_id=HG00140_ch_G0000463;Parent=HG00140_ch_T0001426;transcript_name=HG00140_ch_T0001426;gene_name=ENSG00000242393;ID=exon:HG00140_ch_T0001426:3;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22038266	22038382	.	+	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;transcript_id=HG00140_ch_T0001426;gene_id=HG00140_ch_G0000463;Parent=HG00140_ch_T0001426;transcript_name=HG00140_ch_T0001426;gene_name=ENSG00000242393;ID=intron:HG00140_ch_T0001426:3;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22038383	22038430	.	+	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;transcript_id=HG00140_ch_T0001426;gene_id=HG00140_ch_G0000463;Parent=HG00140_ch_T0001426;transcript_name=HG00140_ch_T0001426;gene_name=ENSG00000242393;ID=exon:HG00140_ch_T0001426:4;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	22044483	22058905	.	-	.	source_gene_common_name=RBMY1E;source_gene=ENSG00000242389.9;gene_id=HG00140_ch_G0000464;gene_biotype=protein_coding;gene_name=RBMY1E;gene_sources=liftoff;ID=HG00140_ch_G0000464;Name=RBMY1E
HG00140_chrY	CAT	transcript	22044483	22058905	1000	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=299.825;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001427;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_G0000464;transcript_name=HG00140_ch_T0001427;gene_name=RBMY1E;ID=HG00140_ch_T0001427;Name=RBMY1E
HG00140_chrY	CAT	exon	22044483	22045059	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001427;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001427;transcript_name=HG00140_ch_T0001427;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001427:0;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22045060	22045470	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001427;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001427;transcript_name=HG00140_ch_T0001427;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001427:0;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22045471	22045559	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001427;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001427;transcript_name=HG00140_ch_T0001427;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001427:1;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22045560	22045645	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001427;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001427;transcript_name=HG00140_ch_T0001427;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001427:1;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22045646	22045756	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001427;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001427;transcript_name=HG00140_ch_T0001427;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001427:2;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22045757	22046677	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001427;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001427;transcript_name=HG00140_ch_T0001427;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001427:2;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22046678	22046788	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001427;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001427;transcript_name=HG00140_ch_T0001427;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001427:3;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22046789	22047222	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001427;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001427;transcript_name=HG00140_ch_T0001427;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001427:3;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22047223	22047333	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001427;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001427;transcript_name=HG00140_ch_T0001427;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001427:4;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22047334	22047774	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001427;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001427;transcript_name=HG00140_ch_T0001427;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001427:4;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22047775	22047885	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001427;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001427;transcript_name=HG00140_ch_T0001427;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001427:5;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22047886	22048840	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001427;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001427;transcript_name=HG00140_ch_T0001427;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001427:5;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22048841	22048955	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001427;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001427;transcript_name=HG00140_ch_T0001427;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001427:6;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22048956	22050965	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001427;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001427;transcript_name=HG00140_ch_T0001427;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001427:6;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22050966	22051118	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001427;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001427;transcript_name=HG00140_ch_T0001427;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001427:7;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22051086	22051118	.	-	0	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001427;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001427;transcript_name=HG00140_ch_T0001427;gene_name=RBMY1E;ID=CDS:HG00140_ch_T0001427:0;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	22051086	22051088	.	-	0	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001427;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001427;transcript_name=HG00140_ch_T0001427;gene_name=RBMY1E;ID=stop_codon:HG00140_ch_T0001427;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22051119	22056230	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001427;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001427;transcript_name=HG00140_ch_T0001427;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001427:7;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22056231	22056334	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001427;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001427;transcript_name=HG00140_ch_T0001427;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001427:8;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22056231	22056334	.	-	2	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001427;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001427;transcript_name=HG00140_ch_T0001427;gene_name=RBMY1E;ID=CDS:HG00140_ch_T0001427:1;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22056335	22056808	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001427;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001427;transcript_name=HG00140_ch_T0001427;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001427:8;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22056809	22056921	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001427;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001427;transcript_name=HG00140_ch_T0001427;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001427:9;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22056809	22056917	.	-	0	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001427;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001427;transcript_name=HG00140_ch_T0001427;gene_name=RBMY1E;ID=CDS:HG00140_ch_T0001427:2;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	22056915	22056917	.	-	0	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001427;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001427;transcript_name=HG00140_ch_T0001427;gene_name=RBMY1E;ID=start_codon:HG00140_ch_T0001427;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22056922	22058782	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001427;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001427;transcript_name=HG00140_ch_T0001427;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001427:9;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22058783	22058905	.	-	.	source_transcript=ENST00000358944.8;source_transcript_name=RBMY1E-201;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000358944.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000358944.8;transcript_score=299.825;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001427;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001427;transcript_name=HG00140_ch_T0001427;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001427:10;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	22044485	22058895	100	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001428;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_G0000464;transcript_name=HG00140_ch_T0001428;gene_name=RBMY1E;ID=HG00140_ch_T0001428;Name=RBMY1E
HG00140_chrY	CAT	exon	22044485	22045059	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001428;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001428;transcript_name=HG00140_ch_T0001428;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001428:0;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22044761	22045059	.	-	2	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001428;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001428;transcript_name=HG00140_ch_T0001428;gene_name=RBMY1E;ID=CDS:HG00140_ch_T0001428:0;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	22044761	22044763	.	-	0	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001428;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001428;transcript_name=HG00140_ch_T0001428;gene_name=RBMY1E;ID=stop_codon:HG00140_ch_T0001428;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22045060	22045470	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001428;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001428;transcript_name=HG00140_ch_T0001428;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001428:0;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22045471	22045559	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001428;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001428;transcript_name=HG00140_ch_T0001428;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001428:1;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22045471	22045559	.	-	1	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001428;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001428;transcript_name=HG00140_ch_T0001428;gene_name=RBMY1E;ID=CDS:HG00140_ch_T0001428:1;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22045560	22046677	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001428;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001428;transcript_name=HG00140_ch_T0001428;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001428:1;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22046678	22046788	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001428;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001428;transcript_name=HG00140_ch_T0001428;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001428:2;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22046678	22046788	.	-	1	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001428;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001428;transcript_name=HG00140_ch_T0001428;gene_name=RBMY1E;ID=CDS:HG00140_ch_T0001428:2;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22046789	22047222	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001428;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001428;transcript_name=HG00140_ch_T0001428;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001428:2;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22047223	22047333	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001428;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001428;transcript_name=HG00140_ch_T0001428;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001428:3;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22047223	22047333	.	-	1	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001428;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001428;transcript_name=HG00140_ch_T0001428;gene_name=RBMY1E;ID=CDS:HG00140_ch_T0001428:3;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22047334	22047774	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001428;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001428;transcript_name=HG00140_ch_T0001428;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001428:3;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22047775	22047885	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001428;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001428;transcript_name=HG00140_ch_T0001428;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001428:4;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22047775	22047885	.	-	1	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001428;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001428;transcript_name=HG00140_ch_T0001428;gene_name=RBMY1E;ID=CDS:HG00140_ch_T0001428:4;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22047886	22048840	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001428;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001428;transcript_name=HG00140_ch_T0001428;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001428:4;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22048841	22048955	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001428;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001428;transcript_name=HG00140_ch_T0001428;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001428:5;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22048841	22048955	.	-	2	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001428;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001428;transcript_name=HG00140_ch_T0001428;gene_name=RBMY1E;ID=CDS:HG00140_ch_T0001428:5;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22048956	22050965	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001428;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001428;transcript_name=HG00140_ch_T0001428;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001428:5;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22050966	22051118	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001428;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001428;transcript_name=HG00140_ch_T0001428;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001428:6;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22050966	22051118	.	-	2	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001428;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001428;transcript_name=HG00140_ch_T0001428;gene_name=RBMY1E;ID=CDS:HG00140_ch_T0001428:6;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22051119	22053033	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001428;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001428;transcript_name=HG00140_ch_T0001428;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001428:6;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22053034	22053211	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001428;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001428;transcript_name=HG00140_ch_T0001428;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001428:7;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22053034	22053211	.	-	0	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001428;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001428;transcript_name=HG00140_ch_T0001428;gene_name=RBMY1E;ID=CDS:HG00140_ch_T0001428:7;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22053212	22056230	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001428;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001428;transcript_name=HG00140_ch_T0001428;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001428:7;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22056231	22056334	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001428;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001428;transcript_name=HG00140_ch_T0001428;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001428:8;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22056231	22056334	.	-	2	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001428;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001428;transcript_name=HG00140_ch_T0001428;gene_name=RBMY1E;ID=CDS:HG00140_ch_T0001428:8;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22056335	22056808	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001428;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001428;transcript_name=HG00140_ch_T0001428;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001428:8;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22056809	22056921	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001428;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001428;transcript_name=HG00140_ch_T0001428;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001428:9;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22056809	22056917	.	-	0	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001428;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001428;transcript_name=HG00140_ch_T0001428;gene_name=RBMY1E;ID=CDS:HG00140_ch_T0001428:9;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	22056915	22056917	.	-	0	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001428;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001428;transcript_name=HG00140_ch_T0001428;gene_name=RBMY1E;ID=start_codon:HG00140_ch_T0001428;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22056922	22058782	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001428;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001428;transcript_name=HG00140_ch_T0001428;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001428:9;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22058783	22058895	.	-	.	source_transcript=ENST00000382658.5;source_transcript_name=RBMY1E-202;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382658.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382658.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001428;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001428;transcript_name=HG00140_ch_T0001428;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001428:10;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	22044487	22058895	100	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001429;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_G0000464;transcript_name=HG00140_ch_T0001429;gene_name=RBMY1E;ID=HG00140_ch_T0001429;Name=RBMY1E
HG00140_chrY	CAT	exon	22044487	22045059	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001429;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001429;transcript_name=HG00140_ch_T0001429;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001429:0;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22044761	22045059	.	-	2	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001429;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001429;transcript_name=HG00140_ch_T0001429;gene_name=RBMY1E;ID=CDS:HG00140_ch_T0001429:0;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	22044761	22044763	.	-	0	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001429;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001429;transcript_name=HG00140_ch_T0001429;gene_name=RBMY1E;ID=stop_codon:HG00140_ch_T0001429;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22045060	22045470	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001429;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001429;transcript_name=HG00140_ch_T0001429;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001429:0;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22045471	22045559	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001429;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001429;transcript_name=HG00140_ch_T0001429;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001429:1;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22045471	22045559	.	-	1	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001429;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001429;transcript_name=HG00140_ch_T0001429;gene_name=RBMY1E;ID=CDS:HG00140_ch_T0001429:1;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22045560	22045645	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001429;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001429;transcript_name=HG00140_ch_T0001429;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001429:1;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22045646	22045756	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001429;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001429;transcript_name=HG00140_ch_T0001429;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001429:2;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22045646	22045756	.	-	1	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001429;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001429;transcript_name=HG00140_ch_T0001429;gene_name=RBMY1E;ID=CDS:HG00140_ch_T0001429:2;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22045757	22046677	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001429;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001429;transcript_name=HG00140_ch_T0001429;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001429:2;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22046678	22046788	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001429;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001429;transcript_name=HG00140_ch_T0001429;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001429:3;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22046678	22046788	.	-	1	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001429;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001429;transcript_name=HG00140_ch_T0001429;gene_name=RBMY1E;ID=CDS:HG00140_ch_T0001429:3;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22046789	22047222	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001429;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001429;transcript_name=HG00140_ch_T0001429;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001429:3;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22047223	22047333	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001429;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001429;transcript_name=HG00140_ch_T0001429;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001429:4;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22047223	22047333	.	-	1	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001429;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001429;transcript_name=HG00140_ch_T0001429;gene_name=RBMY1E;ID=CDS:HG00140_ch_T0001429:4;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22047334	22047774	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001429;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001429;transcript_name=HG00140_ch_T0001429;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001429:4;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22047775	22047885	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001429;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001429;transcript_name=HG00140_ch_T0001429;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001429:5;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22047775	22047885	.	-	1	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001429;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001429;transcript_name=HG00140_ch_T0001429;gene_name=RBMY1E;ID=CDS:HG00140_ch_T0001429:5;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22047886	22048840	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001429;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001429;transcript_name=HG00140_ch_T0001429;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001429:5;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22048841	22048955	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001429;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001429;transcript_name=HG00140_ch_T0001429;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001429:6;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22048841	22048955	.	-	2	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001429;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001429;transcript_name=HG00140_ch_T0001429;gene_name=RBMY1E;ID=CDS:HG00140_ch_T0001429:6;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22048956	22050965	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001429;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001429;transcript_name=HG00140_ch_T0001429;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001429:6;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22050966	22051118	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001429;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001429;transcript_name=HG00140_ch_T0001429;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001429:7;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22050966	22051118	.	-	2	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001429;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001429;transcript_name=HG00140_ch_T0001429;gene_name=RBMY1E;ID=CDS:HG00140_ch_T0001429:7;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22051119	22053033	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001429;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001429;transcript_name=HG00140_ch_T0001429;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001429:7;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22053034	22053211	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001429;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001429;transcript_name=HG00140_ch_T0001429;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001429:8;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22053034	22053211	.	-	0	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001429;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001429;transcript_name=HG00140_ch_T0001429;gene_name=RBMY1E;ID=CDS:HG00140_ch_T0001429:8;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22053212	22056230	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001429;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001429;transcript_name=HG00140_ch_T0001429;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001429:8;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22056231	22056334	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001429;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001429;transcript_name=HG00140_ch_T0001429;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001429:9;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22056231	22056334	.	-	2	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001429;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001429;transcript_name=HG00140_ch_T0001429;gene_name=RBMY1E;ID=CDS:HG00140_ch_T0001429:9;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22056335	22056808	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001429;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001429;transcript_name=HG00140_ch_T0001429;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001429:9;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22056809	22056921	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001429;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001429;transcript_name=HG00140_ch_T0001429;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001429:10;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22056809	22056917	.	-	0	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001429;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001429;transcript_name=HG00140_ch_T0001429;gene_name=RBMY1E;ID=CDS:HG00140_ch_T0001429:10;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	22056915	22056917	.	-	0	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001429;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001429;transcript_name=HG00140_ch_T0001429;gene_name=RBMY1E;ID=start_codon:HG00140_ch_T0001429;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22056922	22058782	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001429;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001429;transcript_name=HG00140_ch_T0001429;gene_name=RBMY1E;ID=intron:HG00140_ch_T0001429:10;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22058783	22058895	.	-	.	source_transcript=ENST00000382659.7;source_transcript_name=RBMY1E-203;source_gene=ENSG00000242389.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000242389.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382659.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382659.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;transcript_id=HG00140_ch_T0001429;gene_id=HG00140_ch_G0000464;Parent=HG00140_ch_T0001429;transcript_name=HG00140_ch_T0001429;gene_name=RBMY1E;ID=exon:HG00140_ch_T0001429:11;Name=RBMY1E;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	22059798	22061969	.	+	.	source_gene_common_name=ENSG00000242393;source_gene=ENSG00000242393.1;gene_id=HG00140_ch_G0000465;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000242393;gene_sources=liftoff;ID=HG00140_ch_G0000465;Name=ENSG00000242393
HG00140_chrY	CAT	transcript	22059798	22061969	1000	+	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;transcript_id=HG00140_ch_T0001430;gene_id=HG00140_ch_G0000465;Parent=HG00140_ch_G0000465;transcript_name=HG00140_ch_T0001430;gene_name=ENSG00000242393;ID=HG00140_ch_T0001430;Name=ENSG00000242393
HG00140_chrY	CAT	exon	22059798	22060190	.	+	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;transcript_id=HG00140_ch_T0001430;gene_id=HG00140_ch_G0000465;Parent=HG00140_ch_T0001430;transcript_name=HG00140_ch_T0001430;gene_name=ENSG00000242393;ID=exon:HG00140_ch_T0001430:0;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22060191	22061179	.	+	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;transcript_id=HG00140_ch_T0001430;gene_id=HG00140_ch_G0000465;Parent=HG00140_ch_T0001430;transcript_name=HG00140_ch_T0001430;gene_name=ENSG00000242393;ID=intron:HG00140_ch_T0001430:0;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22061180	22061245	.	+	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;transcript_id=HG00140_ch_T0001430;gene_id=HG00140_ch_G0000465;Parent=HG00140_ch_T0001430;transcript_name=HG00140_ch_T0001430;gene_name=ENSG00000242393;ID=exon:HG00140_ch_T0001430:1;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22061246	22061508	.	+	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;transcript_id=HG00140_ch_T0001430;gene_id=HG00140_ch_G0000465;Parent=HG00140_ch_T0001430;transcript_name=HG00140_ch_T0001430;gene_name=ENSG00000242393;ID=intron:HG00140_ch_T0001430:1;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22061509	22061572	.	+	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;transcript_id=HG00140_ch_T0001430;gene_id=HG00140_ch_G0000465;Parent=HG00140_ch_T0001430;transcript_name=HG00140_ch_T0001430;gene_name=ENSG00000242393;ID=exon:HG00140_ch_T0001430:2;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22061573	22061658	.	+	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;transcript_id=HG00140_ch_T0001430;gene_id=HG00140_ch_G0000465;Parent=HG00140_ch_T0001430;transcript_name=HG00140_ch_T0001430;gene_name=ENSG00000242393;ID=intron:HG00140_ch_T0001430:2;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22061659	22061804	.	+	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;transcript_id=HG00140_ch_T0001430;gene_id=HG00140_ch_G0000465;Parent=HG00140_ch_T0001430;transcript_name=HG00140_ch_T0001430;gene_name=ENSG00000242393;ID=exon:HG00140_ch_T0001430:3;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22061805	22061921	.	+	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;transcript_id=HG00140_ch_T0001430;gene_id=HG00140_ch_G0000465;Parent=HG00140_ch_T0001430;transcript_name=HG00140_ch_T0001430;gene_name=ENSG00000242393;ID=intron:HG00140_ch_T0001430:3;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22061922	22061969	.	+	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;transcript_id=HG00140_ch_T0001430;gene_id=HG00140_ch_G0000465;Parent=HG00140_ch_T0001430;transcript_name=HG00140_ch_T0001430;gene_name=ENSG00000242393;ID=exon:HG00140_ch_T0001430:4;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	22068022	22082469	.	-	.	source_gene_common_name=RBMY1A1;source_gene=ENSG00000234414.8;gene_id=HG00140_ch_G0000466;gene_biotype=protein_coding;gene_name=RBMY1A1;gene_sources=liftoff;ID=HG00140_ch_G0000466;Name=RBMY1A1
HG00140_chrY	CAT	transcript	22068022	22082469	100	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001431;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_G0000466;transcript_name=HG00140_ch_T0001431;gene_name=RBMY1A1;ID=HG00140_ch_T0001431;Name=RBMY1A1
HG00140_chrY	CAT	exon	22068022	22068598	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001431;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001431;transcript_name=HG00140_ch_T0001431;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001431:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22068300	22068598	.	-	2	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001431;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001431;transcript_name=HG00140_ch_T0001431;gene_name=RBMY1A1;ID=CDS:HG00140_ch_T0001431:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	22068300	22068302	.	-	0	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001431;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001431;transcript_name=HG00140_ch_T0001431;gene_name=RBMY1A1;ID=stop_codon:HG00140_ch_T0001431;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22068599	22069009	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001431;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001431;transcript_name=HG00140_ch_T0001431;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001431:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22069010	22069098	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001431;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001431;transcript_name=HG00140_ch_T0001431;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001431:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22069010	22069098	.	-	1	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001431;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001431;transcript_name=HG00140_ch_T0001431;gene_name=RBMY1A1;ID=CDS:HG00140_ch_T0001431:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22069099	22069184	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001431;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001431;transcript_name=HG00140_ch_T0001431;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001431:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22069185	22069295	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001431;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001431;transcript_name=HG00140_ch_T0001431;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001431:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22069185	22069295	.	-	1	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001431;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001431;transcript_name=HG00140_ch_T0001431;gene_name=RBMY1A1;ID=CDS:HG00140_ch_T0001431:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22069296	22070216	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001431;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001431;transcript_name=HG00140_ch_T0001431;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001431:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22070217	22070327	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001431;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001431;transcript_name=HG00140_ch_T0001431;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001431:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22070217	22070327	.	-	1	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001431;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001431;transcript_name=HG00140_ch_T0001431;gene_name=RBMY1A1;ID=CDS:HG00140_ch_T0001431:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22070328	22070761	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001431;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001431;transcript_name=HG00140_ch_T0001431;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001431:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22070762	22070872	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001431;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001431;transcript_name=HG00140_ch_T0001431;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001431:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22070762	22070872	.	-	1	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001431;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001431;transcript_name=HG00140_ch_T0001431;gene_name=RBMY1A1;ID=CDS:HG00140_ch_T0001431:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22070873	22071313	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001431;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001431;transcript_name=HG00140_ch_T0001431;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001431:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22071314	22071424	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001431;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001431;transcript_name=HG00140_ch_T0001431;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001431:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22071314	22071424	.	-	1	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001431;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001431;transcript_name=HG00140_ch_T0001431;gene_name=RBMY1A1;ID=CDS:HG00140_ch_T0001431:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22071425	22072379	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001431;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001431;transcript_name=HG00140_ch_T0001431;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001431:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22072380	22072494	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001431;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001431;transcript_name=HG00140_ch_T0001431;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001431:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22072380	22072494	.	-	2	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001431;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001431;transcript_name=HG00140_ch_T0001431;gene_name=RBMY1A1;ID=CDS:HG00140_ch_T0001431:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22072495	22074504	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001431;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001431;transcript_name=HG00140_ch_T0001431;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001431:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22074505	22074657	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001431;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001431;transcript_name=HG00140_ch_T0001431;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001431:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22074505	22074657	.	-	2	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001431;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001431;transcript_name=HG00140_ch_T0001431;gene_name=RBMY1A1;ID=CDS:HG00140_ch_T0001431:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22074658	22076572	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001431;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001431;transcript_name=HG00140_ch_T0001431;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001431:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22076573	22076750	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001431;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001431;transcript_name=HG00140_ch_T0001431;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001431:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22076573	22076750	.	-	0	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001431;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001431;transcript_name=HG00140_ch_T0001431;gene_name=RBMY1A1;ID=CDS:HG00140_ch_T0001431:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22076751	22079769	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001431;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001431;transcript_name=HG00140_ch_T0001431;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001431:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22079770	22079873	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001431;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001431;transcript_name=HG00140_ch_T0001431;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001431:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22079770	22079873	.	-	2	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001431;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001431;transcript_name=HG00140_ch_T0001431;gene_name=RBMY1A1;ID=CDS:HG00140_ch_T0001431:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22079874	22080347	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001431;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001431;transcript_name=HG00140_ch_T0001431;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001431:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22080348	22080460	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001431;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001431;transcript_name=HG00140_ch_T0001431;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001431:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22080348	22080456	.	-	0	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001431;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001431;transcript_name=HG00140_ch_T0001431;gene_name=RBMY1A1;ID=CDS:HG00140_ch_T0001431:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	22080454	22080456	.	-	0	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001431;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001431;transcript_name=HG00140_ch_T0001431;gene_name=RBMY1A1;ID=start_codon:HG00140_ch_T0001431;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22080461	22082321	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001431;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001431;transcript_name=HG00140_ch_T0001431;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001431:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22082322	22082469	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001431;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001431;transcript_name=HG00140_ch_T0001431;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001431:11;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	22068022	22082444	1000	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001432;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_G0000466;transcript_name=HG00140_ch_T0001432;gene_name=RBMY1A1;ID=HG00140_ch_T0001432;Name=RBMY1A1
HG00140_chrY	CAT	exon	22068022	22068598	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001432;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001432;transcript_name=HG00140_ch_T0001432;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001432:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22068599	22069009	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001432;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001432;transcript_name=HG00140_ch_T0001432;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001432:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22069010	22069098	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001432;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001432;transcript_name=HG00140_ch_T0001432;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001432:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22069099	22069184	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001432;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001432;transcript_name=HG00140_ch_T0001432;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001432:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22069185	22069295	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001432;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001432;transcript_name=HG00140_ch_T0001432;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001432:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22069296	22070216	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001432;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001432;transcript_name=HG00140_ch_T0001432;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001432:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22070217	22070327	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001432;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001432;transcript_name=HG00140_ch_T0001432;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001432:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22070328	22070761	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001432;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001432;transcript_name=HG00140_ch_T0001432;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001432:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22070762	22070872	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001432;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001432;transcript_name=HG00140_ch_T0001432;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001432:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22070873	22071313	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001432;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001432;transcript_name=HG00140_ch_T0001432;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001432:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22071314	22071424	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001432;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001432;transcript_name=HG00140_ch_T0001432;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001432:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22071425	22072379	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001432;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001432;transcript_name=HG00140_ch_T0001432;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001432:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22072380	22072494	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001432;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001432;transcript_name=HG00140_ch_T0001432;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001432:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22072495	22074504	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001432;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001432;transcript_name=HG00140_ch_T0001432;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001432:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22074505	22074657	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001432;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001432;transcript_name=HG00140_ch_T0001432;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001432:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22074625	22074657	.	-	0	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001432;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001432;transcript_name=HG00140_ch_T0001432;gene_name=RBMY1A1;ID=CDS:HG00140_ch_T0001432:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	22074625	22074627	.	-	0	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001432;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001432;transcript_name=HG00140_ch_T0001432;gene_name=RBMY1A1;ID=stop_codon:HG00140_ch_T0001432;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22074658	22079769	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001432;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001432;transcript_name=HG00140_ch_T0001432;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001432:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22079770	22079873	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001432;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001432;transcript_name=HG00140_ch_T0001432;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001432:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22079770	22079873	.	-	2	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001432;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001432;transcript_name=HG00140_ch_T0001432;gene_name=RBMY1A1;ID=CDS:HG00140_ch_T0001432:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22079874	22080347	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001432;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001432;transcript_name=HG00140_ch_T0001432;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001432:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22080348	22080460	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001432;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001432;transcript_name=HG00140_ch_T0001432;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001432:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22080348	22080456	.	-	0	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001432;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001432;transcript_name=HG00140_ch_T0001432;gene_name=RBMY1A1;ID=CDS:HG00140_ch_T0001432:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	22080454	22080456	.	-	0	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001432;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001432;transcript_name=HG00140_ch_T0001432;gene_name=RBMY1A1;ID=start_codon:HG00140_ch_T0001432;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22080461	22082321	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001432;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001432;transcript_name=HG00140_ch_T0001432;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001432:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22082322	22082444	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001432;gene_id=HG00140_ch_G0000466;Parent=HG00140_ch_T0001432;transcript_name=HG00140_ch_T0001432;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001432:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	22083337	22085508	.	+	.	source_gene_common_name=ENSG00000242393;source_gene=ENSG00000242393.1;gene_id=HG00140_ch_G0000467;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000242393;gene_sources=liftoff;ID=HG00140_ch_G0000467;Name=ENSG00000242393
HG00140_chrY	CAT	transcript	22083337	22085508	1000	+	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;transcript_id=HG00140_ch_T0001433;gene_id=HG00140_ch_G0000467;Parent=HG00140_ch_G0000467;transcript_name=HG00140_ch_T0001433;gene_name=ENSG00000242393;ID=HG00140_ch_T0001433;Name=ENSG00000242393
HG00140_chrY	CAT	exon	22083337	22083729	.	+	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;transcript_id=HG00140_ch_T0001433;gene_id=HG00140_ch_G0000467;Parent=HG00140_ch_T0001433;transcript_name=HG00140_ch_T0001433;gene_name=ENSG00000242393;ID=exon:HG00140_ch_T0001433:0;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22083730	22084718	.	+	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;transcript_id=HG00140_ch_T0001433;gene_id=HG00140_ch_G0000467;Parent=HG00140_ch_T0001433;transcript_name=HG00140_ch_T0001433;gene_name=ENSG00000242393;ID=intron:HG00140_ch_T0001433:0;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22084719	22084784	.	+	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;transcript_id=HG00140_ch_T0001433;gene_id=HG00140_ch_G0000467;Parent=HG00140_ch_T0001433;transcript_name=HG00140_ch_T0001433;gene_name=ENSG00000242393;ID=exon:HG00140_ch_T0001433:1;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22084785	22085047	.	+	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;transcript_id=HG00140_ch_T0001433;gene_id=HG00140_ch_G0000467;Parent=HG00140_ch_T0001433;transcript_name=HG00140_ch_T0001433;gene_name=ENSG00000242393;ID=intron:HG00140_ch_T0001433:1;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22085048	22085111	.	+	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;transcript_id=HG00140_ch_T0001433;gene_id=HG00140_ch_G0000467;Parent=HG00140_ch_T0001433;transcript_name=HG00140_ch_T0001433;gene_name=ENSG00000242393;ID=exon:HG00140_ch_T0001433:2;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22085112	22085197	.	+	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;transcript_id=HG00140_ch_T0001433;gene_id=HG00140_ch_G0000467;Parent=HG00140_ch_T0001433;transcript_name=HG00140_ch_T0001433;gene_name=ENSG00000242393;ID=intron:HG00140_ch_T0001433:2;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22085198	22085343	.	+	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;transcript_id=HG00140_ch_T0001433;gene_id=HG00140_ch_G0000467;Parent=HG00140_ch_T0001433;transcript_name=HG00140_ch_T0001433;gene_name=ENSG00000242393;ID=exon:HG00140_ch_T0001433:3;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22085344	22085460	.	+	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;transcript_id=HG00140_ch_T0001433;gene_id=HG00140_ch_G0000467;Parent=HG00140_ch_T0001433;transcript_name=HG00140_ch_T0001433;gene_name=ENSG00000242393;ID=intron:HG00140_ch_T0001433:3;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22085461	22085508	.	+	.	source_transcript=ENST00000456659.1;source_transcript_name=ENST00000456659;source_gene=ENSG00000242393.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000242393.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456659.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000242393;transcript_id=HG00140_ch_T0001433;gene_id=HG00140_ch_G0000467;Parent=HG00140_ch_T0001433;transcript_name=HG00140_ch_T0001433;gene_name=ENSG00000242393;ID=exon:HG00140_ch_T0001433:4;Name=ENSG00000242393;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	22091561	22106008	.	-	.	source_gene_common_name=RBMY1A1;source_gene=ENSG00000234414.8;gene_id=HG00140_ch_G0000468;gene_biotype=protein_coding;gene_name=RBMY1A1;gene_sources=liftoff;ID=HG00140_ch_G0000468;Name=RBMY1A1
HG00140_chrY	CAT	transcript	22091561	22106008	10000	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001434;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_G0000468;transcript_name=HG00140_ch_T0001434;gene_name=RBMY1A1;ID=HG00140_ch_T0001434;Name=RBMY1A1
HG00140_chrY	CAT	exon	22091561	22092137	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001434;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001434;transcript_name=HG00140_ch_T0001434;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001434:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22091839	22092137	.	-	2	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001434;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001434;transcript_name=HG00140_ch_T0001434;gene_name=RBMY1A1;ID=CDS:HG00140_ch_T0001434:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	22091839	22091841	.	-	0	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001434;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001434;transcript_name=HG00140_ch_T0001434;gene_name=RBMY1A1;ID=stop_codon:HG00140_ch_T0001434;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22092138	22092548	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001434;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001434;transcript_name=HG00140_ch_T0001434;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001434:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22092549	22092637	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001434;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001434;transcript_name=HG00140_ch_T0001434;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001434:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22092549	22092637	.	-	1	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001434;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001434;transcript_name=HG00140_ch_T0001434;gene_name=RBMY1A1;ID=CDS:HG00140_ch_T0001434:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22092638	22092723	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001434;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001434;transcript_name=HG00140_ch_T0001434;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001434:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22092724	22092834	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001434;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001434;transcript_name=HG00140_ch_T0001434;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001434:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22092724	22092834	.	-	1	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001434;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001434;transcript_name=HG00140_ch_T0001434;gene_name=RBMY1A1;ID=CDS:HG00140_ch_T0001434:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22092835	22093755	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001434;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001434;transcript_name=HG00140_ch_T0001434;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001434:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22093756	22093866	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001434;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001434;transcript_name=HG00140_ch_T0001434;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001434:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22093756	22093866	.	-	1	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001434;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001434;transcript_name=HG00140_ch_T0001434;gene_name=RBMY1A1;ID=CDS:HG00140_ch_T0001434:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22093867	22094300	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001434;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001434;transcript_name=HG00140_ch_T0001434;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001434:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22094301	22094411	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001434;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001434;transcript_name=HG00140_ch_T0001434;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001434:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22094301	22094411	.	-	1	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001434;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001434;transcript_name=HG00140_ch_T0001434;gene_name=RBMY1A1;ID=CDS:HG00140_ch_T0001434:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22094412	22094852	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001434;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001434;transcript_name=HG00140_ch_T0001434;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001434:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22094853	22094963	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001434;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001434;transcript_name=HG00140_ch_T0001434;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001434:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22094853	22094963	.	-	1	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001434;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001434;transcript_name=HG00140_ch_T0001434;gene_name=RBMY1A1;ID=CDS:HG00140_ch_T0001434:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22094964	22095918	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001434;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001434;transcript_name=HG00140_ch_T0001434;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001434:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22095919	22096033	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001434;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001434;transcript_name=HG00140_ch_T0001434;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001434:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22095919	22096033	.	-	2	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001434;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001434;transcript_name=HG00140_ch_T0001434;gene_name=RBMY1A1;ID=CDS:HG00140_ch_T0001434:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22096034	22098043	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001434;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001434;transcript_name=HG00140_ch_T0001434;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001434:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22098044	22098196	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001434;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001434;transcript_name=HG00140_ch_T0001434;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001434:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22098044	22098196	.	-	2	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001434;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001434;transcript_name=HG00140_ch_T0001434;gene_name=RBMY1A1;ID=CDS:HG00140_ch_T0001434:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22098197	22100111	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001434;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001434;transcript_name=HG00140_ch_T0001434;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001434:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22100112	22100289	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001434;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001434;transcript_name=HG00140_ch_T0001434;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001434:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22100112	22100289	.	-	0	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001434;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001434;transcript_name=HG00140_ch_T0001434;gene_name=RBMY1A1;ID=CDS:HG00140_ch_T0001434:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22100290	22103308	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001434;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001434;transcript_name=HG00140_ch_T0001434;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001434:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22103309	22103412	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001434;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001434;transcript_name=HG00140_ch_T0001434;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001434:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22103309	22103412	.	-	2	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001434;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001434;transcript_name=HG00140_ch_T0001434;gene_name=RBMY1A1;ID=CDS:HG00140_ch_T0001434:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22103413	22103886	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001434;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001434;transcript_name=HG00140_ch_T0001434;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001434:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22103887	22103999	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001434;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001434;transcript_name=HG00140_ch_T0001434;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001434:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22103887	22103995	.	-	0	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001434;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001434;transcript_name=HG00140_ch_T0001434;gene_name=RBMY1A1;ID=CDS:HG00140_ch_T0001434:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	22103993	22103995	.	-	0	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001434;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001434;transcript_name=HG00140_ch_T0001434;gene_name=RBMY1A1;ID=start_codon:HG00140_ch_T0001434;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22104000	22105860	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001434;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001434;transcript_name=HG00140_ch_T0001434;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001434:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22105861	22106008	.	-	.	source_transcript=ENST00000382707.6;source_transcript_name=RBMY1A1-202;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382707.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382707.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG00140_ch_T0001434;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001434;transcript_name=HG00140_ch_T0001434;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001434:11;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	22091561	22105983	1000	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00140_ch_T0001435;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_G0000468;transcript_name=HG00140_ch_T0001435;gene_name=RBMY1A1;ID=HG00140_ch_T0001435;Name=RBMY1A1
HG00140_chrY	CAT	exon	22091561	22092137	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00140_ch_T0001435;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001435;transcript_name=HG00140_ch_T0001435;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001435:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22092138	22092548	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00140_ch_T0001435;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001435;transcript_name=HG00140_ch_T0001435;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001435:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22092549	22092637	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00140_ch_T0001435;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001435;transcript_name=HG00140_ch_T0001435;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001435:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22092638	22092723	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00140_ch_T0001435;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001435;transcript_name=HG00140_ch_T0001435;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001435:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22092724	22092834	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00140_ch_T0001435;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001435;transcript_name=HG00140_ch_T0001435;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001435:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22092835	22093755	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00140_ch_T0001435;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001435;transcript_name=HG00140_ch_T0001435;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001435:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22093756	22093866	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00140_ch_T0001435;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001435;transcript_name=HG00140_ch_T0001435;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001435:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22093867	22094300	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00140_ch_T0001435;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001435;transcript_name=HG00140_ch_T0001435;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001435:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22094301	22094411	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00140_ch_T0001435;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001435;transcript_name=HG00140_ch_T0001435;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001435:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22094412	22094852	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00140_ch_T0001435;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001435;transcript_name=HG00140_ch_T0001435;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001435:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22094853	22094963	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00140_ch_T0001435;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001435;transcript_name=HG00140_ch_T0001435;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001435:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22094964	22095918	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00140_ch_T0001435;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001435;transcript_name=HG00140_ch_T0001435;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001435:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22095919	22096033	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00140_ch_T0001435;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001435;transcript_name=HG00140_ch_T0001435;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001435:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22096034	22098043	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00140_ch_T0001435;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001435;transcript_name=HG00140_ch_T0001435;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001435:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22098044	22098196	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00140_ch_T0001435;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001435;transcript_name=HG00140_ch_T0001435;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001435:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22098164	22098196	.	-	0	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00140_ch_T0001435;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001435;transcript_name=HG00140_ch_T0001435;gene_name=RBMY1A1;ID=CDS:HG00140_ch_T0001435:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	22098164	22098166	.	-	0	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00140_ch_T0001435;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001435;transcript_name=HG00140_ch_T0001435;gene_name=RBMY1A1;ID=stop_codon:HG00140_ch_T0001435;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22098197	22103308	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00140_ch_T0001435;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001435;transcript_name=HG00140_ch_T0001435;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001435:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22103309	22103412	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00140_ch_T0001435;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001435;transcript_name=HG00140_ch_T0001435;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001435:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22103309	22103412	.	-	2	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00140_ch_T0001435;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001435;transcript_name=HG00140_ch_T0001435;gene_name=RBMY1A1;ID=CDS:HG00140_ch_T0001435:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22103413	22103886	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00140_ch_T0001435;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001435;transcript_name=HG00140_ch_T0001435;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001435:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22103887	22103999	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00140_ch_T0001435;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001435;transcript_name=HG00140_ch_T0001435;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001435:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22103887	22103995	.	-	0	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00140_ch_T0001435;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001435;transcript_name=HG00140_ch_T0001435;gene_name=RBMY1A1;ID=CDS:HG00140_ch_T0001435:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	22103993	22103995	.	-	0	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00140_ch_T0001435;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001435;transcript_name=HG00140_ch_T0001435;gene_name=RBMY1A1;ID=start_codon:HG00140_ch_T0001435;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22104000	22105860	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00140_ch_T0001435;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001435;transcript_name=HG00140_ch_T0001435;gene_name=RBMY1A1;ID=intron:HG00140_ch_T0001435:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22105861	22105983	.	-	.	source_transcript=ENST00000361046.4;source_transcript_name=RBMY1A1-201;source_gene=ENSG00000234414.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000234414.8;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000361046.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000361046.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=ENST00000358944.8;transcript_id=HG00140_ch_T0001435;gene_id=HG00140_ch_G0000468;Parent=HG00140_ch_T0001435;transcript_name=HG00140_ch_T0001435;gene_name=RBMY1A1;ID=exon:HG00140_ch_T0001435:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	22106876	22109047	.	+	.	source_gene_common_name=ENSG00000227444;source_gene=ENSG00000227444.1;gene_id=HG00140_ch_G0000469;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000227444;gene_sources=liftoff,transMap;ID=HG00140_ch_G0000469;Name=ENSG00000227444
HG00140_chrY	CAT	transcript	22106876	22109047	1000	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG00140_ch_T0001436;gene_id=HG00140_ch_G0000469;Parent=HG00140_ch_G0000469;transcript_name=HG00140_ch_T0001436;gene_name=ENSG00000227444;ID=HG00140_ch_T0001436;Name=ENSG00000227444
HG00140_chrY	CAT	exon	22106876	22107269	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG00140_ch_T0001436;gene_id=HG00140_ch_G0000469;Parent=HG00140_ch_T0001436;transcript_name=HG00140_ch_T0001436;gene_name=ENSG00000227444;ID=exon:HG00140_ch_T0001436:0;Name=ENSG00000227444;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22107270	22108257	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG00140_ch_T0001436;gene_id=HG00140_ch_G0000469;Parent=HG00140_ch_T0001436;transcript_name=HG00140_ch_T0001436;gene_name=ENSG00000227444;ID=intron:HG00140_ch_T0001436:0;Name=ENSG00000227444;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22108258	22108342	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG00140_ch_T0001436;gene_id=HG00140_ch_G0000469;Parent=HG00140_ch_T0001436;transcript_name=HG00140_ch_T0001436;gene_name=ENSG00000227444;ID=exon:HG00140_ch_T0001436:1;Name=ENSG00000227444;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22108343	22108586	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG00140_ch_T0001436;gene_id=HG00140_ch_G0000469;Parent=HG00140_ch_T0001436;transcript_name=HG00140_ch_T0001436;gene_name=ENSG00000227444;ID=intron:HG00140_ch_T0001436:1;Name=ENSG00000227444;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22108587	22108882	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG00140_ch_T0001436;gene_id=HG00140_ch_G0000469;Parent=HG00140_ch_T0001436;transcript_name=HG00140_ch_T0001436;gene_name=ENSG00000227444;ID=exon:HG00140_ch_T0001436:2;Name=ENSG00000227444;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22108883	22108999	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG00140_ch_T0001436;gene_id=HG00140_ch_G0000469;Parent=HG00140_ch_T0001436;transcript_name=HG00140_ch_T0001436;gene_name=ENSG00000227444;ID=intron:HG00140_ch_T0001436:2;Name=ENSG00000227444;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22109000	22109047	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=transMap;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG00140_ch_T0001436;gene_id=HG00140_ch_G0000469;Parent=HG00140_ch_T0001436;transcript_name=HG00140_ch_T0001436;gene_name=ENSG00000227444;ID=exon:HG00140_ch_T0001436:3;Name=ENSG00000227444;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	22106876	22109047	1000	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG00140_ch_T0001437;gene_id=HG00140_ch_G0000469;Parent=HG00140_ch_G0000469;transcript_name=HG00140_ch_T0001437;gene_name=ENSG00000227444;ID=HG00140_ch_T0001437;Name=ENSG00000227444
HG00140_chrY	CAT	exon	22106876	22107269	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG00140_ch_T0001437;gene_id=HG00140_ch_G0000469;Parent=HG00140_ch_T0001437;transcript_name=HG00140_ch_T0001437;gene_name=ENSG00000227444;ID=exon:HG00140_ch_T0001437:0;Name=ENSG00000227444;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22107270	22108257	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG00140_ch_T0001437;gene_id=HG00140_ch_G0000469;Parent=HG00140_ch_T0001437;transcript_name=HG00140_ch_T0001437;gene_name=ENSG00000227444;ID=intron:HG00140_ch_T0001437:0;Name=ENSG00000227444;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22108258	22108342	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG00140_ch_T0001437;gene_id=HG00140_ch_G0000469;Parent=HG00140_ch_T0001437;transcript_name=HG00140_ch_T0001437;gene_name=ENSG00000227444;ID=exon:HG00140_ch_T0001437:1;Name=ENSG00000227444;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22108343	22108586	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG00140_ch_T0001437;gene_id=HG00140_ch_G0000469;Parent=HG00140_ch_T0001437;transcript_name=HG00140_ch_T0001437;gene_name=ENSG00000227444;ID=intron:HG00140_ch_T0001437:1;Name=ENSG00000227444;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22108587	22108665	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG00140_ch_T0001437;gene_id=HG00140_ch_G0000469;Parent=HG00140_ch_T0001437;transcript_name=HG00140_ch_T0001437;gene_name=ENSG00000227444;ID=exon:HG00140_ch_T0001437:2;Name=ENSG00000227444;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22108666	22108738	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG00140_ch_T0001437;gene_id=HG00140_ch_G0000469;Parent=HG00140_ch_T0001437;transcript_name=HG00140_ch_T0001437;gene_name=ENSG00000227444;ID=intron:HG00140_ch_T0001437:2;Name=ENSG00000227444;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22108739	22108882	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG00140_ch_T0001437;gene_id=HG00140_ch_G0000469;Parent=HG00140_ch_T0001437;transcript_name=HG00140_ch_T0001437;gene_name=ENSG00000227444;ID=exon:HG00140_ch_T0001437:3;Name=ENSG00000227444;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22108883	22108999	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG00140_ch_T0001437;gene_id=HG00140_ch_G0000469;Parent=HG00140_ch_T0001437;transcript_name=HG00140_ch_T0001437;gene_name=ENSG00000227444;ID=intron:HG00140_ch_T0001437:3;Name=ENSG00000227444;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22109000	22109047	.	+	.	source_transcript=ENST00000426983.1;source_transcript_name=ENST00000426983;source_gene=ENSG00000227444.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227444.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426983.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000227444;transcript_id=HG00140_ch_T0001437;gene_id=HG00140_ch_G0000469;Parent=HG00140_ch_T0001437;transcript_name=HG00140_ch_T0001437;gene_name=ENSG00000227444;ID=exon:HG00140_ch_T0001437:4;Name=ENSG00000227444;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	22115460	22125094	.	-	.	source_gene_common_name=RBMY2AP;source_gene=ENSG00000226092.4;gene_id=HG00140_ch_G0000470;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY2AP;gene_sources=liftoff;ID=HG00140_ch_G0000470;Name=RBMY2AP
HG00140_chrY	CAT	transcript	22115460	22125094	1000	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=HG00140_ch_T0001438;gene_id=HG00140_ch_G0000470;Parent=HG00140_ch_G0000470;transcript_name=HG00140_ch_T0001438;gene_name=RBMY2AP;ID=HG00140_ch_T0001438;Name=RBMY2AP
HG00140_chrY	CAT	exon	22115460	22115758	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=HG00140_ch_T0001438;gene_id=HG00140_ch_G0000470;Parent=HG00140_ch_T0001438;transcript_name=HG00140_ch_T0001438;gene_name=RBMY2AP;ID=exon:HG00140_ch_T0001438:0;Name=RBMY2AP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22115759	22116182	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=HG00140_ch_T0001438;gene_id=HG00140_ch_G0000470;Parent=HG00140_ch_T0001438;transcript_name=HG00140_ch_T0001438;gene_name=RBMY2AP;ID=intron:HG00140_ch_T0001438:0;Name=RBMY2AP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22116183	22116270	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=HG00140_ch_T0001438;gene_id=HG00140_ch_G0000470;Parent=HG00140_ch_T0001438;transcript_name=HG00140_ch_T0001438;gene_name=RBMY2AP;ID=exon:HG00140_ch_T0001438:1;Name=RBMY2AP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22116271	22116352	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=HG00140_ch_T0001438;gene_id=HG00140_ch_G0000470;Parent=HG00140_ch_T0001438;transcript_name=HG00140_ch_T0001438;gene_name=RBMY2AP;ID=intron:HG00140_ch_T0001438:1;Name=RBMY2AP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22116353	22116463	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=HG00140_ch_T0001438;gene_id=HG00140_ch_G0000470;Parent=HG00140_ch_T0001438;transcript_name=HG00140_ch_T0001438;gene_name=RBMY2AP;ID=exon:HG00140_ch_T0001438:2;Name=RBMY2AP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22116464	22117332	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=HG00140_ch_T0001438;gene_id=HG00140_ch_G0000470;Parent=HG00140_ch_T0001438;transcript_name=HG00140_ch_T0001438;gene_name=RBMY2AP;ID=intron:HG00140_ch_T0001438:2;Name=RBMY2AP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22117333	22117447	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=HG00140_ch_T0001438;gene_id=HG00140_ch_G0000470;Parent=HG00140_ch_T0001438;transcript_name=HG00140_ch_T0001438;gene_name=RBMY2AP;ID=exon:HG00140_ch_T0001438:3;Name=RBMY2AP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22117448	22119454	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=HG00140_ch_T0001438;gene_id=HG00140_ch_G0000470;Parent=HG00140_ch_T0001438;transcript_name=HG00140_ch_T0001438;gene_name=RBMY2AP;ID=intron:HG00140_ch_T0001438:3;Name=RBMY2AP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22119455	22119607	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=HG00140_ch_T0001438;gene_id=HG00140_ch_G0000470;Parent=HG00140_ch_T0001438;transcript_name=HG00140_ch_T0001438;gene_name=RBMY2AP;ID=exon:HG00140_ch_T0001438:4;Name=RBMY2AP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22119608	22121542	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=HG00140_ch_T0001438;gene_id=HG00140_ch_G0000470;Parent=HG00140_ch_T0001438;transcript_name=HG00140_ch_T0001438;gene_name=RBMY2AP;ID=intron:HG00140_ch_T0001438:4;Name=RBMY2AP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22121543	22121720	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=HG00140_ch_T0001438;gene_id=HG00140_ch_G0000470;Parent=HG00140_ch_T0001438;transcript_name=HG00140_ch_T0001438;gene_name=RBMY2AP;ID=exon:HG00140_ch_T0001438:5;Name=RBMY2AP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22121721	22124428	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=HG00140_ch_T0001438;gene_id=HG00140_ch_G0000470;Parent=HG00140_ch_T0001438;transcript_name=HG00140_ch_T0001438;gene_name=RBMY2AP;ID=intron:HG00140_ch_T0001438:5;Name=RBMY2AP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22124429	22124532	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=HG00140_ch_T0001438;gene_id=HG00140_ch_G0000470;Parent=HG00140_ch_T0001438;transcript_name=HG00140_ch_T0001438;gene_name=RBMY2AP;ID=exon:HG00140_ch_T0001438:6;Name=RBMY2AP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22124533	22124985	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=HG00140_ch_T0001438;gene_id=HG00140_ch_G0000470;Parent=HG00140_ch_T0001438;transcript_name=HG00140_ch_T0001438;gene_name=RBMY2AP;ID=intron:HG00140_ch_T0001438:6;Name=RBMY2AP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22124986	22125094	.	-	.	source_transcript=ENST00000445405.1;source_transcript_name=RBMY2AP-201;source_gene=ENSG00000226092.4;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226092.4;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445405.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2AP;transcript_id=HG00140_ch_T0001438;gene_id=HG00140_ch_G0000470;Parent=HG00140_ch_T0001438;transcript_name=HG00140_ch_T0001438;gene_name=RBMY2AP;ID=exon:HG00140_ch_T0001438:7;Name=RBMY2AP;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	22117250	22127096	.	-	.	source_gene_common_name=ENSG00000295847;source_gene=ENSG00000295847.1;gene_id=HG00140_ch_G0000471;gene_biotype=lncRNA;gene_name=ENSG00000295847;gene_sources=liftoff;ID=HG00140_ch_G0000471;Name=ENSG00000295847
HG00140_chrY	CAT	transcript	22117250	22127096	1000	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00140_ch_T0001439;gene_id=HG00140_ch_G0000471;Parent=HG00140_ch_G0000471;transcript_name=HG00140_ch_T0001439;gene_name=ENSG00000295847;ID=HG00140_ch_T0001439;Name=ENSG00000295847
HG00140_chrY	CAT	exon	22117250	22117447	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00140_ch_T0001439;gene_id=HG00140_ch_G0000471;Parent=HG00140_ch_T0001439;transcript_name=HG00140_ch_T0001439;gene_name=ENSG00000295847;ID=exon:HG00140_ch_T0001439:0;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22117448	22119454	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00140_ch_T0001439;gene_id=HG00140_ch_G0000471;Parent=HG00140_ch_T0001439;transcript_name=HG00140_ch_T0001439;gene_name=ENSG00000295847;ID=intron:HG00140_ch_T0001439:0;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22119455	22119607	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00140_ch_T0001439;gene_id=HG00140_ch_G0000471;Parent=HG00140_ch_T0001439;transcript_name=HG00140_ch_T0001439;gene_name=ENSG00000295847;ID=exon:HG00140_ch_T0001439:1;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22119608	22121542	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00140_ch_T0001439;gene_id=HG00140_ch_G0000471;Parent=HG00140_ch_T0001439;transcript_name=HG00140_ch_T0001439;gene_name=ENSG00000295847;ID=intron:HG00140_ch_T0001439:1;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22121543	22121720	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00140_ch_T0001439;gene_id=HG00140_ch_G0000471;Parent=HG00140_ch_T0001439;transcript_name=HG00140_ch_T0001439;gene_name=ENSG00000295847;ID=exon:HG00140_ch_T0001439:2;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22121721	22124428	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00140_ch_T0001439;gene_id=HG00140_ch_G0000471;Parent=HG00140_ch_T0001439;transcript_name=HG00140_ch_T0001439;gene_name=ENSG00000295847;ID=intron:HG00140_ch_T0001439:2;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22124429	22124532	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00140_ch_T0001439;gene_id=HG00140_ch_G0000471;Parent=HG00140_ch_T0001439;transcript_name=HG00140_ch_T0001439;gene_name=ENSG00000295847;ID=exon:HG00140_ch_T0001439:3;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22124533	22124985	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00140_ch_T0001439;gene_id=HG00140_ch_G0000471;Parent=HG00140_ch_T0001439;transcript_name=HG00140_ch_T0001439;gene_name=ENSG00000295847;ID=intron:HG00140_ch_T0001439:3;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22124986	22125098	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00140_ch_T0001439;gene_id=HG00140_ch_G0000471;Parent=HG00140_ch_T0001439;transcript_name=HG00140_ch_T0001439;gene_name=ENSG00000295847;ID=exon:HG00140_ch_T0001439:4;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22125099	22126112	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00140_ch_T0001439;gene_id=HG00140_ch_G0000471;Parent=HG00140_ch_T0001439;transcript_name=HG00140_ch_T0001439;gene_name=ENSG00000295847;ID=intron:HG00140_ch_T0001439:4;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22126113	22126192	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00140_ch_T0001439;gene_id=HG00140_ch_G0000471;Parent=HG00140_ch_T0001439;transcript_name=HG00140_ch_T0001439;gene_name=ENSG00000295847;ID=exon:HG00140_ch_T0001439:5;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22126193	22126946	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00140_ch_T0001439;gene_id=HG00140_ch_G0000471;Parent=HG00140_ch_T0001439;transcript_name=HG00140_ch_T0001439;gene_name=ENSG00000295847;ID=intron:HG00140_ch_T0001439:5;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22126947	22127096	.	-	.	source_transcript=ENST00000733072.1;source_transcript_name=ENST00000733072;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733072.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733072.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00140_ch_T0001439;gene_id=HG00140_ch_G0000471;Parent=HG00140_ch_T0001439;transcript_name=HG00140_ch_T0001439;gene_name=ENSG00000295847;ID=exon:HG00140_ch_T0001439:6;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	22118619	22127065	1000	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00140_ch_T0001440;gene_id=HG00140_ch_G0000471;Parent=HG00140_ch_G0000471;transcript_name=HG00140_ch_T0001440;gene_name=ENSG00000295847;ID=HG00140_ch_T0001440;Name=ENSG00000295847
HG00140_chrY	CAT	exon	22118619	22118876	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00140_ch_T0001440;gene_id=HG00140_ch_G0000471;Parent=HG00140_ch_T0001440;transcript_name=HG00140_ch_T0001440;gene_name=ENSG00000295847;ID=exon:HG00140_ch_T0001440:0;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22118877	22119454	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00140_ch_T0001440;gene_id=HG00140_ch_G0000471;Parent=HG00140_ch_T0001440;transcript_name=HG00140_ch_T0001440;gene_name=ENSG00000295847;ID=intron:HG00140_ch_T0001440:0;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22119455	22119607	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00140_ch_T0001440;gene_id=HG00140_ch_G0000471;Parent=HG00140_ch_T0001440;transcript_name=HG00140_ch_T0001440;gene_name=ENSG00000295847;ID=exon:HG00140_ch_T0001440:1;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22119608	22121542	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00140_ch_T0001440;gene_id=HG00140_ch_G0000471;Parent=HG00140_ch_T0001440;transcript_name=HG00140_ch_T0001440;gene_name=ENSG00000295847;ID=intron:HG00140_ch_T0001440:1;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22121543	22121720	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00140_ch_T0001440;gene_id=HG00140_ch_G0000471;Parent=HG00140_ch_T0001440;transcript_name=HG00140_ch_T0001440;gene_name=ENSG00000295847;ID=exon:HG00140_ch_T0001440:2;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22121721	22124428	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00140_ch_T0001440;gene_id=HG00140_ch_G0000471;Parent=HG00140_ch_T0001440;transcript_name=HG00140_ch_T0001440;gene_name=ENSG00000295847;ID=intron:HG00140_ch_T0001440:2;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22124429	22124532	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00140_ch_T0001440;gene_id=HG00140_ch_G0000471;Parent=HG00140_ch_T0001440;transcript_name=HG00140_ch_T0001440;gene_name=ENSG00000295847;ID=exon:HG00140_ch_T0001440:3;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22124533	22124985	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00140_ch_T0001440;gene_id=HG00140_ch_G0000471;Parent=HG00140_ch_T0001440;transcript_name=HG00140_ch_T0001440;gene_name=ENSG00000295847;ID=intron:HG00140_ch_T0001440:3;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22124986	22125098	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00140_ch_T0001440;gene_id=HG00140_ch_G0000471;Parent=HG00140_ch_T0001440;transcript_name=HG00140_ch_T0001440;gene_name=ENSG00000295847;ID=exon:HG00140_ch_T0001440:4;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22125099	22126112	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00140_ch_T0001440;gene_id=HG00140_ch_G0000471;Parent=HG00140_ch_T0001440;transcript_name=HG00140_ch_T0001440;gene_name=ENSG00000295847;ID=intron:HG00140_ch_T0001440:4;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22126113	22126192	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00140_ch_T0001440;gene_id=HG00140_ch_G0000471;Parent=HG00140_ch_T0001440;transcript_name=HG00140_ch_T0001440;gene_name=ENSG00000295847;ID=exon:HG00140_ch_T0001440:5;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22126193	22126946	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00140_ch_T0001440;gene_id=HG00140_ch_G0000471;Parent=HG00140_ch_T0001440;transcript_name=HG00140_ch_T0001440;gene_name=ENSG00000295847;ID=intron:HG00140_ch_T0001440:5;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22126947	22127065	.	-	.	source_transcript=ENST00000733073.1;source_transcript_name=ENST00000733073;source_gene=ENSG00000295847.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295847.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000733073.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000733073.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295847;transcript_id=HG00140_ch_T0001440;gene_id=HG00140_ch_G0000471;Parent=HG00140_ch_T0001440;transcript_name=HG00140_ch_T0001440;gene_name=ENSG00000295847;ID=exon:HG00140_ch_T0001440:6;Name=ENSG00000295847;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	22127956	22129537	.	+	.	source_gene_common_name=ENSG00000237968;source_gene=ENSG00000237968.1;alternative_source_transcripts=ENST00000426526.1;gene_id=HG00140_ch_G0000472;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000237968;gene_sources=liftoff;ID=HG00140_ch_G0000472;Name=ENSG00000237968
HG00140_chrY	CAT	transcript	22127956	22129537	1000	+	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;alternative_source_transcripts=ENST00000426526.1;transcript_id=HG00140_ch_T0001441;gene_id=HG00140_ch_G0000472;Parent=HG00140_ch_G0000472;transcript_name=HG00140_ch_T0001441;gene_name=ENSG00000237968;ID=HG00140_ch_T0001441;Name=ENSG00000237968
HG00140_chrY	CAT	exon	22127956	22128287	.	+	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;alternative_source_transcripts=ENST00000426526.1;transcript_id=HG00140_ch_T0001441;gene_id=HG00140_ch_G0000472;Parent=HG00140_ch_T0001441;transcript_name=HG00140_ch_T0001441;gene_name=ENSG00000237968;ID=exon:HG00140_ch_T0001441:0;Name=ENSG00000237968;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22128288	22128766	.	+	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;alternative_source_transcripts=ENST00000426526.1;transcript_id=HG00140_ch_T0001441;gene_id=HG00140_ch_G0000472;Parent=HG00140_ch_T0001441;transcript_name=HG00140_ch_T0001441;gene_name=ENSG00000237968;ID=intron:HG00140_ch_T0001441:0;Name=ENSG00000237968;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22128767	22128805	.	+	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;alternative_source_transcripts=ENST00000426526.1;transcript_id=HG00140_ch_T0001441;gene_id=HG00140_ch_G0000472;Parent=HG00140_ch_T0001441;transcript_name=HG00140_ch_T0001441;gene_name=ENSG00000237968;ID=exon:HG00140_ch_T0001441:1;Name=ENSG00000237968;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22128806	22129003	.	+	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;alternative_source_transcripts=ENST00000426526.1;transcript_id=HG00140_ch_T0001441;gene_id=HG00140_ch_G0000472;Parent=HG00140_ch_T0001441;transcript_name=HG00140_ch_T0001441;gene_name=ENSG00000237968;ID=intron:HG00140_ch_T0001441:1;Name=ENSG00000237968;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22129004	22129113	.	+	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;alternative_source_transcripts=ENST00000426526.1;transcript_id=HG00140_ch_T0001441;gene_id=HG00140_ch_G0000472;Parent=HG00140_ch_T0001441;transcript_name=HG00140_ch_T0001441;gene_name=ENSG00000237968;ID=exon:HG00140_ch_T0001441:2;Name=ENSG00000237968;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22129114	22129200	.	+	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;alternative_source_transcripts=ENST00000426526.1;transcript_id=HG00140_ch_T0001441;gene_id=HG00140_ch_G0000472;Parent=HG00140_ch_T0001441;transcript_name=HG00140_ch_T0001441;gene_name=ENSG00000237968;ID=intron:HG00140_ch_T0001441:2;Name=ENSG00000237968;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22129201	22129344	.	+	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;alternative_source_transcripts=ENST00000426526.1;transcript_id=HG00140_ch_T0001441;gene_id=HG00140_ch_G0000472;Parent=HG00140_ch_T0001441;transcript_name=HG00140_ch_T0001441;gene_name=ENSG00000237968;ID=exon:HG00140_ch_T0001441:3;Name=ENSG00000237968;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22129345	22129461	.	+	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;alternative_source_transcripts=ENST00000426526.1;transcript_id=HG00140_ch_T0001441;gene_id=HG00140_ch_G0000472;Parent=HG00140_ch_T0001441;transcript_name=HG00140_ch_T0001441;gene_name=ENSG00000237968;ID=intron:HG00140_ch_T0001441:3;Name=ENSG00000237968;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22129462	22129537	.	+	.	source_transcript=ENST00000426526.1;source_transcript_name=ENST00000426526;source_gene=ENSG00000237968.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237968.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426526.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426526.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000237968;alternative_source_transcripts=ENST00000426526.1;transcript_id=HG00140_ch_T0001441;gene_id=HG00140_ch_G0000472;Parent=HG00140_ch_T0001441;transcript_name=HG00140_ch_T0001441;gene_name=ENSG00000237968;ID=exon:HG00140_ch_T0001441:4;Name=ENSG00000237968;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	22133311	22138758	.	-	.	source_gene_common_name=ENSG00000305658;source_gene=ENSG00000305658.1;gene_id=HG00140_ch_G0000473;gene_biotype=lncRNA;gene_name=ENSG00000305658;gene_sources=liftoff;ID=HG00140_ch_G0000473;Name=ENSG00000305658
HG00140_chrY	CAT	transcript	22133311	22138758	1000	-	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;transcript_id=HG00140_ch_T0001442;gene_id=HG00140_ch_G0000473;Parent=HG00140_ch_G0000473;transcript_name=HG00140_ch_T0001442;gene_name=ENSG00000305658;ID=HG00140_ch_T0001442;Name=ENSG00000305658
HG00140_chrY	CAT	exon	22133311	22134016	.	-	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;transcript_id=HG00140_ch_T0001442;gene_id=HG00140_ch_G0000473;Parent=HG00140_ch_T0001442;transcript_name=HG00140_ch_T0001442;gene_name=ENSG00000305658;ID=exon:HG00140_ch_T0001442:0;Name=ENSG00000305658;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22134017	22134380	.	-	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;transcript_id=HG00140_ch_T0001442;gene_id=HG00140_ch_G0000473;Parent=HG00140_ch_T0001442;transcript_name=HG00140_ch_T0001442;gene_name=ENSG00000305658;ID=intron:HG00140_ch_T0001442:0;Name=ENSG00000305658;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22134381	22134507	.	-	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;transcript_id=HG00140_ch_T0001442;gene_id=HG00140_ch_G0000473;Parent=HG00140_ch_T0001442;transcript_name=HG00140_ch_T0001442;gene_name=ENSG00000305658;ID=exon:HG00140_ch_T0001442:1;Name=ENSG00000305658;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22134508	22136376	.	-	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;transcript_id=HG00140_ch_T0001442;gene_id=HG00140_ch_G0000473;Parent=HG00140_ch_T0001442;transcript_name=HG00140_ch_T0001442;gene_name=ENSG00000305658;ID=intron:HG00140_ch_T0001442:1;Name=ENSG00000305658;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22136377	22136510	.	-	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;transcript_id=HG00140_ch_T0001442;gene_id=HG00140_ch_G0000473;Parent=HG00140_ch_T0001442;transcript_name=HG00140_ch_T0001442;gene_name=ENSG00000305658;ID=exon:HG00140_ch_T0001442:2;Name=ENSG00000305658;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22136511	22138419	.	-	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;transcript_id=HG00140_ch_T0001442;gene_id=HG00140_ch_G0000473;Parent=HG00140_ch_T0001442;transcript_name=HG00140_ch_T0001442;gene_name=ENSG00000305658;ID=intron:HG00140_ch_T0001442:2;Name=ENSG00000305658;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22138420	22138758	.	-	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;transcript_id=HG00140_ch_T0001442;gene_id=HG00140_ch_G0000473;Parent=HG00140_ch_T0001442;transcript_name=HG00140_ch_T0001442;gene_name=ENSG00000305658;ID=exon:HG00140_ch_T0001442:3;Name=ENSG00000305658;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	22160258	22193292	.	+	.	source_gene_common_name=OFD1P8Y;source_gene=ENSG00000231159.1;alternative_source_transcripts=ENST00000449148.1;gene_id=HG00140_ch_G0000474;gene_biotype=unprocessed_pseudogene;gene_name=OFD1P8Y;gene_sources=liftoff;ID=HG00140_ch_G0000474;Name=OFD1P8Y
HG00140_chrY	CAT	transcript	22160258	22193292	1000	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG00140_ch_T0001443;gene_id=HG00140_ch_G0000474;Parent=HG00140_ch_G0000474;transcript_name=HG00140_ch_T0001443;gene_name=OFD1P8Y;ID=HG00140_ch_T0001443;Name=OFD1P8Y
HG00140_chrY	CAT	exon	22160258	22160364	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG00140_ch_T0001443;gene_id=HG00140_ch_G0000474;Parent=HG00140_ch_T0001443;transcript_name=HG00140_ch_T0001443;gene_name=OFD1P8Y;ID=exon:HG00140_ch_T0001443:0;Name=OFD1P8Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22160365	22161876	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG00140_ch_T0001443;gene_id=HG00140_ch_G0000474;Parent=HG00140_ch_T0001443;transcript_name=HG00140_ch_T0001443;gene_name=OFD1P8Y;ID=intron:HG00140_ch_T0001443:0;Name=OFD1P8Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22161877	22162004	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG00140_ch_T0001443;gene_id=HG00140_ch_G0000474;Parent=HG00140_ch_T0001443;transcript_name=HG00140_ch_T0001443;gene_name=OFD1P8Y;ID=exon:HG00140_ch_T0001443:1;Name=OFD1P8Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22162005	22162538	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG00140_ch_T0001443;gene_id=HG00140_ch_G0000474;Parent=HG00140_ch_T0001443;transcript_name=HG00140_ch_T0001443;gene_name=OFD1P8Y;ID=intron:HG00140_ch_T0001443:1;Name=OFD1P8Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22162539	22162648	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG00140_ch_T0001443;gene_id=HG00140_ch_G0000474;Parent=HG00140_ch_T0001443;transcript_name=HG00140_ch_T0001443;gene_name=OFD1P8Y;ID=exon:HG00140_ch_T0001443:2;Name=OFD1P8Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22162649	22164365	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG00140_ch_T0001443;gene_id=HG00140_ch_G0000474;Parent=HG00140_ch_T0001443;transcript_name=HG00140_ch_T0001443;gene_name=OFD1P8Y;ID=intron:HG00140_ch_T0001443:2;Name=OFD1P8Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22164366	22164981	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG00140_ch_T0001443;gene_id=HG00140_ch_G0000474;Parent=HG00140_ch_T0001443;transcript_name=HG00140_ch_T0001443;gene_name=OFD1P8Y;ID=exon:HG00140_ch_T0001443:3;Name=OFD1P8Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22164982	22165354	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG00140_ch_T0001443;gene_id=HG00140_ch_G0000474;Parent=HG00140_ch_T0001443;transcript_name=HG00140_ch_T0001443;gene_name=OFD1P8Y;ID=intron:HG00140_ch_T0001443:3;Name=OFD1P8Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22165355	22165465	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG00140_ch_T0001443;gene_id=HG00140_ch_G0000474;Parent=HG00140_ch_T0001443;transcript_name=HG00140_ch_T0001443;gene_name=OFD1P8Y;ID=exon:HG00140_ch_T0001443:4;Name=OFD1P8Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22165466	22184805	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG00140_ch_T0001443;gene_id=HG00140_ch_G0000474;Parent=HG00140_ch_T0001443;transcript_name=HG00140_ch_T0001443;gene_name=OFD1P8Y;ID=intron:HG00140_ch_T0001443:4;Name=OFD1P8Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22184806	22184906	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG00140_ch_T0001443;gene_id=HG00140_ch_G0000474;Parent=HG00140_ch_T0001443;transcript_name=HG00140_ch_T0001443;gene_name=OFD1P8Y;ID=exon:HG00140_ch_T0001443:5;Name=OFD1P8Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22184907	22191538	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG00140_ch_T0001443;gene_id=HG00140_ch_G0000474;Parent=HG00140_ch_T0001443;transcript_name=HG00140_ch_T0001443;gene_name=OFD1P8Y;ID=intron:HG00140_ch_T0001443:5;Name=OFD1P8Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22191539	22191690	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG00140_ch_T0001443;gene_id=HG00140_ch_G0000474;Parent=HG00140_ch_T0001443;transcript_name=HG00140_ch_T0001443;gene_name=OFD1P8Y;ID=exon:HG00140_ch_T0001443:6;Name=OFD1P8Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22191691	22192886	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG00140_ch_T0001443;gene_id=HG00140_ch_G0000474;Parent=HG00140_ch_T0001443;transcript_name=HG00140_ch_T0001443;gene_name=OFD1P8Y;ID=intron:HG00140_ch_T0001443:6;Name=OFD1P8Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22192887	22192952	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG00140_ch_T0001443;gene_id=HG00140_ch_G0000474;Parent=HG00140_ch_T0001443;transcript_name=HG00140_ch_T0001443;gene_name=OFD1P8Y;ID=exon:HG00140_ch_T0001443:7;Name=OFD1P8Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22192953	22193250	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG00140_ch_T0001443;gene_id=HG00140_ch_G0000474;Parent=HG00140_ch_T0001443;transcript_name=HG00140_ch_T0001443;gene_name=OFD1P8Y;ID=intron:HG00140_ch_T0001443:7;Name=OFD1P8Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22193251	22193292	.	+	.	source_transcript=ENST00000449148.1;source_transcript_name=OFD1P8Y-201;source_gene=ENSG00000231159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449148.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449148.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P8Y;alternative_source_transcripts=ENST00000449148.1;transcript_id=HG00140_ch_T0001443;gene_id=HG00140_ch_G0000474;Parent=HG00140_ch_T0001443;transcript_name=HG00140_ch_T0001443;gene_name=OFD1P8Y;ID=exon:HG00140_ch_T0001443:8;Name=OFD1P8Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	22189079	22237429	.	-	.	source_gene_common_name=ENSG00000310035;source_gene=ENSG00000310035.1;gene_id=HG00140_ch_G0000475;gene_biotype=lncRNA;gene_name=ENSG00000310035;gene_sources=liftoff;ID=HG00140_ch_G0000475;Name=ENSG00000310035
HG00140_chrY	CAT	transcript	22189079	22237368	1000	-	.	source_transcript=ENST00000846705.1;source_transcript_name=ENST00000846705;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846705.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG00140_ch_T0001444;gene_id=HG00140_ch_G0000475;Parent=HG00140_ch_G0000475;transcript_name=HG00140_ch_T0001444;gene_name=ENSG00000310035;ID=HG00140_ch_T0001444;Name=ENSG00000310035
HG00140_chrY	CAT	exon	22189079	22189353	.	-	.	source_transcript=ENST00000846705.1;source_transcript_name=ENST00000846705;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG00140_ch_T0001444;gene_id=HG00140_ch_G0000475;Parent=HG00140_ch_T0001444;transcript_name=HG00140_ch_T0001444;gene_name=ENSG00000310035;ID=exon:HG00140_ch_T0001444:0;Name=ENSG00000310035;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22189354	22196899	.	-	.	source_transcript=ENST00000846705.1;source_transcript_name=ENST00000846705;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG00140_ch_T0001444;gene_id=HG00140_ch_G0000475;Parent=HG00140_ch_T0001444;transcript_name=HG00140_ch_T0001444;gene_name=ENSG00000310035;ID=intron:HG00140_ch_T0001444:0;Name=ENSG00000310035;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22196900	22197202	.	-	.	source_transcript=ENST00000846705.1;source_transcript_name=ENST00000846705;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG00140_ch_T0001444;gene_id=HG00140_ch_G0000475;Parent=HG00140_ch_T0001444;transcript_name=HG00140_ch_T0001444;gene_name=ENSG00000310035;ID=exon:HG00140_ch_T0001444:1;Name=ENSG00000310035;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22197203	22232378	.	-	.	source_transcript=ENST00000846705.1;source_transcript_name=ENST00000846705;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG00140_ch_T0001444;gene_id=HG00140_ch_G0000475;Parent=HG00140_ch_T0001444;transcript_name=HG00140_ch_T0001444;gene_name=ENSG00000310035;ID=intron:HG00140_ch_T0001444:1;Name=ENSG00000310035;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22232379	22232540	.	-	.	source_transcript=ENST00000846705.1;source_transcript_name=ENST00000846705;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG00140_ch_T0001444;gene_id=HG00140_ch_G0000475;Parent=HG00140_ch_T0001444;transcript_name=HG00140_ch_T0001444;gene_name=ENSG00000310035;ID=exon:HG00140_ch_T0001444:2;Name=ENSG00000310035;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22232541	22237104	.	-	.	source_transcript=ENST00000846705.1;source_transcript_name=ENST00000846705;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG00140_ch_T0001444;gene_id=HG00140_ch_G0000475;Parent=HG00140_ch_T0001444;transcript_name=HG00140_ch_T0001444;gene_name=ENSG00000310035;ID=intron:HG00140_ch_T0001444:2;Name=ENSG00000310035;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22237105	22237368	.	-	.	source_transcript=ENST00000846705.1;source_transcript_name=ENST00000846705;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846705.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846705.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG00140_ch_T0001444;gene_id=HG00140_ch_G0000475;Parent=HG00140_ch_T0001444;transcript_name=HG00140_ch_T0001444;gene_name=ENSG00000310035;ID=exon:HG00140_ch_T0001444:3;Name=ENSG00000310035;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	22196574	22237429	1000	-	.	source_transcript=ENST00000846706.1;source_transcript_name=ENST00000846706;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846706.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG00140_ch_T0001445;gene_id=HG00140_ch_G0000475;Parent=HG00140_ch_G0000475;transcript_name=HG00140_ch_T0001445;gene_name=ENSG00000310035;ID=HG00140_ch_T0001445;Name=ENSG00000310035
HG00140_chrY	CAT	exon	22196574	22197202	.	-	.	source_transcript=ENST00000846706.1;source_transcript_name=ENST00000846706;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG00140_ch_T0001445;gene_id=HG00140_ch_G0000475;Parent=HG00140_ch_T0001445;transcript_name=HG00140_ch_T0001445;gene_name=ENSG00000310035;ID=exon:HG00140_ch_T0001445:0;Name=ENSG00000310035;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22197203	22232378	.	-	.	source_transcript=ENST00000846706.1;source_transcript_name=ENST00000846706;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG00140_ch_T0001445;gene_id=HG00140_ch_G0000475;Parent=HG00140_ch_T0001445;transcript_name=HG00140_ch_T0001445;gene_name=ENSG00000310035;ID=intron:HG00140_ch_T0001445:0;Name=ENSG00000310035;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22232379	22232540	.	-	.	source_transcript=ENST00000846706.1;source_transcript_name=ENST00000846706;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG00140_ch_T0001445;gene_id=HG00140_ch_G0000475;Parent=HG00140_ch_T0001445;transcript_name=HG00140_ch_T0001445;gene_name=ENSG00000310035;ID=exon:HG00140_ch_T0001445:1;Name=ENSG00000310035;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22232541	22237104	.	-	.	source_transcript=ENST00000846706.1;source_transcript_name=ENST00000846706;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG00140_ch_T0001445;gene_id=HG00140_ch_G0000475;Parent=HG00140_ch_T0001445;transcript_name=HG00140_ch_T0001445;gene_name=ENSG00000310035;ID=intron:HG00140_ch_T0001445:1;Name=ENSG00000310035;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22237105	22237429	.	-	.	source_transcript=ENST00000846706.1;source_transcript_name=ENST00000846706;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG00140_ch_T0001445;gene_id=HG00140_ch_G0000475;Parent=HG00140_ch_T0001445;transcript_name=HG00140_ch_T0001445;gene_name=ENSG00000310035;ID=exon:HG00140_ch_T0001445:2;Name=ENSG00000310035;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	22214073	22237415	1000	-	.	source_transcript=ENST00000846707.1;source_transcript_name=ENST00000846707;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846707.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG00140_ch_T0001446;gene_id=HG00140_ch_G0000475;Parent=HG00140_ch_G0000475;transcript_name=HG00140_ch_T0001446;gene_name=ENSG00000310035;ID=HG00140_ch_T0001446;Name=ENSG00000310035
HG00140_chrY	CAT	exon	22214073	22214440	.	-	.	source_transcript=ENST00000846707.1;source_transcript_name=ENST00000846707;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG00140_ch_T0001446;gene_id=HG00140_ch_G0000475;Parent=HG00140_ch_T0001446;transcript_name=HG00140_ch_T0001446;gene_name=ENSG00000310035;ID=exon:HG00140_ch_T0001446:0;Name=ENSG00000310035;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22214441	22237104	.	-	.	source_transcript=ENST00000846707.1;source_transcript_name=ENST00000846707;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG00140_ch_T0001446;gene_id=HG00140_ch_G0000475;Parent=HG00140_ch_T0001446;transcript_name=HG00140_ch_T0001446;gene_name=ENSG00000310035;ID=intron:HG00140_ch_T0001446:0;Name=ENSG00000310035;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22237105	22237415	.	-	.	source_transcript=ENST00000846707.1;source_transcript_name=ENST00000846707;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846707.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846707.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG00140_ch_T0001446;gene_id=HG00140_ch_G0000475;Parent=HG00140_ch_T0001446;transcript_name=HG00140_ch_T0001446;gene_name=ENSG00000310035;ID=exon:HG00140_ch_T0001446:1;Name=ENSG00000310035;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	22214148	22237353	1000	-	.	source_transcript=ENST00000846708.1;source_transcript_name=ENST00000846708;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846708.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG00140_ch_T0001447;gene_id=HG00140_ch_G0000475;Parent=HG00140_ch_G0000475;transcript_name=HG00140_ch_T0001447;gene_name=ENSG00000310035;ID=HG00140_ch_T0001447;Name=ENSG00000310035
HG00140_chrY	CAT	exon	22214148	22214440	.	-	.	source_transcript=ENST00000846708.1;source_transcript_name=ENST00000846708;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG00140_ch_T0001447;gene_id=HG00140_ch_G0000475;Parent=HG00140_ch_T0001447;transcript_name=HG00140_ch_T0001447;gene_name=ENSG00000310035;ID=exon:HG00140_ch_T0001447:0;Name=ENSG00000310035;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22214441	22232382	.	-	.	source_transcript=ENST00000846708.1;source_transcript_name=ENST00000846708;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG00140_ch_T0001447;gene_id=HG00140_ch_G0000475;Parent=HG00140_ch_T0001447;transcript_name=HG00140_ch_T0001447;gene_name=ENSG00000310035;ID=intron:HG00140_ch_T0001447:0;Name=ENSG00000310035;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22232383	22232540	.	-	.	source_transcript=ENST00000846708.1;source_transcript_name=ENST00000846708;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG00140_ch_T0001447;gene_id=HG00140_ch_G0000475;Parent=HG00140_ch_T0001447;transcript_name=HG00140_ch_T0001447;gene_name=ENSG00000310035;ID=exon:HG00140_ch_T0001447:1;Name=ENSG00000310035;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22232541	22237104	.	-	.	source_transcript=ENST00000846708.1;source_transcript_name=ENST00000846708;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG00140_ch_T0001447;gene_id=HG00140_ch_G0000475;Parent=HG00140_ch_T0001447;transcript_name=HG00140_ch_T0001447;gene_name=ENSG00000310035;ID=intron:HG00140_ch_T0001447:1;Name=ENSG00000310035;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22237105	22237353	.	-	.	source_transcript=ENST00000846708.1;source_transcript_name=ENST00000846708;source_gene=ENSG00000310035.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310035.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000846708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000846708.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310035;transcript_id=HG00140_ch_T0001447;gene_id=HG00140_ch_G0000475;Parent=HG00140_ch_T0001447;transcript_name=HG00140_ch_T0001447;gene_name=ENSG00000310035;ID=exon:HG00140_ch_T0001447:2;Name=ENSG00000310035;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	22216271	22219439	.	+	.	source_gene_common_name=ENSG00000295422;source_gene=ENSG00000295422.1;gene_id=HG00140_ch_G0000476;gene_biotype=lncRNA;gene_name=ENSG00000295422;gene_sources=liftoff;ID=HG00140_ch_G0000476;Name=ENSG00000295422
HG00140_chrY	CAT	transcript	22216271	22219439	1000	+	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG00140_ch_T0001448;gene_id=HG00140_ch_G0000476;Parent=HG00140_ch_G0000476;transcript_name=HG00140_ch_T0001448;gene_name=ENSG00000295422;ID=HG00140_ch_T0001448;Name=ENSG00000295422
HG00140_chrY	CAT	exon	22216271	22216381	.	+	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG00140_ch_T0001448;gene_id=HG00140_ch_G0000476;Parent=HG00140_ch_T0001448;transcript_name=HG00140_ch_T0001448;gene_name=ENSG00000295422;ID=exon:HG00140_ch_T0001448:0;Name=ENSG00000295422;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22216382	22216498	.	+	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG00140_ch_T0001448;gene_id=HG00140_ch_G0000476;Parent=HG00140_ch_T0001448;transcript_name=HG00140_ch_T0001448;gene_name=ENSG00000295422;ID=intron:HG00140_ch_T0001448:0;Name=ENSG00000295422;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22216499	22216559	.	+	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG00140_ch_T0001448;gene_id=HG00140_ch_G0000476;Parent=HG00140_ch_T0001448;transcript_name=HG00140_ch_T0001448;gene_name=ENSG00000295422;ID=exon:HG00140_ch_T0001448:1;Name=ENSG00000295422;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22216560	22218094	.	+	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG00140_ch_T0001448;gene_id=HG00140_ch_G0000476;Parent=HG00140_ch_T0001448;transcript_name=HG00140_ch_T0001448;gene_name=ENSG00000295422;ID=intron:HG00140_ch_T0001448:1;Name=ENSG00000295422;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22218095	22219439	.	+	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG00140_ch_T0001448;gene_id=HG00140_ch_G0000476;Parent=HG00140_ch_T0001448;transcript_name=HG00140_ch_T0001448;gene_name=ENSG00000295422;ID=exon:HG00140_ch_T0001448:2;Name=ENSG00000295422;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	22236505	22237298	.	-	.	source_gene_common_name=HSFY5P;source_gene=ENSG00000232475.1;gene_id=HG00140_ch_G0000477;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=HSFY5P;gene_sources=liftoff;ID=HG00140_ch_G0000477;Name=HSFY5P
HG00140_chrY	CAT	transcript	22236505	22237298	1000	-	.	source_transcript=ENST00000453726.1;source_transcript_name=HSFY5P-201;source_gene=ENSG00000232475.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232475.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000453726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453726.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY5P;transcript_id=HG00140_ch_T0001449;gene_id=HG00140_ch_G0000477;Parent=HG00140_ch_G0000477;transcript_name=HG00140_ch_T0001449;gene_name=HSFY5P;ID=HG00140_ch_T0001449;Name=HSFY5P
HG00140_chrY	CAT	exon	22236505	22236654	.	-	.	source_transcript=ENST00000453726.1;source_transcript_name=HSFY5P-201;source_gene=ENSG00000232475.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232475.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000453726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY5P;transcript_id=HG00140_ch_T0001449;gene_id=HG00140_ch_G0000477;Parent=HG00140_ch_T0001449;transcript_name=HG00140_ch_T0001449;gene_name=HSFY5P;ID=exon:HG00140_ch_T0001449:0;Name=HSFY5P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22236655	22237139	.	-	.	source_transcript=ENST00000453726.1;source_transcript_name=HSFY5P-201;source_gene=ENSG00000232475.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232475.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000453726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY5P;transcript_id=HG00140_ch_T0001449;gene_id=HG00140_ch_G0000477;Parent=HG00140_ch_T0001449;transcript_name=HG00140_ch_T0001449;gene_name=HSFY5P;ID=intron:HG00140_ch_T0001449:0;Name=HSFY5P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22237140	22237298	.	-	.	source_transcript=ENST00000453726.1;source_transcript_name=HSFY5P-201;source_gene=ENSG00000232475.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000232475.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000453726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453726.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY5P;transcript_id=HG00140_ch_T0001449;gene_id=HG00140_ch_G0000477;Parent=HG00140_ch_T0001449;transcript_name=HG00140_ch_T0001449;gene_name=HSFY5P;ID=exon:HG00140_ch_T0001449:1;Name=HSFY5P;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	22237706	22246064	.	-	.	source_gene_common_name=USP9YP17;source_gene=ENSG00000229553.1;alternative_source_transcripts=ENST00000444617.1;gene_id=HG00140_ch_G0000478;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP17;gene_sources=liftoff;ID=HG00140_ch_G0000478;Name=USP9YP17
HG00140_chrY	CAT	transcript	22237706	22246064	1000	-	.	source_transcript=ENST00000444617.1;source_transcript_name=USP9YP17-201;source_gene=ENSG00000229553.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229553.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444617.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP17;alternative_source_transcripts=ENST00000444617.1;transcript_id=HG00140_ch_T0001450;gene_id=HG00140_ch_G0000478;Parent=HG00140_ch_G0000478;transcript_name=HG00140_ch_T0001450;gene_name=USP9YP17;ID=HG00140_ch_T0001450;Name=USP9YP17
HG00140_chrY	CAT	exon	22237706	22237744	.	-	.	source_transcript=ENST00000444617.1;source_transcript_name=USP9YP17-201;source_gene=ENSG00000229553.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229553.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP17;alternative_source_transcripts=ENST00000444617.1;transcript_id=HG00140_ch_T0001450;gene_id=HG00140_ch_G0000478;Parent=HG00140_ch_T0001450;transcript_name=HG00140_ch_T0001450;gene_name=USP9YP17;ID=exon:HG00140_ch_T0001450:0;Name=USP9YP17;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22237745	22239460	.	-	.	source_transcript=ENST00000444617.1;source_transcript_name=USP9YP17-201;source_gene=ENSG00000229553.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229553.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP17;alternative_source_transcripts=ENST00000444617.1;transcript_id=HG00140_ch_T0001450;gene_id=HG00140_ch_G0000478;Parent=HG00140_ch_T0001450;transcript_name=HG00140_ch_T0001450;gene_name=USP9YP17;ID=intron:HG00140_ch_T0001450:0;Name=USP9YP17;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22239461	22239589	.	-	.	source_transcript=ENST00000444617.1;source_transcript_name=USP9YP17-201;source_gene=ENSG00000229553.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229553.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP17;alternative_source_transcripts=ENST00000444617.1;transcript_id=HG00140_ch_T0001450;gene_id=HG00140_ch_G0000478;Parent=HG00140_ch_T0001450;transcript_name=HG00140_ch_T0001450;gene_name=USP9YP17;ID=exon:HG00140_ch_T0001450:1;Name=USP9YP17;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22239590	22241947	.	-	.	source_transcript=ENST00000444617.1;source_transcript_name=USP9YP17-201;source_gene=ENSG00000229553.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229553.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP17;alternative_source_transcripts=ENST00000444617.1;transcript_id=HG00140_ch_T0001450;gene_id=HG00140_ch_G0000478;Parent=HG00140_ch_T0001450;transcript_name=HG00140_ch_T0001450;gene_name=USP9YP17;ID=intron:HG00140_ch_T0001450:1;Name=USP9YP17;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22241948	22242136	.	-	.	source_transcript=ENST00000444617.1;source_transcript_name=USP9YP17-201;source_gene=ENSG00000229553.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229553.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP17;alternative_source_transcripts=ENST00000444617.1;transcript_id=HG00140_ch_T0001450;gene_id=HG00140_ch_G0000478;Parent=HG00140_ch_T0001450;transcript_name=HG00140_ch_T0001450;gene_name=USP9YP17;ID=exon:HG00140_ch_T0001450:2;Name=USP9YP17;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22242137	22243922	.	-	.	source_transcript=ENST00000444617.1;source_transcript_name=USP9YP17-201;source_gene=ENSG00000229553.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229553.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP17;alternative_source_transcripts=ENST00000444617.1;transcript_id=HG00140_ch_T0001450;gene_id=HG00140_ch_G0000478;Parent=HG00140_ch_T0001450;transcript_name=HG00140_ch_T0001450;gene_name=USP9YP17;ID=intron:HG00140_ch_T0001450:2;Name=USP9YP17;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22243923	22244040	.	-	.	source_transcript=ENST00000444617.1;source_transcript_name=USP9YP17-201;source_gene=ENSG00000229553.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229553.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP17;alternative_source_transcripts=ENST00000444617.1;transcript_id=HG00140_ch_T0001450;gene_id=HG00140_ch_G0000478;Parent=HG00140_ch_T0001450;transcript_name=HG00140_ch_T0001450;gene_name=USP9YP17;ID=exon:HG00140_ch_T0001450:3;Name=USP9YP17;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22244041	22245843	.	-	.	source_transcript=ENST00000444617.1;source_transcript_name=USP9YP17-201;source_gene=ENSG00000229553.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229553.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP17;alternative_source_transcripts=ENST00000444617.1;transcript_id=HG00140_ch_T0001450;gene_id=HG00140_ch_G0000478;Parent=HG00140_ch_T0001450;transcript_name=HG00140_ch_T0001450;gene_name=USP9YP17;ID=intron:HG00140_ch_T0001450:3;Name=USP9YP17;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22245844	22246064	.	-	.	source_transcript=ENST00000444617.1;source_transcript_name=USP9YP17-201;source_gene=ENSG00000229553.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229553.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444617.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP17;alternative_source_transcripts=ENST00000444617.1;transcript_id=HG00140_ch_T0001450;gene_id=HG00140_ch_G0000478;Parent=HG00140_ch_T0001450;transcript_name=HG00140_ch_T0001450;gene_name=USP9YP17;ID=exon:HG00140_ch_T0001450:4;Name=USP9YP17;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	22252649	22253663	.	+	.	source_gene_common_name=CDY12P;source_gene=ENSG00000228850.1;alternative_source_transcripts=ENST00000440679.1;gene_id=HG00140_ch_G0000479;gene_biotype=unprocessed_pseudogene;gene_name=CDY12P;gene_sources=liftoff;ID=HG00140_ch_G0000479;Name=CDY12P
HG00140_chrY	CAT	transcript	22252649	22253663	1000	+	.	source_transcript=ENST00000440679.1;source_transcript_name=CDY12P-201;source_gene=ENSG00000228850.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228850.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440679.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY12P;alternative_source_transcripts=ENST00000440679.1;transcript_id=HG00140_ch_T0001451;gene_id=HG00140_ch_G0000479;Parent=HG00140_ch_G0000479;transcript_name=HG00140_ch_T0001451;gene_name=CDY12P;ID=HG00140_ch_T0001451;Name=CDY12P
HG00140_chrY	CAT	exon	22252649	22253663	.	+	.	source_transcript=ENST00000440679.1;source_transcript_name=CDY12P-201;source_gene=ENSG00000228850.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228850.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440679.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440679.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY12P;alternative_source_transcripts=ENST00000440679.1;transcript_id=HG00140_ch_T0001451;gene_id=HG00140_ch_G0000479;Parent=HG00140_ch_T0001451;transcript_name=HG00140_ch_T0001451;gene_name=CDY12P;ID=exon:HG00140_ch_T0001451:0;Name=CDY12P;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	22256771	22257102	.	+	.	source_gene_common_name=ELOCP15;source_gene=ENSG00000232029.1;alternative_source_transcripts=ENST00000442090.1;gene_id=HG00140_ch_G0000480;gene_biotype=processed_pseudogene;gene_name=ELOCP15;gene_sources=liftoff;ID=HG00140_ch_G0000480;Name=ELOCP15
HG00140_chrY	CAT	transcript	22256771	22257102	1000	+	.	source_transcript=ENST00000442090.1;source_transcript_name=ELOCP15-201;source_gene=ENSG00000232029.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232029.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000442090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442090.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP15;alternative_source_transcripts=ENST00000442090.1;transcript_id=HG00140_ch_T0001452;gene_id=HG00140_ch_G0000480;Parent=HG00140_ch_G0000480;transcript_name=HG00140_ch_T0001452;gene_name=ELOCP15;ID=HG00140_ch_T0001452;Name=ELOCP15
HG00140_chrY	CAT	exon	22256771	22257102	.	+	.	source_transcript=ENST00000442090.1;source_transcript_name=ELOCP15-201;source_gene=ENSG00000232029.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232029.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000442090.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442090.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP15;alternative_source_transcripts=ENST00000442090.1;transcript_id=HG00140_ch_T0001452;gene_id=HG00140_ch_G0000480;Parent=HG00140_ch_T0001452;transcript_name=HG00140_ch_T0001452;gene_name=ELOCP15;ID=exon:HG00140_ch_T0001452:0;Name=ELOCP15;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	22259707	22335430	.	-	.	source_gene_common_name=ENSG00000236951;source_gene=ENSG00000236951.7;alternative_source_transcripts=ENST00000303804.6;gene_id=HG00140_ch_G0000481;gene_biotype=lncRNA;gene_name=ENSG00000236951;gene_sources=liftoff;ID=HG00140_ch_G0000481;Name=ENSG00000236951
HG00140_chrY	CAT	transcript	22259707	22290321	1000	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6;transcript_id=HG00140_ch_T0001453;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_G0000481;transcript_name=HG00140_ch_T0001453;gene_name=ENSG00000236951;ID=HG00140_ch_T0001453;Name=ENSG00000236951
HG00140_chrY	CAT	exon	22259707	22260532	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6;transcript_id=HG00140_ch_T0001453;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001453;transcript_name=HG00140_ch_T0001453;gene_name=ENSG00000236951;ID=exon:HG00140_ch_T0001453:0;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22260533	22270030	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6;transcript_id=HG00140_ch_T0001453;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001453;transcript_name=HG00140_ch_T0001453;gene_name=ENSG00000236951;ID=intron:HG00140_ch_T0001453:0;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22270031	22270146	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6;transcript_id=HG00140_ch_T0001453;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001453;transcript_name=HG00140_ch_T0001453;gene_name=ENSG00000236951;ID=exon:HG00140_ch_T0001453:1;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22270147	22272721	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6;transcript_id=HG00140_ch_T0001453;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001453;transcript_name=HG00140_ch_T0001453;gene_name=ENSG00000236951;ID=intron:HG00140_ch_T0001453:1;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22272722	22272842	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6;transcript_id=HG00140_ch_T0001453;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001453;transcript_name=HG00140_ch_T0001453;gene_name=ENSG00000236951;ID=exon:HG00140_ch_T0001453:2;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22272843	22283682	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6;transcript_id=HG00140_ch_T0001453;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001453;transcript_name=HG00140_ch_T0001453;gene_name=ENSG00000236951;ID=intron:HG00140_ch_T0001453:2;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22283683	22283769	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6;transcript_id=HG00140_ch_T0001453;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001453;transcript_name=HG00140_ch_T0001453;gene_name=ENSG00000236951;ID=exon:HG00140_ch_T0001453:3;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22283770	22283870	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6;transcript_id=HG00140_ch_T0001453;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001453;transcript_name=HG00140_ch_T0001453;gene_name=ENSG00000236951;ID=intron:HG00140_ch_T0001453:3;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22283871	22283959	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6;transcript_id=HG00140_ch_T0001453;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001453;transcript_name=HG00140_ch_T0001453;gene_name=ENSG00000236951;ID=exon:HG00140_ch_T0001453:4;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22283960	22290056	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6;transcript_id=HG00140_ch_T0001453;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001453;transcript_name=HG00140_ch_T0001453;gene_name=ENSG00000236951;ID=intron:HG00140_ch_T0001453:4;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22290057	22290321	.	-	.	source_transcript=ENST00000303804.6;source_transcript_name=ENST00000303804;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303804.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303804.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000303804.6;transcript_id=HG00140_ch_T0001453;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001453;transcript_name=HG00140_ch_T0001453;gene_name=ENSG00000236951;ID=exon:HG00140_ch_T0001453:5;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	22259707	22290321	1000	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2;transcript_id=HG00140_ch_T0001454;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_G0000481;transcript_name=HG00140_ch_T0001454;gene_name=ENSG00000236951;ID=HG00140_ch_T0001454;Name=ENSG00000236951
HG00140_chrY	CAT	exon	22259707	22260532	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2;transcript_id=HG00140_ch_T0001454;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001454;transcript_name=HG00140_ch_T0001454;gene_name=ENSG00000236951;ID=exon:HG00140_ch_T0001454:0;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22260533	22261594	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2;transcript_id=HG00140_ch_T0001454;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001454;transcript_name=HG00140_ch_T0001454;gene_name=ENSG00000236951;ID=intron:HG00140_ch_T0001454:0;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22261595	22261709	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2;transcript_id=HG00140_ch_T0001454;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001454;transcript_name=HG00140_ch_T0001454;gene_name=ENSG00000236951;ID=exon:HG00140_ch_T0001454:1;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22261710	22270030	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2;transcript_id=HG00140_ch_T0001454;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001454;transcript_name=HG00140_ch_T0001454;gene_name=ENSG00000236951;ID=intron:HG00140_ch_T0001454:1;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22270031	22270146	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2;transcript_id=HG00140_ch_T0001454;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001454;transcript_name=HG00140_ch_T0001454;gene_name=ENSG00000236951;ID=exon:HG00140_ch_T0001454:2;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22270147	22272721	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2;transcript_id=HG00140_ch_T0001454;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001454;transcript_name=HG00140_ch_T0001454;gene_name=ENSG00000236951;ID=intron:HG00140_ch_T0001454:2;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22272722	22272842	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2;transcript_id=HG00140_ch_T0001454;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001454;transcript_name=HG00140_ch_T0001454;gene_name=ENSG00000236951;ID=exon:HG00140_ch_T0001454:3;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22272843	22283682	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2;transcript_id=HG00140_ch_T0001454;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001454;transcript_name=HG00140_ch_T0001454;gene_name=ENSG00000236951;ID=intron:HG00140_ch_T0001454:3;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22283683	22283769	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2;transcript_id=HG00140_ch_T0001454;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001454;transcript_name=HG00140_ch_T0001454;gene_name=ENSG00000236951;ID=exon:HG00140_ch_T0001454:4;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22283770	22283870	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2;transcript_id=HG00140_ch_T0001454;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001454;transcript_name=HG00140_ch_T0001454;gene_name=ENSG00000236951;ID=intron:HG00140_ch_T0001454:4;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22283871	22283959	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2;transcript_id=HG00140_ch_T0001454;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001454;transcript_name=HG00140_ch_T0001454;gene_name=ENSG00000236951;ID=exon:HG00140_ch_T0001454:5;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22283960	22290056	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2;transcript_id=HG00140_ch_T0001454;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001454;transcript_name=HG00140_ch_T0001454;gene_name=ENSG00000236951;ID=intron:HG00140_ch_T0001454:5;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22290057	22290321	.	-	.	source_transcript=ENST00000472391.2;source_transcript_name=ENST00000472391;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000472391.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000472391.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000472391.2;transcript_id=HG00140_ch_T0001454;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001454;transcript_name=HG00140_ch_T0001454;gene_name=ENSG00000236951;ID=exon:HG00140_ch_T0001454:6;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	22288764	22293821	1000	-	.	source_transcript=ENST00000417910.5;source_transcript_name=ENST00000417910;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417910.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000417910.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000417910.5;transcript_id=HG00140_ch_T0001455;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_G0000481;transcript_name=HG00140_ch_T0001455;gene_name=ENSG00000236951;ID=HG00140_ch_T0001455;Name=ENSG00000236951
HG00140_chrY	CAT	exon	22288764	22289005	.	-	.	source_transcript=ENST00000417910.5;source_transcript_name=ENST00000417910;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417910.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000417910.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000417910.5;transcript_id=HG00140_ch_T0001455;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001455;transcript_name=HG00140_ch_T0001455;gene_name=ENSG00000236951;ID=exon:HG00140_ch_T0001455:0;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22289006	22290056	.	-	.	source_transcript=ENST00000417910.5;source_transcript_name=ENST00000417910;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417910.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000417910.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000417910.5;transcript_id=HG00140_ch_T0001455;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001455;transcript_name=HG00140_ch_T0001455;gene_name=ENSG00000236951;ID=intron:HG00140_ch_T0001455:0;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22290057	22290321	.	-	.	source_transcript=ENST00000417910.5;source_transcript_name=ENST00000417910;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417910.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000417910.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000417910.5;transcript_id=HG00140_ch_T0001455;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001455;transcript_name=HG00140_ch_T0001455;gene_name=ENSG00000236951;ID=exon:HG00140_ch_T0001455:1;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22290322	22290836	.	-	.	source_transcript=ENST00000417910.5;source_transcript_name=ENST00000417910;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417910.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000417910.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000417910.5;transcript_id=HG00140_ch_T0001455;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001455;transcript_name=HG00140_ch_T0001455;gene_name=ENSG00000236951;ID=intron:HG00140_ch_T0001455:1;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22290837	22290954	.	-	.	source_transcript=ENST00000417910.5;source_transcript_name=ENST00000417910;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417910.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000417910.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000417910.5;transcript_id=HG00140_ch_T0001455;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001455;transcript_name=HG00140_ch_T0001455;gene_name=ENSG00000236951;ID=exon:HG00140_ch_T0001455:2;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22290955	22293701	.	-	.	source_transcript=ENST00000417910.5;source_transcript_name=ENST00000417910;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417910.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000417910.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000417910.5;transcript_id=HG00140_ch_T0001455;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001455;transcript_name=HG00140_ch_T0001455;gene_name=ENSG00000236951;ID=intron:HG00140_ch_T0001455:2;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22293702	22293821	.	-	.	source_transcript=ENST00000417910.5;source_transcript_name=ENST00000417910;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417910.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000417910.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000417910.5;transcript_id=HG00140_ch_T0001455;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001455;transcript_name=HG00140_ch_T0001455;gene_name=ENSG00000236951;ID=exon:HG00140_ch_T0001455:3;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	22289457	22309419	1000	-	.	source_transcript=ENST00000775784.1;source_transcript_name=ENST00000775784;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000775784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000775784.1;transcript_score=299.916;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000775784.1;transcript_id=HG00140_ch_T0001456;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_G0000481;transcript_name=HG00140_ch_T0001456;gene_name=ENSG00000236951;ID=HG00140_ch_T0001456;Name=ENSG00000236951
HG00140_chrY	CAT	exon	22289457	22290321	.	-	.	source_transcript=ENST00000775784.1;source_transcript_name=ENST00000775784;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000775784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000775784.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000775784.1;transcript_id=HG00140_ch_T0001456;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001456;transcript_name=HG00140_ch_T0001456;gene_name=ENSG00000236951;ID=exon:HG00140_ch_T0001456:0;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22290322	22290836	.	-	.	source_transcript=ENST00000775784.1;source_transcript_name=ENST00000775784;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000775784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000775784.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000775784.1;transcript_id=HG00140_ch_T0001456;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001456;transcript_name=HG00140_ch_T0001456;gene_name=ENSG00000236951;ID=intron:HG00140_ch_T0001456:0;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22290837	22290958	.	-	.	source_transcript=ENST00000775784.1;source_transcript_name=ENST00000775784;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000775784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000775784.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000775784.1;transcript_id=HG00140_ch_T0001456;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001456;transcript_name=HG00140_ch_T0001456;gene_name=ENSG00000236951;ID=exon:HG00140_ch_T0001456:1;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22290959	22309222	.	-	.	source_transcript=ENST00000775784.1;source_transcript_name=ENST00000775784;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000775784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000775784.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000775784.1;transcript_id=HG00140_ch_T0001456;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001456;transcript_name=HG00140_ch_T0001456;gene_name=ENSG00000236951;ID=intron:HG00140_ch_T0001456:1;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22309223	22309419	.	-	.	source_transcript=ENST00000775784.1;source_transcript_name=ENST00000775784;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000775784.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000775784.1;transcript_score=299.916;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000775784.1;transcript_id=HG00140_ch_T0001456;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001456;transcript_name=HG00140_ch_T0001456;gene_name=ENSG00000236951;ID=exon:HG00140_ch_T0001456:2;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	22289644	22335430	1000	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00140_ch_T0001457;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_G0000481;transcript_name=HG00140_ch_T0001457;gene_name=ENSG00000236951;ID=HG00140_ch_T0001457;Name=ENSG00000236951
HG00140_chrY	CAT	exon	22289644	22290321	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00140_ch_T0001457;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001457;transcript_name=HG00140_ch_T0001457;gene_name=ENSG00000236951;ID=exon:HG00140_ch_T0001457:0;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22290322	22290836	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00140_ch_T0001457;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001457;transcript_name=HG00140_ch_T0001457;gene_name=ENSG00000236951;ID=intron:HG00140_ch_T0001457:0;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22290837	22290954	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00140_ch_T0001457;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001457;transcript_name=HG00140_ch_T0001457;gene_name=ENSG00000236951;ID=exon:HG00140_ch_T0001457:1;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22290955	22291498	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00140_ch_T0001457;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001457;transcript_name=HG00140_ch_T0001457;gene_name=ENSG00000236951;ID=intron:HG00140_ch_T0001457:1;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22291499	22291695	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00140_ch_T0001457;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001457;transcript_name=HG00140_ch_T0001457;gene_name=ENSG00000236951;ID=exon:HG00140_ch_T0001457:2;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22291696	22291815	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00140_ch_T0001457;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001457;transcript_name=HG00140_ch_T0001457;gene_name=ENSG00000236951;ID=intron:HG00140_ch_T0001457:2;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22291816	22291901	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00140_ch_T0001457;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001457;transcript_name=HG00140_ch_T0001457;gene_name=ENSG00000236951;ID=exon:HG00140_ch_T0001457:3;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22291902	22293701	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00140_ch_T0001457;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001457;transcript_name=HG00140_ch_T0001457;gene_name=ENSG00000236951;ID=intron:HG00140_ch_T0001457:3;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22293702	22294037	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00140_ch_T0001457;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001457;transcript_name=HG00140_ch_T0001457;gene_name=ENSG00000236951;ID=exon:HG00140_ch_T0001457:4;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22294038	22295503	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00140_ch_T0001457;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001457;transcript_name=HG00140_ch_T0001457;gene_name=ENSG00000236951;ID=intron:HG00140_ch_T0001457:4;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22295504	22295593	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00140_ch_T0001457;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001457;transcript_name=HG00140_ch_T0001457;gene_name=ENSG00000236951;ID=exon:HG00140_ch_T0001457:5;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22295594	22309222	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00140_ch_T0001457;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001457;transcript_name=HG00140_ch_T0001457;gene_name=ENSG00000236951;ID=intron:HG00140_ch_T0001457:5;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22309223	22309576	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00140_ch_T0001457;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001457;transcript_name=HG00140_ch_T0001457;gene_name=ENSG00000236951;ID=exon:HG00140_ch_T0001457:6;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22309577	22310006	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00140_ch_T0001457;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001457;transcript_name=HG00140_ch_T0001457;gene_name=ENSG00000236951;ID=intron:HG00140_ch_T0001457:6;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22310007	22310125	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00140_ch_T0001457;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001457;transcript_name=HG00140_ch_T0001457;gene_name=ENSG00000236951;ID=exon:HG00140_ch_T0001457:7;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22310126	22317305	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00140_ch_T0001457;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001457;transcript_name=HG00140_ch_T0001457;gene_name=ENSG00000236951;ID=intron:HG00140_ch_T0001457:7;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22317306	22317391	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00140_ch_T0001457;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001457;transcript_name=HG00140_ch_T0001457;gene_name=ENSG00000236951;ID=exon:HG00140_ch_T0001457:8;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22317392	22317699	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00140_ch_T0001457;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001457;transcript_name=HG00140_ch_T0001457;gene_name=ENSG00000236951;ID=intron:HG00140_ch_T0001457:8;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22317700	22317922	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00140_ch_T0001457;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001457;transcript_name=HG00140_ch_T0001457;gene_name=ENSG00000236951;ID=exon:HG00140_ch_T0001457:9;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22317923	22327897	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00140_ch_T0001457;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001457;transcript_name=HG00140_ch_T0001457;gene_name=ENSG00000236951;ID=intron:HG00140_ch_T0001457:9;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22327898	22328038	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00140_ch_T0001457;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001457;transcript_name=HG00140_ch_T0001457;gene_name=ENSG00000236951;ID=exon:HG00140_ch_T0001457:10;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22328039	22334585	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00140_ch_T0001457;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001457;transcript_name=HG00140_ch_T0001457;gene_name=ENSG00000236951;ID=intron:HG00140_ch_T0001457:10;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22334586	22334895	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00140_ch_T0001457;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001457;transcript_name=HG00140_ch_T0001457;gene_name=ENSG00000236951;ID=exon:HG00140_ch_T0001457:11;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22334896	22335229	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00140_ch_T0001457;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001457;transcript_name=HG00140_ch_T0001457;gene_name=ENSG00000236951;ID=intron:HG00140_ch_T0001457:11;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22335230	22335430	.	-	.	source_transcript=ENST00000419158.1;source_transcript_name=ENST00000419158;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000419158.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419158.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000419158.1;transcript_id=HG00140_ch_T0001457;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001457;transcript_name=HG00140_ch_T0001457;gene_name=ENSG00000236951;ID=exon:HG00140_ch_T0001457:12;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	22307417	22309429	1000	-	.	source_transcript=ENST00000775785.1;source_transcript_name=ENST00000775785;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000775785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000775785.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000775785.1;transcript_id=HG00140_ch_T0001458;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_G0000481;transcript_name=HG00140_ch_T0001458;gene_name=ENSG00000236951;ID=HG00140_ch_T0001458;Name=ENSG00000236951
HG00140_chrY	CAT	exon	22307417	22307626	.	-	.	source_transcript=ENST00000775785.1;source_transcript_name=ENST00000775785;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000775785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000775785.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000775785.1;transcript_id=HG00140_ch_T0001458;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001458;transcript_name=HG00140_ch_T0001458;gene_name=ENSG00000236951;ID=exon:HG00140_ch_T0001458:0;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22307627	22309222	.	-	.	source_transcript=ENST00000775785.1;source_transcript_name=ENST00000775785;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000775785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000775785.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000775785.1;transcript_id=HG00140_ch_T0001458;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001458;transcript_name=HG00140_ch_T0001458;gene_name=ENSG00000236951;ID=intron:HG00140_ch_T0001458:0;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22309223	22309429	.	-	.	source_transcript=ENST00000775785.1;source_transcript_name=ENST00000775785;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000775785.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000775785.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000775785.1;transcript_id=HG00140_ch_T0001458;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001458;transcript_name=HG00140_ch_T0001458;gene_name=ENSG00000236951;ID=exon:HG00140_ch_T0001458:1;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	22324337	22335356	1000	-	.	source_transcript=ENST00000774613.1;source_transcript_name=ENST00000774613;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774613.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000774613.1;transcript_id=HG00140_ch_T0001460;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_G0000481;transcript_name=HG00140_ch_T0001460;gene_name=ENSG00000236951;ID=HG00140_ch_T0001460;Name=ENSG00000236951
HG00140_chrY	CAT	exon	22324337	22325131	.	-	.	source_transcript=ENST00000774613.1;source_transcript_name=ENST00000774613;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000774613.1;transcript_id=HG00140_ch_T0001460;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001460;transcript_name=HG00140_ch_T0001460;gene_name=ENSG00000236951;ID=exon:HG00140_ch_T0001460:0;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22325132	22327897	.	-	.	source_transcript=ENST00000774613.1;source_transcript_name=ENST00000774613;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000774613.1;transcript_id=HG00140_ch_T0001460;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001460;transcript_name=HG00140_ch_T0001460;gene_name=ENSG00000236951;ID=intron:HG00140_ch_T0001460:0;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22327898	22328038	.	-	.	source_transcript=ENST00000774613.1;source_transcript_name=ENST00000774613;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000774613.1;transcript_id=HG00140_ch_T0001460;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001460;transcript_name=HG00140_ch_T0001460;gene_name=ENSG00000236951;ID=exon:HG00140_ch_T0001460:1;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22328039	22335229	.	-	.	source_transcript=ENST00000774613.1;source_transcript_name=ENST00000774613;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000774613.1;transcript_id=HG00140_ch_T0001460;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001460;transcript_name=HG00140_ch_T0001460;gene_name=ENSG00000236951;ID=intron:HG00140_ch_T0001460:1;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22335230	22335356	.	-	.	source_transcript=ENST00000774613.1;source_transcript_name=ENST00000774613;source_gene=ENSG00000236951.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000236951.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774613.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774613.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236951;alternative_source_transcripts=ENST00000774613.1;transcript_id=HG00140_ch_T0001460;gene_id=HG00140_ch_G0000481;Parent=HG00140_ch_T0001460;transcript_name=HG00140_ch_T0001460;gene_name=ENSG00000236951;ID=exon:HG00140_ch_T0001460:2;Name=ENSG00000236951;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	22319885	22334777	.	+	.	source_gene_common_name=TTTY6B;source_gene=ENSG00000131548.8;alternative_source_transcripts=ENST00000253848.4;gene_id=HG00140_ch_G0000482;gene_biotype=lncRNA;gene_name=TTTY6B;gene_sources=liftoff;ID=HG00140_ch_G0000482;Name=TTTY6B
HG00140_chrY	CAT	transcript	22319885	22334777	1000	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4;transcript_id=HG00140_ch_T0001459;gene_id=HG00140_ch_G0000482;Parent=HG00140_ch_G0000482;transcript_name=HG00140_ch_T0001459;gene_name=TTTY6B;ID=HG00140_ch_T0001459;Name=TTTY6B
HG00140_chrY	CAT	exon	22319885	22319939	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4;transcript_id=HG00140_ch_T0001459;gene_id=HG00140_ch_G0000482;Parent=HG00140_ch_T0001459;transcript_name=HG00140_ch_T0001459;gene_name=TTTY6B;ID=exon:HG00140_ch_T0001459:0;Name=TTTY6B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22319940	22322326	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4;transcript_id=HG00140_ch_T0001459;gene_id=HG00140_ch_G0000482;Parent=HG00140_ch_T0001459;transcript_name=HG00140_ch_T0001459;gene_name=TTTY6B;ID=intron:HG00140_ch_T0001459:0;Name=TTTY6B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22322327	22322400	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4;transcript_id=HG00140_ch_T0001459;gene_id=HG00140_ch_G0000482;Parent=HG00140_ch_T0001459;transcript_name=HG00140_ch_T0001459;gene_name=TTTY6B;ID=exon:HG00140_ch_T0001459:1;Name=TTTY6B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22322401	22327141	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4;transcript_id=HG00140_ch_T0001459;gene_id=HG00140_ch_G0000482;Parent=HG00140_ch_T0001459;transcript_name=HG00140_ch_T0001459;gene_name=TTTY6B;ID=intron:HG00140_ch_T0001459:1;Name=TTTY6B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22327142	22327303	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4;transcript_id=HG00140_ch_T0001459;gene_id=HG00140_ch_G0000482;Parent=HG00140_ch_T0001459;transcript_name=HG00140_ch_T0001459;gene_name=TTTY6B;ID=exon:HG00140_ch_T0001459:2;Name=TTTY6B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22327304	22329585	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4;transcript_id=HG00140_ch_T0001459;gene_id=HG00140_ch_G0000482;Parent=HG00140_ch_T0001459;transcript_name=HG00140_ch_T0001459;gene_name=TTTY6B;ID=intron:HG00140_ch_T0001459:2;Name=TTTY6B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22329586	22329746	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4;transcript_id=HG00140_ch_T0001459;gene_id=HG00140_ch_G0000482;Parent=HG00140_ch_T0001459;transcript_name=HG00140_ch_T0001459;gene_name=TTTY6B;ID=exon:HG00140_ch_T0001459:3;Name=TTTY6B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22329747	22332911	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4;transcript_id=HG00140_ch_T0001459;gene_id=HG00140_ch_G0000482;Parent=HG00140_ch_T0001459;transcript_name=HG00140_ch_T0001459;gene_name=TTTY6B;ID=intron:HG00140_ch_T0001459:3;Name=TTTY6B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22332912	22333025	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4;transcript_id=HG00140_ch_T0001459;gene_id=HG00140_ch_G0000482;Parent=HG00140_ch_T0001459;transcript_name=HG00140_ch_T0001459;gene_name=TTTY6B;ID=exon:HG00140_ch_T0001459:4;Name=TTTY6B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22333026	22333243	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4;transcript_id=HG00140_ch_T0001459;gene_id=HG00140_ch_G0000482;Parent=HG00140_ch_T0001459;transcript_name=HG00140_ch_T0001459;gene_name=TTTY6B;ID=intron:HG00140_ch_T0001459:4;Name=TTTY6B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22333244	22333381	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4;transcript_id=HG00140_ch_T0001459;gene_id=HG00140_ch_G0000482;Parent=HG00140_ch_T0001459;transcript_name=HG00140_ch_T0001459;gene_name=TTTY6B;ID=exon:HG00140_ch_T0001459:5;Name=TTTY6B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22333382	22334538	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4;transcript_id=HG00140_ch_T0001459;gene_id=HG00140_ch_G0000482;Parent=HG00140_ch_T0001459;transcript_name=HG00140_ch_T0001459;gene_name=TTTY6B;ID=intron:HG00140_ch_T0001459:5;Name=TTTY6B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22334539	22334777	.	+	.	source_transcript=ENST00000253848.4;source_transcript_name=TTTY6B-201;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253848.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253848.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000253848.4;transcript_id=HG00140_ch_T0001459;gene_id=HG00140_ch_G0000482;Parent=HG00140_ch_T0001459;transcript_name=HG00140_ch_T0001459;gene_name=TTTY6B;ID=exon:HG00140_ch_T0001459:6;Name=TTTY6B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	22329212	22334777	1000	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1;transcript_id=HG00140_ch_T0001461;gene_id=HG00140_ch_G0000482;Parent=HG00140_ch_G0000482;transcript_name=HG00140_ch_T0001461;gene_name=TTTY6B;ID=HG00140_ch_T0001461;Name=TTTY6B
HG00140_chrY	CAT	exon	22329212	22329341	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1;transcript_id=HG00140_ch_T0001461;gene_id=HG00140_ch_G0000482;Parent=HG00140_ch_T0001461;transcript_name=HG00140_ch_T0001461;gene_name=TTTY6B;ID=exon:HG00140_ch_T0001461:0;Name=TTTY6B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22329342	22329585	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1;transcript_id=HG00140_ch_T0001461;gene_id=HG00140_ch_G0000482;Parent=HG00140_ch_T0001461;transcript_name=HG00140_ch_T0001461;gene_name=TTTY6B;ID=intron:HG00140_ch_T0001461:0;Name=TTTY6B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22329586	22329746	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1;transcript_id=HG00140_ch_T0001461;gene_id=HG00140_ch_G0000482;Parent=HG00140_ch_T0001461;transcript_name=HG00140_ch_T0001461;gene_name=TTTY6B;ID=exon:HG00140_ch_T0001461:1;Name=TTTY6B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22329747	22332911	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1;transcript_id=HG00140_ch_T0001461;gene_id=HG00140_ch_G0000482;Parent=HG00140_ch_T0001461;transcript_name=HG00140_ch_T0001461;gene_name=TTTY6B;ID=intron:HG00140_ch_T0001461:1;Name=TTTY6B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22332912	22333025	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1;transcript_id=HG00140_ch_T0001461;gene_id=HG00140_ch_G0000482;Parent=HG00140_ch_T0001461;transcript_name=HG00140_ch_T0001461;gene_name=TTTY6B;ID=exon:HG00140_ch_T0001461:2;Name=TTTY6B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22333026	22333243	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1;transcript_id=HG00140_ch_T0001461;gene_id=HG00140_ch_G0000482;Parent=HG00140_ch_T0001461;transcript_name=HG00140_ch_T0001461;gene_name=TTTY6B;ID=intron:HG00140_ch_T0001461:2;Name=TTTY6B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22333244	22333381	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1;transcript_id=HG00140_ch_T0001461;gene_id=HG00140_ch_G0000482;Parent=HG00140_ch_T0001461;transcript_name=HG00140_ch_T0001461;gene_name=TTTY6B;ID=exon:HG00140_ch_T0001461:3;Name=TTTY6B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22333382	22333499	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1;transcript_id=HG00140_ch_T0001461;gene_id=HG00140_ch_G0000482;Parent=HG00140_ch_T0001461;transcript_name=HG00140_ch_T0001461;gene_name=TTTY6B;ID=intron:HG00140_ch_T0001461:3;Name=TTTY6B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22333500	22333590	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1;transcript_id=HG00140_ch_T0001461;gene_id=HG00140_ch_G0000482;Parent=HG00140_ch_T0001461;transcript_name=HG00140_ch_T0001461;gene_name=TTTY6B;ID=exon:HG00140_ch_T0001461:4;Name=TTTY6B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22333591	22334538	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1;transcript_id=HG00140_ch_T0001461;gene_id=HG00140_ch_G0000482;Parent=HG00140_ch_T0001461;transcript_name=HG00140_ch_T0001461;gene_name=TTTY6B;ID=intron:HG00140_ch_T0001461:4;Name=TTTY6B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22334539	22334777	.	+	.	source_transcript=ENST00000774327.1;source_transcript_name=TTTY6B-202;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774327.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774327.1;transcript_id=HG00140_ch_T0001461;gene_id=HG00140_ch_G0000482;Parent=HG00140_ch_T0001461;transcript_name=HG00140_ch_T0001461;gene_name=TTTY6B;ID=exon:HG00140_ch_T0001461:5;Name=TTTY6B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	22330651	22334775	1000	+	.	source_transcript=ENST00000774328.1;source_transcript_name=TTTY6B-203;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774328.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774328.1;transcript_id=HG00140_ch_T0001462;gene_id=HG00140_ch_G0000482;Parent=HG00140_ch_G0000482;transcript_name=HG00140_ch_T0001462;gene_name=TTTY6B;ID=HG00140_ch_T0001462;Name=TTTY6B
HG00140_chrY	CAT	exon	22330651	22330916	.	+	.	source_transcript=ENST00000774328.1;source_transcript_name=TTTY6B-203;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774328.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774328.1;transcript_id=HG00140_ch_T0001462;gene_id=HG00140_ch_G0000482;Parent=HG00140_ch_T0001462;transcript_name=HG00140_ch_T0001462;gene_name=TTTY6B;ID=exon:HG00140_ch_T0001462:0;Name=TTTY6B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22330917	22334538	.	+	.	source_transcript=ENST00000774328.1;source_transcript_name=TTTY6B-203;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774328.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774328.1;transcript_id=HG00140_ch_T0001462;gene_id=HG00140_ch_G0000482;Parent=HG00140_ch_T0001462;transcript_name=HG00140_ch_T0001462;gene_name=TTTY6B;ID=intron:HG00140_ch_T0001462:0;Name=TTTY6B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22334539	22334775	.	+	.	source_transcript=ENST00000774328.1;source_transcript_name=TTTY6B-203;source_gene=ENSG00000131548.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131548.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000774328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000774328.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=ENST00000774328.1;transcript_id=HG00140_ch_T0001462;gene_id=HG00140_ch_G0000482;Parent=HG00140_ch_T0001462;transcript_name=HG00140_ch_T0001462;gene_name=TTTY6B;ID=exon:HG00140_ch_T0001462:1;Name=TTTY6B;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	22356489	22370933	.	-	.	source_gene_common_name=RBMY1F;source_gene=ENSG00000169800.14;alternative_source_transcripts=ENST00000303766.12;gene_id=HG00140_ch_G0000483;gene_biotype=protein_coding;gene_name=RBMY1F;gene_sources=liftoff;ID=HG00140_ch_G0000483;Name=RBMY1F
HG00140_chrY	CAT	transcript	22356489	22370874	100	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00140_ch_T0001463;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_G0000483;transcript_name=HG00140_ch_T0001463;gene_name=RBMY1F;ID=HG00140_ch_T0001463;Name=RBMY1F
HG00140_chrY	CAT	exon	22356489	22357065	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00140_ch_T0001463;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001463;transcript_name=HG00140_ch_T0001463;gene_name=RBMY1F;ID=exon:HG00140_ch_T0001463:0;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22356767	22357065	.	-	2	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00140_ch_T0001463;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001463;transcript_name=HG00140_ch_T0001463;gene_name=RBMY1F;ID=CDS:HG00140_ch_T0001463:0;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	22356767	22356769	.	-	0	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00140_ch_T0001463;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001463;transcript_name=HG00140_ch_T0001463;gene_name=RBMY1F;ID=stop_codon:HG00140_ch_T0001463;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22357066	22357476	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00140_ch_T0001463;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001463;transcript_name=HG00140_ch_T0001463;gene_name=RBMY1F;ID=intron:HG00140_ch_T0001463:0;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22357477	22357565	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00140_ch_T0001463;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001463;transcript_name=HG00140_ch_T0001463;gene_name=RBMY1F;ID=exon:HG00140_ch_T0001463:1;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22357477	22357565	.	-	1	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00140_ch_T0001463;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001463;transcript_name=HG00140_ch_T0001463;gene_name=RBMY1F;ID=CDS:HG00140_ch_T0001463:1;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22357566	22357651	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00140_ch_T0001463;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001463;transcript_name=HG00140_ch_T0001463;gene_name=RBMY1F;ID=intron:HG00140_ch_T0001463:1;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22357652	22357762	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00140_ch_T0001463;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001463;transcript_name=HG00140_ch_T0001463;gene_name=RBMY1F;ID=exon:HG00140_ch_T0001463:2;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22357652	22357762	.	-	1	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00140_ch_T0001463;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001463;transcript_name=HG00140_ch_T0001463;gene_name=RBMY1F;ID=CDS:HG00140_ch_T0001463:2;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22357763	22358685	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00140_ch_T0001463;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001463;transcript_name=HG00140_ch_T0001463;gene_name=RBMY1F;ID=intron:HG00140_ch_T0001463:2;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22358686	22358796	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00140_ch_T0001463;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001463;transcript_name=HG00140_ch_T0001463;gene_name=RBMY1F;ID=exon:HG00140_ch_T0001463:3;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22358686	22358796	.	-	1	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00140_ch_T0001463;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001463;transcript_name=HG00140_ch_T0001463;gene_name=RBMY1F;ID=CDS:HG00140_ch_T0001463:3;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22358797	22359230	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00140_ch_T0001463;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001463;transcript_name=HG00140_ch_T0001463;gene_name=RBMY1F;ID=intron:HG00140_ch_T0001463:3;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22359231	22359341	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00140_ch_T0001463;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001463;transcript_name=HG00140_ch_T0001463;gene_name=RBMY1F;ID=exon:HG00140_ch_T0001463:4;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22359231	22359341	.	-	1	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00140_ch_T0001463;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001463;transcript_name=HG00140_ch_T0001463;gene_name=RBMY1F;ID=CDS:HG00140_ch_T0001463:4;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22359342	22359781	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00140_ch_T0001463;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001463;transcript_name=HG00140_ch_T0001463;gene_name=RBMY1F;ID=intron:HG00140_ch_T0001463:4;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22359782	22359892	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00140_ch_T0001463;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001463;transcript_name=HG00140_ch_T0001463;gene_name=RBMY1F;ID=exon:HG00140_ch_T0001463:5;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22359782	22359892	.	-	1	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00140_ch_T0001463;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001463;transcript_name=HG00140_ch_T0001463;gene_name=RBMY1F;ID=CDS:HG00140_ch_T0001463:5;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22359893	22360847	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00140_ch_T0001463;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001463;transcript_name=HG00140_ch_T0001463;gene_name=RBMY1F;ID=intron:HG00140_ch_T0001463:5;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22360848	22360962	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00140_ch_T0001463;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001463;transcript_name=HG00140_ch_T0001463;gene_name=RBMY1F;ID=exon:HG00140_ch_T0001463:6;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22360848	22360962	.	-	2	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00140_ch_T0001463;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001463;transcript_name=HG00140_ch_T0001463;gene_name=RBMY1F;ID=CDS:HG00140_ch_T0001463:6;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22360963	22362972	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00140_ch_T0001463;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001463;transcript_name=HG00140_ch_T0001463;gene_name=RBMY1F;ID=intron:HG00140_ch_T0001463:6;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22362973	22363125	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00140_ch_T0001463;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001463;transcript_name=HG00140_ch_T0001463;gene_name=RBMY1F;ID=exon:HG00140_ch_T0001463:7;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22362973	22363125	.	-	2	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00140_ch_T0001463;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001463;transcript_name=HG00140_ch_T0001463;gene_name=RBMY1F;ID=CDS:HG00140_ch_T0001463:7;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22363126	22365040	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00140_ch_T0001463;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001463;transcript_name=HG00140_ch_T0001463;gene_name=RBMY1F;ID=intron:HG00140_ch_T0001463:7;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22365041	22365218	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00140_ch_T0001463;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001463;transcript_name=HG00140_ch_T0001463;gene_name=RBMY1F;ID=exon:HG00140_ch_T0001463:8;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22365041	22365218	.	-	0	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00140_ch_T0001463;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001463;transcript_name=HG00140_ch_T0001463;gene_name=RBMY1F;ID=CDS:HG00140_ch_T0001463:8;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22365219	22368241	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00140_ch_T0001463;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001463;transcript_name=HG00140_ch_T0001463;gene_name=RBMY1F;ID=intron:HG00140_ch_T0001463:8;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22368242	22368345	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00140_ch_T0001463;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001463;transcript_name=HG00140_ch_T0001463;gene_name=RBMY1F;ID=exon:HG00140_ch_T0001463:9;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22368242	22368345	.	-	2	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00140_ch_T0001463;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001463;transcript_name=HG00140_ch_T0001463;gene_name=RBMY1F;ID=CDS:HG00140_ch_T0001463:9;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22368346	22368811	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00140_ch_T0001463;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001463;transcript_name=HG00140_ch_T0001463;gene_name=RBMY1F;ID=intron:HG00140_ch_T0001463:9;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22368812	22368924	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00140_ch_T0001463;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001463;transcript_name=HG00140_ch_T0001463;gene_name=RBMY1F;ID=exon:HG00140_ch_T0001463:10;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22368812	22368920	.	-	0	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00140_ch_T0001463;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001463;transcript_name=HG00140_ch_T0001463;gene_name=RBMY1F;ID=CDS:HG00140_ch_T0001463:10;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	22368918	22368920	.	-	0	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00140_ch_T0001463;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001463;transcript_name=HG00140_ch_T0001463;gene_name=RBMY1F;ID=start_codon:HG00140_ch_T0001463;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22368925	22370785	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00140_ch_T0001463;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001463;transcript_name=HG00140_ch_T0001463;gene_name=RBMY1F;ID=intron:HG00140_ch_T0001463:10;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22370786	22370874	.	-	.	source_transcript=ENST00000303766.12;source_transcript_name=RBMY1F-201;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000303766.12;alignment_mode=liftoff;normalized_transcript_id=ENST00000303766.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000303766.12;transcript_id=HG00140_ch_T0001463;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001463;transcript_name=HG00140_ch_T0001463;gene_name=RBMY1F;ID=exon:HG00140_ch_T0001463:11;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	22356489	22370933	100	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00140_ch_T0001464;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_G0000483;transcript_name=HG00140_ch_T0001464;gene_name=RBMY1F;ID=HG00140_ch_T0001464;Name=RBMY1F
HG00140_chrY	CAT	exon	22356489	22357065	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00140_ch_T0001464;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001464;transcript_name=HG00140_ch_T0001464;gene_name=RBMY1F;ID=exon:HG00140_ch_T0001464:0;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22356767	22357065	.	-	2	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00140_ch_T0001464;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001464;transcript_name=HG00140_ch_T0001464;gene_name=RBMY1F;ID=CDS:HG00140_ch_T0001464:0;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	22356767	22356769	.	-	0	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00140_ch_T0001464;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001464;transcript_name=HG00140_ch_T0001464;gene_name=RBMY1F;ID=stop_codon:HG00140_ch_T0001464;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22357066	22357476	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00140_ch_T0001464;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001464;transcript_name=HG00140_ch_T0001464;gene_name=RBMY1F;ID=intron:HG00140_ch_T0001464:0;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22357477	22357565	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00140_ch_T0001464;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001464;transcript_name=HG00140_ch_T0001464;gene_name=RBMY1F;ID=exon:HG00140_ch_T0001464:1;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22357477	22357565	.	-	1	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00140_ch_T0001464;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001464;transcript_name=HG00140_ch_T0001464;gene_name=RBMY1F;ID=CDS:HG00140_ch_T0001464:1;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22357566	22358685	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00140_ch_T0001464;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001464;transcript_name=HG00140_ch_T0001464;gene_name=RBMY1F;ID=intron:HG00140_ch_T0001464:1;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22358686	22358796	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00140_ch_T0001464;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001464;transcript_name=HG00140_ch_T0001464;gene_name=RBMY1F;ID=exon:HG00140_ch_T0001464:2;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22358686	22358796	.	-	1	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00140_ch_T0001464;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001464;transcript_name=HG00140_ch_T0001464;gene_name=RBMY1F;ID=CDS:HG00140_ch_T0001464:2;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22358797	22359230	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00140_ch_T0001464;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001464;transcript_name=HG00140_ch_T0001464;gene_name=RBMY1F;ID=intron:HG00140_ch_T0001464:2;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22359231	22359341	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00140_ch_T0001464;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001464;transcript_name=HG00140_ch_T0001464;gene_name=RBMY1F;ID=exon:HG00140_ch_T0001464:3;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22359231	22359341	.	-	1	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00140_ch_T0001464;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001464;transcript_name=HG00140_ch_T0001464;gene_name=RBMY1F;ID=CDS:HG00140_ch_T0001464:3;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22359342	22359781	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00140_ch_T0001464;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001464;transcript_name=HG00140_ch_T0001464;gene_name=RBMY1F;ID=intron:HG00140_ch_T0001464:3;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22359782	22359892	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00140_ch_T0001464;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001464;transcript_name=HG00140_ch_T0001464;gene_name=RBMY1F;ID=exon:HG00140_ch_T0001464:4;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22359782	22359892	.	-	1	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00140_ch_T0001464;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001464;transcript_name=HG00140_ch_T0001464;gene_name=RBMY1F;ID=CDS:HG00140_ch_T0001464:4;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22359893	22360847	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00140_ch_T0001464;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001464;transcript_name=HG00140_ch_T0001464;gene_name=RBMY1F;ID=intron:HG00140_ch_T0001464:4;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22360848	22360962	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00140_ch_T0001464;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001464;transcript_name=HG00140_ch_T0001464;gene_name=RBMY1F;ID=exon:HG00140_ch_T0001464:5;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22360848	22360962	.	-	2	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00140_ch_T0001464;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001464;transcript_name=HG00140_ch_T0001464;gene_name=RBMY1F;ID=CDS:HG00140_ch_T0001464:5;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22360963	22362972	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00140_ch_T0001464;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001464;transcript_name=HG00140_ch_T0001464;gene_name=RBMY1F;ID=intron:HG00140_ch_T0001464:5;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22362973	22363125	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00140_ch_T0001464;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001464;transcript_name=HG00140_ch_T0001464;gene_name=RBMY1F;ID=exon:HG00140_ch_T0001464:6;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22362973	22363125	.	-	2	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00140_ch_T0001464;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001464;transcript_name=HG00140_ch_T0001464;gene_name=RBMY1F;ID=CDS:HG00140_ch_T0001464:6;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22363126	22365040	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00140_ch_T0001464;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001464;transcript_name=HG00140_ch_T0001464;gene_name=RBMY1F;ID=intron:HG00140_ch_T0001464:6;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22365041	22365218	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00140_ch_T0001464;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001464;transcript_name=HG00140_ch_T0001464;gene_name=RBMY1F;ID=exon:HG00140_ch_T0001464:7;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22365041	22365218	.	-	0	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00140_ch_T0001464;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001464;transcript_name=HG00140_ch_T0001464;gene_name=RBMY1F;ID=CDS:HG00140_ch_T0001464:7;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22365219	22368241	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00140_ch_T0001464;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001464;transcript_name=HG00140_ch_T0001464;gene_name=RBMY1F;ID=intron:HG00140_ch_T0001464:7;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22368242	22368345	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00140_ch_T0001464;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001464;transcript_name=HG00140_ch_T0001464;gene_name=RBMY1F;ID=exon:HG00140_ch_T0001464:8;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22368242	22368345	.	-	2	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00140_ch_T0001464;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001464;transcript_name=HG00140_ch_T0001464;gene_name=RBMY1F;ID=CDS:HG00140_ch_T0001464:8;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22368346	22368811	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00140_ch_T0001464;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001464;transcript_name=HG00140_ch_T0001464;gene_name=RBMY1F;ID=intron:HG00140_ch_T0001464:8;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22368812	22368924	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00140_ch_T0001464;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001464;transcript_name=HG00140_ch_T0001464;gene_name=RBMY1F;ID=exon:HG00140_ch_T0001464:9;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22368812	22368920	.	-	0	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00140_ch_T0001464;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001464;transcript_name=HG00140_ch_T0001464;gene_name=RBMY1F;ID=CDS:HG00140_ch_T0001464:9;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	22368918	22368920	.	-	0	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00140_ch_T0001464;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001464;transcript_name=HG00140_ch_T0001464;gene_name=RBMY1F;ID=start_codon:HG00140_ch_T0001464;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22368925	22370785	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00140_ch_T0001464;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001464;transcript_name=HG00140_ch_T0001464;gene_name=RBMY1F;ID=intron:HG00140_ch_T0001464:9;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22370786	22370933	.	-	.	source_transcript=ENST00000454978.2;source_transcript_name=RBMY1F-202;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000454978.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000454978.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000454978.2;transcript_id=HG00140_ch_T0001464;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001464;transcript_name=HG00140_ch_T0001464;gene_name=RBMY1F;ID=exon:HG00140_ch_T0001464:10;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	22356489	22370908	1000	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG00140_ch_T0001465;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_G0000483;transcript_name=HG00140_ch_T0001465;gene_name=RBMY1F;ID=HG00140_ch_T0001465;Name=RBMY1F
HG00140_chrY	CAT	exon	22356489	22357065	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG00140_ch_T0001465;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001465;transcript_name=HG00140_ch_T0001465;gene_name=RBMY1F;ID=exon:HG00140_ch_T0001465:0;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22357066	22357476	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG00140_ch_T0001465;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001465;transcript_name=HG00140_ch_T0001465;gene_name=RBMY1F;ID=intron:HG00140_ch_T0001465:0;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22357477	22357565	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG00140_ch_T0001465;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001465;transcript_name=HG00140_ch_T0001465;gene_name=RBMY1F;ID=exon:HG00140_ch_T0001465:1;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22357566	22357651	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG00140_ch_T0001465;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001465;transcript_name=HG00140_ch_T0001465;gene_name=RBMY1F;ID=intron:HG00140_ch_T0001465:1;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22357652	22357762	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG00140_ch_T0001465;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001465;transcript_name=HG00140_ch_T0001465;gene_name=RBMY1F;ID=exon:HG00140_ch_T0001465:2;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22357763	22358685	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG00140_ch_T0001465;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001465;transcript_name=HG00140_ch_T0001465;gene_name=RBMY1F;ID=intron:HG00140_ch_T0001465:2;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22358686	22358796	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG00140_ch_T0001465;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001465;transcript_name=HG00140_ch_T0001465;gene_name=RBMY1F;ID=exon:HG00140_ch_T0001465:3;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22358797	22359230	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG00140_ch_T0001465;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001465;transcript_name=HG00140_ch_T0001465;gene_name=RBMY1F;ID=intron:HG00140_ch_T0001465:3;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22359231	22359341	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG00140_ch_T0001465;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001465;transcript_name=HG00140_ch_T0001465;gene_name=RBMY1F;ID=exon:HG00140_ch_T0001465:4;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22359342	22359781	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG00140_ch_T0001465;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001465;transcript_name=HG00140_ch_T0001465;gene_name=RBMY1F;ID=intron:HG00140_ch_T0001465:4;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22359782	22359892	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG00140_ch_T0001465;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001465;transcript_name=HG00140_ch_T0001465;gene_name=RBMY1F;ID=exon:HG00140_ch_T0001465:5;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22359893	22360847	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG00140_ch_T0001465;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001465;transcript_name=HG00140_ch_T0001465;gene_name=RBMY1F;ID=intron:HG00140_ch_T0001465:5;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22360848	22360962	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG00140_ch_T0001465;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001465;transcript_name=HG00140_ch_T0001465;gene_name=RBMY1F;ID=exon:HG00140_ch_T0001465:6;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22360963	22362972	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG00140_ch_T0001465;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001465;transcript_name=HG00140_ch_T0001465;gene_name=RBMY1F;ID=intron:HG00140_ch_T0001465:6;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22362973	22363125	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG00140_ch_T0001465;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001465;transcript_name=HG00140_ch_T0001465;gene_name=RBMY1F;ID=exon:HG00140_ch_T0001465:7;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22363126	22368241	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG00140_ch_T0001465;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001465;transcript_name=HG00140_ch_T0001465;gene_name=RBMY1F;ID=intron:HG00140_ch_T0001465:7;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22368242	22368345	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG00140_ch_T0001465;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001465;transcript_name=HG00140_ch_T0001465;gene_name=RBMY1F;ID=exon:HG00140_ch_T0001465:8;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22368346	22368811	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG00140_ch_T0001465;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001465;transcript_name=HG00140_ch_T0001465;gene_name=RBMY1F;ID=intron:HG00140_ch_T0001465:8;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22368812	22368924	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG00140_ch_T0001465;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001465;transcript_name=HG00140_ch_T0001465;gene_name=RBMY1F;ID=exon:HG00140_ch_T0001465:9;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22368925	22370785	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG00140_ch_T0001465;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001465;transcript_name=HG00140_ch_T0001465;gene_name=RBMY1F;ID=intron:HG00140_ch_T0001465:9;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22370786	22370908	.	-	.	source_transcript=ENST00000481858.1;source_transcript_name=RBMY1F-203;source_gene=ENSG00000169800.14;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169800.14;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000481858.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000481858.1;transcript_score=299.942;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=ENST00000481858.1,ENST00000470460.1;transcript_id=HG00140_ch_T0001465;gene_id=HG00140_ch_G0000483;Parent=HG00140_ch_T0001465;transcript_name=HG00140_ch_T0001465;gene_name=RBMY1F;ID=exon:HG00140_ch_T0001465:10;Name=RBMY1F;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	22371801	22373972	.	+	.	source_gene_common_name=TSPY23P;source_gene=ENSG00000229159.1;alternative_source_transcripts=ENST00000440136.1;gene_id=HG00140_ch_G0000484;gene_biotype=unprocessed_pseudogene;gene_name=TSPY23P;gene_sources=liftoff;ID=HG00140_ch_G0000484;Name=TSPY23P
HG00140_chrY	CAT	transcript	22371801	22373972	1000	+	.	source_transcript=ENST00000440136.1;source_transcript_name=TSPY23P-201;source_gene=ENSG00000229159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440136.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY23P;alternative_source_transcripts=ENST00000440136.1;transcript_id=HG00140_ch_T0001466;gene_id=HG00140_ch_G0000484;Parent=HG00140_ch_G0000484;transcript_name=HG00140_ch_T0001466;gene_name=TSPY23P;ID=HG00140_ch_T0001466;Name=TSPY23P
HG00140_chrY	CAT	exon	22371801	22372194	.	+	.	source_transcript=ENST00000440136.1;source_transcript_name=TSPY23P-201;source_gene=ENSG00000229159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY23P;alternative_source_transcripts=ENST00000440136.1;transcript_id=HG00140_ch_T0001466;gene_id=HG00140_ch_G0000484;Parent=HG00140_ch_T0001466;transcript_name=HG00140_ch_T0001466;gene_name=TSPY23P;ID=exon:HG00140_ch_T0001466:0;Name=TSPY23P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22372195	22373185	.	+	.	source_transcript=ENST00000440136.1;source_transcript_name=TSPY23P-201;source_gene=ENSG00000229159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY23P;alternative_source_transcripts=ENST00000440136.1;transcript_id=HG00140_ch_T0001466;gene_id=HG00140_ch_G0000484;Parent=HG00140_ch_T0001466;transcript_name=HG00140_ch_T0001466;gene_name=TSPY23P;ID=intron:HG00140_ch_T0001466:0;Name=TSPY23P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22373186	22373267	.	+	.	source_transcript=ENST00000440136.1;source_transcript_name=TSPY23P-201;source_gene=ENSG00000229159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY23P;alternative_source_transcripts=ENST00000440136.1;transcript_id=HG00140_ch_T0001466;gene_id=HG00140_ch_G0000484;Parent=HG00140_ch_T0001466;transcript_name=HG00140_ch_T0001466;gene_name=TSPY23P;ID=exon:HG00140_ch_T0001466:1;Name=TSPY23P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22373268	22373505	.	+	.	source_transcript=ENST00000440136.1;source_transcript_name=TSPY23P-201;source_gene=ENSG00000229159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY23P;alternative_source_transcripts=ENST00000440136.1;transcript_id=HG00140_ch_T0001466;gene_id=HG00140_ch_G0000484;Parent=HG00140_ch_T0001466;transcript_name=HG00140_ch_T0001466;gene_name=TSPY23P;ID=intron:HG00140_ch_T0001466:1;Name=TSPY23P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22373506	22373576	.	+	.	source_transcript=ENST00000440136.1;source_transcript_name=TSPY23P-201;source_gene=ENSG00000229159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY23P;alternative_source_transcripts=ENST00000440136.1;transcript_id=HG00140_ch_T0001466;gene_id=HG00140_ch_G0000484;Parent=HG00140_ch_T0001466;transcript_name=HG00140_ch_T0001466;gene_name=TSPY23P;ID=exon:HG00140_ch_T0001466:2;Name=TSPY23P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22373577	22373663	.	+	.	source_transcript=ENST00000440136.1;source_transcript_name=TSPY23P-201;source_gene=ENSG00000229159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY23P;alternative_source_transcripts=ENST00000440136.1;transcript_id=HG00140_ch_T0001466;gene_id=HG00140_ch_G0000484;Parent=HG00140_ch_T0001466;transcript_name=HG00140_ch_T0001466;gene_name=TSPY23P;ID=intron:HG00140_ch_T0001466:2;Name=TSPY23P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22373664	22373807	.	+	.	source_transcript=ENST00000440136.1;source_transcript_name=TSPY23P-201;source_gene=ENSG00000229159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY23P;alternative_source_transcripts=ENST00000440136.1;transcript_id=HG00140_ch_T0001466;gene_id=HG00140_ch_G0000484;Parent=HG00140_ch_T0001466;transcript_name=HG00140_ch_T0001466;gene_name=TSPY23P;ID=exon:HG00140_ch_T0001466:3;Name=TSPY23P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22373808	22373924	.	+	.	source_transcript=ENST00000440136.1;source_transcript_name=TSPY23P-201;source_gene=ENSG00000229159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY23P;alternative_source_transcripts=ENST00000440136.1;transcript_id=HG00140_ch_T0001466;gene_id=HG00140_ch_G0000484;Parent=HG00140_ch_T0001466;transcript_name=HG00140_ch_T0001466;gene_name=TSPY23P;ID=intron:HG00140_ch_T0001466:3;Name=TSPY23P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22373925	22373972	.	+	.	source_transcript=ENST00000440136.1;source_transcript_name=TSPY23P-201;source_gene=ENSG00000229159.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229159.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440136.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440136.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY23P;alternative_source_transcripts=ENST00000440136.1;transcript_id=HG00140_ch_T0001466;gene_id=HG00140_ch_G0000484;Parent=HG00140_ch_T0001466;transcript_name=HG00140_ch_T0001466;gene_name=TSPY23P;ID=exon:HG00140_ch_T0001466:4;Name=TSPY23P;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	22386380	22391663	.	+	.	source_gene_common_name=RBMY2UP;source_gene=ENSG00000225615.1;alternative_source_transcripts=ENST00000453474.1;gene_id=HG00140_ch_G0000485;gene_biotype=unprocessed_pseudogene;gene_name=RBMY2UP;gene_sources=liftoff;ID=HG00140_ch_G0000485;Name=RBMY2UP
HG00140_chrY	CAT	transcript	22386380	22391663	1000	+	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1;transcript_id=HG00140_ch_T0001467;gene_id=HG00140_ch_G0000485;Parent=HG00140_ch_G0000485;transcript_name=HG00140_ch_T0001467;gene_name=RBMY2UP;ID=HG00140_ch_T0001467;Name=RBMY2UP
HG00140_chrY	CAT	exon	22386380	22386487	.	+	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1;transcript_id=HG00140_ch_T0001467;gene_id=HG00140_ch_G0000485;Parent=HG00140_ch_T0001467;transcript_name=HG00140_ch_T0001467;gene_name=RBMY2UP;ID=exon:HG00140_ch_T0001467:0;Name=RBMY2UP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22386488	22386890	.	+	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1;transcript_id=HG00140_ch_T0001467;gene_id=HG00140_ch_G0000485;Parent=HG00140_ch_T0001467;transcript_name=HG00140_ch_T0001467;gene_name=RBMY2UP;ID=intron:HG00140_ch_T0001467:0;Name=RBMY2UP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22386891	22386993	.	+	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1;transcript_id=HG00140_ch_T0001467;gene_id=HG00140_ch_G0000485;Parent=HG00140_ch_T0001467;transcript_name=HG00140_ch_T0001467;gene_name=RBMY2UP;ID=exon:HG00140_ch_T0001467:1;Name=RBMY2UP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22386994	22391550	.	+	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1;transcript_id=HG00140_ch_T0001467;gene_id=HG00140_ch_G0000485;Parent=HG00140_ch_T0001467;transcript_name=HG00140_ch_T0001467;gene_name=RBMY2UP;ID=intron:HG00140_ch_T0001467:1;Name=RBMY2UP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22391551	22391663	.	+	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1;transcript_id=HG00140_ch_T0001467;gene_id=HG00140_ch_G0000485;Parent=HG00140_ch_T0001467;transcript_name=HG00140_ch_T0001467;gene_name=RBMY2UP;ID=exon:HG00140_ch_T0001467:2;Name=RBMY2UP;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	22441872	22443920	.	-	.	source_gene_common_name=TTTY25P;source_gene=ENSG00000259247.1;alternative_source_transcripts=ENST00000558356.1;gene_id=HG00140_ch_G0000486;gene_biotype=unprocessed_pseudogene;gene_name=TTTY25P;gene_sources=liftoff;ID=HG00140_ch_G0000486;Name=TTTY25P
HG00140_chrY	CAT	transcript	22441872	22443920	1000	-	.	source_transcript=ENST00000558356.1;source_transcript_name=TTTY25P-201;source_gene=ENSG00000259247.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000259247.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000558356.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000558356.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY25P;alternative_source_transcripts=ENST00000558356.1;transcript_id=HG00140_ch_T0001468;gene_id=HG00140_ch_G0000486;Parent=HG00140_ch_G0000486;transcript_name=HG00140_ch_T0001468;gene_name=TTTY25P;ID=HG00140_ch_T0001468;Name=TTTY25P
HG00140_chrY	CAT	exon	22441872	22442803	.	-	.	source_transcript=ENST00000558356.1;source_transcript_name=TTTY25P-201;source_gene=ENSG00000259247.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000259247.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000558356.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000558356.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY25P;alternative_source_transcripts=ENST00000558356.1;transcript_id=HG00140_ch_T0001468;gene_id=HG00140_ch_G0000486;Parent=HG00140_ch_T0001468;transcript_name=HG00140_ch_T0001468;gene_name=TTTY25P;ID=exon:HG00140_ch_T0001468:0;Name=TTTY25P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22442804	22443347	.	-	.	source_transcript=ENST00000558356.1;source_transcript_name=TTTY25P-201;source_gene=ENSG00000259247.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000259247.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000558356.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000558356.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY25P;alternative_source_transcripts=ENST00000558356.1;transcript_id=HG00140_ch_T0001468;gene_id=HG00140_ch_G0000486;Parent=HG00140_ch_T0001468;transcript_name=HG00140_ch_T0001468;gene_name=TTTY25P;ID=intron:HG00140_ch_T0001468:0;Name=TTTY25P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22443348	22443920	.	-	.	source_transcript=ENST00000558356.1;source_transcript_name=TTTY25P-201;source_gene=ENSG00000259247.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000259247.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000558356.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000558356.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY25P;alternative_source_transcripts=ENST00000558356.1;transcript_id=HG00140_ch_T0001468;gene_id=HG00140_ch_G0000486;Parent=HG00140_ch_T0001468;transcript_name=HG00140_ch_T0001468;gene_name=TTTY25P;ID=exon:HG00140_ch_T0001468:1;Name=TTTY25P;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	22452549	22463510	.	-	.	source_gene_common_name=RBMY2FP;source_gene=ENSG00000243040.7;gene_id=HG00140_ch_G0000487;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY2FP;gene_sources=liftoff;ID=HG00140_ch_G0000487;Name=RBMY2FP
HG00140_chrY	CAT	transcript	22452549	22463510	1000	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00140_ch_T0001469;gene_id=HG00140_ch_G0000487;Parent=HG00140_ch_G0000487;transcript_name=HG00140_ch_T0001469;gene_name=RBMY2FP;ID=HG00140_ch_T0001469;Name=RBMY2FP
HG00140_chrY	CAT	exon	22452549	22452850	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00140_ch_T0001469;gene_id=HG00140_ch_G0000487;Parent=HG00140_ch_T0001469;transcript_name=HG00140_ch_T0001469;gene_name=RBMY2FP;ID=exon:HG00140_ch_T0001469:0;Name=RBMY2FP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22452851	22453264	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00140_ch_T0001469;gene_id=HG00140_ch_G0000487;Parent=HG00140_ch_T0001469;transcript_name=HG00140_ch_T0001469;gene_name=RBMY2FP;ID=intron:HG00140_ch_T0001469:0;Name=RBMY2FP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22453265	22453353	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00140_ch_T0001469;gene_id=HG00140_ch_G0000487;Parent=HG00140_ch_T0001469;transcript_name=HG00140_ch_T0001469;gene_name=RBMY2FP;ID=exon:HG00140_ch_T0001469:1;Name=RBMY2FP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22453354	22453433	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00140_ch_T0001469;gene_id=HG00140_ch_G0000487;Parent=HG00140_ch_T0001469;transcript_name=HG00140_ch_T0001469;gene_name=RBMY2FP;ID=intron:HG00140_ch_T0001469:1;Name=RBMY2FP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22453434	22453544	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00140_ch_T0001469;gene_id=HG00140_ch_G0000487;Parent=HG00140_ch_T0001469;transcript_name=HG00140_ch_T0001469;gene_name=RBMY2FP;ID=exon:HG00140_ch_T0001469:2;Name=RBMY2FP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22453545	22453909	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00140_ch_T0001469;gene_id=HG00140_ch_G0000487;Parent=HG00140_ch_T0001469;transcript_name=HG00140_ch_T0001469;gene_name=RBMY2FP;ID=intron:HG00140_ch_T0001469:2;Name=RBMY2FP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22453910	22454011	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00140_ch_T0001469;gene_id=HG00140_ch_G0000487;Parent=HG00140_ch_T0001469;transcript_name=HG00140_ch_T0001469;gene_name=RBMY2FP;ID=exon:HG00140_ch_T0001469:3;Name=RBMY2FP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22454012	22455476	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00140_ch_T0001469;gene_id=HG00140_ch_G0000487;Parent=HG00140_ch_T0001469;transcript_name=HG00140_ch_T0001469;gene_name=RBMY2FP;ID=intron:HG00140_ch_T0001469:3;Name=RBMY2FP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22455477	22455591	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00140_ch_T0001469;gene_id=HG00140_ch_G0000487;Parent=HG00140_ch_T0001469;transcript_name=HG00140_ch_T0001469;gene_name=RBMY2FP;ID=exon:HG00140_ch_T0001469:4;Name=RBMY2FP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22455592	22457626	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00140_ch_T0001469;gene_id=HG00140_ch_G0000487;Parent=HG00140_ch_T0001469;transcript_name=HG00140_ch_T0001469;gene_name=RBMY2FP;ID=intron:HG00140_ch_T0001469:4;Name=RBMY2FP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22457627	22457779	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00140_ch_T0001469;gene_id=HG00140_ch_G0000487;Parent=HG00140_ch_T0001469;transcript_name=HG00140_ch_T0001469;gene_name=RBMY2FP;ID=exon:HG00140_ch_T0001469:5;Name=RBMY2FP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22457780	22459703	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00140_ch_T0001469;gene_id=HG00140_ch_G0000487;Parent=HG00140_ch_T0001469;transcript_name=HG00140_ch_T0001469;gene_name=RBMY2FP;ID=intron:HG00140_ch_T0001469:5;Name=RBMY2FP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22459704	22459881	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00140_ch_T0001469;gene_id=HG00140_ch_G0000487;Parent=HG00140_ch_T0001469;transcript_name=HG00140_ch_T0001469;gene_name=RBMY2FP;ID=exon:HG00140_ch_T0001469:6;Name=RBMY2FP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22459882	22462875	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00140_ch_T0001469;gene_id=HG00140_ch_G0000487;Parent=HG00140_ch_T0001469;transcript_name=HG00140_ch_T0001469;gene_name=RBMY2FP;ID=intron:HG00140_ch_T0001469:6;Name=RBMY2FP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22462876	22462979	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00140_ch_T0001469;gene_id=HG00140_ch_G0000487;Parent=HG00140_ch_T0001469;transcript_name=HG00140_ch_T0001469;gene_name=RBMY2FP;ID=exon:HG00140_ch_T0001469:7;Name=RBMY2FP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22462980	22463401	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00140_ch_T0001469;gene_id=HG00140_ch_G0000487;Parent=HG00140_ch_T0001469;transcript_name=HG00140_ch_T0001469;gene_name=RBMY2FP;ID=intron:HG00140_ch_T0001469:7;Name=RBMY2FP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22463402	22463510	.	-	.	source_transcript=ENST00000420346.1;source_transcript_name=RBMY2FP-201;source_gene=ENSG00000243040.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000243040.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000420346.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00140_ch_T0001469;gene_id=HG00140_ch_G0000487;Parent=HG00140_ch_T0001469;transcript_name=HG00140_ch_T0001469;gene_name=RBMY2FP;ID=exon:HG00140_ch_T0001469:8;Name=RBMY2FP;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	22458169	22465525	.	-	.	source_gene_common_name=RBMY2FP;source_gene=ENSG00000290336.2;gene_id=HG00140_ch_G0000488;gene_biotype=lncRNA;gene_name=RBMY2FP;gene_sources=liftoff;ID=HG00140_ch_G0000488;Name=RBMY2FP
HG00140_chrY	CAT	transcript	22458169	22465525	1000	-	.	source_transcript=ENST00000303922.8;source_transcript_name=RBMY2FP-202;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303922.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000303922.8;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00140_ch_T0001470;gene_id=HG00140_ch_G0000488;Parent=HG00140_ch_G0000488;transcript_name=HG00140_ch_T0001470;gene_name=RBMY2FP;ID=HG00140_ch_T0001470;Name=RBMY2FP
HG00140_chrY	CAT	exon	22458169	22459881	.	-	.	source_transcript=ENST00000303922.8;source_transcript_name=RBMY2FP-202;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303922.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000303922.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00140_ch_T0001470;gene_id=HG00140_ch_G0000488;Parent=HG00140_ch_T0001470;transcript_name=HG00140_ch_T0001470;gene_name=RBMY2FP;ID=exon:HG00140_ch_T0001470:0;Name=RBMY2FP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22459882	22462875	.	-	.	source_transcript=ENST00000303922.8;source_transcript_name=RBMY2FP-202;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303922.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000303922.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00140_ch_T0001470;gene_id=HG00140_ch_G0000488;Parent=HG00140_ch_T0001470;transcript_name=HG00140_ch_T0001470;gene_name=RBMY2FP;ID=intron:HG00140_ch_T0001470:0;Name=RBMY2FP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22462876	22462979	.	-	.	source_transcript=ENST00000303922.8;source_transcript_name=RBMY2FP-202;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303922.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000303922.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00140_ch_T0001470;gene_id=HG00140_ch_G0000488;Parent=HG00140_ch_T0001470;transcript_name=HG00140_ch_T0001470;gene_name=RBMY2FP;ID=exon:HG00140_ch_T0001470:1;Name=RBMY2FP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22462980	22463401	.	-	.	source_transcript=ENST00000303922.8;source_transcript_name=RBMY2FP-202;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303922.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000303922.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00140_ch_T0001470;gene_id=HG00140_ch_G0000488;Parent=HG00140_ch_T0001470;transcript_name=HG00140_ch_T0001470;gene_name=RBMY2FP;ID=intron:HG00140_ch_T0001470:1;Name=RBMY2FP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22463402	22463514	.	-	.	source_transcript=ENST00000303922.8;source_transcript_name=RBMY2FP-202;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303922.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000303922.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00140_ch_T0001470;gene_id=HG00140_ch_G0000488;Parent=HG00140_ch_T0001470;transcript_name=HG00140_ch_T0001470;gene_name=RBMY2FP;ID=exon:HG00140_ch_T0001470:2;Name=RBMY2FP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22463515	22465383	.	-	.	source_transcript=ENST00000303922.8;source_transcript_name=RBMY2FP-202;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303922.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000303922.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00140_ch_T0001470;gene_id=HG00140_ch_G0000488;Parent=HG00140_ch_T0001470;transcript_name=HG00140_ch_T0001470;gene_name=RBMY2FP;ID=intron:HG00140_ch_T0001470:2;Name=RBMY2FP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22465384	22465525	.	-	.	source_transcript=ENST00000303922.8;source_transcript_name=RBMY2FP-202;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303922.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000303922.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00140_ch_T0001470;gene_id=HG00140_ch_G0000488;Parent=HG00140_ch_T0001470;transcript_name=HG00140_ch_T0001470;gene_name=RBMY2FP;ID=exon:HG00140_ch_T0001470:3;Name=RBMY2FP;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	22463263	22465470	1000	-	.	source_transcript=ENST00000724365.1;source_transcript_name=RBMY2FP-203;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000724365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000724365.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00140_ch_T0001471;gene_id=HG00140_ch_G0000488;Parent=HG00140_ch_G0000488;transcript_name=HG00140_ch_T0001471;gene_name=RBMY2FP;ID=HG00140_ch_T0001471;Name=RBMY2FP
HG00140_chrY	CAT	exon	22463263	22463514	.	-	.	source_transcript=ENST00000724365.1;source_transcript_name=RBMY2FP-203;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000724365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000724365.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00140_ch_T0001471;gene_id=HG00140_ch_G0000488;Parent=HG00140_ch_T0001471;transcript_name=HG00140_ch_T0001471;gene_name=RBMY2FP;ID=exon:HG00140_ch_T0001471:0;Name=RBMY2FP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22463515	22464643	.	-	.	source_transcript=ENST00000724365.1;source_transcript_name=RBMY2FP-203;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000724365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000724365.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00140_ch_T0001471;gene_id=HG00140_ch_G0000488;Parent=HG00140_ch_T0001471;transcript_name=HG00140_ch_T0001471;gene_name=RBMY2FP;ID=intron:HG00140_ch_T0001471:0;Name=RBMY2FP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22464644	22464730	.	-	.	source_transcript=ENST00000724365.1;source_transcript_name=RBMY2FP-203;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000724365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000724365.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00140_ch_T0001471;gene_id=HG00140_ch_G0000488;Parent=HG00140_ch_T0001471;transcript_name=HG00140_ch_T0001471;gene_name=RBMY2FP;ID=exon:HG00140_ch_T0001471:1;Name=RBMY2FP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22464731	22465383	.	-	.	source_transcript=ENST00000724365.1;source_transcript_name=RBMY2FP-203;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000724365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000724365.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00140_ch_T0001471;gene_id=HG00140_ch_G0000488;Parent=HG00140_ch_T0001471;transcript_name=HG00140_ch_T0001471;gene_name=RBMY2FP;ID=intron:HG00140_ch_T0001471:1;Name=RBMY2FP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22465384	22465470	.	-	.	source_transcript=ENST00000724365.1;source_transcript_name=RBMY2FP-203;source_gene=ENSG00000290336.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290336.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000724365.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000724365.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;transcript_id=HG00140_ch_T0001471;gene_id=HG00140_ch_G0000488;Parent=HG00140_ch_T0001471;transcript_name=HG00140_ch_T0001471;gene_name=RBMY2FP;ID=exon:HG00140_ch_T0001471:2;Name=RBMY2FP;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	22466403	22468429	.	+	.	source_gene_common_name=TSPY22P;source_gene=ENSG00000229940.1;alternative_source_transcripts=ENST00000427496.1;gene_id=HG00140_ch_G0000489;gene_biotype=unprocessed_pseudogene;gene_name=TSPY22P;gene_sources=liftoff;ID=HG00140_ch_G0000489;Name=TSPY22P
HG00140_chrY	CAT	transcript	22466403	22468429	1000	+	.	source_transcript=ENST00000427496.1;source_transcript_name=TSPY22P-201;source_gene=ENSG00000229940.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229940.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427496.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427496.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY22P;alternative_source_transcripts=ENST00000427496.1;transcript_id=HG00140_ch_T0001472;gene_id=HG00140_ch_G0000489;Parent=HG00140_ch_G0000489;transcript_name=HG00140_ch_T0001472;gene_name=TSPY22P;ID=HG00140_ch_T0001472;Name=TSPY22P
HG00140_chrY	CAT	exon	22466403	22466794	.	+	.	source_transcript=ENST00000427496.1;source_transcript_name=TSPY22P-201;source_gene=ENSG00000229940.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229940.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427496.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427496.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY22P;alternative_source_transcripts=ENST00000427496.1;transcript_id=HG00140_ch_T0001472;gene_id=HG00140_ch_G0000489;Parent=HG00140_ch_T0001472;transcript_name=HG00140_ch_T0001472;gene_name=TSPY22P;ID=exon:HG00140_ch_T0001472:0;Name=TSPY22P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22466795	22468133	.	+	.	source_transcript=ENST00000427496.1;source_transcript_name=TSPY22P-201;source_gene=ENSG00000229940.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229940.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427496.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427496.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY22P;alternative_source_transcripts=ENST00000427496.1;transcript_id=HG00140_ch_T0001472;gene_id=HG00140_ch_G0000489;Parent=HG00140_ch_T0001472;transcript_name=HG00140_ch_T0001472;gene_name=TSPY22P;ID=intron:HG00140_ch_T0001472:0;Name=TSPY22P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22468134	22468199	.	+	.	source_transcript=ENST00000427496.1;source_transcript_name=TSPY22P-201;source_gene=ENSG00000229940.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229940.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427496.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427496.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY22P;alternative_source_transcripts=ENST00000427496.1;transcript_id=HG00140_ch_T0001472;gene_id=HG00140_ch_G0000489;Parent=HG00140_ch_T0001472;transcript_name=HG00140_ch_T0001472;gene_name=TSPY22P;ID=exon:HG00140_ch_T0001472:1;Name=TSPY22P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22468200	22468283	.	+	.	source_transcript=ENST00000427496.1;source_transcript_name=TSPY22P-201;source_gene=ENSG00000229940.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229940.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427496.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427496.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY22P;alternative_source_transcripts=ENST00000427496.1;transcript_id=HG00140_ch_T0001472;gene_id=HG00140_ch_G0000489;Parent=HG00140_ch_T0001472;transcript_name=HG00140_ch_T0001472;gene_name=TSPY22P;ID=intron:HG00140_ch_T0001472:1;Name=TSPY22P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22468284	22468429	.	+	.	source_transcript=ENST00000427496.1;source_transcript_name=TSPY22P-201;source_gene=ENSG00000229940.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229940.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427496.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427496.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY22P;alternative_source_transcripts=ENST00000427496.1;transcript_id=HG00140_ch_T0001472;gene_id=HG00140_ch_G0000489;Parent=HG00140_ch_T0001472;transcript_name=HG00140_ch_T0001472;gene_name=TSPY22P;ID=exon:HG00140_ch_T0001472:2;Name=TSPY22P;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	22475482	22477560	.	+	.	source_gene_common_name=TTTY5;source_gene=ENSG00000215560.2;alternative_source_transcripts=ENST00000400581.2;gene_id=HG00140_ch_G0000490;gene_biotype=lncRNA;gene_name=TTTY5;gene_sources=liftoff;ID=HG00140_ch_G0000490;Name=TTTY5
HG00140_chrY	CAT	transcript	22475482	22477560	1000	+	.	source_transcript=ENST00000400581.2;source_transcript_name=TTTY5-201;source_gene=ENSG00000215560.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000215560.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400581.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000400581.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=ENST00000400581.2;transcript_id=HG00140_ch_T0001473;gene_id=HG00140_ch_G0000490;Parent=HG00140_ch_G0000490;transcript_name=HG00140_ch_T0001473;gene_name=TTTY5;ID=HG00140_ch_T0001473;Name=TTTY5
HG00140_chrY	CAT	exon	22475482	22476052	.	+	.	source_transcript=ENST00000400581.2;source_transcript_name=TTTY5-201;source_gene=ENSG00000215560.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000215560.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400581.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000400581.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=ENST00000400581.2;transcript_id=HG00140_ch_T0001473;gene_id=HG00140_ch_G0000490;Parent=HG00140_ch_T0001473;transcript_name=HG00140_ch_T0001473;gene_name=TTTY5;ID=exon:HG00140_ch_T0001473:0;Name=TTTY5;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22476053	22476569	.	+	.	source_transcript=ENST00000400581.2;source_transcript_name=TTTY5-201;source_gene=ENSG00000215560.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000215560.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400581.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000400581.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=ENST00000400581.2;transcript_id=HG00140_ch_T0001473;gene_id=HG00140_ch_G0000490;Parent=HG00140_ch_T0001473;transcript_name=HG00140_ch_T0001473;gene_name=TTTY5;ID=intron:HG00140_ch_T0001473:0;Name=TTTY5;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22476570	22477560	.	+	.	source_transcript=ENST00000400581.2;source_transcript_name=TTTY5-201;source_gene=ENSG00000215560.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000215560.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400581.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000400581.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=ENST00000400581.2;transcript_id=HG00140_ch_T0001473;gene_id=HG00140_ch_G0000490;Parent=HG00140_ch_T0001473;transcript_name=HG00140_ch_T0001473;gene_name=TTTY5;ID=exon:HG00140_ch_T0001473:1;Name=TTTY5;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	22557897	22565146	.	-	.	source_gene_common_name=RBMY1KP;source_gene=ENSG00000229234.1;alternative_source_transcripts=ENST00000423480.1;gene_id=HG00140_ch_G0000491;gene_biotype=unprocessed_pseudogene;gene_name=RBMY1KP;gene_sources=liftoff;ID=HG00140_ch_G0000491;Name=RBMY1KP
HG00140_chrY	CAT	transcript	22557897	22565146	1000	-	.	source_transcript=ENST00000423480.1;source_transcript_name=RBMY1KP-201;source_gene=ENSG00000229234.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229234.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423480.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423480.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1KP;alternative_source_transcripts=ENST00000423480.1;transcript_id=HG00140_ch_T0001474;gene_id=HG00140_ch_G0000491;Parent=HG00140_ch_G0000491;transcript_name=HG00140_ch_T0001474;gene_name=RBMY1KP;ID=HG00140_ch_T0001474;Name=RBMY1KP
HG00140_chrY	CAT	exon	22557897	22558011	.	-	.	source_transcript=ENST00000423480.1;source_transcript_name=RBMY1KP-201;source_gene=ENSG00000229234.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229234.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423480.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423480.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1KP;alternative_source_transcripts=ENST00000423480.1;transcript_id=HG00140_ch_T0001474;gene_id=HG00140_ch_G0000491;Parent=HG00140_ch_T0001474;transcript_name=HG00140_ch_T0001474;gene_name=RBMY1KP;ID=exon:HG00140_ch_T0001474:0;Name=RBMY1KP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22558012	22561875	.	-	.	source_transcript=ENST00000423480.1;source_transcript_name=RBMY1KP-201;source_gene=ENSG00000229234.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229234.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423480.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423480.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1KP;alternative_source_transcripts=ENST00000423480.1;transcript_id=HG00140_ch_T0001474;gene_id=HG00140_ch_G0000491;Parent=HG00140_ch_T0001474;transcript_name=HG00140_ch_T0001474;gene_name=RBMY1KP;ID=intron:HG00140_ch_T0001474:0;Name=RBMY1KP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22561876	22562052	.	-	.	source_transcript=ENST00000423480.1;source_transcript_name=RBMY1KP-201;source_gene=ENSG00000229234.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229234.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423480.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423480.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1KP;alternative_source_transcripts=ENST00000423480.1;transcript_id=HG00140_ch_T0001474;gene_id=HG00140_ch_G0000491;Parent=HG00140_ch_T0001474;transcript_name=HG00140_ch_T0001474;gene_name=RBMY1KP;ID=exon:HG00140_ch_T0001474:1;Name=RBMY1KP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22562053	22564449	.	-	.	source_transcript=ENST00000423480.1;source_transcript_name=RBMY1KP-201;source_gene=ENSG00000229234.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229234.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423480.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423480.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1KP;alternative_source_transcripts=ENST00000423480.1;transcript_id=HG00140_ch_T0001474;gene_id=HG00140_ch_G0000491;Parent=HG00140_ch_T0001474;transcript_name=HG00140_ch_T0001474;gene_name=RBMY1KP;ID=intron:HG00140_ch_T0001474:1;Name=RBMY1KP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22564450	22564520	.	-	.	source_transcript=ENST00000423480.1;source_transcript_name=RBMY1KP-201;source_gene=ENSG00000229234.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229234.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423480.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423480.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1KP;alternative_source_transcripts=ENST00000423480.1;transcript_id=HG00140_ch_T0001474;gene_id=HG00140_ch_G0000491;Parent=HG00140_ch_T0001474;transcript_name=HG00140_ch_T0001474;gene_name=RBMY1KP;ID=exon:HG00140_ch_T0001474:2;Name=RBMY1KP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22564521	22565033	.	-	.	source_transcript=ENST00000423480.1;source_transcript_name=RBMY1KP-201;source_gene=ENSG00000229234.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229234.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423480.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423480.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1KP;alternative_source_transcripts=ENST00000423480.1;transcript_id=HG00140_ch_T0001474;gene_id=HG00140_ch_G0000491;Parent=HG00140_ch_T0001474;transcript_name=HG00140_ch_T0001474;gene_name=RBMY1KP;ID=intron:HG00140_ch_T0001474:2;Name=RBMY1KP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22565034	22565146	.	-	.	source_transcript=ENST00000423480.1;source_transcript_name=RBMY1KP-201;source_gene=ENSG00000229234.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229234.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423480.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423480.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1KP;alternative_source_transcripts=ENST00000423480.1;transcript_id=HG00140_ch_T0001474;gene_id=HG00140_ch_G0000491;Parent=HG00140_ch_T0001474;transcript_name=HG00140_ch_T0001474;gene_name=RBMY1KP;ID=exon:HG00140_ch_T0001474:3;Name=RBMY1KP;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	22570765	22576048	.	-	.	source_gene_common_name=RBMY2UP;source_gene=ENSG00000225615.1;alternative_source_transcripts=ENST00000453474.1;gene_id=HG00140_ch_G0000492;gene_biotype=unprocessed_pseudogene;gene_name=RBMY2UP;gene_sources=liftoff;ID=HG00140_ch_G0000492;Name=RBMY2UP
HG00140_chrY	CAT	transcript	22570765	22576048	1000	-	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1;transcript_id=HG00140_ch_T0001475;gene_id=HG00140_ch_G0000492;Parent=HG00140_ch_G0000492;transcript_name=HG00140_ch_T0001475;gene_name=RBMY2UP;ID=HG00140_ch_T0001475;Name=RBMY2UP
HG00140_chrY	CAT	exon	22570765	22570877	.	-	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1;transcript_id=HG00140_ch_T0001475;gene_id=HG00140_ch_G0000492;Parent=HG00140_ch_T0001475;transcript_name=HG00140_ch_T0001475;gene_name=RBMY2UP;ID=exon:HG00140_ch_T0001475:0;Name=RBMY2UP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22570878	22575434	.	-	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1;transcript_id=HG00140_ch_T0001475;gene_id=HG00140_ch_G0000492;Parent=HG00140_ch_T0001475;transcript_name=HG00140_ch_T0001475;gene_name=RBMY2UP;ID=intron:HG00140_ch_T0001475:0;Name=RBMY2UP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22575435	22575537	.	-	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1;transcript_id=HG00140_ch_T0001475;gene_id=HG00140_ch_G0000492;Parent=HG00140_ch_T0001475;transcript_name=HG00140_ch_T0001475;gene_name=RBMY2UP;ID=exon:HG00140_ch_T0001475:1;Name=RBMY2UP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22575538	22575940	.	-	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1;transcript_id=HG00140_ch_T0001475;gene_id=HG00140_ch_G0000492;Parent=HG00140_ch_T0001475;transcript_name=HG00140_ch_T0001475;gene_name=RBMY2UP;ID=intron:HG00140_ch_T0001475:1;Name=RBMY2UP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22575941	22576048	.	-	.	source_transcript=ENST00000453474.1;source_transcript_name=RBMY2UP-201;source_gene=ENSG00000225615.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225615.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453474.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2UP;alternative_source_transcripts=ENST00000453474.1;transcript_id=HG00140_ch_T0001475;gene_id=HG00140_ch_G0000492;Parent=HG00140_ch_T0001475;transcript_name=HG00140_ch_T0001475;gene_name=RBMY2UP;ID=exon:HG00140_ch_T0001475:2;Name=RBMY2UP;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	22588462	22590627	.	-	.	source_gene_common_name=TSPY21P;source_gene=ENSG00000237902.1;alternative_source_transcripts=ENST00000433481.1;gene_id=HG00140_ch_G0000493;gene_biotype=unprocessed_pseudogene;gene_name=TSPY21P;gene_sources=liftoff;ID=HG00140_ch_G0000493;Name=TSPY21P
HG00140_chrY	CAT	transcript	22588462	22590627	1000	-	.	source_transcript=ENST00000433481.1;source_transcript_name=TSPY21P-201;source_gene=ENSG00000237902.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237902.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433481.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY21P;alternative_source_transcripts=ENST00000433481.1;transcript_id=HG00140_ch_T0001476;gene_id=HG00140_ch_G0000493;Parent=HG00140_ch_G0000493;transcript_name=HG00140_ch_T0001476;gene_name=TSPY21P;ID=HG00140_ch_T0001476;Name=TSPY21P
HG00140_chrY	CAT	exon	22588462	22588503	.	-	.	source_transcript=ENST00000433481.1;source_transcript_name=TSPY21P-201;source_gene=ENSG00000237902.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237902.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY21P;alternative_source_transcripts=ENST00000433481.1;transcript_id=HG00140_ch_T0001476;gene_id=HG00140_ch_G0000493;Parent=HG00140_ch_T0001476;transcript_name=HG00140_ch_T0001476;gene_name=TSPY21P;ID=exon:HG00140_ch_T0001476:0;Name=TSPY21P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22588504	22588620	.	-	.	source_transcript=ENST00000433481.1;source_transcript_name=TSPY21P-201;source_gene=ENSG00000237902.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237902.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY21P;alternative_source_transcripts=ENST00000433481.1;transcript_id=HG00140_ch_T0001476;gene_id=HG00140_ch_G0000493;Parent=HG00140_ch_T0001476;transcript_name=HG00140_ch_T0001476;gene_name=TSPY21P;ID=intron:HG00140_ch_T0001476:0;Name=TSPY21P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22588621	22588764	.	-	.	source_transcript=ENST00000433481.1;source_transcript_name=TSPY21P-201;source_gene=ENSG00000237902.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237902.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY21P;alternative_source_transcripts=ENST00000433481.1;transcript_id=HG00140_ch_T0001476;gene_id=HG00140_ch_G0000493;Parent=HG00140_ch_T0001476;transcript_name=HG00140_ch_T0001476;gene_name=TSPY21P;ID=exon:HG00140_ch_T0001476:1;Name=TSPY21P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22588765	22588850	.	-	.	source_transcript=ENST00000433481.1;source_transcript_name=TSPY21P-201;source_gene=ENSG00000237902.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237902.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY21P;alternative_source_transcripts=ENST00000433481.1;transcript_id=HG00140_ch_T0001476;gene_id=HG00140_ch_G0000493;Parent=HG00140_ch_T0001476;transcript_name=HG00140_ch_T0001476;gene_name=TSPY21P;ID=intron:HG00140_ch_T0001476:1;Name=TSPY21P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22588851	22588916	.	-	.	source_transcript=ENST00000433481.1;source_transcript_name=TSPY21P-201;source_gene=ENSG00000237902.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237902.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY21P;alternative_source_transcripts=ENST00000433481.1;transcript_id=HG00140_ch_T0001476;gene_id=HG00140_ch_G0000493;Parent=HG00140_ch_T0001476;transcript_name=HG00140_ch_T0001476;gene_name=TSPY21P;ID=exon:HG00140_ch_T0001476:2;Name=TSPY21P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22588917	22589160	.	-	.	source_transcript=ENST00000433481.1;source_transcript_name=TSPY21P-201;source_gene=ENSG00000237902.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237902.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY21P;alternative_source_transcripts=ENST00000433481.1;transcript_id=HG00140_ch_T0001476;gene_id=HG00140_ch_G0000493;Parent=HG00140_ch_T0001476;transcript_name=HG00140_ch_T0001476;gene_name=TSPY21P;ID=intron:HG00140_ch_T0001476:2;Name=TSPY21P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22589161	22589245	.	-	.	source_transcript=ENST00000433481.1;source_transcript_name=TSPY21P-201;source_gene=ENSG00000237902.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237902.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY21P;alternative_source_transcripts=ENST00000433481.1;transcript_id=HG00140_ch_T0001476;gene_id=HG00140_ch_G0000493;Parent=HG00140_ch_T0001476;transcript_name=HG00140_ch_T0001476;gene_name=TSPY21P;ID=exon:HG00140_ch_T0001476:3;Name=TSPY21P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22589246	22590233	.	-	.	source_transcript=ENST00000433481.1;source_transcript_name=TSPY21P-201;source_gene=ENSG00000237902.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237902.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY21P;alternative_source_transcripts=ENST00000433481.1;transcript_id=HG00140_ch_T0001476;gene_id=HG00140_ch_G0000493;Parent=HG00140_ch_T0001476;transcript_name=HG00140_ch_T0001476;gene_name=TSPY21P;ID=intron:HG00140_ch_T0001476:3;Name=TSPY21P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22590234	22590627	.	-	.	source_transcript=ENST00000433481.1;source_transcript_name=TSPY21P-201;source_gene=ENSG00000237902.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237902.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY21P;alternative_source_transcripts=ENST00000433481.1;transcript_id=HG00140_ch_T0001476;gene_id=HG00140_ch_G0000493;Parent=HG00140_ch_T0001476;transcript_name=HG00140_ch_T0001476;gene_name=TSPY21P;ID=exon:HG00140_ch_T0001476:4;Name=TSPY21P;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	22591469	22605937	.	+	.	source_gene_common_name=RBMY1J;source_gene=ENSG00000226941.9;alternative_source_transcripts=ENST00000250831.6;gene_id=HG00140_ch_G0000494;gene_biotype=protein_coding;gene_name=RBMY1J;gene_sources=liftoff;ID=HG00140_ch_G0000494;Name=RBMY1J
HG00140_chrY	CAT	transcript	22591469	22605937	100	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00140_ch_T0001477;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_G0000494;transcript_name=HG00140_ch_T0001477;gene_name=RBMY1J;ID=HG00140_ch_T0001477;Name=RBMY1J
HG00140_chrY	CAT	exon	22591469	22591642	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00140_ch_T0001477;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001477;transcript_name=HG00140_ch_T0001477;gene_name=RBMY1J;ID=exon:HG00140_ch_T0001477:0;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22591643	22593503	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00140_ch_T0001477;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001477;transcript_name=HG00140_ch_T0001477;gene_name=RBMY1J;ID=intron:HG00140_ch_T0001477:0;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22593504	22593616	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00140_ch_T0001477;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001477;transcript_name=HG00140_ch_T0001477;gene_name=RBMY1J;ID=exon:HG00140_ch_T0001477:1;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22593508	22593616	.	+	0	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00140_ch_T0001477;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001477;transcript_name=HG00140_ch_T0001477;gene_name=RBMY1J;ID=CDS:HG00140_ch_T0001477:0;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	22593508	22593510	.	+	0	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00140_ch_T0001477;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001477;transcript_name=HG00140_ch_T0001477;gene_name=RBMY1J;ID=start_codon:HG00140_ch_T0001477;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22593617	22594080	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00140_ch_T0001477;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001477;transcript_name=HG00140_ch_T0001477;gene_name=RBMY1J;ID=intron:HG00140_ch_T0001477:1;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22594081	22594184	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00140_ch_T0001477;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001477;transcript_name=HG00140_ch_T0001477;gene_name=RBMY1J;ID=exon:HG00140_ch_T0001477:2;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22594081	22594184	.	+	2	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00140_ch_T0001477;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001477;transcript_name=HG00140_ch_T0001477;gene_name=RBMY1J;ID=CDS:HG00140_ch_T0001477:1;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22594185	22597207	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00140_ch_T0001477;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001477;transcript_name=HG00140_ch_T0001477;gene_name=RBMY1J;ID=intron:HG00140_ch_T0001477:2;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22597208	22597385	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00140_ch_T0001477;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001477;transcript_name=HG00140_ch_T0001477;gene_name=RBMY1J;ID=exon:HG00140_ch_T0001477:3;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22597208	22597385	.	+	0	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00140_ch_T0001477;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001477;transcript_name=HG00140_ch_T0001477;gene_name=RBMY1J;ID=CDS:HG00140_ch_T0001477:2;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22597386	22599300	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00140_ch_T0001477;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001477;transcript_name=HG00140_ch_T0001477;gene_name=RBMY1J;ID=intron:HG00140_ch_T0001477:3;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22599301	22599453	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00140_ch_T0001477;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001477;transcript_name=HG00140_ch_T0001477;gene_name=RBMY1J;ID=exon:HG00140_ch_T0001477:4;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22599301	22599453	.	+	2	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00140_ch_T0001477;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001477;transcript_name=HG00140_ch_T0001477;gene_name=RBMY1J;ID=CDS:HG00140_ch_T0001477:3;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22599454	22601463	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00140_ch_T0001477;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001477;transcript_name=HG00140_ch_T0001477;gene_name=RBMY1J;ID=intron:HG00140_ch_T0001477:4;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22601464	22601578	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00140_ch_T0001477;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001477;transcript_name=HG00140_ch_T0001477;gene_name=RBMY1J;ID=exon:HG00140_ch_T0001477:5;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22601464	22601578	.	+	2	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00140_ch_T0001477;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001477;transcript_name=HG00140_ch_T0001477;gene_name=RBMY1J;ID=CDS:HG00140_ch_T0001477:4;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22601579	22602533	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00140_ch_T0001477;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001477;transcript_name=HG00140_ch_T0001477;gene_name=RBMY1J;ID=intron:HG00140_ch_T0001477:5;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22602534	22602644	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00140_ch_T0001477;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001477;transcript_name=HG00140_ch_T0001477;gene_name=RBMY1J;ID=exon:HG00140_ch_T0001477:6;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22602534	22602644	.	+	1	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00140_ch_T0001477;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001477;transcript_name=HG00140_ch_T0001477;gene_name=RBMY1J;ID=CDS:HG00140_ch_T0001477:5;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22602645	22603084	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00140_ch_T0001477;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001477;transcript_name=HG00140_ch_T0001477;gene_name=RBMY1J;ID=intron:HG00140_ch_T0001477:6;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22603085	22603195	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00140_ch_T0001477;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001477;transcript_name=HG00140_ch_T0001477;gene_name=RBMY1J;ID=exon:HG00140_ch_T0001477:7;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22603085	22603195	.	+	1	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00140_ch_T0001477;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001477;transcript_name=HG00140_ch_T0001477;gene_name=RBMY1J;ID=CDS:HG00140_ch_T0001477:6;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22603196	22603629	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00140_ch_T0001477;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001477;transcript_name=HG00140_ch_T0001477;gene_name=RBMY1J;ID=intron:HG00140_ch_T0001477:7;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22603630	22603740	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00140_ch_T0001477;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001477;transcript_name=HG00140_ch_T0001477;gene_name=RBMY1J;ID=exon:HG00140_ch_T0001477:8;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22603630	22603740	.	+	1	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00140_ch_T0001477;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001477;transcript_name=HG00140_ch_T0001477;gene_name=RBMY1J;ID=CDS:HG00140_ch_T0001477:7;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22603741	22604663	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00140_ch_T0001477;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001477;transcript_name=HG00140_ch_T0001477;gene_name=RBMY1J;ID=intron:HG00140_ch_T0001477:8;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22604664	22604774	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00140_ch_T0001477;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001477;transcript_name=HG00140_ch_T0001477;gene_name=RBMY1J;ID=exon:HG00140_ch_T0001477:9;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22604664	22604774	.	+	1	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00140_ch_T0001477;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001477;transcript_name=HG00140_ch_T0001477;gene_name=RBMY1J;ID=CDS:HG00140_ch_T0001477:8;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22604775	22604860	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00140_ch_T0001477;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001477;transcript_name=HG00140_ch_T0001477;gene_name=RBMY1J;ID=intron:HG00140_ch_T0001477:9;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22604861	22604949	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00140_ch_T0001477;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001477;transcript_name=HG00140_ch_T0001477;gene_name=RBMY1J;ID=exon:HG00140_ch_T0001477:10;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22604861	22604949	.	+	1	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00140_ch_T0001477;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001477;transcript_name=HG00140_ch_T0001477;gene_name=RBMY1J;ID=CDS:HG00140_ch_T0001477:9;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22604950	22605360	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00140_ch_T0001477;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001477;transcript_name=HG00140_ch_T0001477;gene_name=RBMY1J;ID=intron:HG00140_ch_T0001477:10;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22605361	22605937	.	+	.	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00140_ch_T0001477;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001477;transcript_name=HG00140_ch_T0001477;gene_name=RBMY1J;ID=exon:HG00140_ch_T0001477:11;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	22605361	22605659	.	+	2	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00140_ch_T0001477;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001477;transcript_name=HG00140_ch_T0001477;gene_name=RBMY1J;ID=CDS:HG00140_ch_T0001477:10;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	22605657	22605659	.	+	0	source_transcript=ENST00000250831.6;source_transcript_name=RBMY1J-201;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250831.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250831.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000250831.6;transcript_id=HG00140_ch_T0001477;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001477;transcript_name=HG00140_ch_T0001477;gene_name=RBMY1J;ID=stop_codon:HG00140_ch_T0001477;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	22591520	22605937	1000	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG00140_ch_T0001478;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_G0000494;transcript_name=HG00140_ch_T0001478;gene_name=RBMY1J;ID=HG00140_ch_T0001478;Name=RBMY1J
HG00140_chrY	CAT	exon	22591520	22591642	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG00140_ch_T0001478;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001478;transcript_name=HG00140_ch_T0001478;gene_name=RBMY1J;ID=exon:HG00140_ch_T0001478:0;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22591643	22593503	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG00140_ch_T0001478;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001478;transcript_name=HG00140_ch_T0001478;gene_name=RBMY1J;ID=intron:HG00140_ch_T0001478:0;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22593504	22593616	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG00140_ch_T0001478;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001478;transcript_name=HG00140_ch_T0001478;gene_name=RBMY1J;ID=exon:HG00140_ch_T0001478:1;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22593617	22594080	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG00140_ch_T0001478;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001478;transcript_name=HG00140_ch_T0001478;gene_name=RBMY1J;ID=intron:HG00140_ch_T0001478:1;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22594081	22594184	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG00140_ch_T0001478;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001478;transcript_name=HG00140_ch_T0001478;gene_name=RBMY1J;ID=exon:HG00140_ch_T0001478:2;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22594185	22599300	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG00140_ch_T0001478;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001478;transcript_name=HG00140_ch_T0001478;gene_name=RBMY1J;ID=intron:HG00140_ch_T0001478:2;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22599301	22599453	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG00140_ch_T0001478;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001478;transcript_name=HG00140_ch_T0001478;gene_name=RBMY1J;ID=exon:HG00140_ch_T0001478:3;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22599454	22601463	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG00140_ch_T0001478;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001478;transcript_name=HG00140_ch_T0001478;gene_name=RBMY1J;ID=intron:HG00140_ch_T0001478:3;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22601464	22601578	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG00140_ch_T0001478;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001478;transcript_name=HG00140_ch_T0001478;gene_name=RBMY1J;ID=exon:HG00140_ch_T0001478:4;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22601579	22602533	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG00140_ch_T0001478;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001478;transcript_name=HG00140_ch_T0001478;gene_name=RBMY1J;ID=intron:HG00140_ch_T0001478:4;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22602534	22602644	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG00140_ch_T0001478;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001478;transcript_name=HG00140_ch_T0001478;gene_name=RBMY1J;ID=exon:HG00140_ch_T0001478:5;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22602645	22603084	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG00140_ch_T0001478;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001478;transcript_name=HG00140_ch_T0001478;gene_name=RBMY1J;ID=intron:HG00140_ch_T0001478:5;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22603085	22603195	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG00140_ch_T0001478;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001478;transcript_name=HG00140_ch_T0001478;gene_name=RBMY1J;ID=exon:HG00140_ch_T0001478:6;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22603196	22603629	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG00140_ch_T0001478;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001478;transcript_name=HG00140_ch_T0001478;gene_name=RBMY1J;ID=intron:HG00140_ch_T0001478:6;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22603630	22603740	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG00140_ch_T0001478;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001478;transcript_name=HG00140_ch_T0001478;gene_name=RBMY1J;ID=exon:HG00140_ch_T0001478:7;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22603741	22604663	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG00140_ch_T0001478;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001478;transcript_name=HG00140_ch_T0001478;gene_name=RBMY1J;ID=intron:HG00140_ch_T0001478:7;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22604664	22604774	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG00140_ch_T0001478;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001478;transcript_name=HG00140_ch_T0001478;gene_name=RBMY1J;ID=exon:HG00140_ch_T0001478:8;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22604775	22604860	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG00140_ch_T0001478;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001478;transcript_name=HG00140_ch_T0001478;gene_name=RBMY1J;ID=intron:HG00140_ch_T0001478:8;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22604861	22604949	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG00140_ch_T0001478;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001478;transcript_name=HG00140_ch_T0001478;gene_name=RBMY1J;ID=exon:HG00140_ch_T0001478:9;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22604950	22605360	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG00140_ch_T0001478;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001478;transcript_name=HG00140_ch_T0001478;gene_name=RBMY1J;ID=intron:HG00140_ch_T0001478:9;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22605361	22605937	.	+	.	source_transcript=ENST00000470460.1;source_transcript_name=RBMY1J-202;source_gene=ENSG00000226941.9;source_gene_biotype=protein_coding;original_gene_id=ENSG00000226941.9;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000470460.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000470460.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=ENST00000470460.1,ENST00000481858.1;transcript_id=HG00140_ch_T0001478;gene_id=HG00140_ch_G0000494;Parent=HG00140_ch_T0001478;transcript_name=HG00140_ch_T0001478;gene_name=RBMY1J;ID=exon:HG00140_ch_T0001478:10;Name=RBMY1J;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	22626980	22702714	.	+	.	source_gene_common_name=ENSG00000235059;source_gene=ENSG00000235059.7;alternative_source_transcripts=ENST00000446299.6;gene_id=HG00140_ch_G0000495;gene_biotype=lncRNA;gene_name=ENSG00000235059;gene_sources=liftoff;ID=HG00140_ch_G0000495;Name=ENSG00000235059
HG00140_chrY	CAT	transcript	22626980	22672782	1000	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00140_ch_T0001479;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_G0000495;transcript_name=HG00140_ch_T0001479;gene_name=ENSG00000235059;ID=HG00140_ch_T0001479;Name=ENSG00000235059
HG00140_chrY	CAT	exon	22626980	22627196	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00140_ch_T0001479;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001479;transcript_name=HG00140_ch_T0001479;gene_name=ENSG00000235059;ID=exon:HG00140_ch_T0001479:0;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22627197	22627530	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00140_ch_T0001479;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001479;transcript_name=HG00140_ch_T0001479;gene_name=ENSG00000235059;ID=intron:HG00140_ch_T0001479:0;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22627531	22627840	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00140_ch_T0001479;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001479;transcript_name=HG00140_ch_T0001479;gene_name=ENSG00000235059;ID=exon:HG00140_ch_T0001479:1;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22627841	22634387	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00140_ch_T0001479;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001479;transcript_name=HG00140_ch_T0001479;gene_name=ENSG00000235059;ID=intron:HG00140_ch_T0001479:1;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22634388	22634528	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00140_ch_T0001479;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001479;transcript_name=HG00140_ch_T0001479;gene_name=ENSG00000235059;ID=exon:HG00140_ch_T0001479:2;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22634529	22644503	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00140_ch_T0001479;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001479;transcript_name=HG00140_ch_T0001479;gene_name=ENSG00000235059;ID=intron:HG00140_ch_T0001479:2;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22644504	22644726	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00140_ch_T0001479;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001479;transcript_name=HG00140_ch_T0001479;gene_name=ENSG00000235059;ID=exon:HG00140_ch_T0001479:3;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22644727	22645034	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00140_ch_T0001479;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001479;transcript_name=HG00140_ch_T0001479;gene_name=ENSG00000235059;ID=intron:HG00140_ch_T0001479:3;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22645035	22645120	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00140_ch_T0001479;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001479;transcript_name=HG00140_ch_T0001479;gene_name=ENSG00000235059;ID=exon:HG00140_ch_T0001479:4;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22645121	22652300	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00140_ch_T0001479;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001479;transcript_name=HG00140_ch_T0001479;gene_name=ENSG00000235059;ID=intron:HG00140_ch_T0001479:4;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22652301	22652419	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00140_ch_T0001479;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001479;transcript_name=HG00140_ch_T0001479;gene_name=ENSG00000235059;ID=exon:HG00140_ch_T0001479:5;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22652420	22652849	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00140_ch_T0001479;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001479;transcript_name=HG00140_ch_T0001479;gene_name=ENSG00000235059;ID=intron:HG00140_ch_T0001479:5;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22652850	22653203	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00140_ch_T0001479;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001479;transcript_name=HG00140_ch_T0001479;gene_name=ENSG00000235059;ID=exon:HG00140_ch_T0001479:6;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22653204	22666832	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00140_ch_T0001479;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001479;transcript_name=HG00140_ch_T0001479;gene_name=ENSG00000235059;ID=intron:HG00140_ch_T0001479:6;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22666833	22666922	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00140_ch_T0001479;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001479;transcript_name=HG00140_ch_T0001479;gene_name=ENSG00000235059;ID=exon:HG00140_ch_T0001479:7;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22666923	22668388	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00140_ch_T0001479;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001479;transcript_name=HG00140_ch_T0001479;gene_name=ENSG00000235059;ID=intron:HG00140_ch_T0001479:7;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22668389	22668724	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00140_ch_T0001479;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001479;transcript_name=HG00140_ch_T0001479;gene_name=ENSG00000235059;ID=exon:HG00140_ch_T0001479:8;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22668725	22670524	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00140_ch_T0001479;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001479;transcript_name=HG00140_ch_T0001479;gene_name=ENSG00000235059;ID=intron:HG00140_ch_T0001479:8;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22670525	22670610	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00140_ch_T0001479;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001479;transcript_name=HG00140_ch_T0001479;gene_name=ENSG00000235059;ID=exon:HG00140_ch_T0001479:9;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22670611	22670730	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00140_ch_T0001479;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001479;transcript_name=HG00140_ch_T0001479;gene_name=ENSG00000235059;ID=intron:HG00140_ch_T0001479:9;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22670731	22670927	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00140_ch_T0001479;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001479;transcript_name=HG00140_ch_T0001479;gene_name=ENSG00000235059;ID=exon:HG00140_ch_T0001479:10;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22670928	22671471	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00140_ch_T0001479;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001479;transcript_name=HG00140_ch_T0001479;gene_name=ENSG00000235059;ID=intron:HG00140_ch_T0001479:10;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22671472	22671589	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00140_ch_T0001479;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001479;transcript_name=HG00140_ch_T0001479;gene_name=ENSG00000235059;ID=exon:HG00140_ch_T0001479:11;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22671590	22672104	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00140_ch_T0001479;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001479;transcript_name=HG00140_ch_T0001479;gene_name=ENSG00000235059;ID=intron:HG00140_ch_T0001479:11;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22672105	22672782	.	+	.	source_transcript=ENST00000446299.6;source_transcript_name=ENST00000446299;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000446299.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000446299.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000446299.6;transcript_id=HG00140_ch_T0001479;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001479;transcript_name=HG00140_ch_T0001479;gene_name=ENSG00000235059;ID=exon:HG00140_ch_T0001479:12;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	22653007	22672969	1000	+	.	source_transcript=ENST00000801163.1;source_transcript_name=ENST00000801163;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801163.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801163.1;transcript_id=HG00140_ch_T0001482;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_G0000495;transcript_name=HG00140_ch_T0001482;gene_name=ENSG00000235059;ID=HG00140_ch_T0001482;Name=ENSG00000235059
HG00140_chrY	CAT	exon	22653007	22653203	.	+	.	source_transcript=ENST00000801163.1;source_transcript_name=ENST00000801163;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801163.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801163.1;transcript_id=HG00140_ch_T0001482;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001482;transcript_name=HG00140_ch_T0001482;gene_name=ENSG00000235059;ID=exon:HG00140_ch_T0001482:0;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22653204	22671467	.	+	.	source_transcript=ENST00000801163.1;source_transcript_name=ENST00000801163;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801163.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801163.1;transcript_id=HG00140_ch_T0001482;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001482;transcript_name=HG00140_ch_T0001482;gene_name=ENSG00000235059;ID=intron:HG00140_ch_T0001482:0;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22671468	22671589	.	+	.	source_transcript=ENST00000801163.1;source_transcript_name=ENST00000801163;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801163.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801163.1;transcript_id=HG00140_ch_T0001482;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001482;transcript_name=HG00140_ch_T0001482;gene_name=ENSG00000235059;ID=exon:HG00140_ch_T0001482:1;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22671590	22672104	.	+	.	source_transcript=ENST00000801163.1;source_transcript_name=ENST00000801163;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801163.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801163.1;transcript_id=HG00140_ch_T0001482;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001482;transcript_name=HG00140_ch_T0001482;gene_name=ENSG00000235059;ID=intron:HG00140_ch_T0001482:1;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22672105	22672969	.	+	.	source_transcript=ENST00000801163.1;source_transcript_name=ENST00000801163;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801163.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801163.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801163.1;transcript_id=HG00140_ch_T0001482;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001482;transcript_name=HG00140_ch_T0001482;gene_name=ENSG00000235059;ID=exon:HG00140_ch_T0001482:2;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	22666761	22672962	1000	+	.	source_transcript=ENST00000801164.1;source_transcript_name=ENST00000801164;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801164.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801164.1;transcript_id=HG00140_ch_T0001483;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_G0000495;transcript_name=HG00140_ch_T0001483;gene_name=ENSG00000235059;ID=HG00140_ch_T0001483;Name=ENSG00000235059
HG00140_chrY	CAT	exon	22666761	22666922	.	+	.	source_transcript=ENST00000801164.1;source_transcript_name=ENST00000801164;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801164.1;transcript_id=HG00140_ch_T0001483;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001483;transcript_name=HG00140_ch_T0001483;gene_name=ENSG00000235059;ID=exon:HG00140_ch_T0001483:0;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22666923	22668388	.	+	.	source_transcript=ENST00000801164.1;source_transcript_name=ENST00000801164;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801164.1;transcript_id=HG00140_ch_T0001483;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001483;transcript_name=HG00140_ch_T0001483;gene_name=ENSG00000235059;ID=intron:HG00140_ch_T0001483:0;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22668389	22668724	.	+	.	source_transcript=ENST00000801164.1;source_transcript_name=ENST00000801164;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801164.1;transcript_id=HG00140_ch_T0001483;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001483;transcript_name=HG00140_ch_T0001483;gene_name=ENSG00000235059;ID=exon:HG00140_ch_T0001483:1;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22668725	22671467	.	+	.	source_transcript=ENST00000801164.1;source_transcript_name=ENST00000801164;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801164.1;transcript_id=HG00140_ch_T0001483;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001483;transcript_name=HG00140_ch_T0001483;gene_name=ENSG00000235059;ID=intron:HG00140_ch_T0001483:1;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22671468	22671589	.	+	.	source_transcript=ENST00000801164.1;source_transcript_name=ENST00000801164;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801164.1;transcript_id=HG00140_ch_T0001483;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001483;transcript_name=HG00140_ch_T0001483;gene_name=ENSG00000235059;ID=exon:HG00140_ch_T0001483:2;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22671590	22672104	.	+	.	source_transcript=ENST00000801164.1;source_transcript_name=ENST00000801164;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801164.1;transcript_id=HG00140_ch_T0001483;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001483;transcript_name=HG00140_ch_T0001483;gene_name=ENSG00000235059;ID=intron:HG00140_ch_T0001483:2;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22672105	22672962	.	+	.	source_transcript=ENST00000801164.1;source_transcript_name=ENST00000801164;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801164.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801164.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000801164.1;transcript_id=HG00140_ch_T0001483;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001483;transcript_name=HG00140_ch_T0001483;gene_name=ENSG00000235059;ID=exon:HG00140_ch_T0001483:3;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	22668605	22673660	1000	+	.	source_transcript=ENST00000439653.1;source_transcript_name=ENST00000439653;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439653.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439653.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000439653.1;transcript_id=HG00140_ch_T0001484;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_G0000495;transcript_name=HG00140_ch_T0001484;gene_name=ENSG00000235059;ID=HG00140_ch_T0001484;Name=ENSG00000235059
HG00140_chrY	CAT	exon	22668605	22668724	.	+	.	source_transcript=ENST00000439653.1;source_transcript_name=ENST00000439653;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439653.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439653.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000439653.1;transcript_id=HG00140_ch_T0001484;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001484;transcript_name=HG00140_ch_T0001484;gene_name=ENSG00000235059;ID=exon:HG00140_ch_T0001484:0;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22668725	22671471	.	+	.	source_transcript=ENST00000439653.1;source_transcript_name=ENST00000439653;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439653.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439653.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000439653.1;transcript_id=HG00140_ch_T0001484;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001484;transcript_name=HG00140_ch_T0001484;gene_name=ENSG00000235059;ID=intron:HG00140_ch_T0001484:0;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22671472	22671589	.	+	.	source_transcript=ENST00000439653.1;source_transcript_name=ENST00000439653;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439653.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439653.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000439653.1;transcript_id=HG00140_ch_T0001484;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001484;transcript_name=HG00140_ch_T0001484;gene_name=ENSG00000235059;ID=exon:HG00140_ch_T0001484:1;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22671590	22672104	.	+	.	source_transcript=ENST00000439653.1;source_transcript_name=ENST00000439653;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439653.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439653.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000439653.1;transcript_id=HG00140_ch_T0001484;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001484;transcript_name=HG00140_ch_T0001484;gene_name=ENSG00000235059;ID=intron:HG00140_ch_T0001484:1;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22672105	22672369	.	+	.	source_transcript=ENST00000439653.1;source_transcript_name=ENST00000439653;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439653.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439653.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000439653.1;transcript_id=HG00140_ch_T0001484;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001484;transcript_name=HG00140_ch_T0001484;gene_name=ENSG00000235059;ID=exon:HG00140_ch_T0001484:2;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22672370	22673418	.	+	.	source_transcript=ENST00000439653.1;source_transcript_name=ENST00000439653;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439653.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439653.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000439653.1;transcript_id=HG00140_ch_T0001484;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001484;transcript_name=HG00140_ch_T0001484;gene_name=ENSG00000235059;ID=intron:HG00140_ch_T0001484:2;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22673419	22673660	.	+	.	source_transcript=ENST00000439653.1;source_transcript_name=ENST00000439653;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000439653.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439653.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000439653.1;transcript_id=HG00140_ch_T0001484;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001484;transcript_name=HG00140_ch_T0001484;gene_name=ENSG00000235059;ID=exon:HG00140_ch_T0001484:3;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	22672105	22702714	1000	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6;transcript_id=HG00140_ch_T0001485;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_G0000495;transcript_name=HG00140_ch_T0001485;gene_name=ENSG00000235059;ID=HG00140_ch_T0001485;Name=ENSG00000235059
HG00140_chrY	CAT	exon	22672105	22672369	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6;transcript_id=HG00140_ch_T0001485;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001485;transcript_name=HG00140_ch_T0001485;gene_name=ENSG00000235059;ID=exon:HG00140_ch_T0001485:0;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22672370	22678466	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6;transcript_id=HG00140_ch_T0001485;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001485;transcript_name=HG00140_ch_T0001485;gene_name=ENSG00000235059;ID=intron:HG00140_ch_T0001485:0;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22678467	22678555	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6;transcript_id=HG00140_ch_T0001485;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001485;transcript_name=HG00140_ch_T0001485;gene_name=ENSG00000235059;ID=exon:HG00140_ch_T0001485:1;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22678556	22678656	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6;transcript_id=HG00140_ch_T0001485;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001485;transcript_name=HG00140_ch_T0001485;gene_name=ENSG00000235059;ID=intron:HG00140_ch_T0001485:1;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22678657	22678743	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6;transcript_id=HG00140_ch_T0001485;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001485;transcript_name=HG00140_ch_T0001485;gene_name=ENSG00000235059;ID=exon:HG00140_ch_T0001485:2;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22678744	22689586	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6;transcript_id=HG00140_ch_T0001485;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001485;transcript_name=HG00140_ch_T0001485;gene_name=ENSG00000235059;ID=intron:HG00140_ch_T0001485:2;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22689587	22689707	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6;transcript_id=HG00140_ch_T0001485;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001485;transcript_name=HG00140_ch_T0001485;gene_name=ENSG00000235059;ID=exon:HG00140_ch_T0001485:3;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22689708	22692282	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6;transcript_id=HG00140_ch_T0001485;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001485;transcript_name=HG00140_ch_T0001485;gene_name=ENSG00000235059;ID=intron:HG00140_ch_T0001485:3;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22692283	22692398	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6;transcript_id=HG00140_ch_T0001485;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001485;transcript_name=HG00140_ch_T0001485;gene_name=ENSG00000235059;ID=exon:HG00140_ch_T0001485:4;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22692399	22701888	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6;transcript_id=HG00140_ch_T0001485;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001485;transcript_name=HG00140_ch_T0001485;gene_name=ENSG00000235059;ID=intron:HG00140_ch_T0001485:4;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22701889	22702714	.	+	.	source_transcript=ENST00000303728.6;source_transcript_name=ENST00000303728;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000303728.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000303728.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000303728.6;transcript_id=HG00140_ch_T0001485;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001485;transcript_name=HG00140_ch_T0001485;gene_name=ENSG00000235059;ID=exon:HG00140_ch_T0001485:5;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	22672105	22702714	1000	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2;transcript_id=HG00140_ch_T0001486;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_G0000495;transcript_name=HG00140_ch_T0001486;gene_name=ENSG00000235059;ID=HG00140_ch_T0001486;Name=ENSG00000235059
HG00140_chrY	CAT	exon	22672105	22672369	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2;transcript_id=HG00140_ch_T0001486;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001486;transcript_name=HG00140_ch_T0001486;gene_name=ENSG00000235059;ID=exon:HG00140_ch_T0001486:0;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22672370	22678466	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2;transcript_id=HG00140_ch_T0001486;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001486;transcript_name=HG00140_ch_T0001486;gene_name=ENSG00000235059;ID=intron:HG00140_ch_T0001486:0;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22678467	22678555	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2;transcript_id=HG00140_ch_T0001486;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001486;transcript_name=HG00140_ch_T0001486;gene_name=ENSG00000235059;ID=exon:HG00140_ch_T0001486:1;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22678556	22678656	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2;transcript_id=HG00140_ch_T0001486;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001486;transcript_name=HG00140_ch_T0001486;gene_name=ENSG00000235059;ID=intron:HG00140_ch_T0001486:1;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22678657	22678743	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2;transcript_id=HG00140_ch_T0001486;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001486;transcript_name=HG00140_ch_T0001486;gene_name=ENSG00000235059;ID=exon:HG00140_ch_T0001486:2;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22678744	22689586	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2;transcript_id=HG00140_ch_T0001486;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001486;transcript_name=HG00140_ch_T0001486;gene_name=ENSG00000235059;ID=intron:HG00140_ch_T0001486:2;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22689587	22689707	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2;transcript_id=HG00140_ch_T0001486;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001486;transcript_name=HG00140_ch_T0001486;gene_name=ENSG00000235059;ID=exon:HG00140_ch_T0001486:3;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22689708	22692282	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2;transcript_id=HG00140_ch_T0001486;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001486;transcript_name=HG00140_ch_T0001486;gene_name=ENSG00000235059;ID=intron:HG00140_ch_T0001486:3;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22692283	22692398	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2;transcript_id=HG00140_ch_T0001486;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001486;transcript_name=HG00140_ch_T0001486;gene_name=ENSG00000235059;ID=exon:HG00140_ch_T0001486:4;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22692399	22700711	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2;transcript_id=HG00140_ch_T0001486;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001486;transcript_name=HG00140_ch_T0001486;gene_name=ENSG00000235059;ID=intron:HG00140_ch_T0001486:4;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22700712	22700826	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2;transcript_id=HG00140_ch_T0001486;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001486;transcript_name=HG00140_ch_T0001486;gene_name=ENSG00000235059;ID=exon:HG00140_ch_T0001486:5;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22700827	22701888	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2;transcript_id=HG00140_ch_T0001486;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001486;transcript_name=HG00140_ch_T0001486;gene_name=ENSG00000235059;ID=intron:HG00140_ch_T0001486:5;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22701889	22702714	.	+	.	source_transcript=ENST00000477123.2;source_transcript_name=ENST00000477123;source_gene=ENSG00000235059.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235059.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000477123.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000477123.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235059;alternative_source_transcripts=ENST00000477123.2;transcript_id=HG00140_ch_T0001486;gene_id=HG00140_ch_G0000495;Parent=HG00140_ch_T0001486;transcript_name=HG00140_ch_T0001486;gene_name=ENSG00000235059;ID=exon:HG00140_ch_T0001486:6;Name=ENSG00000235059;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	22627649	22642541	.	-	.	source_gene_common_name=TTTY6;source_gene=ENSG00000131538.8;alternative_source_transcripts=ENST00000253838.4;gene_id=HG00140_ch_G0000496;gene_biotype=lncRNA;gene_name=TTTY6;gene_sources=liftoff;ID=HG00140_ch_G0000496;Name=TTTY6
HG00140_chrY	CAT	transcript	22627649	22642541	1000	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4;transcript_id=HG00140_ch_T0001480;gene_id=HG00140_ch_G0000496;Parent=HG00140_ch_G0000496;transcript_name=HG00140_ch_T0001480;gene_name=TTTY6;ID=HG00140_ch_T0001480;Name=TTTY6
HG00140_chrY	CAT	exon	22627649	22627887	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4;transcript_id=HG00140_ch_T0001480;gene_id=HG00140_ch_G0000496;Parent=HG00140_ch_T0001480;transcript_name=HG00140_ch_T0001480;gene_name=TTTY6;ID=exon:HG00140_ch_T0001480:0;Name=TTTY6;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22627888	22629044	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4;transcript_id=HG00140_ch_T0001480;gene_id=HG00140_ch_G0000496;Parent=HG00140_ch_T0001480;transcript_name=HG00140_ch_T0001480;gene_name=TTTY6;ID=intron:HG00140_ch_T0001480:0;Name=TTTY6;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22629045	22629182	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4;transcript_id=HG00140_ch_T0001480;gene_id=HG00140_ch_G0000496;Parent=HG00140_ch_T0001480;transcript_name=HG00140_ch_T0001480;gene_name=TTTY6;ID=exon:HG00140_ch_T0001480:1;Name=TTTY6;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22629183	22629400	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4;transcript_id=HG00140_ch_T0001480;gene_id=HG00140_ch_G0000496;Parent=HG00140_ch_T0001480;transcript_name=HG00140_ch_T0001480;gene_name=TTTY6;ID=intron:HG00140_ch_T0001480:1;Name=TTTY6;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22629401	22629514	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4;transcript_id=HG00140_ch_T0001480;gene_id=HG00140_ch_G0000496;Parent=HG00140_ch_T0001480;transcript_name=HG00140_ch_T0001480;gene_name=TTTY6;ID=exon:HG00140_ch_T0001480:2;Name=TTTY6;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22629515	22632679	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4;transcript_id=HG00140_ch_T0001480;gene_id=HG00140_ch_G0000496;Parent=HG00140_ch_T0001480;transcript_name=HG00140_ch_T0001480;gene_name=TTTY6;ID=intron:HG00140_ch_T0001480:2;Name=TTTY6;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22632680	22632840	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4;transcript_id=HG00140_ch_T0001480;gene_id=HG00140_ch_G0000496;Parent=HG00140_ch_T0001480;transcript_name=HG00140_ch_T0001480;gene_name=TTTY6;ID=exon:HG00140_ch_T0001480:3;Name=TTTY6;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22632841	22635122	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4;transcript_id=HG00140_ch_T0001480;gene_id=HG00140_ch_G0000496;Parent=HG00140_ch_T0001480;transcript_name=HG00140_ch_T0001480;gene_name=TTTY6;ID=intron:HG00140_ch_T0001480:3;Name=TTTY6;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22635123	22635284	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4;transcript_id=HG00140_ch_T0001480;gene_id=HG00140_ch_G0000496;Parent=HG00140_ch_T0001480;transcript_name=HG00140_ch_T0001480;gene_name=TTTY6;ID=exon:HG00140_ch_T0001480:4;Name=TTTY6;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22635285	22640025	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4;transcript_id=HG00140_ch_T0001480;gene_id=HG00140_ch_G0000496;Parent=HG00140_ch_T0001480;transcript_name=HG00140_ch_T0001480;gene_name=TTTY6;ID=intron:HG00140_ch_T0001480:4;Name=TTTY6;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22640026	22640099	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4;transcript_id=HG00140_ch_T0001480;gene_id=HG00140_ch_G0000496;Parent=HG00140_ch_T0001480;transcript_name=HG00140_ch_T0001480;gene_name=TTTY6;ID=exon:HG00140_ch_T0001480:5;Name=TTTY6;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22640100	22642486	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4;transcript_id=HG00140_ch_T0001480;gene_id=HG00140_ch_G0000496;Parent=HG00140_ch_T0001480;transcript_name=HG00140_ch_T0001480;gene_name=TTTY6;ID=intron:HG00140_ch_T0001480:5;Name=TTTY6;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22642487	22642541	.	-	.	source_transcript=ENST00000253838.4;source_transcript_name=TTTY6-201;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000253838.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000253838.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000253838.4;transcript_id=HG00140_ch_T0001480;gene_id=HG00140_ch_G0000496;Parent=HG00140_ch_T0001480;transcript_name=HG00140_ch_T0001480;gene_name=TTTY6;ID=exon:HG00140_ch_T0001480:6;Name=TTTY6;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	22627651	22631790	1000	-	.	source_transcript=ENST00000769610.1;source_transcript_name=TTTY6-202;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000769610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000769610.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000769610.1;transcript_id=HG00140_ch_T0001481;gene_id=HG00140_ch_G0000496;Parent=HG00140_ch_G0000496;transcript_name=HG00140_ch_T0001481;gene_name=TTTY6;ID=HG00140_ch_T0001481;Name=TTTY6
HG00140_chrY	CAT	exon	22627651	22627887	.	-	.	source_transcript=ENST00000769610.1;source_transcript_name=TTTY6-202;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000769610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000769610.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000769610.1;transcript_id=HG00140_ch_T0001481;gene_id=HG00140_ch_G0000496;Parent=HG00140_ch_T0001481;transcript_name=HG00140_ch_T0001481;gene_name=TTTY6;ID=exon:HG00140_ch_T0001481:0;Name=TTTY6;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22627888	22631509	.	-	.	source_transcript=ENST00000769610.1;source_transcript_name=TTTY6-202;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000769610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000769610.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000769610.1;transcript_id=HG00140_ch_T0001481;gene_id=HG00140_ch_G0000496;Parent=HG00140_ch_T0001481;transcript_name=HG00140_ch_T0001481;gene_name=TTTY6;ID=intron:HG00140_ch_T0001481:0;Name=TTTY6;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22631510	22631790	.	-	.	source_transcript=ENST00000769610.1;source_transcript_name=TTTY6-202;source_gene=ENSG00000131538.8;source_gene_biotype=lncRNA;original_gene_id=ENSG00000131538.8;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000769610.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000769610.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=ENST00000769610.1;transcript_id=HG00140_ch_T0001481;gene_id=HG00140_ch_G0000496;Parent=HG00140_ch_T0001481;transcript_name=HG00140_ch_T0001481;gene_name=TTTY6;ID=exon:HG00140_ch_T0001481:1;Name=TTTY6;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	22705319	22705650	.	-	.	source_gene_common_name=ELOCP8;source_gene=ENSG00000234131.1;alternative_source_transcripts=ENST00000439309.1;gene_id=HG00140_ch_G0000497;gene_biotype=processed_pseudogene;gene_name=ELOCP8;gene_sources=liftoff;ID=HG00140_ch_G0000497;Name=ELOCP8
HG00140_chrY	CAT	transcript	22705319	22705650	1000	-	.	source_transcript=ENST00000439309.1;source_transcript_name=ELOCP8-201;source_gene=ENSG00000234131.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234131.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000439309.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439309.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP8;alternative_source_transcripts=ENST00000439309.1;transcript_id=HG00140_ch_T0001487;gene_id=HG00140_ch_G0000497;Parent=HG00140_ch_G0000497;transcript_name=HG00140_ch_T0001487;gene_name=ELOCP8;ID=HG00140_ch_T0001487;Name=ELOCP8
HG00140_chrY	CAT	exon	22705319	22705650	.	-	.	source_transcript=ENST00000439309.1;source_transcript_name=ELOCP8-201;source_gene=ENSG00000234131.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234131.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000439309.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439309.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP8;alternative_source_transcripts=ENST00000439309.1;transcript_id=HG00140_ch_T0001487;gene_id=HG00140_ch_G0000497;Parent=HG00140_ch_T0001487;transcript_name=HG00140_ch_T0001487;gene_name=ELOCP8;ID=exon:HG00140_ch_T0001487:0;Name=ELOCP8;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	22708758	22709772	.	-	.	source_gene_common_name=CDY13P;source_gene=ENSG00000224873.1;alternative_source_transcripts=ENST00000445813.1;gene_id=HG00140_ch_G0000498;gene_biotype=unprocessed_pseudogene;gene_name=CDY13P;gene_sources=liftoff;ID=HG00140_ch_G0000498;Name=CDY13P
HG00140_chrY	CAT	transcript	22708758	22709772	1000	-	.	source_transcript=ENST00000445813.1;source_transcript_name=CDY13P-201;source_gene=ENSG00000224873.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224873.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445813.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY13P;alternative_source_transcripts=ENST00000445813.1;transcript_id=HG00140_ch_T0001488;gene_id=HG00140_ch_G0000498;Parent=HG00140_ch_G0000498;transcript_name=HG00140_ch_T0001488;gene_name=CDY13P;ID=HG00140_ch_T0001488;Name=CDY13P
HG00140_chrY	CAT	exon	22708758	22709772	.	-	.	source_transcript=ENST00000445813.1;source_transcript_name=CDY13P-201;source_gene=ENSG00000224873.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224873.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445813.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445813.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY13P;alternative_source_transcripts=ENST00000445813.1;transcript_id=HG00140_ch_T0001488;gene_id=HG00140_ch_G0000498;Parent=HG00140_ch_T0001488;transcript_name=HG00140_ch_T0001488;gene_name=CDY13P;ID=exon:HG00140_ch_T0001488:0;Name=CDY13P;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	22716357	22724715	.	+	.	source_gene_common_name=USP9YP24;source_gene=ENSG00000230814.1;alternative_source_transcripts=ENST00000434374.1;gene_id=HG00140_ch_G0000499;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP24;gene_sources=liftoff;ID=HG00140_ch_G0000499;Name=USP9YP24
HG00140_chrY	CAT	transcript	22716357	22724715	1000	+	.	source_transcript=ENST00000434374.1;source_transcript_name=USP9YP24-201;source_gene=ENSG00000230814.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230814.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434374.1;transcript_score=299.85699999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP24;alternative_source_transcripts=ENST00000434374.1;transcript_id=HG00140_ch_T0001489;gene_id=HG00140_ch_G0000499;Parent=HG00140_ch_G0000499;transcript_name=HG00140_ch_T0001489;gene_name=USP9YP24;ID=HG00140_ch_T0001489;Name=USP9YP24
HG00140_chrY	CAT	exon	22716357	22716577	.	+	.	source_transcript=ENST00000434374.1;source_transcript_name=USP9YP24-201;source_gene=ENSG00000230814.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230814.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434374.1;transcript_score=299.85699999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP24;alternative_source_transcripts=ENST00000434374.1;transcript_id=HG00140_ch_T0001489;gene_id=HG00140_ch_G0000499;Parent=HG00140_ch_T0001489;transcript_name=HG00140_ch_T0001489;gene_name=USP9YP24;ID=exon:HG00140_ch_T0001489:0;Name=USP9YP24;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22716578	22718379	.	+	.	source_transcript=ENST00000434374.1;source_transcript_name=USP9YP24-201;source_gene=ENSG00000230814.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230814.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434374.1;transcript_score=299.85699999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP24;alternative_source_transcripts=ENST00000434374.1;transcript_id=HG00140_ch_T0001489;gene_id=HG00140_ch_G0000499;Parent=HG00140_ch_T0001489;transcript_name=HG00140_ch_T0001489;gene_name=USP9YP24;ID=intron:HG00140_ch_T0001489:0;Name=USP9YP24;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22718380	22718498	.	+	.	source_transcript=ENST00000434374.1;source_transcript_name=USP9YP24-201;source_gene=ENSG00000230814.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230814.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434374.1;transcript_score=299.85699999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP24;alternative_source_transcripts=ENST00000434374.1;transcript_id=HG00140_ch_T0001489;gene_id=HG00140_ch_G0000499;Parent=HG00140_ch_T0001489;transcript_name=HG00140_ch_T0001489;gene_name=USP9YP24;ID=exon:HG00140_ch_T0001489:1;Name=USP9YP24;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22718499	22720284	.	+	.	source_transcript=ENST00000434374.1;source_transcript_name=USP9YP24-201;source_gene=ENSG00000230814.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230814.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434374.1;transcript_score=299.85699999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP24;alternative_source_transcripts=ENST00000434374.1;transcript_id=HG00140_ch_T0001489;gene_id=HG00140_ch_G0000499;Parent=HG00140_ch_T0001489;transcript_name=HG00140_ch_T0001489;gene_name=USP9YP24;ID=intron:HG00140_ch_T0001489:1;Name=USP9YP24;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22720285	22720473	.	+	.	source_transcript=ENST00000434374.1;source_transcript_name=USP9YP24-201;source_gene=ENSG00000230814.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230814.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434374.1;transcript_score=299.85699999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP24;alternative_source_transcripts=ENST00000434374.1;transcript_id=HG00140_ch_T0001489;gene_id=HG00140_ch_G0000499;Parent=HG00140_ch_T0001489;transcript_name=HG00140_ch_T0001489;gene_name=USP9YP24;ID=exon:HG00140_ch_T0001489:2;Name=USP9YP24;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22720474	22722831	.	+	.	source_transcript=ENST00000434374.1;source_transcript_name=USP9YP24-201;source_gene=ENSG00000230814.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230814.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434374.1;transcript_score=299.85699999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP24;alternative_source_transcripts=ENST00000434374.1;transcript_id=HG00140_ch_T0001489;gene_id=HG00140_ch_G0000499;Parent=HG00140_ch_T0001489;transcript_name=HG00140_ch_T0001489;gene_name=USP9YP24;ID=intron:HG00140_ch_T0001489:2;Name=USP9YP24;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22722832	22722960	.	+	.	source_transcript=ENST00000434374.1;source_transcript_name=USP9YP24-201;source_gene=ENSG00000230814.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230814.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434374.1;transcript_score=299.85699999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP24;alternative_source_transcripts=ENST00000434374.1;transcript_id=HG00140_ch_T0001489;gene_id=HG00140_ch_G0000499;Parent=HG00140_ch_T0001489;transcript_name=HG00140_ch_T0001489;gene_name=USP9YP24;ID=exon:HG00140_ch_T0001489:3;Name=USP9YP24;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22722961	22724676	.	+	.	source_transcript=ENST00000434374.1;source_transcript_name=USP9YP24-201;source_gene=ENSG00000230814.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230814.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434374.1;transcript_score=299.85699999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP24;alternative_source_transcripts=ENST00000434374.1;transcript_id=HG00140_ch_T0001489;gene_id=HG00140_ch_G0000499;Parent=HG00140_ch_T0001489;transcript_name=HG00140_ch_T0001489;gene_name=USP9YP24;ID=intron:HG00140_ch_T0001489:3;Name=USP9YP24;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22724677	22724715	.	+	.	source_transcript=ENST00000434374.1;source_transcript_name=USP9YP24-201;source_gene=ENSG00000230814.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230814.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434374.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434374.1;transcript_score=299.85699999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP24;alternative_source_transcripts=ENST00000434374.1;transcript_id=HG00140_ch_T0001489;gene_id=HG00140_ch_G0000499;Parent=HG00140_ch_T0001489;transcript_name=HG00140_ch_T0001489;gene_name=USP9YP24;ID=exon:HG00140_ch_T0001489:4;Name=USP9YP24;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	22724995	22773340	.	+	.	source_gene_common_name=ENSG00000300637;source_gene=ENSG00000300637.1;gene_id=HG00140_ch_G0000500;gene_biotype=lncRNA;gene_name=ENSG00000300637;gene_sources=liftoff;ID=HG00140_ch_G0000500;Name=ENSG00000300637
HG00140_chrY	CAT	transcript	22724995	22765841	1000	+	.	source_transcript=ENST00000773078.1;source_transcript_name=ENST00000773078;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773078.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=HG00140_ch_T0001490;gene_id=HG00140_ch_G0000500;Parent=HG00140_ch_G0000500;transcript_name=HG00140_ch_T0001490;gene_name=ENSG00000300637;ID=HG00140_ch_T0001490;Name=ENSG00000300637
HG00140_chrY	CAT	exon	22724995	22725316	.	+	.	source_transcript=ENST00000773078.1;source_transcript_name=ENST00000773078;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=HG00140_ch_T0001490;gene_id=HG00140_ch_G0000500;Parent=HG00140_ch_T0001490;transcript_name=HG00140_ch_T0001490;gene_name=ENSG00000300637;ID=exon:HG00140_ch_T0001490:0;Name=ENSG00000300637;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22725317	22729880	.	+	.	source_transcript=ENST00000773078.1;source_transcript_name=ENST00000773078;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=HG00140_ch_T0001490;gene_id=HG00140_ch_G0000500;Parent=HG00140_ch_T0001490;transcript_name=HG00140_ch_T0001490;gene_name=ENSG00000300637;ID=intron:HG00140_ch_T0001490:0;Name=ENSG00000300637;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22729881	22730042	.	+	.	source_transcript=ENST00000773078.1;source_transcript_name=ENST00000773078;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=HG00140_ch_T0001490;gene_id=HG00140_ch_G0000500;Parent=HG00140_ch_T0001490;transcript_name=HG00140_ch_T0001490;gene_name=ENSG00000300637;ID=exon:HG00140_ch_T0001490:1;Name=ENSG00000300637;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22730043	22765212	.	+	.	source_transcript=ENST00000773078.1;source_transcript_name=ENST00000773078;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=HG00140_ch_T0001490;gene_id=HG00140_ch_G0000500;Parent=HG00140_ch_T0001490;transcript_name=HG00140_ch_T0001490;gene_name=ENSG00000300637;ID=intron:HG00140_ch_T0001490:1;Name=ENSG00000300637;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22765213	22765841	.	+	.	source_transcript=ENST00000773078.1;source_transcript_name=ENST00000773078;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773078.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773078.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=HG00140_ch_T0001490;gene_id=HG00140_ch_G0000500;Parent=HG00140_ch_T0001490;transcript_name=HG00140_ch_T0001490;gene_name=ENSG00000300637;ID=exon:HG00140_ch_T0001490:2;Name=ENSG00000300637;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	22725055	22773340	1000	+	.	source_transcript=ENST00000773077.1;source_transcript_name=ENST00000773077;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773077.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773077.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=HG00140_ch_T0001491;gene_id=HG00140_ch_G0000500;Parent=HG00140_ch_G0000500;transcript_name=HG00140_ch_T0001491;gene_name=ENSG00000300637;ID=HG00140_ch_T0001491;Name=ENSG00000300637
HG00140_chrY	CAT	exon	22725055	22725316	.	+	.	source_transcript=ENST00000773077.1;source_transcript_name=ENST00000773077;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773077.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773077.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=HG00140_ch_T0001491;gene_id=HG00140_ch_G0000500;Parent=HG00140_ch_T0001491;transcript_name=HG00140_ch_T0001491;gene_name=ENSG00000300637;ID=exon:HG00140_ch_T0001491:0;Name=ENSG00000300637;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22725317	22729880	.	+	.	source_transcript=ENST00000773077.1;source_transcript_name=ENST00000773077;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773077.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773077.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=HG00140_ch_T0001491;gene_id=HG00140_ch_G0000500;Parent=HG00140_ch_T0001491;transcript_name=HG00140_ch_T0001491;gene_name=ENSG00000300637;ID=intron:HG00140_ch_T0001491:0;Name=ENSG00000300637;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22729881	22730042	.	+	.	source_transcript=ENST00000773077.1;source_transcript_name=ENST00000773077;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773077.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773077.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=HG00140_ch_T0001491;gene_id=HG00140_ch_G0000500;Parent=HG00140_ch_T0001491;transcript_name=HG00140_ch_T0001491;gene_name=ENSG00000300637;ID=exon:HG00140_ch_T0001491:1;Name=ENSG00000300637;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22730043	22765212	.	+	.	source_transcript=ENST00000773077.1;source_transcript_name=ENST00000773077;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773077.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773077.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=HG00140_ch_T0001491;gene_id=HG00140_ch_G0000500;Parent=HG00140_ch_T0001491;transcript_name=HG00140_ch_T0001491;gene_name=ENSG00000300637;ID=intron:HG00140_ch_T0001491:1;Name=ENSG00000300637;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22765213	22765515	.	+	.	source_transcript=ENST00000773077.1;source_transcript_name=ENST00000773077;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773077.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773077.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=HG00140_ch_T0001491;gene_id=HG00140_ch_G0000500;Parent=HG00140_ch_T0001491;transcript_name=HG00140_ch_T0001491;gene_name=ENSG00000300637;ID=exon:HG00140_ch_T0001491:2;Name=ENSG00000300637;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22765516	22773065	.	+	.	source_transcript=ENST00000773077.1;source_transcript_name=ENST00000773077;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773077.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773077.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=HG00140_ch_T0001491;gene_id=HG00140_ch_G0000500;Parent=HG00140_ch_T0001491;transcript_name=HG00140_ch_T0001491;gene_name=ENSG00000300637;ID=intron:HG00140_ch_T0001491:2;Name=ENSG00000300637;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22773066	22773340	.	+	.	source_transcript=ENST00000773077.1;source_transcript_name=ENST00000773077;source_gene=ENSG00000300637.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300637.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773077.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773077.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300637;transcript_id=HG00140_ch_T0001491;gene_id=HG00140_ch_G0000500;Parent=HG00140_ch_T0001491;transcript_name=HG00140_ch_T0001491;gene_name=ENSG00000300637;ID=exon:HG00140_ch_T0001491:3;Name=ENSG00000300637;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	22725123	22725925	.	+	.	source_gene_common_name=HSFY7P;source_gene=ENSG00000228571.1;gene_id=HG00140_ch_G0000501;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=HSFY7P;gene_sources=liftoff;ID=HG00140_ch_G0000501;Name=HSFY7P
HG00140_chrY	CAT	transcript	22725123	22725925	1000	+	.	source_transcript=ENST00000432672.1;source_transcript_name=HSFY7P-201;source_gene=ENSG00000228571.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000228571.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432672.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432672.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY7P;transcript_id=HG00140_ch_T0001492;gene_id=HG00140_ch_G0000501;Parent=HG00140_ch_G0000501;transcript_name=HG00140_ch_T0001492;gene_name=HSFY7P;ID=HG00140_ch_T0001492;Name=HSFY7P
HG00140_chrY	CAT	exon	22725123	22725281	.	+	.	source_transcript=ENST00000432672.1;source_transcript_name=HSFY7P-201;source_gene=ENSG00000228571.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000228571.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432672.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432672.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY7P;transcript_id=HG00140_ch_T0001492;gene_id=HG00140_ch_G0000501;Parent=HG00140_ch_T0001492;transcript_name=HG00140_ch_T0001492;gene_name=HSFY7P;ID=exon:HG00140_ch_T0001492:0;Name=HSFY7P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22725282	22725766	.	+	.	source_transcript=ENST00000432672.1;source_transcript_name=HSFY7P-201;source_gene=ENSG00000228571.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000228571.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432672.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432672.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY7P;transcript_id=HG00140_ch_T0001492;gene_id=HG00140_ch_G0000501;Parent=HG00140_ch_T0001492;transcript_name=HG00140_ch_T0001492;gene_name=HSFY7P;ID=intron:HG00140_ch_T0001492:0;Name=HSFY7P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22725767	22725925	.	+	.	source_transcript=ENST00000432672.1;source_transcript_name=HSFY7P-201;source_gene=ENSG00000228571.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000228571.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000432672.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432672.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY7P;transcript_id=HG00140_ch_T0001492;gene_id=HG00140_ch_G0000501;Parent=HG00140_ch_T0001492;transcript_name=HG00140_ch_T0001492;gene_name=HSFY7P;ID=exon:HG00140_ch_T0001492:1;Name=HSFY7P;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	22742980	22746148	.	-	.	source_gene_common_name=ENSG00000295422;source_gene=ENSG00000295422.1;gene_id=HG00140_ch_G0000502;gene_biotype=lncRNA;gene_name=ENSG00000295422;gene_sources=liftoff;ID=HG00140_ch_G0000502;Name=ENSG00000295422
HG00140_chrY	CAT	transcript	22742980	22746148	1000	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG00140_ch_T0001493;gene_id=HG00140_ch_G0000502;Parent=HG00140_ch_G0000502;transcript_name=HG00140_ch_T0001493;gene_name=ENSG00000295422;ID=HG00140_ch_T0001493;Name=ENSG00000295422
HG00140_chrY	CAT	exon	22742980	22744324	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG00140_ch_T0001493;gene_id=HG00140_ch_G0000502;Parent=HG00140_ch_T0001493;transcript_name=HG00140_ch_T0001493;gene_name=ENSG00000295422;ID=exon:HG00140_ch_T0001493:0;Name=ENSG00000295422;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22744325	22745859	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG00140_ch_T0001493;gene_id=HG00140_ch_G0000502;Parent=HG00140_ch_T0001493;transcript_name=HG00140_ch_T0001493;gene_name=ENSG00000295422;ID=intron:HG00140_ch_T0001493:0;Name=ENSG00000295422;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22745860	22745920	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG00140_ch_T0001493;gene_id=HG00140_ch_G0000502;Parent=HG00140_ch_T0001493;transcript_name=HG00140_ch_T0001493;gene_name=ENSG00000295422;ID=exon:HG00140_ch_T0001493:1;Name=ENSG00000295422;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22745921	22746037	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG00140_ch_T0001493;gene_id=HG00140_ch_G0000502;Parent=HG00140_ch_T0001493;transcript_name=HG00140_ch_T0001493;gene_name=ENSG00000295422;ID=intron:HG00140_ch_T0001493:1;Name=ENSG00000295422;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22746038	22746148	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG00140_ch_T0001493;gene_id=HG00140_ch_G0000502;Parent=HG00140_ch_T0001493;transcript_name=HG00140_ch_T0001493;gene_name=ENSG00000295422;ID=exon:HG00140_ch_T0001493:2;Name=ENSG00000295422;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	22769070	22802158	.	-	.	source_gene_common_name=OFD1P9Y;source_gene=ENSG00000230476.1;alternative_source_transcripts=ENST00000417699.1;gene_id=HG00140_ch_G0000503;gene_biotype=unprocessed_pseudogene;gene_name=OFD1P9Y;gene_sources=liftoff;ID=HG00140_ch_G0000503;Name=OFD1P9Y
HG00140_chrY	CAT	transcript	22769070	22802158	1000	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG00140_ch_T0001494;gene_id=HG00140_ch_G0000503;Parent=HG00140_ch_G0000503;transcript_name=HG00140_ch_T0001494;gene_name=OFD1P9Y;ID=HG00140_ch_T0001494;Name=OFD1P9Y
HG00140_chrY	CAT	exon	22769070	22769163	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG00140_ch_T0001494;gene_id=HG00140_ch_G0000503;Parent=HG00140_ch_T0001494;transcript_name=HG00140_ch_T0001494;gene_name=OFD1P9Y;ID=exon:HG00140_ch_T0001494:0;Name=OFD1P9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22769164	22769461	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG00140_ch_T0001494;gene_id=HG00140_ch_G0000503;Parent=HG00140_ch_T0001494;transcript_name=HG00140_ch_T0001494;gene_name=OFD1P9Y;ID=intron:HG00140_ch_T0001494:0;Name=OFD1P9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22769462	22769528	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG00140_ch_T0001494;gene_id=HG00140_ch_G0000503;Parent=HG00140_ch_T0001494;transcript_name=HG00140_ch_T0001494;gene_name=OFD1P9Y;ID=exon:HG00140_ch_T0001494:1;Name=OFD1P9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22769529	22770724	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG00140_ch_T0001494;gene_id=HG00140_ch_G0000503;Parent=HG00140_ch_T0001494;transcript_name=HG00140_ch_T0001494;gene_name=OFD1P9Y;ID=intron:HG00140_ch_T0001494:1;Name=OFD1P9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22770725	22770879	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG00140_ch_T0001494;gene_id=HG00140_ch_G0000503;Parent=HG00140_ch_T0001494;transcript_name=HG00140_ch_T0001494;gene_name=OFD1P9Y;ID=exon:HG00140_ch_T0001494:2;Name=OFD1P9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22770880	22777512	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG00140_ch_T0001494;gene_id=HG00140_ch_G0000503;Parent=HG00140_ch_T0001494;transcript_name=HG00140_ch_T0001494;gene_name=OFD1P9Y;ID=intron:HG00140_ch_T0001494:2;Name=OFD1P9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22777513	22777613	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG00140_ch_T0001494;gene_id=HG00140_ch_G0000503;Parent=HG00140_ch_T0001494;transcript_name=HG00140_ch_T0001494;gene_name=OFD1P9Y;ID=exon:HG00140_ch_T0001494:3;Name=OFD1P9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22777614	22796950	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG00140_ch_T0001494;gene_id=HG00140_ch_G0000503;Parent=HG00140_ch_T0001494;transcript_name=HG00140_ch_T0001494;gene_name=OFD1P9Y;ID=intron:HG00140_ch_T0001494:3;Name=OFD1P9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22796951	22797061	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG00140_ch_T0001494;gene_id=HG00140_ch_G0000503;Parent=HG00140_ch_T0001494;transcript_name=HG00140_ch_T0001494;gene_name=OFD1P9Y;ID=exon:HG00140_ch_T0001494:4;Name=OFD1P9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22797062	22797434	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG00140_ch_T0001494;gene_id=HG00140_ch_G0000503;Parent=HG00140_ch_T0001494;transcript_name=HG00140_ch_T0001494;gene_name=OFD1P9Y;ID=intron:HG00140_ch_T0001494:4;Name=OFD1P9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22797435	22798050	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG00140_ch_T0001494;gene_id=HG00140_ch_G0000503;Parent=HG00140_ch_T0001494;transcript_name=HG00140_ch_T0001494;gene_name=OFD1P9Y;ID=exon:HG00140_ch_T0001494:5;Name=OFD1P9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22798051	22799767	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG00140_ch_T0001494;gene_id=HG00140_ch_G0000503;Parent=HG00140_ch_T0001494;transcript_name=HG00140_ch_T0001494;gene_name=OFD1P9Y;ID=intron:HG00140_ch_T0001494:5;Name=OFD1P9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22799768	22799877	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG00140_ch_T0001494;gene_id=HG00140_ch_G0000503;Parent=HG00140_ch_T0001494;transcript_name=HG00140_ch_T0001494;gene_name=OFD1P9Y;ID=exon:HG00140_ch_T0001494:6;Name=OFD1P9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22799878	22800411	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG00140_ch_T0001494;gene_id=HG00140_ch_G0000503;Parent=HG00140_ch_T0001494;transcript_name=HG00140_ch_T0001494;gene_name=OFD1P9Y;ID=intron:HG00140_ch_T0001494:6;Name=OFD1P9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22800412	22800541	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG00140_ch_T0001494;gene_id=HG00140_ch_G0000503;Parent=HG00140_ch_T0001494;transcript_name=HG00140_ch_T0001494;gene_name=OFD1P9Y;ID=exon:HG00140_ch_T0001494:7;Name=OFD1P9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22800542	22802051	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG00140_ch_T0001494;gene_id=HG00140_ch_G0000503;Parent=HG00140_ch_T0001494;transcript_name=HG00140_ch_T0001494;gene_name=OFD1P9Y;ID=intron:HG00140_ch_T0001494:7;Name=OFD1P9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22802052	22802158	.	-	.	source_transcript=ENST00000417699.1;source_transcript_name=OFD1P9Y-201;source_gene=ENSG00000230476.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230476.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417699.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P9Y;alternative_source_transcripts=ENST00000417699.1;transcript_id=HG00140_ch_T0001494;gene_id=HG00140_ch_G0000503;Parent=HG00140_ch_T0001494;transcript_name=HG00140_ch_T0001494;gene_name=OFD1P9Y;ID=exon:HG00140_ch_T0001494:8;Name=OFD1P9Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	22823653	22829101	.	+	.	source_gene_common_name=ENSG00000299625;source_gene=ENSG00000299625.1_1;gene_id=HG00140_ch_G0000504;gene_biotype=lncRNA;gene_name=ENSG00000299625;gene_sources=liftoff;ID=HG00140_ch_G0000504;Name=ENSG00000299625
HG00140_chrY	CAT	transcript	22823653	22829095	1000	+	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG00140_ch_T0001495;gene_id=HG00140_ch_G0000504;Parent=HG00140_ch_G0000504;transcript_name=HG00140_ch_T0001495;gene_name=ENSG00000299625;ID=HG00140_ch_T0001495;Name=ENSG00000299625
HG00140_chrY	CAT	exon	22823653	22823992	.	+	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG00140_ch_T0001495;gene_id=HG00140_ch_G0000504;Parent=HG00140_ch_T0001495;transcript_name=HG00140_ch_T0001495;gene_name=ENSG00000299625;ID=exon:HG00140_ch_T0001495:0;Name=ENSG00000299625;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22823993	22827904	.	+	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG00140_ch_T0001495;gene_id=HG00140_ch_G0000504;Parent=HG00140_ch_T0001495;transcript_name=HG00140_ch_T0001495;gene_name=ENSG00000299625;ID=intron:HG00140_ch_T0001495:0;Name=ENSG00000299625;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22827905	22828031	.	+	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG00140_ch_T0001495;gene_id=HG00140_ch_G0000504;Parent=HG00140_ch_T0001495;transcript_name=HG00140_ch_T0001495;gene_name=ENSG00000299625;ID=exon:HG00140_ch_T0001495:1;Name=ENSG00000299625;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22828032	22828395	.	+	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG00140_ch_T0001495;gene_id=HG00140_ch_G0000504;Parent=HG00140_ch_T0001495;transcript_name=HG00140_ch_T0001495;gene_name=ENSG00000299625;ID=intron:HG00140_ch_T0001495:1;Name=ENSG00000299625;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22828396	22829095	.	+	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG00140_ch_T0001495;gene_id=HG00140_ch_G0000504;Parent=HG00140_ch_T0001495;transcript_name=HG00140_ch_T0001495;gene_name=ENSG00000299625;ID=exon:HG00140_ch_T0001495:2;Name=ENSG00000299625;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	22823654	22829101	1000	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG00140_ch_T0001496;gene_id=HG00140_ch_G0000504;Parent=HG00140_ch_G0000504;transcript_name=HG00140_ch_T0001496;gene_name=ENSG00000299625;ID=HG00140_ch_T0001496;Name=ENSG00000299625
HG00140_chrY	CAT	exon	22823654	22823992	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG00140_ch_T0001496;gene_id=HG00140_ch_G0000504;Parent=HG00140_ch_T0001496;transcript_name=HG00140_ch_T0001496;gene_name=ENSG00000299625;ID=exon:HG00140_ch_T0001496:0;Name=ENSG00000299625;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22823993	22825901	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG00140_ch_T0001496;gene_id=HG00140_ch_G0000504;Parent=HG00140_ch_T0001496;transcript_name=HG00140_ch_T0001496;gene_name=ENSG00000299625;ID=intron:HG00140_ch_T0001496:0;Name=ENSG00000299625;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22825902	22826035	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG00140_ch_T0001496;gene_id=HG00140_ch_G0000504;Parent=HG00140_ch_T0001496;transcript_name=HG00140_ch_T0001496;gene_name=ENSG00000299625;ID=exon:HG00140_ch_T0001496:1;Name=ENSG00000299625;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22826036	22827904	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG00140_ch_T0001496;gene_id=HG00140_ch_G0000504;Parent=HG00140_ch_T0001496;transcript_name=HG00140_ch_T0001496;gene_name=ENSG00000299625;ID=intron:HG00140_ch_T0001496:1;Name=ENSG00000299625;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22827905	22828031	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG00140_ch_T0001496;gene_id=HG00140_ch_G0000504;Parent=HG00140_ch_T0001496;transcript_name=HG00140_ch_T0001496;gene_name=ENSG00000299625;ID=exon:HG00140_ch_T0001496:2;Name=ENSG00000299625;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22828032	22828395	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG00140_ch_T0001496;gene_id=HG00140_ch_G0000504;Parent=HG00140_ch_T0001496;transcript_name=HG00140_ch_T0001496;gene_name=ENSG00000299625;ID=intron:HG00140_ch_T0001496:2;Name=ENSG00000299625;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22828396	22829101	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1_1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1_1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG00140_ch_T0001496;gene_id=HG00140_ch_G0000504;Parent=HG00140_ch_T0001496;transcript_name=HG00140_ch_T0001496;gene_name=ENSG00000299625;ID=exon:HG00140_ch_T0001496:3;Name=ENSG00000299625;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	22834104	22834400	.	-	.	source_gene_common_name=ENSG00000273589;source_gene=ENSG00000273589.1;alternative_source_transcripts=ENST00000612840.1;gene_id=HG00140_ch_G0000505;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000273589;gene_sources=liftoff;ID=HG00140_ch_G0000505;Name=ENSG00000273589
HG00140_chrY	CAT	transcript	22834104	22834400	1000	-	.	source_transcript=ENST00000612840.1;source_transcript_name=ENST00000612840;source_gene=ENSG00000273589.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000273589.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000612840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000612840.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273589;alternative_source_transcripts=ENST00000612840.1;transcript_id=HG00140_ch_T0001497;gene_id=HG00140_ch_G0000505;Parent=HG00140_ch_G0000505;transcript_name=HG00140_ch_T0001497;gene_name=ENSG00000273589;ID=HG00140_ch_T0001497;Name=ENSG00000273589
HG00140_chrY	CAT	exon	22834104	22834400	.	-	.	source_transcript=ENST00000612840.1;source_transcript_name=ENST00000612840;source_gene=ENSG00000273589.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000273589.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000612840.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000612840.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000273589;alternative_source_transcripts=ENST00000612840.1;transcript_id=HG00140_ch_T0001497;gene_id=HG00140_ch_G0000505;Parent=HG00140_ch_T0001497;transcript_name=HG00140_ch_T0001497;gene_name=ENSG00000273589;ID=exon:HG00140_ch_T0001497:0;Name=ENSG00000273589;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	22835312	22843795	.	+	.	source_gene_common_name=ENSG00000290348;source_gene=ENSG00000290348.2;gene_id=HG00140_ch_G0000506;gene_biotype=lncRNA;gene_name=ENSG00000290348;gene_sources=liftoff;ID=HG00140_ch_G0000506;Name=ENSG00000290348
HG00140_chrY	CAT	transcript	22835312	22843795	1000	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG00140_ch_T0001498;gene_id=HG00140_ch_G0000506;Parent=HG00140_ch_G0000506;transcript_name=HG00140_ch_T0001498;gene_name=ENSG00000290348;ID=HG00140_ch_T0001498;Name=ENSG00000290348
HG00140_chrY	CAT	exon	22835312	22835465	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG00140_ch_T0001498;gene_id=HG00140_ch_G0000506;Parent=HG00140_ch_T0001498;transcript_name=HG00140_ch_T0001498;gene_name=ENSG00000290348;ID=exon:HG00140_ch_T0001498:0;Name=ENSG00000290348;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22835466	22836219	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG00140_ch_T0001498;gene_id=HG00140_ch_G0000506;Parent=HG00140_ch_T0001498;transcript_name=HG00140_ch_T0001498;gene_name=ENSG00000290348;ID=intron:HG00140_ch_T0001498:0;Name=ENSG00000290348;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22836220	22836299	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG00140_ch_T0001498;gene_id=HG00140_ch_G0000506;Parent=HG00140_ch_T0001498;transcript_name=HG00140_ch_T0001498;gene_name=ENSG00000290348;ID=exon:HG00140_ch_T0001498:1;Name=ENSG00000290348;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22836300	22837313	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG00140_ch_T0001498;gene_id=HG00140_ch_G0000506;Parent=HG00140_ch_T0001498;transcript_name=HG00140_ch_T0001498;gene_name=ENSG00000290348;ID=intron:HG00140_ch_T0001498:1;Name=ENSG00000290348;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22837314	22837426	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG00140_ch_T0001498;gene_id=HG00140_ch_G0000506;Parent=HG00140_ch_T0001498;transcript_name=HG00140_ch_T0001498;gene_name=ENSG00000290348;ID=exon:HG00140_ch_T0001498:2;Name=ENSG00000290348;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22837427	22837879	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG00140_ch_T0001498;gene_id=HG00140_ch_G0000506;Parent=HG00140_ch_T0001498;transcript_name=HG00140_ch_T0001498;gene_name=ENSG00000290348;ID=intron:HG00140_ch_T0001498:2;Name=ENSG00000290348;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22837880	22837983	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG00140_ch_T0001498;gene_id=HG00140_ch_G0000506;Parent=HG00140_ch_T0001498;transcript_name=HG00140_ch_T0001498;gene_name=ENSG00000290348;ID=exon:HG00140_ch_T0001498:3;Name=ENSG00000290348;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22837984	22840691	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG00140_ch_T0001498;gene_id=HG00140_ch_G0000506;Parent=HG00140_ch_T0001498;transcript_name=HG00140_ch_T0001498;gene_name=ENSG00000290348;ID=intron:HG00140_ch_T0001498:3;Name=ENSG00000290348;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22840692	22840869	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG00140_ch_T0001498;gene_id=HG00140_ch_G0000506;Parent=HG00140_ch_T0001498;transcript_name=HG00140_ch_T0001498;gene_name=ENSG00000290348;ID=exon:HG00140_ch_T0001498:4;Name=ENSG00000290348;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22840870	22842804	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG00140_ch_T0001498;gene_id=HG00140_ch_G0000506;Parent=HG00140_ch_T0001498;transcript_name=HG00140_ch_T0001498;gene_name=ENSG00000290348;ID=intron:HG00140_ch_T0001498:4;Name=ENSG00000290348;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22842805	22842957	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG00140_ch_T0001498;gene_id=HG00140_ch_G0000506;Parent=HG00140_ch_T0001498;transcript_name=HG00140_ch_T0001498;gene_name=ENSG00000290348;ID=exon:HG00140_ch_T0001498:5;Name=ENSG00000290348;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22842958	22843535	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG00140_ch_T0001498;gene_id=HG00140_ch_G0000506;Parent=HG00140_ch_T0001498;transcript_name=HG00140_ch_T0001498;gene_name=ENSG00000290348;ID=intron:HG00140_ch_T0001498:5;Name=ENSG00000290348;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22843536	22843795	.	+	.	source_transcript=ENST00000400578.3;source_transcript_name=ENST00000400578;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400578.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400578.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG00140_ch_T0001498;gene_id=HG00140_ch_G0000506;Parent=HG00140_ch_T0001498;transcript_name=HG00140_ch_T0001498;gene_name=ENSG00000290348;ID=exon:HG00140_ch_T0001498:6;Name=ENSG00000290348;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	22835344	22843795	1000	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG00140_ch_T0001499;gene_id=HG00140_ch_G0000506;Parent=HG00140_ch_G0000506;transcript_name=HG00140_ch_T0001499;gene_name=ENSG00000290348;ID=HG00140_ch_T0001499;Name=ENSG00000290348
HG00140_chrY	CAT	exon	22835344	22835465	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG00140_ch_T0001499;gene_id=HG00140_ch_G0000506;Parent=HG00140_ch_T0001499;transcript_name=HG00140_ch_T0001499;gene_name=ENSG00000290348;ID=exon:HG00140_ch_T0001499:0;Name=ENSG00000290348;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22835466	22836116	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG00140_ch_T0001499;gene_id=HG00140_ch_G0000506;Parent=HG00140_ch_T0001499;transcript_name=HG00140_ch_T0001499;gene_name=ENSG00000290348;ID=intron:HG00140_ch_T0001499:0;Name=ENSG00000290348;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22836117	22836299	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG00140_ch_T0001499;gene_id=HG00140_ch_G0000506;Parent=HG00140_ch_T0001499;transcript_name=HG00140_ch_T0001499;gene_name=ENSG00000290348;ID=exon:HG00140_ch_T0001499:1;Name=ENSG00000290348;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22836300	22837313	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG00140_ch_T0001499;gene_id=HG00140_ch_G0000506;Parent=HG00140_ch_T0001499;transcript_name=HG00140_ch_T0001499;gene_name=ENSG00000290348;ID=intron:HG00140_ch_T0001499:1;Name=ENSG00000290348;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22837314	22837426	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG00140_ch_T0001499;gene_id=HG00140_ch_G0000506;Parent=HG00140_ch_T0001499;transcript_name=HG00140_ch_T0001499;gene_name=ENSG00000290348;ID=exon:HG00140_ch_T0001499:2;Name=ENSG00000290348;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22837427	22837879	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG00140_ch_T0001499;gene_id=HG00140_ch_G0000506;Parent=HG00140_ch_T0001499;transcript_name=HG00140_ch_T0001499;gene_name=ENSG00000290348;ID=intron:HG00140_ch_T0001499:2;Name=ENSG00000290348;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22837880	22837983	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG00140_ch_T0001499;gene_id=HG00140_ch_G0000506;Parent=HG00140_ch_T0001499;transcript_name=HG00140_ch_T0001499;gene_name=ENSG00000290348;ID=exon:HG00140_ch_T0001499:3;Name=ENSG00000290348;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22837984	22840691	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG00140_ch_T0001499;gene_id=HG00140_ch_G0000506;Parent=HG00140_ch_T0001499;transcript_name=HG00140_ch_T0001499;gene_name=ENSG00000290348;ID=intron:HG00140_ch_T0001499:3;Name=ENSG00000290348;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22840692	22840869	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG00140_ch_T0001499;gene_id=HG00140_ch_G0000506;Parent=HG00140_ch_T0001499;transcript_name=HG00140_ch_T0001499;gene_name=ENSG00000290348;ID=exon:HG00140_ch_T0001499:4;Name=ENSG00000290348;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22840870	22842804	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG00140_ch_T0001499;gene_id=HG00140_ch_G0000506;Parent=HG00140_ch_T0001499;transcript_name=HG00140_ch_T0001499;gene_name=ENSG00000290348;ID=intron:HG00140_ch_T0001499:4;Name=ENSG00000290348;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22842805	22842957	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG00140_ch_T0001499;gene_id=HG00140_ch_G0000506;Parent=HG00140_ch_T0001499;transcript_name=HG00140_ch_T0001499;gene_name=ENSG00000290348;ID=exon:HG00140_ch_T0001499:5;Name=ENSG00000290348;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22842958	22843535	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG00140_ch_T0001499;gene_id=HG00140_ch_G0000506;Parent=HG00140_ch_T0001499;transcript_name=HG00140_ch_T0001499;gene_name=ENSG00000290348;ID=intron:HG00140_ch_T0001499:5;Name=ENSG00000290348;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22843536	22843795	.	+	.	source_transcript=ENST00000726065.1;source_transcript_name=ENST00000726065;source_gene=ENSG00000290348.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290348.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000726065.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000726065.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000290348;transcript_id=HG00140_ch_T0001499;gene_id=HG00140_ch_G0000506;Parent=HG00140_ch_T0001499;transcript_name=HG00140_ch_T0001499;gene_name=ENSG00000290348;ID=exon:HG00140_ch_T0001499:6;Name=ENSG00000290348;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	22837318	22846951	.	+	.	source_gene_common_name=RBMY2BP;source_gene=ENSG00000224657.10;gene_id=HG00140_ch_G0000507;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY2BP;gene_sources=liftoff;ID=HG00140_ch_G0000507;Name=RBMY2BP
HG00140_chrY	CAT	transcript	22837318	22846951	1000	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=HG00140_ch_T0001500;gene_id=HG00140_ch_G0000507;Parent=HG00140_ch_G0000507;transcript_name=HG00140_ch_T0001500;gene_name=RBMY2BP;ID=HG00140_ch_T0001500;Name=RBMY2BP
HG00140_chrY	CAT	exon	22837318	22837426	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=HG00140_ch_T0001500;gene_id=HG00140_ch_G0000507;Parent=HG00140_ch_T0001500;transcript_name=HG00140_ch_T0001500;gene_name=RBMY2BP;ID=exon:HG00140_ch_T0001500:0;Name=RBMY2BP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22837427	22837879	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=HG00140_ch_T0001500;gene_id=HG00140_ch_G0000507;Parent=HG00140_ch_T0001500;transcript_name=HG00140_ch_T0001500;gene_name=RBMY2BP;ID=intron:HG00140_ch_T0001500:0;Name=RBMY2BP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22837880	22837983	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=HG00140_ch_T0001500;gene_id=HG00140_ch_G0000507;Parent=HG00140_ch_T0001500;transcript_name=HG00140_ch_T0001500;gene_name=RBMY2BP;ID=exon:HG00140_ch_T0001500:1;Name=RBMY2BP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22837984	22840691	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=HG00140_ch_T0001500;gene_id=HG00140_ch_G0000507;Parent=HG00140_ch_T0001500;transcript_name=HG00140_ch_T0001500;gene_name=RBMY2BP;ID=intron:HG00140_ch_T0001500:1;Name=RBMY2BP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22840692	22840869	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=HG00140_ch_T0001500;gene_id=HG00140_ch_G0000507;Parent=HG00140_ch_T0001500;transcript_name=HG00140_ch_T0001500;gene_name=RBMY2BP;ID=exon:HG00140_ch_T0001500:2;Name=RBMY2BP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22840870	22842804	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=HG00140_ch_T0001500;gene_id=HG00140_ch_G0000507;Parent=HG00140_ch_T0001500;transcript_name=HG00140_ch_T0001500;gene_name=RBMY2BP;ID=intron:HG00140_ch_T0001500:2;Name=RBMY2BP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22842805	22842957	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=HG00140_ch_T0001500;gene_id=HG00140_ch_G0000507;Parent=HG00140_ch_T0001500;transcript_name=HG00140_ch_T0001500;gene_name=RBMY2BP;ID=exon:HG00140_ch_T0001500:3;Name=RBMY2BP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22842958	22844964	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=HG00140_ch_T0001500;gene_id=HG00140_ch_G0000507;Parent=HG00140_ch_T0001500;transcript_name=HG00140_ch_T0001500;gene_name=RBMY2BP;ID=intron:HG00140_ch_T0001500:3;Name=RBMY2BP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22844965	22845079	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=HG00140_ch_T0001500;gene_id=HG00140_ch_G0000507;Parent=HG00140_ch_T0001500;transcript_name=HG00140_ch_T0001500;gene_name=RBMY2BP;ID=exon:HG00140_ch_T0001500:4;Name=RBMY2BP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22845080	22845948	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=HG00140_ch_T0001500;gene_id=HG00140_ch_G0000507;Parent=HG00140_ch_T0001500;transcript_name=HG00140_ch_T0001500;gene_name=RBMY2BP;ID=intron:HG00140_ch_T0001500:4;Name=RBMY2BP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22845949	22846059	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=HG00140_ch_T0001500;gene_id=HG00140_ch_G0000507;Parent=HG00140_ch_T0001500;transcript_name=HG00140_ch_T0001500;gene_name=RBMY2BP;ID=exon:HG00140_ch_T0001500:5;Name=RBMY2BP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22846060	22846141	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=HG00140_ch_T0001500;gene_id=HG00140_ch_G0000507;Parent=HG00140_ch_T0001500;transcript_name=HG00140_ch_T0001500;gene_name=RBMY2BP;ID=intron:HG00140_ch_T0001500:5;Name=RBMY2BP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22846142	22846229	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=HG00140_ch_T0001500;gene_id=HG00140_ch_G0000507;Parent=HG00140_ch_T0001500;transcript_name=HG00140_ch_T0001500;gene_name=RBMY2BP;ID=exon:HG00140_ch_T0001500:6;Name=RBMY2BP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22846230	22846653	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=HG00140_ch_T0001500;gene_id=HG00140_ch_G0000507;Parent=HG00140_ch_T0001500;transcript_name=HG00140_ch_T0001500;gene_name=RBMY2BP;ID=intron:HG00140_ch_T0001500:6;Name=RBMY2BP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22846654	22846951	.	+	.	source_transcript=ENST00000451071.5;source_transcript_name=RBMY2BP-201;source_gene=ENSG00000224657.10;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000224657.10;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000451071.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000451071.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2BP;transcript_id=HG00140_ch_T0001500;gene_id=HG00140_ch_G0000507;Parent=HG00140_ch_T0001500;transcript_name=HG00140_ch_T0001500;gene_name=RBMY2BP;ID=exon:HG00140_ch_T0001500:7;Name=RBMY2BP;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	22858696	22860939	.	-	.	source_gene_common_name=ENSG00000224917;source_gene=ENSG00000224917.1;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;gene_id=HG00140_ch_G0000508;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000224917;gene_sources=liftoff;ID=HG00140_ch_G0000508;Name=ENSG00000224917
HG00140_chrY	CAT	transcript	22858696	22860939	1000	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;transcript_id=HG00140_ch_T0001501;gene_id=HG00140_ch_G0000508;Parent=HG00140_ch_G0000508;transcript_name=HG00140_ch_T0001501;gene_name=ENSG00000224917;ID=HG00140_ch_T0001501;Name=ENSG00000224917
HG00140_chrY	CAT	exon	22858696	22858769	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;transcript_id=HG00140_ch_T0001501;gene_id=HG00140_ch_G0000508;Parent=HG00140_ch_T0001501;transcript_name=HG00140_ch_T0001501;gene_name=ENSG00000224917;ID=exon:HG00140_ch_T0001501:0;Name=ENSG00000224917;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22858770	22858890	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;transcript_id=HG00140_ch_T0001501;gene_id=HG00140_ch_G0000508;Parent=HG00140_ch_T0001501;transcript_name=HG00140_ch_T0001501;gene_name=ENSG00000224917;ID=intron:HG00140_ch_T0001501:0;Name=ENSG00000224917;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22858891	22858950	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;transcript_id=HG00140_ch_T0001501;gene_id=HG00140_ch_G0000508;Parent=HG00140_ch_T0001501;transcript_name=HG00140_ch_T0001501;gene_name=ENSG00000224917;ID=exon:HG00140_ch_T0001501:1;Name=ENSG00000224917;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22858951	22859126	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;transcript_id=HG00140_ch_T0001501;gene_id=HG00140_ch_G0000508;Parent=HG00140_ch_T0001501;transcript_name=HG00140_ch_T0001501;gene_name=ENSG00000224917;ID=intron:HG00140_ch_T0001501:1;Name=ENSG00000224917;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22859127	22859235	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;transcript_id=HG00140_ch_T0001501;gene_id=HG00140_ch_G0000508;Parent=HG00140_ch_T0001501;transcript_name=HG00140_ch_T0001501;gene_name=ENSG00000224917;ID=exon:HG00140_ch_T0001501:2;Name=ENSG00000224917;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22859236	22859450	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;transcript_id=HG00140_ch_T0001501;gene_id=HG00140_ch_G0000508;Parent=HG00140_ch_T0001501;transcript_name=HG00140_ch_T0001501;gene_name=ENSG00000224917;ID=intron:HG00140_ch_T0001501:2;Name=ENSG00000224917;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22859451	22859505	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;transcript_id=HG00140_ch_T0001501;gene_id=HG00140_ch_G0000508;Parent=HG00140_ch_T0001501;transcript_name=HG00140_ch_T0001501;gene_name=ENSG00000224917;ID=exon:HG00140_ch_T0001501:3;Name=ENSG00000224917;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22859506	22860537	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;transcript_id=HG00140_ch_T0001501;gene_id=HG00140_ch_G0000508;Parent=HG00140_ch_T0001501;transcript_name=HG00140_ch_T0001501;gene_name=ENSG00000224917;ID=intron:HG00140_ch_T0001501:3;Name=ENSG00000224917;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22860538	22860939	.	-	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;alternative_source_transcripts=ENST00000434179.1,ENST00000434179.1;transcript_id=HG00140_ch_T0001501;gene_id=HG00140_ch_G0000508;Parent=HG00140_ch_T0001501;transcript_name=HG00140_ch_T0001501;gene_name=ENSG00000224917;ID=exon:HG00140_ch_T0001501:4;Name=ENSG00000224917;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	22882015	22960238	.	-	.	source_gene_common_name=ENSG00000306918;source_gene=ENSG00000306918.1;gene_id=HG00140_ch_G0000509;gene_biotype=lncRNA;gene_name=ENSG00000306918;gene_sources=liftoff;ID=HG00140_ch_G0000509;Name=ENSG00000306918
HG00140_chrY	CAT	transcript	22882015	22960222	1000	-	.	source_transcript=ENST00000821993.1;source_transcript_name=ENST00000821993;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821993.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG00140_ch_T0001502;gene_id=HG00140_ch_G0000509;Parent=HG00140_ch_G0000509;transcript_name=HG00140_ch_T0001502;gene_name=ENSG00000306918;ID=HG00140_ch_T0001502;Name=ENSG00000306918
HG00140_chrY	CAT	exon	22882015	22882297	.	-	.	source_transcript=ENST00000821993.1;source_transcript_name=ENST00000821993;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG00140_ch_T0001502;gene_id=HG00140_ch_G0000509;Parent=HG00140_ch_T0001502;transcript_name=HG00140_ch_T0001502;gene_name=ENSG00000306918;ID=exon:HG00140_ch_T0001502:0;Name=ENSG00000306918;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22882298	22883917	.	-	.	source_transcript=ENST00000821993.1;source_transcript_name=ENST00000821993;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG00140_ch_T0001502;gene_id=HG00140_ch_G0000509;Parent=HG00140_ch_T0001502;transcript_name=HG00140_ch_T0001502;gene_name=ENSG00000306918;ID=intron:HG00140_ch_T0001502:0;Name=ENSG00000306918;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22883918	22883961	.	-	.	source_transcript=ENST00000821993.1;source_transcript_name=ENST00000821993;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG00140_ch_T0001502;gene_id=HG00140_ch_G0000509;Parent=HG00140_ch_T0001502;transcript_name=HG00140_ch_T0001502;gene_name=ENSG00000306918;ID=exon:HG00140_ch_T0001502:1;Name=ENSG00000306918;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22883962	22948390	.	-	.	source_transcript=ENST00000821993.1;source_transcript_name=ENST00000821993;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG00140_ch_T0001502;gene_id=HG00140_ch_G0000509;Parent=HG00140_ch_T0001502;transcript_name=HG00140_ch_T0001502;gene_name=ENSG00000306918;ID=intron:HG00140_ch_T0001502:1;Name=ENSG00000306918;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22948391	22948498	.	-	.	source_transcript=ENST00000821993.1;source_transcript_name=ENST00000821993;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG00140_ch_T0001502;gene_id=HG00140_ch_G0000509;Parent=HG00140_ch_T0001502;transcript_name=HG00140_ch_T0001502;gene_name=ENSG00000306918;ID=exon:HG00140_ch_T0001502:2;Name=ENSG00000306918;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22948499	22951645	.	-	.	source_transcript=ENST00000821993.1;source_transcript_name=ENST00000821993;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG00140_ch_T0001502;gene_id=HG00140_ch_G0000509;Parent=HG00140_ch_T0001502;transcript_name=HG00140_ch_T0001502;gene_name=ENSG00000306918;ID=intron:HG00140_ch_T0001502:2;Name=ENSG00000306918;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22951646	22951734	.	-	.	source_transcript=ENST00000821993.1;source_transcript_name=ENST00000821993;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG00140_ch_T0001502;gene_id=HG00140_ch_G0000509;Parent=HG00140_ch_T0001502;transcript_name=HG00140_ch_T0001502;gene_name=ENSG00000306918;ID=exon:HG00140_ch_T0001502:3;Name=ENSG00000306918;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22951735	22960123	.	-	.	source_transcript=ENST00000821993.1;source_transcript_name=ENST00000821993;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG00140_ch_T0001502;gene_id=HG00140_ch_G0000509;Parent=HG00140_ch_T0001502;transcript_name=HG00140_ch_T0001502;gene_name=ENSG00000306918;ID=intron:HG00140_ch_T0001502:3;Name=ENSG00000306918;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22960124	22960222	.	-	.	source_transcript=ENST00000821993.1;source_transcript_name=ENST00000821993;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821993.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821993.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG00140_ch_T0001502;gene_id=HG00140_ch_G0000509;Parent=HG00140_ch_T0001502;transcript_name=HG00140_ch_T0001502;gene_name=ENSG00000306918;ID=exon:HG00140_ch_T0001502:4;Name=ENSG00000306918;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	22917194	22960238	1000	-	.	source_transcript=ENST00000821994.1;source_transcript_name=ENST00000821994;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821994.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG00140_ch_T0001503;gene_id=HG00140_ch_G0000509;Parent=HG00140_ch_G0000509;transcript_name=HG00140_ch_T0001503;gene_name=ENSG00000306918;ID=HG00140_ch_T0001503;Name=ENSG00000306918
HG00140_chrY	CAT	exon	22917194	22917590	.	-	.	source_transcript=ENST00000821994.1;source_transcript_name=ENST00000821994;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821994.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG00140_ch_T0001503;gene_id=HG00140_ch_G0000509;Parent=HG00140_ch_T0001503;transcript_name=HG00140_ch_T0001503;gene_name=ENSG00000306918;ID=exon:HG00140_ch_T0001503:0;Name=ENSG00000306918;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22917591	22948390	.	-	.	source_transcript=ENST00000821994.1;source_transcript_name=ENST00000821994;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821994.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG00140_ch_T0001503;gene_id=HG00140_ch_G0000509;Parent=HG00140_ch_T0001503;transcript_name=HG00140_ch_T0001503;gene_name=ENSG00000306918;ID=intron:HG00140_ch_T0001503:0;Name=ENSG00000306918;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22948391	22948498	.	-	.	source_transcript=ENST00000821994.1;source_transcript_name=ENST00000821994;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821994.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG00140_ch_T0001503;gene_id=HG00140_ch_G0000509;Parent=HG00140_ch_T0001503;transcript_name=HG00140_ch_T0001503;gene_name=ENSG00000306918;ID=exon:HG00140_ch_T0001503:1;Name=ENSG00000306918;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22948499	22960123	.	-	.	source_transcript=ENST00000821994.1;source_transcript_name=ENST00000821994;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821994.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG00140_ch_T0001503;gene_id=HG00140_ch_G0000509;Parent=HG00140_ch_T0001503;transcript_name=HG00140_ch_T0001503;gene_name=ENSG00000306918;ID=intron:HG00140_ch_T0001503:1;Name=ENSG00000306918;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22960124	22960238	.	-	.	source_transcript=ENST00000821994.1;source_transcript_name=ENST00000821994;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821994.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821994.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG00140_ch_T0001503;gene_id=HG00140_ch_G0000509;Parent=HG00140_ch_T0001503;transcript_name=HG00140_ch_T0001503;gene_name=ENSG00000306918;ID=exon:HG00140_ch_T0001503:2;Name=ENSG00000306918;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	22917194	22960220	1000	-	.	source_transcript=ENST00000821995.1;source_transcript_name=ENST00000821995;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821995.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG00140_ch_T0001504;gene_id=HG00140_ch_G0000509;Parent=HG00140_ch_G0000509;transcript_name=HG00140_ch_T0001504;gene_name=ENSG00000306918;ID=HG00140_ch_T0001504;Name=ENSG00000306918
HG00140_chrY	CAT	exon	22917194	22917590	.	-	.	source_transcript=ENST00000821995.1;source_transcript_name=ENST00000821995;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG00140_ch_T0001504;gene_id=HG00140_ch_G0000509;Parent=HG00140_ch_T0001504;transcript_name=HG00140_ch_T0001504;gene_name=ENSG00000306918;ID=exon:HG00140_ch_T0001504:0;Name=ENSG00000306918;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22917591	22948390	.	-	.	source_transcript=ENST00000821995.1;source_transcript_name=ENST00000821995;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG00140_ch_T0001504;gene_id=HG00140_ch_G0000509;Parent=HG00140_ch_T0001504;transcript_name=HG00140_ch_T0001504;gene_name=ENSG00000306918;ID=intron:HG00140_ch_T0001504:0;Name=ENSG00000306918;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22948391	22948498	.	-	.	source_transcript=ENST00000821995.1;source_transcript_name=ENST00000821995;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG00140_ch_T0001504;gene_id=HG00140_ch_G0000509;Parent=HG00140_ch_T0001504;transcript_name=HG00140_ch_T0001504;gene_name=ENSG00000306918;ID=exon:HG00140_ch_T0001504:1;Name=ENSG00000306918;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22948499	22951645	.	-	.	source_transcript=ENST00000821995.1;source_transcript_name=ENST00000821995;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG00140_ch_T0001504;gene_id=HG00140_ch_G0000509;Parent=HG00140_ch_T0001504;transcript_name=HG00140_ch_T0001504;gene_name=ENSG00000306918;ID=intron:HG00140_ch_T0001504:1;Name=ENSG00000306918;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22951646	22951734	.	-	.	source_transcript=ENST00000821995.1;source_transcript_name=ENST00000821995;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG00140_ch_T0001504;gene_id=HG00140_ch_G0000509;Parent=HG00140_ch_T0001504;transcript_name=HG00140_ch_T0001504;gene_name=ENSG00000306918;ID=exon:HG00140_ch_T0001504:2;Name=ENSG00000306918;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22951735	22960123	.	-	.	source_transcript=ENST00000821995.1;source_transcript_name=ENST00000821995;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG00140_ch_T0001504;gene_id=HG00140_ch_G0000509;Parent=HG00140_ch_T0001504;transcript_name=HG00140_ch_T0001504;gene_name=ENSG00000306918;ID=intron:HG00140_ch_T0001504:2;Name=ENSG00000306918;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22960124	22960220	.	-	.	source_transcript=ENST00000821995.1;source_transcript_name=ENST00000821995;source_gene=ENSG00000306918.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306918.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000821995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000821995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306918;transcript_id=HG00140_ch_T0001504;gene_id=HG00140_ch_G0000509;Parent=HG00140_ch_T0001504;transcript_name=HG00140_ch_T0001504;gene_name=ENSG00000306918;ID=exon:HG00140_ch_T0001504:3;Name=ENSG00000306918;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	22950931	22957881	.	-	.	source_gene_common_name=RBMY2WP;source_gene=ENSG00000230727.1;gene_id=HG00140_ch_G0000510;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=RBMY2WP;gene_sources=liftoff;ID=HG00140_ch_G0000510;Name=RBMY2WP
HG00140_chrY	CAT	transcript	22950931	22957881	1000	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=HG00140_ch_T0001505;gene_id=HG00140_ch_G0000510;Parent=HG00140_ch_G0000510;transcript_name=HG00140_ch_T0001505;gene_name=RBMY2WP;ID=HG00140_ch_T0001505;Name=RBMY2WP
HG00140_chrY	CAT	exon	22950931	22951232	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=HG00140_ch_T0001505;gene_id=HG00140_ch_G0000510;Parent=HG00140_ch_T0001505;transcript_name=HG00140_ch_T0001505;gene_name=RBMY2WP;ID=exon:HG00140_ch_T0001505:0;Name=RBMY2WP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22951233	22951645	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=HG00140_ch_T0001505;gene_id=HG00140_ch_G0000510;Parent=HG00140_ch_T0001505;transcript_name=HG00140_ch_T0001505;gene_name=RBMY2WP;ID=intron:HG00140_ch_T0001505:0;Name=RBMY2WP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22951646	22951734	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=HG00140_ch_T0001505;gene_id=HG00140_ch_G0000510;Parent=HG00140_ch_T0001505;transcript_name=HG00140_ch_T0001505;gene_name=RBMY2WP;ID=exon:HG00140_ch_T0001505:1;Name=RBMY2WP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22951735	22951815	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=HG00140_ch_T0001505;gene_id=HG00140_ch_G0000510;Parent=HG00140_ch_T0001505;transcript_name=HG00140_ch_T0001505;gene_name=RBMY2WP;ID=intron:HG00140_ch_T0001505:1;Name=RBMY2WP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22951816	22951926	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=HG00140_ch_T0001505;gene_id=HG00140_ch_G0000510;Parent=HG00140_ch_T0001505;transcript_name=HG00140_ch_T0001505;gene_name=RBMY2WP;ID=exon:HG00140_ch_T0001505:2;Name=RBMY2WP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22951927	22954691	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=HG00140_ch_T0001505;gene_id=HG00140_ch_G0000510;Parent=HG00140_ch_T0001505;transcript_name=HG00140_ch_T0001505;gene_name=RBMY2WP;ID=intron:HG00140_ch_T0001505:2;Name=RBMY2WP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22954692	22954868	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=HG00140_ch_T0001505;gene_id=HG00140_ch_G0000510;Parent=HG00140_ch_T0001505;transcript_name=HG00140_ch_T0001505;gene_name=RBMY2WP;ID=exon:HG00140_ch_T0001505:3;Name=RBMY2WP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22954869	22957256	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=HG00140_ch_T0001505;gene_id=HG00140_ch_G0000510;Parent=HG00140_ch_T0001505;transcript_name=HG00140_ch_T0001505;gene_name=RBMY2WP;ID=intron:HG00140_ch_T0001505:3;Name=RBMY2WP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22957257	22957358	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=HG00140_ch_T0001505;gene_id=HG00140_ch_G0000510;Parent=HG00140_ch_T0001505;transcript_name=HG00140_ch_T0001505;gene_name=RBMY2WP;ID=exon:HG00140_ch_T0001505:4;Name=RBMY2WP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	22957359	22957768	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=HG00140_ch_T0001505;gene_id=HG00140_ch_G0000510;Parent=HG00140_ch_T0001505;transcript_name=HG00140_ch_T0001505;gene_name=RBMY2WP;ID=intron:HG00140_ch_T0001505:4;Name=RBMY2WP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	22957769	22957881	.	-	.	source_transcript=ENST00000424230.1;source_transcript_name=RBMY2WP-201;source_gene=ENSG00000230727.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230727.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000424230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2WP;transcript_id=HG00140_ch_T0001505;gene_id=HG00140_ch_G0000510;Parent=HG00140_ch_T0001505;transcript_name=HG00140_ch_T0001505;gene_name=RBMY2WP;ID=exon:HG00140_ch_T0001505:5;Name=RBMY2WP;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	23005207	23010297	.	-	.	source_gene_common_name=ENSG00000308317;source_gene=ENSG00000308317.1;gene_id=HG00140_ch_G0000511;gene_biotype=lncRNA;gene_name=ENSG00000308317;gene_sources=liftoff;ID=HG00140_ch_G0000511;Name=ENSG00000308317
HG00140_chrY	CAT	transcript	23005207	23010297	1000	-	.	source_transcript=ENST00000833217.1;source_transcript_name=ENST00000833217;source_gene=ENSG00000308317.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308317.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000833217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000833217.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308317;transcript_id=HG00140_ch_T0001506;gene_id=HG00140_ch_G0000511;Parent=HG00140_ch_G0000511;transcript_name=HG00140_ch_T0001506;gene_name=ENSG00000308317;ID=HG00140_ch_T0001506;Name=ENSG00000308317
HG00140_chrY	CAT	exon	23005207	23005548	.	-	.	source_transcript=ENST00000833217.1;source_transcript_name=ENST00000833217;source_gene=ENSG00000308317.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308317.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000833217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000833217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308317;transcript_id=HG00140_ch_T0001506;gene_id=HG00140_ch_G0000511;Parent=HG00140_ch_T0001506;transcript_name=HG00140_ch_T0001506;gene_name=ENSG00000308317;ID=exon:HG00140_ch_T0001506:0;Name=ENSG00000308317;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23005549	23010200	.	-	.	source_transcript=ENST00000833217.1;source_transcript_name=ENST00000833217;source_gene=ENSG00000308317.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308317.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000833217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000833217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308317;transcript_id=HG00140_ch_T0001506;gene_id=HG00140_ch_G0000511;Parent=HG00140_ch_T0001506;transcript_name=HG00140_ch_T0001506;gene_name=ENSG00000308317;ID=intron:HG00140_ch_T0001506:0;Name=ENSG00000308317;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23010201	23010297	.	-	.	source_transcript=ENST00000833217.1;source_transcript_name=ENST00000833217;source_gene=ENSG00000308317.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308317.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000833217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000833217.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308317;transcript_id=HG00140_ch_T0001506;gene_id=HG00140_ch_G0000511;Parent=HG00140_ch_T0001506;transcript_name=HG00140_ch_T0001506;gene_name=ENSG00000308317;ID=exon:HG00140_ch_T0001506:1;Name=ENSG00000308317;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	23039691	23040822	.	+	.	source_gene_common_name=TTTY17B;source_gene=ENSG00000227439.1;alternative_source_transcripts=ENST00000416110.1,ENST00000416110.1;gene_id=HG00140_ch_G0000512;gene_biotype=lncRNA;gene_name=TTTY17B;gene_sources=liftoff;ID=HG00140_ch_G0000512;Name=TTTY17B
HG00140_chrY	CAT	transcript	23039691	23040822	1000	+	.	source_transcript=ENST00000441906.1;source_transcript_name=TTTY17B-201;source_gene=ENSG00000227439.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000227439.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441906.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441906.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;alternative_source_transcripts=ENST00000416110.1,ENST00000416110.1;transcript_id=HG00140_ch_T0001507;gene_id=HG00140_ch_G0000512;Parent=HG00140_ch_G0000512;transcript_name=HG00140_ch_T0001507;gene_name=TTTY17B;ID=HG00140_ch_T0001507;Name=TTTY17B
HG00140_chrY	CAT	exon	23039691	23039750	.	+	.	source_transcript=ENST00000441906.1;source_transcript_name=TTTY17B-201;source_gene=ENSG00000227439.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000227439.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441906.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441906.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;alternative_source_transcripts=ENST00000416110.1,ENST00000416110.1;transcript_id=HG00140_ch_T0001507;gene_id=HG00140_ch_G0000512;Parent=HG00140_ch_T0001507;transcript_name=HG00140_ch_T0001507;gene_name=TTTY17B;ID=exon:HG00140_ch_T0001507:0;Name=TTTY17B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23039751	23040716	.	+	.	source_transcript=ENST00000441906.1;source_transcript_name=TTTY17B-201;source_gene=ENSG00000227439.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000227439.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441906.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441906.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;alternative_source_transcripts=ENST00000416110.1,ENST00000416110.1;transcript_id=HG00140_ch_T0001507;gene_id=HG00140_ch_G0000512;Parent=HG00140_ch_T0001507;transcript_name=HG00140_ch_T0001507;gene_name=TTTY17B;ID=intron:HG00140_ch_T0001507:0;Name=TTTY17B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23040717	23040822	.	+	.	source_transcript=ENST00000441906.1;source_transcript_name=TTTY17B-201;source_gene=ENSG00000227439.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000227439.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000441906.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441906.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;alternative_source_transcripts=ENST00000416110.1,ENST00000416110.1;transcript_id=HG00140_ch_T0001507;gene_id=HG00140_ch_G0000512;Parent=HG00140_ch_T0001507;transcript_name=HG00140_ch_T0001507;gene_name=TTTY17B;ID=exon:HG00140_ch_T0001507:1;Name=TTTY17B;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	23049222	23049944	.	-	.	source_gene_common_name=ENSG00000276829;source_gene=ENSG00000276829.1;alternative_source_transcripts=ENST00000613297.1,ENST00000613297.1;gene_id=HG00140_ch_G0000513;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000276829;gene_sources=liftoff;ID=HG00140_ch_G0000513;Name=ENSG00000276829
HG00140_chrY	CAT	transcript	23049222	23049944	1000	-	.	source_transcript=ENST00000613297.1;source_transcript_name=ENST00000613297;source_gene=ENSG00000276829.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000276829.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613297.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000276829;alternative_source_transcripts=ENST00000613297.1,ENST00000613297.1;transcript_id=HG00140_ch_T0001508;gene_id=HG00140_ch_G0000513;Parent=HG00140_ch_G0000513;transcript_name=HG00140_ch_T0001508;gene_name=ENSG00000276829;ID=HG00140_ch_T0001508;Name=ENSG00000276829
HG00140_chrY	CAT	exon	23049222	23049382	.	-	.	source_transcript=ENST00000613297.1;source_transcript_name=ENST00000613297;source_gene=ENSG00000276829.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000276829.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000276829;alternative_source_transcripts=ENST00000613297.1,ENST00000613297.1;transcript_id=HG00140_ch_T0001508;gene_id=HG00140_ch_G0000513;Parent=HG00140_ch_T0001508;transcript_name=HG00140_ch_T0001508;gene_name=ENSG00000276829;ID=exon:HG00140_ch_T0001508:0;Name=ENSG00000276829;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23049383	23049653	.	-	.	source_transcript=ENST00000613297.1;source_transcript_name=ENST00000613297;source_gene=ENSG00000276829.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000276829.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000276829;alternative_source_transcripts=ENST00000613297.1,ENST00000613297.1;transcript_id=HG00140_ch_T0001508;gene_id=HG00140_ch_G0000513;Parent=HG00140_ch_T0001508;transcript_name=HG00140_ch_T0001508;gene_name=ENSG00000276829;ID=intron:HG00140_ch_T0001508:0;Name=ENSG00000276829;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23049654	23049944	.	-	.	source_transcript=ENST00000613297.1;source_transcript_name=ENST00000613297;source_gene=ENSG00000276829.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000276829.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000613297.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000613297.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000276829;alternative_source_transcripts=ENST00000613297.1,ENST00000613297.1;transcript_id=HG00140_ch_T0001508;gene_id=HG00140_ch_G0000513;Parent=HG00140_ch_T0001508;transcript_name=HG00140_ch_T0001508;gene_name=ENSG00000276829;ID=exon:HG00140_ch_T0001508:1;Name=ENSG00000276829;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	23054624	23055866	.	-	.	source_gene_common_name=ZNF736P12Y;source_gene=ENSG00000232003.2;gene_id=HG00140_ch_G0000514;gene_biotype=processed_pseudogene;gene_name=ZNF736P12Y;gene_sources=liftoff;ID=HG00140_ch_G0000514;Name=ZNF736P12Y
HG00140_chrY	CAT	transcript	23054624	23055866	1000	-	.	source_transcript=ENST00000443152.1;source_transcript_name=ZNF736P12Y-201;source_gene=ENSG00000232003.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232003.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000443152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443152.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P12Y;transcript_id=HG00140_ch_T0001509;gene_id=HG00140_ch_G0000514;Parent=HG00140_ch_G0000514;transcript_name=HG00140_ch_T0001509;gene_name=ZNF736P12Y;ID=HG00140_ch_T0001509;Name=ZNF736P12Y
HG00140_chrY	CAT	exon	23054624	23055866	.	-	.	source_transcript=ENST00000443152.1;source_transcript_name=ZNF736P12Y-201;source_gene=ENSG00000232003.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232003.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000443152.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P12Y;transcript_id=HG00140_ch_T0001509;gene_id=HG00140_ch_G0000514;Parent=HG00140_ch_T0001509;transcript_name=HG00140_ch_T0001509;gene_name=ZNF736P12Y;ID=exon:HG00140_ch_T0001509:0;Name=ZNF736P12Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	23124575	23161384	.	+	.	source_gene_common_name=TTTY4B;source_gene=ENSG00000235412.1;alternative_source_transcripts=ENST00000436568.1,ENST00000436568.1;gene_id=HG00140_ch_G0000515;gene_biotype=lncRNA;gene_name=TTTY4B;gene_sources=liftoff;ID=HG00140_ch_G0000515;Name=TTTY4B
HG00140_chrY	CAT	transcript	23124575	23161384	1000	+	.	source_transcript=ENST00000420149.1;source_transcript_name=TTTY4B-201;source_gene=ENSG00000235412.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235412.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000420149.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420149.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=ENST00000436568.1,ENST00000436568.1;transcript_id=HG00140_ch_T0001510;gene_id=HG00140_ch_G0000515;Parent=HG00140_ch_G0000515;transcript_name=HG00140_ch_T0001510;gene_name=TTTY4B;ID=HG00140_ch_T0001510;Name=TTTY4B
HG00140_chrY	CAT	exon	23124575	23124735	.	+	.	source_transcript=ENST00000420149.1;source_transcript_name=TTTY4B-201;source_gene=ENSG00000235412.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235412.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000420149.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420149.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=ENST00000436568.1,ENST00000436568.1;transcript_id=HG00140_ch_T0001510;gene_id=HG00140_ch_G0000515;Parent=HG00140_ch_T0001510;transcript_name=HG00140_ch_T0001510;gene_name=TTTY4B;ID=exon:HG00140_ch_T0001510:0;Name=TTTY4B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23124736	23151745	.	+	.	source_transcript=ENST00000420149.1;source_transcript_name=TTTY4B-201;source_gene=ENSG00000235412.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235412.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000420149.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420149.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=ENST00000436568.1,ENST00000436568.1;transcript_id=HG00140_ch_T0001510;gene_id=HG00140_ch_G0000515;Parent=HG00140_ch_T0001510;transcript_name=HG00140_ch_T0001510;gene_name=TTTY4B;ID=intron:HG00140_ch_T0001510:0;Name=TTTY4B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23151746	23151821	.	+	.	source_transcript=ENST00000420149.1;source_transcript_name=TTTY4B-201;source_gene=ENSG00000235412.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235412.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000420149.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420149.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=ENST00000436568.1,ENST00000436568.1;transcript_id=HG00140_ch_T0001510;gene_id=HG00140_ch_G0000515;Parent=HG00140_ch_T0001510;transcript_name=HG00140_ch_T0001510;gene_name=TTTY4B;ID=exon:HG00140_ch_T0001510:1;Name=TTTY4B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23151822	23153625	.	+	.	source_transcript=ENST00000420149.1;source_transcript_name=TTTY4B-201;source_gene=ENSG00000235412.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235412.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000420149.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420149.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=ENST00000436568.1,ENST00000436568.1;transcript_id=HG00140_ch_T0001510;gene_id=HG00140_ch_G0000515;Parent=HG00140_ch_T0001510;transcript_name=HG00140_ch_T0001510;gene_name=TTTY4B;ID=intron:HG00140_ch_T0001510:1;Name=TTTY4B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23153626	23153733	.	+	.	source_transcript=ENST00000420149.1;source_transcript_name=TTTY4B-201;source_gene=ENSG00000235412.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235412.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000420149.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420149.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=ENST00000436568.1,ENST00000436568.1;transcript_id=HG00140_ch_T0001510;gene_id=HG00140_ch_G0000515;Parent=HG00140_ch_T0001510;transcript_name=HG00140_ch_T0001510;gene_name=TTTY4B;ID=exon:HG00140_ch_T0001510:2;Name=TTTY4B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23153734	23160383	.	+	.	source_transcript=ENST00000420149.1;source_transcript_name=TTTY4B-201;source_gene=ENSG00000235412.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235412.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000420149.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420149.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=ENST00000436568.1,ENST00000436568.1;transcript_id=HG00140_ch_T0001510;gene_id=HG00140_ch_G0000515;Parent=HG00140_ch_T0001510;transcript_name=HG00140_ch_T0001510;gene_name=TTTY4B;ID=intron:HG00140_ch_T0001510:2;Name=TTTY4B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23160384	23161384	.	+	.	source_transcript=ENST00000420149.1;source_transcript_name=TTTY4B-201;source_gene=ENSG00000235412.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000235412.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000420149.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420149.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=ENST00000436568.1,ENST00000436568.1;transcript_id=HG00140_ch_T0001510;gene_id=HG00140_ch_G0000515;Parent=HG00140_ch_T0001510;transcript_name=HG00140_ch_T0001510;gene_name=TTTY4B;ID=exon:HG00140_ch_T0001510:3;Name=TTTY4B;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	23161919	23193566	.	+	.	source_gene_common_name=BPY2B;source_gene=ENSG00000183795.8;alternative_source_transcripts=ENST00000602732.5,ENST00000602732.5;gene_id=HG00140_ch_G0000516;gene_biotype=protein_coding;gene_name=BPY2B;gene_sources=liftoff;ID=HG00140_ch_G0000516;Name=BPY2B
HG00140_chrY	CAT	transcript	23161919	23180476	10000	+	.	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602732.5,ENST00000602732.5;transcript_id=HG00140_ch_T0001511;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_G0000516;transcript_name=HG00140_ch_T0001511;gene_name=BPY2B;ID=HG00140_ch_T0001511;Name=BPY2B
HG00140_chrY	CAT	exon	23161919	23162074	.	+	.	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602732.5,ENST00000602732.5;transcript_id=HG00140_ch_T0001511;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001511;transcript_name=HG00140_ch_T0001511;gene_name=BPY2B;ID=exon:HG00140_ch_T0001511:0;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23162075	23172247	.	+	.	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602732.5,ENST00000602732.5;transcript_id=HG00140_ch_T0001511;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001511;transcript_name=HG00140_ch_T0001511;gene_name=BPY2B;ID=intron:HG00140_ch_T0001511:0;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23172248	23172316	.	+	.	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602732.5,ENST00000602732.5;transcript_id=HG00140_ch_T0001511;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001511;transcript_name=HG00140_ch_T0001511;gene_name=BPY2B;ID=exon:HG00140_ch_T0001511:1;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23172317	23172668	.	+	.	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602732.5,ENST00000602732.5;transcript_id=HG00140_ch_T0001511;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001511;transcript_name=HG00140_ch_T0001511;gene_name=BPY2B;ID=intron:HG00140_ch_T0001511:1;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23172669	23172791	.	+	.	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602732.5,ENST00000602732.5;transcript_id=HG00140_ch_T0001511;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001511;transcript_name=HG00140_ch_T0001511;gene_name=BPY2B;ID=exon:HG00140_ch_T0001511:2;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23172792	23175856	.	+	.	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602732.5,ENST00000602732.5;transcript_id=HG00140_ch_T0001511;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001511;transcript_name=HG00140_ch_T0001511;gene_name=BPY2B;ID=intron:HG00140_ch_T0001511:2;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23175857	23175993	.	+	.	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602732.5,ENST00000602732.5;transcript_id=HG00140_ch_T0001511;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001511;transcript_name=HG00140_ch_T0001511;gene_name=BPY2B;ID=exon:HG00140_ch_T0001511:3;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23175994	23180402	.	+	.	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602732.5,ENST00000602732.5;transcript_id=HG00140_ch_T0001511;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001511;transcript_name=HG00140_ch_T0001511;gene_name=BPY2B;ID=intron:HG00140_ch_T0001511:3;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23180403	23180476	.	+	.	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602732.5,ENST00000602732.5;transcript_id=HG00140_ch_T0001511;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001511;transcript_name=HG00140_ch_T0001511;gene_name=BPY2B;ID=exon:HG00140_ch_T0001511:4;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23180444	23180476	.	+	0	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602732.5,ENST00000602732.5;transcript_id=HG00140_ch_T0001511;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001511;transcript_name=HG00140_ch_T0001511;gene_name=BPY2B;ID=CDS:HG00140_ch_T0001511:0;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	23180444	23180446	.	+	0	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602732.5,ENST00000602732.5;transcript_id=HG00140_ch_T0001511;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001511;transcript_name=HG00140_ch_T0001511;gene_name=BPY2B;ID=start_codon:HG00140_ch_T0001511;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	23180474	23180476	.	+	0	source_transcript=ENST00000602770.5;source_transcript_name=BPY2B-203;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602770.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602770.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602732.5,ENST00000602732.5;transcript_id=HG00140_ch_T0001511;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001511;transcript_name=HG00140_ch_T0001511;gene_name=BPY2B;ID=stop_codon:HG00140_ch_T0001511;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	23172363	23193566	100	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000331070.8;transcript_id=HG00140_ch_T0001512;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_G0000516;transcript_name=HG00140_ch_T0001512;gene_name=BPY2B;ID=HG00140_ch_T0001512;Name=BPY2B
HG00140_chrY	CAT	exon	23172363	23172393	.	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000331070.8;transcript_id=HG00140_ch_T0001512;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001512;transcript_name=HG00140_ch_T0001512;gene_name=BPY2B;ID=exon:HG00140_ch_T0001512:0;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23172394	23172668	.	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000331070.8;transcript_id=HG00140_ch_T0001512;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001512;transcript_name=HG00140_ch_T0001512;gene_name=BPY2B;ID=intron:HG00140_ch_T0001512:0;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23172669	23172791	.	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000331070.8;transcript_id=HG00140_ch_T0001512;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001512;transcript_name=HG00140_ch_T0001512;gene_name=BPY2B;ID=exon:HG00140_ch_T0001512:1;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23172792	23175856	.	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000331070.8;transcript_id=HG00140_ch_T0001512;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001512;transcript_name=HG00140_ch_T0001512;gene_name=BPY2B;ID=intron:HG00140_ch_T0001512:1;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23175857	23175993	.	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000331070.8;transcript_id=HG00140_ch_T0001512;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001512;transcript_name=HG00140_ch_T0001512;gene_name=BPY2B;ID=exon:HG00140_ch_T0001512:2;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23175994	23180402	.	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000331070.8;transcript_id=HG00140_ch_T0001512;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001512;transcript_name=HG00140_ch_T0001512;gene_name=BPY2B;ID=intron:HG00140_ch_T0001512:2;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23180403	23180521	.	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000331070.8;transcript_id=HG00140_ch_T0001512;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001512;transcript_name=HG00140_ch_T0001512;gene_name=BPY2B;ID=exon:HG00140_ch_T0001512:3;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23180444	23180521	.	+	0	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000331070.8;transcript_id=HG00140_ch_T0001512;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001512;transcript_name=HG00140_ch_T0001512;gene_name=BPY2B;ID=CDS:HG00140_ch_T0001512:0;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	23180444	23180446	.	+	0	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000331070.8;transcript_id=HG00140_ch_T0001512;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001512;transcript_name=HG00140_ch_T0001512;gene_name=BPY2B;ID=start_codon:HG00140_ch_T0001512;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23180522	23182580	.	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000331070.8;transcript_id=HG00140_ch_T0001512;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001512;transcript_name=HG00140_ch_T0001512;gene_name=BPY2B;ID=intron:HG00140_ch_T0001512:3;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23182581	23182698	.	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000331070.8;transcript_id=HG00140_ch_T0001512;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001512;transcript_name=HG00140_ch_T0001512;gene_name=BPY2B;ID=exon:HG00140_ch_T0001512:4;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23182581	23182698	.	+	0	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000331070.8;transcript_id=HG00140_ch_T0001512;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001512;transcript_name=HG00140_ch_T0001512;gene_name=BPY2B;ID=CDS:HG00140_ch_T0001512:1;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23182699	23185552	.	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000331070.8;transcript_id=HG00140_ch_T0001512;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001512;transcript_name=HG00140_ch_T0001512;gene_name=BPY2B;ID=intron:HG00140_ch_T0001512:4;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23185553	23185658	.	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000331070.8;transcript_id=HG00140_ch_T0001512;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001512;transcript_name=HG00140_ch_T0001512;gene_name=BPY2B;ID=exon:HG00140_ch_T0001512:5;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23185553	23185658	.	+	2	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000331070.8;transcript_id=HG00140_ch_T0001512;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001512;transcript_name=HG00140_ch_T0001512;gene_name=BPY2B;ID=CDS:HG00140_ch_T0001512:2;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23185659	23186350	.	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000331070.8;transcript_id=HG00140_ch_T0001512;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001512;transcript_name=HG00140_ch_T0001512;gene_name=BPY2B;ID=intron:HG00140_ch_T0001512:5;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23186351	23186475	.	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000331070.8;transcript_id=HG00140_ch_T0001512;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001512;transcript_name=HG00140_ch_T0001512;gene_name=BPY2B;ID=exon:HG00140_ch_T0001512:6;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23186351	23186369	.	+	1	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000331070.8;transcript_id=HG00140_ch_T0001512;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001512;transcript_name=HG00140_ch_T0001512;gene_name=BPY2B;ID=CDS:HG00140_ch_T0001512:3;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	23186367	23186369	.	+	0	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000331070.8;transcript_id=HG00140_ch_T0001512;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001512;transcript_name=HG00140_ch_T0001512;gene_name=BPY2B;ID=stop_codon:HG00140_ch_T0001512;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23186476	23193025	.	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000331070.8;transcript_id=HG00140_ch_T0001512;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001512;transcript_name=HG00140_ch_T0001512;gene_name=BPY2B;ID=intron:HG00140_ch_T0001512:6;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23193026	23193150	.	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000331070.8;transcript_id=HG00140_ch_T0001512;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001512;transcript_name=HG00140_ch_T0001512;gene_name=BPY2B;ID=exon:HG00140_ch_T0001512:7;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23193151	23193244	.	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000331070.8;transcript_id=HG00140_ch_T0001512;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001512;transcript_name=HG00140_ch_T0001512;gene_name=BPY2B;ID=intron:HG00140_ch_T0001512:7;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23193245	23193566	.	+	.	source_transcript=ENST00000382392.5;source_transcript_name=BPY2B-201;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382392.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382392.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000331070.8,ENST00000331070.8;transcript_id=HG00140_ch_T0001512;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001512;transcript_name=HG00140_ch_T0001512;gene_name=BPY2B;ID=exon:HG00140_ch_T0001512:8;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	23172387	23193507	1000	+	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602818.2;transcript_id=HG00140_ch_T0001513;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_G0000516;transcript_name=HG00140_ch_T0001513;gene_name=BPY2B;ID=HG00140_ch_T0001513;Name=BPY2B
HG00140_chrY	CAT	exon	23172387	23172393	.	+	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602818.2;transcript_id=HG00140_ch_T0001513;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001513;transcript_name=HG00140_ch_T0001513;gene_name=BPY2B;ID=exon:HG00140_ch_T0001513:0;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23172394	23172668	.	+	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602818.2;transcript_id=HG00140_ch_T0001513;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001513;transcript_name=HG00140_ch_T0001513;gene_name=BPY2B;ID=intron:HG00140_ch_T0001513:0;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23172669	23172791	.	+	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602818.2;transcript_id=HG00140_ch_T0001513;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001513;transcript_name=HG00140_ch_T0001513;gene_name=BPY2B;ID=exon:HG00140_ch_T0001513:1;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23172792	23175856	.	+	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602818.2;transcript_id=HG00140_ch_T0001513;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001513;transcript_name=HG00140_ch_T0001513;gene_name=BPY2B;ID=intron:HG00140_ch_T0001513:1;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23175857	23175993	.	+	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602818.2;transcript_id=HG00140_ch_T0001513;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001513;transcript_name=HG00140_ch_T0001513;gene_name=BPY2B;ID=exon:HG00140_ch_T0001513:2;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23175994	23180402	.	+	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602818.2;transcript_id=HG00140_ch_T0001513;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001513;transcript_name=HG00140_ch_T0001513;gene_name=BPY2B;ID=intron:HG00140_ch_T0001513:2;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23180403	23180521	.	+	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602818.2;transcript_id=HG00140_ch_T0001513;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001513;transcript_name=HG00140_ch_T0001513;gene_name=BPY2B;ID=exon:HG00140_ch_T0001513:3;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23180522	23185552	.	+	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602818.2;transcript_id=HG00140_ch_T0001513;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001513;transcript_name=HG00140_ch_T0001513;gene_name=BPY2B;ID=intron:HG00140_ch_T0001513:3;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23185553	23185658	.	+	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602818.2;transcript_id=HG00140_ch_T0001513;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001513;transcript_name=HG00140_ch_T0001513;gene_name=BPY2B;ID=exon:HG00140_ch_T0001513:4;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23185659	23186350	.	+	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602818.2;transcript_id=HG00140_ch_T0001513;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001513;transcript_name=HG00140_ch_T0001513;gene_name=BPY2B;ID=intron:HG00140_ch_T0001513:4;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23186351	23186475	.	+	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602818.2;transcript_id=HG00140_ch_T0001513;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001513;transcript_name=HG00140_ch_T0001513;gene_name=BPY2B;ID=exon:HG00140_ch_T0001513:5;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23186476	23193025	.	+	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602818.2;transcript_id=HG00140_ch_T0001513;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001513;transcript_name=HG00140_ch_T0001513;gene_name=BPY2B;ID=intron:HG00140_ch_T0001513:5;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23193026	23193155	.	+	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602818.2;transcript_id=HG00140_ch_T0001513;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001513;transcript_name=HG00140_ch_T0001513;gene_name=BPY2B;ID=exon:HG00140_ch_T0001513:6;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23193156	23193244	.	+	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602818.2;transcript_id=HG00140_ch_T0001513;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001513;transcript_name=HG00140_ch_T0001513;gene_name=BPY2B;ID=intron:HG00140_ch_T0001513:6;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23193245	23193507	.	+	.	source_transcript=ENST00000602549.1;source_transcript_name=BPY2B-202;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602549.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000602818.2,ENST00000602818.2;transcript_id=HG00140_ch_T0001513;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001513;transcript_name=HG00140_ch_T0001513;gene_name=BPY2B;ID=exon:HG00140_ch_T0001513:7;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	23180444	23186369	100	+	.	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000382585.2;transcript_id=HG00140_ch_T0001514;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_G0000516;transcript_name=HG00140_ch_T0001514;gene_name=BPY2B;ID=HG00140_ch_T0001514;Name=BPY2B
HG00140_chrY	CAT	exon	23180444	23180521	.	+	.	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000382585.2;transcript_id=HG00140_ch_T0001514;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001514;transcript_name=HG00140_ch_T0001514;gene_name=BPY2B;ID=exon:HG00140_ch_T0001514:0;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23180444	23180521	.	+	0	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000382585.2;transcript_id=HG00140_ch_T0001514;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001514;transcript_name=HG00140_ch_T0001514;gene_name=BPY2B;ID=CDS:HG00140_ch_T0001514:0;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	23180444	23180446	.	+	0	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000382585.2;transcript_id=HG00140_ch_T0001514;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001514;transcript_name=HG00140_ch_T0001514;gene_name=BPY2B;ID=start_codon:HG00140_ch_T0001514;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23180522	23182580	.	+	.	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000382585.2;transcript_id=HG00140_ch_T0001514;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001514;transcript_name=HG00140_ch_T0001514;gene_name=BPY2B;ID=intron:HG00140_ch_T0001514:0;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23182581	23182698	.	+	.	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000382585.2;transcript_id=HG00140_ch_T0001514;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001514;transcript_name=HG00140_ch_T0001514;gene_name=BPY2B;ID=exon:HG00140_ch_T0001514:1;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23182581	23182698	.	+	0	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000382585.2;transcript_id=HG00140_ch_T0001514;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001514;transcript_name=HG00140_ch_T0001514;gene_name=BPY2B;ID=CDS:HG00140_ch_T0001514:1;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23182699	23185552	.	+	.	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000382585.2;transcript_id=HG00140_ch_T0001514;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001514;transcript_name=HG00140_ch_T0001514;gene_name=BPY2B;ID=intron:HG00140_ch_T0001514:1;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23185553	23185658	.	+	.	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000382585.2;transcript_id=HG00140_ch_T0001514;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001514;transcript_name=HG00140_ch_T0001514;gene_name=BPY2B;ID=exon:HG00140_ch_T0001514:2;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23185553	23185658	.	+	2	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000382585.2;transcript_id=HG00140_ch_T0001514;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001514;transcript_name=HG00140_ch_T0001514;gene_name=BPY2B;ID=CDS:HG00140_ch_T0001514:2;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23185659	23186350	.	+	.	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000382585.2;transcript_id=HG00140_ch_T0001514;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001514;transcript_name=HG00140_ch_T0001514;gene_name=BPY2B;ID=intron:HG00140_ch_T0001514:2;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23186351	23186369	.	+	.	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000382585.2;transcript_id=HG00140_ch_T0001514;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001514;transcript_name=HG00140_ch_T0001514;gene_name=BPY2B;ID=exon:HG00140_ch_T0001514:3;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23186351	23186369	.	+	1	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000382585.2;transcript_id=HG00140_ch_T0001514;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001514;transcript_name=HG00140_ch_T0001514;gene_name=BPY2B;ID=CDS:HG00140_ch_T0001514:3;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	23186367	23186369	.	+	0	source_transcript=ENST00000615850.1;source_transcript_name=BPY2B-204;source_gene=ENSG00000183795.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183795.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000615850.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000615850.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=ENST00000382585.2,ENST00000382585.2;transcript_id=HG00140_ch_T0001514;gene_id=HG00140_ch_G0000516;Parent=HG00140_ch_T0001514;transcript_name=HG00140_ch_T0001514;gene_name=BPY2B;ID=stop_codon:HG00140_ch_T0001514;Name=BPY2B;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	23205167	23205893	.	+	.	source_gene_common_name=ENSG00000240566;source_gene=ENSG00000240566.1;gene_id=HG00140_ch_G0000517;gene_biotype=processed_pseudogene;gene_name=ENSG00000240566;gene_sources=liftoff;ID=HG00140_ch_G0000517;Name=ENSG00000240566
HG00140_chrY	CAT	transcript	23205167	23205893	1000	+	.	source_transcript=ENST00000432862.1;source_transcript_name=ENST00000432862;source_gene=ENSG00000240566.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000240566.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000432862.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432862.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000240566;transcript_id=HG00140_ch_T0001515;gene_id=HG00140_ch_G0000517;Parent=HG00140_ch_G0000517;transcript_name=HG00140_ch_T0001515;gene_name=ENSG00000240566;ID=HG00140_ch_T0001515;Name=ENSG00000240566
HG00140_chrY	CAT	exon	23205167	23205893	.	+	.	source_transcript=ENST00000432862.1;source_transcript_name=ENST00000432862;source_gene=ENSG00000240566.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000240566.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000432862.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000432862.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000240566;transcript_id=HG00140_ch_T0001515;gene_id=HG00140_ch_G0000517;Parent=HG00140_ch_T0001515;transcript_name=HG00140_ch_T0001515;gene_name=ENSG00000240566;ID=exon:HG00140_ch_T0001515:0;Name=ENSG00000240566;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	23213696	23214765	.	+	.	source_gene_common_name=TRIM60P10Y;source_gene=ENSG00000232976.1;gene_id=HG00140_ch_G0000518;gene_biotype=processed_pseudogene;gene_name=TRIM60P10Y;gene_sources=liftoff;ID=HG00140_ch_G0000518;Name=TRIM60P10Y
HG00140_chrY	CAT	transcript	23213696	23214765	1000	+	.	source_transcript=ENST00000425589.1;source_transcript_name=TRIM60P10Y-201;source_gene=ENSG00000232976.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232976.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425589.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425589.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P10Y;transcript_id=HG00140_ch_T0001516;gene_id=HG00140_ch_G0000518;Parent=HG00140_ch_G0000518;transcript_name=HG00140_ch_T0001516;gene_name=TRIM60P10Y;ID=HG00140_ch_T0001516;Name=TRIM60P10Y
HG00140_chrY	CAT	exon	23213696	23213926	.	+	.	source_transcript=ENST00000425589.1;source_transcript_name=TRIM60P10Y-201;source_gene=ENSG00000232976.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232976.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425589.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425589.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P10Y;transcript_id=HG00140_ch_T0001516;gene_id=HG00140_ch_G0000518;Parent=HG00140_ch_T0001516;transcript_name=HG00140_ch_T0001516;gene_name=TRIM60P10Y;ID=exon:HG00140_ch_T0001516:0;Name=TRIM60P10Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23213927	23214245	.	+	.	source_transcript=ENST00000425589.1;source_transcript_name=TRIM60P10Y-201;source_gene=ENSG00000232976.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232976.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425589.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425589.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P10Y;transcript_id=HG00140_ch_T0001516;gene_id=HG00140_ch_G0000518;Parent=HG00140_ch_T0001516;transcript_name=HG00140_ch_T0001516;gene_name=TRIM60P10Y;ID=intron:HG00140_ch_T0001516:0;Name=TRIM60P10Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23214246	23214765	.	+	.	source_transcript=ENST00000425589.1;source_transcript_name=TRIM60P10Y-201;source_gene=ENSG00000232976.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232976.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425589.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425589.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P10Y;transcript_id=HG00140_ch_T0001516;gene_id=HG00140_ch_G0000518;Parent=HG00140_ch_T0001516;transcript_name=HG00140_ch_T0001516;gene_name=TRIM60P10Y;ID=exon:HG00140_ch_T0001516:1;Name=TRIM60P10Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	23238019	23239297	.	+	.	source_gene_common_name=ZNF736P2Y;source_gene=ENSG00000226270.3;gene_id=HG00140_ch_G0000519;gene_biotype=processed_pseudogene;gene_name=ZNF736P2Y;gene_sources=liftoff;ID=HG00140_ch_G0000519;Name=ZNF736P2Y
HG00140_chrY	CAT	transcript	23238019	23239297	1000	+	.	source_transcript=ENST00000416040.1;source_transcript_name=ZNF736P2Y-201;source_gene=ENSG00000226270.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226270.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000416040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416040.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P2Y;transcript_id=HG00140_ch_T0001517;gene_id=HG00140_ch_G0000519;Parent=HG00140_ch_G0000519;transcript_name=HG00140_ch_T0001517;gene_name=ZNF736P2Y;ID=HG00140_ch_T0001517;Name=ZNF736P2Y
HG00140_chrY	CAT	exon	23238019	23239297	.	+	.	source_transcript=ENST00000416040.1;source_transcript_name=ZNF736P2Y-201;source_gene=ENSG00000226270.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000226270.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000416040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416040.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P2Y;transcript_id=HG00140_ch_T0001517;gene_id=HG00140_ch_G0000519;Parent=HG00140_ch_T0001517;transcript_name=HG00140_ch_T0001517;gene_name=ZNF736P2Y;ID=exon:HG00140_ch_T0001517:0;Name=ZNF736P2Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	23246120	23247261	.	+	.	source_gene_common_name=ENSG00000278602;source_gene=ENSG00000278602.1;gene_id=HG00140_ch_G0000520;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000278602;gene_sources=liftoff;ID=HG00140_ch_G0000520;Name=ENSG00000278602
HG00140_chrY	CAT	transcript	23246120	23247261	1000	+	.	source_transcript=ENST00000616864.1;source_transcript_name=ENST00000616864;source_gene=ENSG00000278602.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000278602.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000616864.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000616864.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278602;transcript_id=HG00140_ch_T0001518;gene_id=HG00140_ch_G0000520;Parent=HG00140_ch_G0000520;transcript_name=HG00140_ch_T0001518;gene_name=ENSG00000278602;ID=HG00140_ch_T0001518;Name=ENSG00000278602
HG00140_chrY	CAT	exon	23246120	23246386	.	+	.	source_transcript=ENST00000616864.1;source_transcript_name=ENST00000616864;source_gene=ENSG00000278602.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000278602.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000616864.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000616864.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278602;transcript_id=HG00140_ch_T0001518;gene_id=HG00140_ch_G0000520;Parent=HG00140_ch_T0001518;transcript_name=HG00140_ch_T0001518;gene_name=ENSG00000278602;ID=exon:HG00140_ch_T0001518:0;Name=ENSG00000278602;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23246387	23246737	.	+	.	source_transcript=ENST00000616864.1;source_transcript_name=ENST00000616864;source_gene=ENSG00000278602.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000278602.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000616864.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000616864.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278602;transcript_id=HG00140_ch_T0001518;gene_id=HG00140_ch_G0000520;Parent=HG00140_ch_T0001518;transcript_name=HG00140_ch_T0001518;gene_name=ENSG00000278602;ID=intron:HG00140_ch_T0001518:0;Name=ENSG00000278602;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23246738	23247261	.	+	.	source_transcript=ENST00000616864.1;source_transcript_name=ENST00000616864;source_gene=ENSG00000278602.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000278602.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000616864.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000616864.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278602;transcript_id=HG00140_ch_T0001518;gene_id=HG00140_ch_G0000520;Parent=HG00140_ch_T0001518;transcript_name=HG00140_ch_T0001518;gene_name=ENSG00000278602;ID=exon:HG00140_ch_T0001518:1;Name=ENSG00000278602;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	23317385	23379744	.	-	.	source_gene_common_name=DAZ2;source_gene=ENSG00000205944.12;gene_id=HG00140_ch_G0000521;gene_biotype=protein_coding;gene_name=DAZ2;gene_sources=liftoff;ID=HG00140_ch_G0000521;Name=DAZ2
HG00140_chrY	CAT	transcript	23317385	23379658	100	-	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_G0000521;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=HG00140_ch_T0001519;Name=DAZ2
HG00140_chrY	CAT	exon	23317385	23319241	.	-	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=exon:HG00140_ch_T0001519:0;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23319242	23323204	.	-	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=intron:HG00140_ch_T0001519:0;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23323205	23323303	.	-	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=exon:HG00140_ch_T0001519:1;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23323240	23323303	.	-	1	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001519:0;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	23323240	23323242	.	-	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=stop_codon:HG00140_ch_T0001519;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23323304	23327876	.	-	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=intron:HG00140_ch_T0001519:1;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23327877	23327911	.	-	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=exon:HG00140_ch_T0001519:2;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23327877	23327911	.	-	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001519:1;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23327912	23328655	.	-	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=intron:HG00140_ch_T0001519:2;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23328656	23328727	.	-	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=exon:HG00140_ch_T0001519:3;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23328656	23328727	.	-	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001519:2;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23328728	23331040	.	-	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=intron:HG00140_ch_T0001519:3;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23331041	23331112	.	-	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=exon:HG00140_ch_T0001519:4;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23331041	23331112	.	-	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001519:3;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23331113	23333424	.	-	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=intron:HG00140_ch_T0001519:4;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23333425	23333496	.	-	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=exon:HG00140_ch_T0001519:5;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23333425	23333496	.	-	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001519:4;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23333497	23335808	.	-	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=intron:HG00140_ch_T0001519:5;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23335809	23335880	.	-	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=exon:HG00140_ch_T0001519:6;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23335809	23335880	.	-	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001519:5;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23335881	23338192	.	-	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=intron:HG00140_ch_T0001519:6;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23338193	23338264	.	-	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=exon:HG00140_ch_T0001519:7;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23338193	23338264	.	-	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001519:6;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23338265	23340577	.	-	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=intron:HG00140_ch_T0001519:7;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23340578	23340649	.	-	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=exon:HG00140_ch_T0001519:8;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23340578	23340649	.	-	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001519:7;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23340650	23345345	.	-	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=intron:HG00140_ch_T0001519:8;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23345346	23345417	.	-	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=exon:HG00140_ch_T0001519:9;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23345346	23345417	.	-	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001519:8;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23345418	23355134	.	-	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=intron:HG00140_ch_T0001519:9;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23355135	23355206	.	-	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=exon:HG00140_ch_T0001519:10;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23355135	23355206	.	-	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001519:9;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23355207	23357511	.	-	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=intron:HG00140_ch_T0001519:10;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23357512	23357583	.	-	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=exon:HG00140_ch_T0001519:11;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23357512	23357583	.	-	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001519:10;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23357584	23359907	.	-	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=intron:HG00140_ch_T0001519:11;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23359908	23359979	.	-	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=exon:HG00140_ch_T0001519:12;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23359908	23359979	.	-	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001519:11;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23359980	23362290	.	-	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=intron:HG00140_ch_T0001519:12;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23362291	23362362	.	-	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=exon:HG00140_ch_T0001519:13;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23362291	23362362	.	-	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001519:12;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23362363	23364686	.	-	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=intron:HG00140_ch_T0001519:13;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23364687	23364758	.	-	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=exon:HG00140_ch_T0001519:14;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23364687	23364758	.	-	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001519:13;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23364759	23367077	.	-	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=intron:HG00140_ch_T0001519:14;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23367078	23367149	.	-	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=exon:HG00140_ch_T0001519:15;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23367078	23367149	.	-	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001519:14;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23367150	23369521	.	-	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=intron:HG00140_ch_T0001519:15;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23369522	23369593	.	-	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=exon:HG00140_ch_T0001519:16;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23369522	23369593	.	-	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001519:15;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23369594	23370993	.	-	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=intron:HG00140_ch_T0001519:16;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23370994	23371133	.	-	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=exon:HG00140_ch_T0001519:17;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23370994	23371133	.	-	2	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001519:16;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23371134	23371222	.	-	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=intron:HG00140_ch_T0001519:17;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23371223	23371286	.	-	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=exon:HG00140_ch_T0001519:18;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23371223	23371286	.	-	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001519:17;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23371287	23371722	.	-	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=intron:HG00140_ch_T0001519:18;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23371723	23371774	.	-	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=exon:HG00140_ch_T0001519:19;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23371723	23371774	.	-	1	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001519:18;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23371775	23372334	.	-	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=intron:HG00140_ch_T0001519:19;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23372335	23372426	.	-	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=exon:HG00140_ch_T0001519:20;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23372335	23372426	.	-	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001519:19;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23372427	23372700	.	-	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=intron:HG00140_ch_T0001519:20;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23372701	23372847	.	-	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=exon:HG00140_ch_T0001519:21;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23372701	23372847	.	-	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001519:20;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23372848	23379447	.	-	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=intron:HG00140_ch_T0001519:21;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23379448	23379658	.	-	.	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=exon:HG00140_ch_T0001519:22;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23379448	23379450	.	-	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001519:21;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	23379448	23379450	.	-	0	source_transcript=ENST00000382440.6;source_transcript_name=DAZ2-202;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382440.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382440.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001519;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001519;transcript_name=HG00140_ch_T0001519;gene_name=DAZ2;ID=start_codon:HG00140_ch_T0001519;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	23317385	23379744	100	-	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_G0000521;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=HG00140_ch_T0001520;Name=DAZ2
HG00140_chrY	CAT	exon	23317385	23319241	.	-	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=exon:HG00140_ch_T0001520:0;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23319242	23323204	.	-	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=intron:HG00140_ch_T0001520:0;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23323205	23323303	.	-	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=exon:HG00140_ch_T0001520:1;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23323240	23323303	.	-	1	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001520:0;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	23323240	23323242	.	-	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=stop_codon:HG00140_ch_T0001520;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23323304	23327876	.	-	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=intron:HG00140_ch_T0001520:1;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23327877	23327911	.	-	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=exon:HG00140_ch_T0001520:2;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23327877	23327911	.	-	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001520:1;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23327912	23328655	.	-	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=intron:HG00140_ch_T0001520:2;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23328656	23328727	.	-	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=exon:HG00140_ch_T0001520:3;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23328656	23328727	.	-	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001520:2;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23328728	23331040	.	-	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=intron:HG00140_ch_T0001520:3;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23331041	23331112	.	-	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=exon:HG00140_ch_T0001520:4;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23331041	23331112	.	-	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001520:3;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23331113	23333424	.	-	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=intron:HG00140_ch_T0001520:4;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23333425	23333496	.	-	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=exon:HG00140_ch_T0001520:5;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23333425	23333496	.	-	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001520:4;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23333497	23335808	.	-	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=intron:HG00140_ch_T0001520:5;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23335809	23335880	.	-	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=exon:HG00140_ch_T0001520:6;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23335809	23335880	.	-	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001520:5;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23335881	23338192	.	-	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=intron:HG00140_ch_T0001520:6;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23338193	23338264	.	-	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=exon:HG00140_ch_T0001520:7;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23338193	23338264	.	-	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001520:6;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23338265	23340577	.	-	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=intron:HG00140_ch_T0001520:7;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23340578	23340649	.	-	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=exon:HG00140_ch_T0001520:8;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23340578	23340649	.	-	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001520:7;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23340650	23345345	.	-	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=intron:HG00140_ch_T0001520:8;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23345346	23345417	.	-	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=exon:HG00140_ch_T0001520:9;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23345346	23345417	.	-	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001520:8;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23345418	23355134	.	-	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=intron:HG00140_ch_T0001520:9;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23355135	23355206	.	-	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=exon:HG00140_ch_T0001520:10;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23355135	23355206	.	-	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001520:9;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23355207	23357511	.	-	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=intron:HG00140_ch_T0001520:10;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23357512	23357583	.	-	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=exon:HG00140_ch_T0001520:11;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23357512	23357583	.	-	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001520:10;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23357584	23364686	.	-	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=intron:HG00140_ch_T0001520:11;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23364687	23364758	.	-	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=exon:HG00140_ch_T0001520:12;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23364687	23364758	.	-	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001520:11;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23364759	23367077	.	-	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=intron:HG00140_ch_T0001520:12;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23367078	23367149	.	-	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=exon:HG00140_ch_T0001520:13;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23367078	23367149	.	-	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001520:12;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23367150	23369521	.	-	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=intron:HG00140_ch_T0001520:13;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23369522	23369593	.	-	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=exon:HG00140_ch_T0001520:14;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23369522	23369593	.	-	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001520:13;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23369594	23370993	.	-	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=intron:HG00140_ch_T0001520:14;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23370994	23371133	.	-	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=exon:HG00140_ch_T0001520:15;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23370994	23371133	.	-	2	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001520:14;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23371134	23371222	.	-	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=intron:HG00140_ch_T0001520:15;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23371223	23371286	.	-	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=exon:HG00140_ch_T0001520:16;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23371223	23371286	.	-	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001520:15;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23371287	23371722	.	-	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=intron:HG00140_ch_T0001520:16;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23371723	23371774	.	-	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=exon:HG00140_ch_T0001520:17;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23371723	23371774	.	-	1	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001520:16;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23371775	23372334	.	-	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=intron:HG00140_ch_T0001520:17;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23372335	23372426	.	-	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=exon:HG00140_ch_T0001520:18;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23372335	23372426	.	-	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001520:17;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23372427	23372700	.	-	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=intron:HG00140_ch_T0001520:18;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23372701	23372847	.	-	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=exon:HG00140_ch_T0001520:19;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23372701	23372847	.	-	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001520:18;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23372848	23379447	.	-	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=intron:HG00140_ch_T0001520:19;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23379448	23379744	.	-	.	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=exon:HG00140_ch_T0001520:20;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23379448	23379450	.	-	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001520:19;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	23379448	23379450	.	-	0	source_transcript=ENST00000382449.5;source_transcript_name=DAZ2-203;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382449.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382449.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001520;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001520;transcript_name=HG00140_ch_T0001520;gene_name=DAZ2;ID=start_codon:HG00140_ch_T0001520;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	23318742	23379643	100	-	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_G0000521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=HG00140_ch_T0001521;Name=DAZ2
HG00140_chrY	CAT	exon	23318742	23319241	.	-	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=exon:HG00140_ch_T0001521:0;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23319242	23323204	.	-	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=intron:HG00140_ch_T0001521:0;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23323205	23323303	.	-	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=exon:HG00140_ch_T0001521:1;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23323240	23323303	.	-	1	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001521:0;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	23323240	23323242	.	-	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=stop_codon:HG00140_ch_T0001521;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23323304	23327876	.	-	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=intron:HG00140_ch_T0001521:1;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23327877	23327911	.	-	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=exon:HG00140_ch_T0001521:2;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23327877	23327911	.	-	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001521:1;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23327912	23328655	.	-	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=intron:HG00140_ch_T0001521:2;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23328656	23328727	.	-	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=exon:HG00140_ch_T0001521:3;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23328656	23328727	.	-	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001521:2;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23328728	23331040	.	-	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=intron:HG00140_ch_T0001521:3;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23331041	23331112	.	-	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=exon:HG00140_ch_T0001521:4;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23331041	23331112	.	-	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001521:3;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23331113	23333424	.	-	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=intron:HG00140_ch_T0001521:4;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23333425	23333496	.	-	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=exon:HG00140_ch_T0001521:5;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23333425	23333496	.	-	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001521:4;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23333497	23335808	.	-	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=intron:HG00140_ch_T0001521:5;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23335809	23335880	.	-	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=exon:HG00140_ch_T0001521:6;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23335809	23335880	.	-	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001521:5;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23335881	23338192	.	-	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=intron:HG00140_ch_T0001521:6;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23338193	23338264	.	-	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=exon:HG00140_ch_T0001521:7;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23338193	23338264	.	-	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001521:6;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23338265	23340577	.	-	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=intron:HG00140_ch_T0001521:7;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23340578	23340649	.	-	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=exon:HG00140_ch_T0001521:8;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23340578	23340649	.	-	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001521:7;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23340650	23345345	.	-	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=intron:HG00140_ch_T0001521:8;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23345346	23345417	.	-	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=exon:HG00140_ch_T0001521:9;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23345346	23345417	.	-	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001521:8;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23345418	23355134	.	-	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=intron:HG00140_ch_T0001521:9;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23355135	23355206	.	-	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=exon:HG00140_ch_T0001521:10;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23355135	23355206	.	-	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001521:9;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23355207	23357511	.	-	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=intron:HG00140_ch_T0001521:10;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23357512	23357583	.	-	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=exon:HG00140_ch_T0001521:11;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23357512	23357583	.	-	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001521:10;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23357584	23364686	.	-	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=intron:HG00140_ch_T0001521:11;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23364687	23364758	.	-	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=exon:HG00140_ch_T0001521:12;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23364687	23364758	.	-	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001521:11;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23364759	23367077	.	-	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=intron:HG00140_ch_T0001521:12;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23367078	23367149	.	-	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=exon:HG00140_ch_T0001521:13;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23367078	23367149	.	-	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001521:12;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23367150	23369521	.	-	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=intron:HG00140_ch_T0001521:13;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23369522	23369593	.	-	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=exon:HG00140_ch_T0001521:14;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23369522	23369593	.	-	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001521:13;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23369594	23370993	.	-	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=intron:HG00140_ch_T0001521:14;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23370994	23371133	.	-	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=exon:HG00140_ch_T0001521:15;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23370994	23371133	.	-	2	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001521:14;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23371134	23371222	.	-	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=intron:HG00140_ch_T0001521:15;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23371223	23371286	.	-	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=exon:HG00140_ch_T0001521:16;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23371223	23371286	.	-	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001521:15;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23371287	23371722	.	-	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=intron:HG00140_ch_T0001521:16;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23371723	23371774	.	-	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=exon:HG00140_ch_T0001521:17;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23371723	23371774	.	-	1	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001521:16;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23371775	23372334	.	-	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=intron:HG00140_ch_T0001521:17;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23372335	23372426	.	-	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=exon:HG00140_ch_T0001521:18;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23372335	23372426	.	-	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001521:17;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23372427	23372700	.	-	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=intron:HG00140_ch_T0001521:18;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23372701	23372847	.	-	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=exon:HG00140_ch_T0001521:19;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23372701	23372847	.	-	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001521:18;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23372848	23379447	.	-	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=intron:HG00140_ch_T0001521:19;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23379448	23379643	.	-	.	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=exon:HG00140_ch_T0001521:20;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23379448	23379450	.	-	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=CDS:HG00140_ch_T0001521:19;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	23379448	23379450	.	-	0	source_transcript=ENST00000382433.4;source_transcript_name=DAZ2-201;source_gene=ENSG00000205944.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205944.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382433.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382433.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ2;transcript_id=HG00140_ch_T0001521;gene_id=HG00140_ch_G0000521;Parent=HG00140_ch_T0001521;transcript_name=HG00140_ch_T0001521;gene_name=DAZ2;ID=start_codon:HG00140_ch_T0001521;Name=DAZ2;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	23400181	23472231	.	+	.	source_gene_common_name=DAZ1;source_gene=ENSG00000188120.16;gene_id=HG00140_ch_G0000522;gene_biotype=protein_coding;gene_name=DAZ1;gene_sources=liftoff;ID=HG00140_ch_G0000522;Name=DAZ1
HG00140_chrY	CAT	transcript	23400181	23472224	100	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_G0000522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=HG00140_ch_T0001522;Name=DAZ1
HG00140_chrY	CAT	exon	23400181	23400393	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=exon:HG00140_ch_T0001522:0;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23400391	23400393	.	+	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001522:0;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	23400391	23400393	.	+	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=start_codon:HG00140_ch_T0001522;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23400394	23406994	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=intron:HG00140_ch_T0001522:0;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23406995	23407141	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=exon:HG00140_ch_T0001522:1;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23406995	23407141	.	+	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001522:1;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23407142	23407415	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=intron:HG00140_ch_T0001522:1;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23407416	23407507	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=exon:HG00140_ch_T0001522:2;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23407416	23407507	.	+	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001522:2;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23407508	23408067	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=intron:HG00140_ch_T0001522:2;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23408068	23408119	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=exon:HG00140_ch_T0001522:3;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23408068	23408119	.	+	1	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001522:3;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23408120	23408555	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=intron:HG00140_ch_T0001522:3;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23408556	23408619	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=exon:HG00140_ch_T0001522:4;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23408556	23408619	.	+	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001522:4;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23408620	23408708	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=intron:HG00140_ch_T0001522:4;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23408709	23408848	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=exon:HG00140_ch_T0001522:5;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23408709	23408848	.	+	2	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001522:5;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23408849	23431940	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=intron:HG00140_ch_T0001522:5;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23431941	23432012	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=exon:HG00140_ch_T0001522:6;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23431941	23432012	.	+	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001522:6;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23432013	23434385	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=intron:HG00140_ch_T0001522:6;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23434386	23434457	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=exon:HG00140_ch_T0001522:7;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23434386	23434457	.	+	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001522:7;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23434458	23436776	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=intron:HG00140_ch_T0001522:7;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23436777	23436848	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=exon:HG00140_ch_T0001522:8;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23436777	23436848	.	+	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001522:8;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23436849	23439172	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=intron:HG00140_ch_T0001522:8;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23439173	23439244	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=exon:HG00140_ch_T0001522:9;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23439173	23439244	.	+	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001522:9;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23439245	23441558	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=intron:HG00140_ch_T0001522:9;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23441559	23441630	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=exon:HG00140_ch_T0001522:10;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23441559	23441630	.	+	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001522:10;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23441631	23443954	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=intron:HG00140_ch_T0001522:10;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23443955	23444026	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=exon:HG00140_ch_T0001522:11;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23443955	23444026	.	+	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001522:11;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23444027	23446331	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=intron:HG00140_ch_T0001522:11;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23446332	23446403	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=exon:HG00140_ch_T0001522:12;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23446332	23446403	.	+	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001522:12;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23446404	23460887	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=intron:HG00140_ch_T0001522:12;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23460888	23460959	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=exon:HG00140_ch_T0001522:13;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23460888	23460959	.	+	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001522:13;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23460960	23461704	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=intron:HG00140_ch_T0001522:13;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23461705	23461739	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=exon:HG00140_ch_T0001522:14;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23461705	23461739	.	+	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001522:14;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23461740	23466312	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=intron:HG00140_ch_T0001522:14;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23466313	23466411	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=exon:HG00140_ch_T0001522:15;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23466313	23466376	.	+	1	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001522:15;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	23466374	23466376	.	+	0	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=stop_codon:HG00140_ch_T0001522;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23466412	23470374	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=intron:HG00140_ch_T0001522:15;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23470375	23472224	.	+	.	source_transcript=ENST00000540248.5;source_transcript_name=DAZ1-204;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000540248.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000540248.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001522;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001522;transcript_name=HG00140_ch_T0001522;gene_name=DAZ1;ID=exon:HG00140_ch_T0001522:16;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	23400183	23472231	100	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_G0000522;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=HG00140_ch_T0001523;Name=DAZ1
HG00140_chrY	CAT	exon	23400183	23400393	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=exon:HG00140_ch_T0001523:0;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23400391	23400393	.	+	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001523:0;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	23400391	23400393	.	+	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=start_codon:HG00140_ch_T0001523;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23400394	23406994	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=intron:HG00140_ch_T0001523:0;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23406995	23407141	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=exon:HG00140_ch_T0001523:1;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23406995	23407141	.	+	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001523:1;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23407142	23407415	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=intron:HG00140_ch_T0001523:1;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23407416	23407507	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=exon:HG00140_ch_T0001523:2;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23407416	23407507	.	+	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001523:2;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23407508	23408067	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=intron:HG00140_ch_T0001523:2;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23408068	23408119	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=exon:HG00140_ch_T0001523:3;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23408068	23408119	.	+	1	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001523:3;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23408120	23408555	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=intron:HG00140_ch_T0001523:3;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23408556	23408619	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=exon:HG00140_ch_T0001523:4;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23408556	23408619	.	+	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001523:4;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23408620	23408708	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=intron:HG00140_ch_T0001523:4;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23408709	23408848	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=exon:HG00140_ch_T0001523:5;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23408709	23408848	.	+	2	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001523:5;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23408849	23417842	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=intron:HG00140_ch_T0001523:5;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23417843	23417989	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=exon:HG00140_ch_T0001523:6;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23417843	23417989	.	+	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001523:6;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23417990	23418263	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=intron:HG00140_ch_T0001523:6;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23418264	23418355	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=exon:HG00140_ch_T0001523:7;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23418264	23418355	.	+	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001523:7;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23418356	23418915	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=intron:HG00140_ch_T0001523:7;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23418916	23418967	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=exon:HG00140_ch_T0001523:8;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23418916	23418967	.	+	1	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001523:8;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23418968	23419403	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=intron:HG00140_ch_T0001523:8;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23419404	23419467	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=exon:HG00140_ch_T0001523:9;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23419404	23419467	.	+	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001523:9;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23419468	23419556	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=intron:HG00140_ch_T0001523:9;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23419557	23419696	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=exon:HG00140_ch_T0001523:10;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23419557	23419696	.	+	2	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001523:10;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23419697	23428686	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=intron:HG00140_ch_T0001523:10;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23428687	23428833	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=exon:HG00140_ch_T0001523:11;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23428687	23428833	.	+	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001523:11;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23428834	23429107	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=intron:HG00140_ch_T0001523:11;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23429108	23429199	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=exon:HG00140_ch_T0001523:12;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23429108	23429199	.	+	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001523:12;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23429200	23429759	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=intron:HG00140_ch_T0001523:12;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23429760	23429811	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=exon:HG00140_ch_T0001523:13;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23429760	23429811	.	+	1	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001523:13;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23429812	23430247	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=intron:HG00140_ch_T0001523:13;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23430248	23430311	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=exon:HG00140_ch_T0001523:14;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23430248	23430311	.	+	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001523:14;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23430312	23430400	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=intron:HG00140_ch_T0001523:14;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23430401	23430540	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=exon:HG00140_ch_T0001523:15;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23430401	23430540	.	+	2	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001523:15;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23430541	23431940	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=intron:HG00140_ch_T0001523:15;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23431941	23432012	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=exon:HG00140_ch_T0001523:16;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23431941	23432012	.	+	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001523:16;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23432013	23434385	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=intron:HG00140_ch_T0001523:16;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23434386	23434457	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=exon:HG00140_ch_T0001523:17;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23434386	23434457	.	+	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001523:17;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23434458	23436776	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=intron:HG00140_ch_T0001523:17;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23436777	23436848	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=exon:HG00140_ch_T0001523:18;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23436777	23436848	.	+	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001523:18;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23436849	23439172	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=intron:HG00140_ch_T0001523:18;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23439173	23439244	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=exon:HG00140_ch_T0001523:19;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23439173	23439244	.	+	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001523:19;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23439245	23441558	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=intron:HG00140_ch_T0001523:19;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23441559	23441630	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=exon:HG00140_ch_T0001523:20;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23441559	23441630	.	+	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001523:20;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23441631	23443954	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=intron:HG00140_ch_T0001523:20;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23443955	23444026	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=exon:HG00140_ch_T0001523:21;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23443955	23444026	.	+	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001523:21;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23444027	23446331	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=intron:HG00140_ch_T0001523:21;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23446332	23446403	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=exon:HG00140_ch_T0001523:22;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23446332	23446403	.	+	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001523:22;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23446404	23458502	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=intron:HG00140_ch_T0001523:22;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23458503	23458574	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=exon:HG00140_ch_T0001523:23;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23458503	23458574	.	+	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001523:23;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23458575	23460887	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=intron:HG00140_ch_T0001523:23;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23460888	23460959	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=exon:HG00140_ch_T0001523:24;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23460888	23460959	.	+	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001523:24;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23460960	23461704	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=intron:HG00140_ch_T0001523:24;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23461705	23461739	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=exon:HG00140_ch_T0001523:25;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23461705	23461739	.	+	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001523:25;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23461740	23466312	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=intron:HG00140_ch_T0001523:25;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23466313	23466411	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=exon:HG00140_ch_T0001523:26;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23466313	23466376	.	+	1	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001523:26;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	23466374	23466376	.	+	0	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=stop_codon:HG00140_ch_T0001523;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23466412	23470374	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=intron:HG00140_ch_T0001523:26;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23470375	23472231	.	+	.	source_transcript=ENST00000405239.6;source_transcript_name=DAZ1-201;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000405239.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000405239.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001523;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001523;transcript_name=HG00140_ch_T0001523;gene_name=DAZ1;ID=exon:HG00140_ch_T0001523:27;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	23400183	23470876	100	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001524;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_G0000522;transcript_name=HG00140_ch_T0001524;gene_name=DAZ1;ID=HG00140_ch_T0001524;Name=DAZ1
HG00140_chrY	CAT	exon	23400183	23400393	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001524;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001524;transcript_name=HG00140_ch_T0001524;gene_name=DAZ1;ID=exon:HG00140_ch_T0001524:0;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23400391	23400393	.	+	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001524;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001524;transcript_name=HG00140_ch_T0001524;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001524:0;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	23400391	23400393	.	+	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001524;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001524;transcript_name=HG00140_ch_T0001524;gene_name=DAZ1;ID=start_codon:HG00140_ch_T0001524;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23400394	23406994	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001524;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001524;transcript_name=HG00140_ch_T0001524;gene_name=DAZ1;ID=intron:HG00140_ch_T0001524:0;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23406995	23407141	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001524;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001524;transcript_name=HG00140_ch_T0001524;gene_name=DAZ1;ID=exon:HG00140_ch_T0001524:1;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23406995	23407141	.	+	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001524;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001524;transcript_name=HG00140_ch_T0001524;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001524:1;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23407142	23407415	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001524;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001524;transcript_name=HG00140_ch_T0001524;gene_name=DAZ1;ID=intron:HG00140_ch_T0001524:1;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23407416	23407507	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001524;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001524;transcript_name=HG00140_ch_T0001524;gene_name=DAZ1;ID=exon:HG00140_ch_T0001524:2;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23407416	23407507	.	+	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001524;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001524;transcript_name=HG00140_ch_T0001524;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001524:2;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23407508	23408067	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001524;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001524;transcript_name=HG00140_ch_T0001524;gene_name=DAZ1;ID=intron:HG00140_ch_T0001524:2;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23408068	23408119	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001524;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001524;transcript_name=HG00140_ch_T0001524;gene_name=DAZ1;ID=exon:HG00140_ch_T0001524:3;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23408068	23408119	.	+	1	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001524;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001524;transcript_name=HG00140_ch_T0001524;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001524:3;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23408120	23408555	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001524;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001524;transcript_name=HG00140_ch_T0001524;gene_name=DAZ1;ID=intron:HG00140_ch_T0001524:3;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23408556	23408619	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001524;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001524;transcript_name=HG00140_ch_T0001524;gene_name=DAZ1;ID=exon:HG00140_ch_T0001524:4;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23408556	23408619	.	+	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001524;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001524;transcript_name=HG00140_ch_T0001524;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001524:4;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23408620	23408708	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001524;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001524;transcript_name=HG00140_ch_T0001524;gene_name=DAZ1;ID=intron:HG00140_ch_T0001524:4;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23408709	23408848	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001524;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001524;transcript_name=HG00140_ch_T0001524;gene_name=DAZ1;ID=exon:HG00140_ch_T0001524:5;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23408709	23408848	.	+	2	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001524;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001524;transcript_name=HG00140_ch_T0001524;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001524:5;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23408849	23431940	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001524;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001524;transcript_name=HG00140_ch_T0001524;gene_name=DAZ1;ID=intron:HG00140_ch_T0001524:5;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23431941	23432012	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001524;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001524;transcript_name=HG00140_ch_T0001524;gene_name=DAZ1;ID=exon:HG00140_ch_T0001524:6;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23431941	23432012	.	+	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001524;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001524;transcript_name=HG00140_ch_T0001524;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001524:6;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23432013	23434385	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001524;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001524;transcript_name=HG00140_ch_T0001524;gene_name=DAZ1;ID=intron:HG00140_ch_T0001524:6;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23434386	23434457	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001524;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001524;transcript_name=HG00140_ch_T0001524;gene_name=DAZ1;ID=exon:HG00140_ch_T0001524:7;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23434386	23434457	.	+	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001524;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001524;transcript_name=HG00140_ch_T0001524;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001524:7;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23434458	23436776	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001524;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001524;transcript_name=HG00140_ch_T0001524;gene_name=DAZ1;ID=intron:HG00140_ch_T0001524:7;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23436777	23436848	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001524;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001524;transcript_name=HG00140_ch_T0001524;gene_name=DAZ1;ID=exon:HG00140_ch_T0001524:8;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23436777	23436848	.	+	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001524;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001524;transcript_name=HG00140_ch_T0001524;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001524:8;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23436849	23441558	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001524;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001524;transcript_name=HG00140_ch_T0001524;gene_name=DAZ1;ID=intron:HG00140_ch_T0001524:8;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23441559	23441630	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001524;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001524;transcript_name=HG00140_ch_T0001524;gene_name=DAZ1;ID=exon:HG00140_ch_T0001524:9;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23441559	23441630	.	+	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001524;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001524;transcript_name=HG00140_ch_T0001524;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001524:9;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23441631	23446331	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001524;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001524;transcript_name=HG00140_ch_T0001524;gene_name=DAZ1;ID=intron:HG00140_ch_T0001524:9;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23446332	23446403	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001524;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001524;transcript_name=HG00140_ch_T0001524;gene_name=DAZ1;ID=exon:HG00140_ch_T0001524:10;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23446332	23446403	.	+	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001524;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001524;transcript_name=HG00140_ch_T0001524;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001524:10;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23446404	23458502	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001524;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001524;transcript_name=HG00140_ch_T0001524;gene_name=DAZ1;ID=intron:HG00140_ch_T0001524:10;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23458503	23458574	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001524;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001524;transcript_name=HG00140_ch_T0001524;gene_name=DAZ1;ID=exon:HG00140_ch_T0001524:11;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23458503	23458574	.	+	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001524;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001524;transcript_name=HG00140_ch_T0001524;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001524:11;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23458575	23460887	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001524;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001524;transcript_name=HG00140_ch_T0001524;gene_name=DAZ1;ID=intron:HG00140_ch_T0001524:11;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23460888	23460959	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001524;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001524;transcript_name=HG00140_ch_T0001524;gene_name=DAZ1;ID=exon:HG00140_ch_T0001524:12;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23460888	23460959	.	+	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001524;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001524;transcript_name=HG00140_ch_T0001524;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001524:12;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23460960	23461704	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001524;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001524;transcript_name=HG00140_ch_T0001524;gene_name=DAZ1;ID=intron:HG00140_ch_T0001524:12;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23461705	23461739	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001524;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001524;transcript_name=HG00140_ch_T0001524;gene_name=DAZ1;ID=exon:HG00140_ch_T0001524:13;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23461705	23461739	.	+	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001524;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001524;transcript_name=HG00140_ch_T0001524;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001524:13;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23461740	23466312	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001524;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001524;transcript_name=HG00140_ch_T0001524;gene_name=DAZ1;ID=intron:HG00140_ch_T0001524:13;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23466313	23466411	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001524;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001524;transcript_name=HG00140_ch_T0001524;gene_name=DAZ1;ID=exon:HG00140_ch_T0001524:14;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	23466313	23466376	.	+	1	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001524;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001524;transcript_name=HG00140_ch_T0001524;gene_name=DAZ1;ID=CDS:HG00140_ch_T0001524:14;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	23466374	23466376	.	+	0	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001524;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001524;transcript_name=HG00140_ch_T0001524;gene_name=DAZ1;ID=stop_codon:HG00140_ch_T0001524;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23466412	23470374	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001524;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001524;transcript_name=HG00140_ch_T0001524;gene_name=DAZ1;ID=intron:HG00140_ch_T0001524:14;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23470375	23470876	.	+	.	source_transcript=ENST00000426000.6;source_transcript_name=DAZ1-202;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000426000.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000426000.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001524;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001524;transcript_name=HG00140_ch_T0001524;gene_name=DAZ1;ID=exon:HG00140_ch_T0001524:15;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	23460773	23472223	1000	+	.	source_transcript=ENST00000466332.1;source_transcript_name=DAZ1-203;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466332.1;transcript_score=299.955;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001525;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_G0000522;transcript_name=HG00140_ch_T0001525;gene_name=DAZ1;ID=HG00140_ch_T0001525;Name=DAZ1
HG00140_chrY	CAT	exon	23460773	23460959	.	+	.	source_transcript=ENST00000466332.1;source_transcript_name=DAZ1-203;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466332.1;transcript_score=299.955;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001525;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001525;transcript_name=HG00140_ch_T0001525;gene_name=DAZ1;ID=exon:HG00140_ch_T0001525:0;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23460960	23461704	.	+	.	source_transcript=ENST00000466332.1;source_transcript_name=DAZ1-203;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466332.1;transcript_score=299.955;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001525;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001525;transcript_name=HG00140_ch_T0001525;gene_name=DAZ1;ID=intron:HG00140_ch_T0001525:0;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23461705	23461739	.	+	.	source_transcript=ENST00000466332.1;source_transcript_name=DAZ1-203;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466332.1;transcript_score=299.955;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001525;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001525;transcript_name=HG00140_ch_T0001525;gene_name=DAZ1;ID=exon:HG00140_ch_T0001525:1;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23461740	23463304	.	+	.	source_transcript=ENST00000466332.1;source_transcript_name=DAZ1-203;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466332.1;transcript_score=299.955;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001525;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001525;transcript_name=HG00140_ch_T0001525;gene_name=DAZ1;ID=intron:HG00140_ch_T0001525:1;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23463305	23463376	.	+	.	source_transcript=ENST00000466332.1;source_transcript_name=DAZ1-203;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466332.1;transcript_score=299.955;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001525;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001525;transcript_name=HG00140_ch_T0001525;gene_name=DAZ1;ID=exon:HG00140_ch_T0001525:2;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23463377	23466312	.	+	.	source_transcript=ENST00000466332.1;source_transcript_name=DAZ1-203;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466332.1;transcript_score=299.955;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001525;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001525;transcript_name=HG00140_ch_T0001525;gene_name=DAZ1;ID=intron:HG00140_ch_T0001525:2;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23466313	23466411	.	+	.	source_transcript=ENST00000466332.1;source_transcript_name=DAZ1-203;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466332.1;transcript_score=299.955;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001525;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001525;transcript_name=HG00140_ch_T0001525;gene_name=DAZ1;ID=exon:HG00140_ch_T0001525:3;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23466412	23470374	.	+	.	source_transcript=ENST00000466332.1;source_transcript_name=DAZ1-203;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466332.1;transcript_score=299.955;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001525;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001525;transcript_name=HG00140_ch_T0001525;gene_name=DAZ1;ID=intron:HG00140_ch_T0001525:3;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23470375	23472223	.	+	.	source_transcript=ENST00000466332.1;source_transcript_name=DAZ1-203;source_gene=ENSG00000188120.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000188120.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000466332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000466332.1;transcript_score=299.955;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ1;transcript_id=HG00140_ch_T0001525;gene_id=HG00140_ch_G0000522;Parent=HG00140_ch_T0001525;transcript_name=HG00140_ch_T0001525;gene_name=DAZ1;ID=exon:HG00140_ch_T0001525:4;Name=DAZ1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	23560346	23573559	.	+	.	source_gene_common_name=PPP1R12BP2;source_gene=ENSG00000205936.3_1;gene_id=HG00140_ch_G0000523;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=PPP1R12BP2;gene_sources=liftoff;ID=HG00140_ch_G0000523;Name=PPP1R12BP2
HG00140_chrY	CAT	transcript	23560346	23573559	1000	+	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=HG00140_ch_T0001526;gene_id=HG00140_ch_G0000523;Parent=HG00140_ch_G0000523;transcript_name=HG00140_ch_T0001526;gene_name=PPP1R12BP2;ID=HG00140_ch_T0001526;Name=PPP1R12BP2
HG00140_chrY	CAT	exon	23560346	23560435	.	+	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=HG00140_ch_T0001526;gene_id=HG00140_ch_G0000523;Parent=HG00140_ch_T0001526;transcript_name=HG00140_ch_T0001526;gene_name=PPP1R12BP2;ID=exon:HG00140_ch_T0001526:0;Name=PPP1R12BP2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23560436	23569852	.	+	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=HG00140_ch_T0001526;gene_id=HG00140_ch_G0000523;Parent=HG00140_ch_T0001526;transcript_name=HG00140_ch_T0001526;gene_name=PPP1R12BP2;ID=intron:HG00140_ch_T0001526:0;Name=PPP1R12BP2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23569853	23570056	.	+	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=HG00140_ch_T0001526;gene_id=HG00140_ch_G0000523;Parent=HG00140_ch_T0001526;transcript_name=HG00140_ch_T0001526;gene_name=PPP1R12BP2;ID=exon:HG00140_ch_T0001526:1;Name=PPP1R12BP2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23570057	23572026	.	+	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=HG00140_ch_T0001526;gene_id=HG00140_ch_G0000523;Parent=HG00140_ch_T0001526;transcript_name=HG00140_ch_T0001526;gene_name=PPP1R12BP2;ID=intron:HG00140_ch_T0001526:1;Name=PPP1R12BP2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23572027	23572216	.	+	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=HG00140_ch_T0001526;gene_id=HG00140_ch_G0000523;Parent=HG00140_ch_T0001526;transcript_name=HG00140_ch_T0001526;gene_name=PPP1R12BP2;ID=exon:HG00140_ch_T0001526:2;Name=PPP1R12BP2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23572217	23572304	.	+	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=HG00140_ch_T0001526;gene_id=HG00140_ch_G0000523;Parent=HG00140_ch_T0001526;transcript_name=HG00140_ch_T0001526;gene_name=PPP1R12BP2;ID=intron:HG00140_ch_T0001526:2;Name=PPP1R12BP2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23572305	23572417	.	+	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=HG00140_ch_T0001526;gene_id=HG00140_ch_G0000523;Parent=HG00140_ch_T0001526;transcript_name=HG00140_ch_T0001526;gene_name=PPP1R12BP2;ID=exon:HG00140_ch_T0001526:3;Name=PPP1R12BP2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23572418	23573517	.	+	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=HG00140_ch_T0001526;gene_id=HG00140_ch_G0000523;Parent=HG00140_ch_T0001526;transcript_name=HG00140_ch_T0001526;gene_name=PPP1R12BP2;ID=intron:HG00140_ch_T0001526:3;Name=PPP1R12BP2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23573518	23573559	.	+	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3_1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3_1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=HG00140_ch_T0001526;gene_id=HG00140_ch_G0000523;Parent=HG00140_ch_T0001526;transcript_name=HG00140_ch_T0001526;gene_name=PPP1R12BP2;ID=exon:HG00140_ch_T0001526:4;Name=PPP1R12BP2;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	23603961	23604098	.	-	.	source_gene_common_name=SNORA70;source_gene=ENSG00000251796.1;alternative_source_transcripts=ENST00000516116.1,ENST00000516116.1;gene_id=HG00140_ch_G0000524;gene_biotype=snoRNA;gene_name=SNORA70;gene_sources=liftoff;ID=HG00140_ch_G0000524;Name=SNORA70
HG00140_chrY	CAT	transcript	23603961	23604098	1000	-	.	source_transcript=ENST00000515987.1;source_transcript_name=SNORA70.11-201;source_gene=ENSG00000251796.1;source_gene_biotype=snoRNA;original_gene_id=ENSG00000251796.1;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=ENST00000515987.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515987.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SNORA70;alternative_source_transcripts=ENST00000516116.1,ENST00000516116.1;transcript_id=HG00140_ch_T0001527;gene_id=HG00140_ch_G0000524;Parent=HG00140_ch_G0000524;transcript_name=HG00140_ch_T0001527;gene_name=SNORA70;ID=HG00140_ch_T0001527;Name=SNORA70
HG00140_chrY	CAT	exon	23603961	23604098	.	-	.	source_transcript=ENST00000515987.1;source_transcript_name=SNORA70.11-201;source_gene=ENSG00000251796.1;source_gene_biotype=snoRNA;original_gene_id=ENSG00000251796.1;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=ENST00000515987.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000515987.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SNORA70;alternative_source_transcripts=ENST00000516116.1,ENST00000516116.1;transcript_id=HG00140_ch_T0001527;gene_id=HG00140_ch_G0000524;Parent=HG00140_ch_T0001527;transcript_name=HG00140_ch_T0001527;gene_name=SNORA70;ID=exon:HG00140_ch_T0001527:0;Name=SNORA70;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	23606909	23607131	.	+	.	source_gene_common_name=ENSG00000225876;source_gene=ENSG00000225876.1;gene_id=HG00140_ch_G0000525;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000225876;gene_sources=liftoff;ID=HG00140_ch_G0000525;Name=ENSG00000225876
HG00140_chrY	CAT	transcript	23606909	23607131	1000	+	.	source_transcript=ENST00000426199.1;source_transcript_name=ENST00000426199;source_gene=ENSG00000225876.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225876.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426199.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000225876;transcript_id=HG00140_ch_T0001528;gene_id=HG00140_ch_G0000525;Parent=HG00140_ch_G0000525;transcript_name=HG00140_ch_T0001528;gene_name=ENSG00000225876;ID=HG00140_ch_T0001528;Name=ENSG00000225876
HG00140_chrY	CAT	exon	23606909	23607131	.	+	.	source_transcript=ENST00000426199.1;source_transcript_name=ENST00000426199;source_gene=ENSG00000225876.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225876.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426199.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000225876;transcript_id=HG00140_ch_T0001528;gene_id=HG00140_ch_G0000525;Parent=HG00140_ch_T0001528;transcript_name=HG00140_ch_T0001528;gene_name=ENSG00000225876;ID=exon:HG00140_ch_T0001528:0;Name=ENSG00000225876;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	23616765	23616866	.	+	.	source_gene_common_name=ENSG00000289705;source_gene=ENSG00000289705.1;alternative_source_transcripts=ENST00000662956.1,ENST00000662956.1;gene_id=HG00140_ch_G0000526;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000289705;gene_sources=liftoff;ID=HG00140_ch_G0000526;Name=ENSG00000289705
HG00140_chrY	CAT	transcript	23616765	23616866	1000	+	.	source_transcript=ENST00000696462.1;source_transcript_name=ENST00000696462;source_gene=ENSG00000289705.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000289705.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000696462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696462.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289705;alternative_source_transcripts=ENST00000662956.1,ENST00000662956.1;transcript_id=HG00140_ch_T0001529;gene_id=HG00140_ch_G0000526;Parent=HG00140_ch_G0000526;transcript_name=HG00140_ch_T0001529;gene_name=ENSG00000289705;ID=HG00140_ch_T0001529;Name=ENSG00000289705
HG00140_chrY	CAT	exon	23616765	23616866	.	+	.	source_transcript=ENST00000696462.1;source_transcript_name=ENST00000696462;source_gene=ENSG00000289705.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000289705.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000696462.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000696462.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000289705;alternative_source_transcripts=ENST00000662956.1,ENST00000662956.1;transcript_id=HG00140_ch_T0001529;gene_id=HG00140_ch_G0000526;Parent=HG00140_ch_T0001529;transcript_name=HG00140_ch_T0001529;gene_name=ENSG00000289705;ID=exon:HG00140_ch_T0001529:0;Name=ENSG00000289705;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	23643324	23653141	.	+	.	source_gene_common_name=REREP2Y;source_gene=ENSG00000235014.1;gene_id=HG00140_ch_G0000527;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=REREP2Y;gene_sources=liftoff;ID=HG00140_ch_G0000527;Name=REREP2Y
HG00140_chrY	CAT	transcript	23643324	23653141	1000	+	.	source_transcript=ENST00000439103.1;source_transcript_name=REREP2Y-201;source_gene=ENSG00000235014.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235014.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000439103.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439103.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;transcript_id=HG00140_ch_T0001530;gene_id=HG00140_ch_G0000527;Parent=HG00140_ch_G0000527;transcript_name=HG00140_ch_T0001530;gene_name=REREP2Y;ID=HG00140_ch_T0001530;Name=REREP2Y
HG00140_chrY	CAT	exon	23643324	23643396	.	+	.	source_transcript=ENST00000439103.1;source_transcript_name=REREP2Y-201;source_gene=ENSG00000235014.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235014.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000439103.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;transcript_id=HG00140_ch_T0001530;gene_id=HG00140_ch_G0000527;Parent=HG00140_ch_T0001530;transcript_name=HG00140_ch_T0001530;gene_name=REREP2Y;ID=exon:HG00140_ch_T0001530:0;Name=REREP2Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23643397	23653014	.	+	.	source_transcript=ENST00000439103.1;source_transcript_name=REREP2Y-201;source_gene=ENSG00000235014.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235014.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000439103.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;transcript_id=HG00140_ch_T0001530;gene_id=HG00140_ch_G0000527;Parent=HG00140_ch_T0001530;transcript_name=HG00140_ch_T0001530;gene_name=REREP2Y;ID=intron:HG00140_ch_T0001530:0;Name=REREP2Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23653015	23653141	.	+	.	source_transcript=ENST00000439103.1;source_transcript_name=REREP2Y-201;source_gene=ENSG00000235014.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235014.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000439103.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;transcript_id=HG00140_ch_T0001530;gene_id=HG00140_ch_G0000527;Parent=HG00140_ch_T0001530;transcript_name=HG00140_ch_T0001530;gene_name=REREP2Y;ID=exon:HG00140_ch_T0001530:1;Name=REREP2Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	23802346	23804333	.	+	.	source_gene_common_name=RBMY2DP;source_gene=ENSG00000215507.11;gene_id=HG00140_ch_G0000528;gene_biotype=transcribed_processed_pseudogene;gene_name=RBMY2DP;gene_sources=transMap_pairwise;ID=HG00140_ch_G0000528;Name=RBMY2DP
HG00140_chrY	CAT	transcript	23802346	23804333	1000	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=HG00140_ch_T0001531;gene_id=HG00140_ch_G0000528;Parent=HG00140_ch_G0000528;transcript_name=HG00140_ch_T0001531;gene_name=RBMY2DP;ID=HG00140_ch_T0001531;Name=RBMY2DP
HG00140_chrY	CAT	exon	23802346	23802460	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=HG00140_ch_T0001531;gene_id=HG00140_ch_G0000528;Parent=HG00140_ch_T0001531;transcript_name=HG00140_ch_T0001531;gene_name=RBMY2DP;ID=exon:HG00140_ch_T0001531:0;Name=RBMY2DP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23802461	23803329	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=HG00140_ch_T0001531;gene_id=HG00140_ch_G0000528;Parent=HG00140_ch_T0001531;transcript_name=HG00140_ch_T0001531;gene_name=RBMY2DP;ID=intron:HG00140_ch_T0001531:0;Name=RBMY2DP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23803330	23803440	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=HG00140_ch_T0001531;gene_id=HG00140_ch_G0000528;Parent=HG00140_ch_T0001531;transcript_name=HG00140_ch_T0001531;gene_name=RBMY2DP;ID=exon:HG00140_ch_T0001531:1;Name=RBMY2DP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23803441	23803522	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=HG00140_ch_T0001531;gene_id=HG00140_ch_G0000528;Parent=HG00140_ch_T0001531;transcript_name=HG00140_ch_T0001531;gene_name=RBMY2DP;ID=intron:HG00140_ch_T0001531:1;Name=RBMY2DP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23803523	23803610	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=HG00140_ch_T0001531;gene_id=HG00140_ch_G0000528;Parent=HG00140_ch_T0001531;transcript_name=HG00140_ch_T0001531;gene_name=RBMY2DP;ID=exon:HG00140_ch_T0001531:2;Name=RBMY2DP;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23803611	23804034	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=HG00140_ch_T0001531;gene_id=HG00140_ch_G0000528;Parent=HG00140_ch_T0001531;transcript_name=HG00140_ch_T0001531;gene_name=RBMY2DP;ID=intron:HG00140_ch_T0001531:2;Name=RBMY2DP;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23804035	23804333	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=transMap_pairwise;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;transcript_id=HG00140_ch_T0001531;gene_id=HG00140_ch_G0000528;Parent=HG00140_ch_T0001531;transcript_name=HG00140_ch_T0001531;gene_name=RBMY2DP;ID=exon:HG00140_ch_T0001531:3;Name=RBMY2DP;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	23809310	23976899	.	-	.	source_gene_common_name=ENSG00000305624;source_gene=ENSG00000305624.1;gene_id=HG00140_ch_G0000529;gene_biotype=lncRNA;gene_name=ENSG00000305624;gene_sources=liftoff;ID=HG00140_ch_G0000529;Name=ENSG00000305624
HG00140_chrY	CAT	transcript	23809310	23897661	1000	-	.	source_transcript=ENST00000812042.1;source_transcript_name=ENST00000812042;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812042.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001532;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_G0000529;transcript_name=HG00140_ch_T0001532;gene_name=ENSG00000305624;ID=HG00140_ch_T0001532;Name=ENSG00000305624
HG00140_chrY	CAT	exon	23809310	23809488	.	-	.	source_transcript=ENST00000812042.1;source_transcript_name=ENST00000812042;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001532;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001532;transcript_name=HG00140_ch_T0001532;gene_name=ENSG00000305624;ID=exon:HG00140_ch_T0001532:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23809489	23816066	.	-	.	source_transcript=ENST00000812042.1;source_transcript_name=ENST00000812042;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001532;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001532;transcript_name=HG00140_ch_T0001532;gene_name=ENSG00000305624;ID=intron:HG00140_ch_T0001532:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23816067	23816161	.	-	.	source_transcript=ENST00000812042.1;source_transcript_name=ENST00000812042;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001532;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001532;transcript_name=HG00140_ch_T0001532;gene_name=ENSG00000305624;ID=exon:HG00140_ch_T0001532:1;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23816162	23816271	.	-	.	source_transcript=ENST00000812042.1;source_transcript_name=ENST00000812042;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001532;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001532;transcript_name=HG00140_ch_T0001532;gene_name=ENSG00000305624;ID=intron:HG00140_ch_T0001532:1;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23816272	23816417	.	-	.	source_transcript=ENST00000812042.1;source_transcript_name=ENST00000812042;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001532;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001532;transcript_name=HG00140_ch_T0001532;gene_name=ENSG00000305624;ID=exon:HG00140_ch_T0001532:2;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23816418	23816503	.	-	.	source_transcript=ENST00000812042.1;source_transcript_name=ENST00000812042;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001532;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001532;transcript_name=HG00140_ch_T0001532;gene_name=ENSG00000305624;ID=intron:HG00140_ch_T0001532:2;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23816504	23816619	.	-	.	source_transcript=ENST00000812042.1;source_transcript_name=ENST00000812042;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001532;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001532;transcript_name=HG00140_ch_T0001532;gene_name=ENSG00000305624;ID=exon:HG00140_ch_T0001532:3;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23816620	23841277	.	-	.	source_transcript=ENST00000812042.1;source_transcript_name=ENST00000812042;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001532;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001532;transcript_name=HG00140_ch_T0001532;gene_name=ENSG00000305624;ID=intron:HG00140_ch_T0001532:3;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23841278	23841321	.	-	.	source_transcript=ENST00000812042.1;source_transcript_name=ENST00000812042;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001532;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001532;transcript_name=HG00140_ch_T0001532;gene_name=ENSG00000305624;ID=exon:HG00140_ch_T0001532:4;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23841322	23879079	.	-	.	source_transcript=ENST00000812042.1;source_transcript_name=ENST00000812042;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001532;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001532;transcript_name=HG00140_ch_T0001532;gene_name=ENSG00000305624;ID=intron:HG00140_ch_T0001532:4;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23879080	23879152	.	-	.	source_transcript=ENST00000812042.1;source_transcript_name=ENST00000812042;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001532;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001532;transcript_name=HG00140_ch_T0001532;gene_name=ENSG00000305624;ID=exon:HG00140_ch_T0001532:5;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23879153	23897509	.	-	.	source_transcript=ENST00000812042.1;source_transcript_name=ENST00000812042;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001532;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001532;transcript_name=HG00140_ch_T0001532;gene_name=ENSG00000305624;ID=intron:HG00140_ch_T0001532:5;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23897510	23897661	.	-	.	source_transcript=ENST00000812042.1;source_transcript_name=ENST00000812042;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812042.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812042.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001532;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001532;transcript_name=HG00140_ch_T0001532;gene_name=ENSG00000305624;ID=exon:HG00140_ch_T0001532:6;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	23809310	23897677	1000	-	.	source_transcript=ENST00000812041.1;source_transcript_name=ENST00000812041;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812041.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001533;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_G0000529;transcript_name=HG00140_ch_T0001533;gene_name=ENSG00000305624;ID=HG00140_ch_T0001533;Name=ENSG00000305624
HG00140_chrY	CAT	exon	23809310	23809488	.	-	.	source_transcript=ENST00000812041.1;source_transcript_name=ENST00000812041;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001533;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001533;transcript_name=HG00140_ch_T0001533;gene_name=ENSG00000305624;ID=exon:HG00140_ch_T0001533:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23809489	23879079	.	-	.	source_transcript=ENST00000812041.1;source_transcript_name=ENST00000812041;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001533;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001533;transcript_name=HG00140_ch_T0001533;gene_name=ENSG00000305624;ID=intron:HG00140_ch_T0001533:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23879080	23879152	.	-	.	source_transcript=ENST00000812041.1;source_transcript_name=ENST00000812041;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001533;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001533;transcript_name=HG00140_ch_T0001533;gene_name=ENSG00000305624;ID=exon:HG00140_ch_T0001533:1;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23879153	23897509	.	-	.	source_transcript=ENST00000812041.1;source_transcript_name=ENST00000812041;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001533;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001533;transcript_name=HG00140_ch_T0001533;gene_name=ENSG00000305624;ID=intron:HG00140_ch_T0001533:1;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23897510	23897677	.	-	.	source_transcript=ENST00000812041.1;source_transcript_name=ENST00000812041;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812041.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812041.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001533;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001533;transcript_name=HG00140_ch_T0001533;gene_name=ENSG00000305624;ID=exon:HG00140_ch_T0001533:2;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	23838999	23906367	1000	-	.	source_transcript=ENST00000812043.1;source_transcript_name=ENST00000812043;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812043.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001535;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_G0000529;transcript_name=HG00140_ch_T0001535;gene_name=ENSG00000305624;ID=HG00140_ch_T0001535;Name=ENSG00000305624
HG00140_chrY	CAT	exon	23838999	23839677	.	-	.	source_transcript=ENST00000812043.1;source_transcript_name=ENST00000812043;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001535;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001535;transcript_name=HG00140_ch_T0001535;gene_name=ENSG00000305624;ID=exon:HG00140_ch_T0001535:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23839678	23841277	.	-	.	source_transcript=ENST00000812043.1;source_transcript_name=ENST00000812043;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001535;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001535;transcript_name=HG00140_ch_T0001535;gene_name=ENSG00000305624;ID=intron:HG00140_ch_T0001535:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23841278	23841321	.	-	.	source_transcript=ENST00000812043.1;source_transcript_name=ENST00000812043;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001535;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001535;transcript_name=HG00140_ch_T0001535;gene_name=ENSG00000305624;ID=exon:HG00140_ch_T0001535:1;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23841322	23869014	.	-	.	source_transcript=ENST00000812043.1;source_transcript_name=ENST00000812043;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001535;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001535;transcript_name=HG00140_ch_T0001535;gene_name=ENSG00000305624;ID=intron:HG00140_ch_T0001535:1;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23869015	23869461	.	-	.	source_transcript=ENST00000812043.1;source_transcript_name=ENST00000812043;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001535;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001535;transcript_name=HG00140_ch_T0001535;gene_name=ENSG00000305624;ID=exon:HG00140_ch_T0001535:2;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23869462	23879079	.	-	.	source_transcript=ENST00000812043.1;source_transcript_name=ENST00000812043;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001535;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001535;transcript_name=HG00140_ch_T0001535;gene_name=ENSG00000305624;ID=intron:HG00140_ch_T0001535:2;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23879080	23879152	.	-	.	source_transcript=ENST00000812043.1;source_transcript_name=ENST00000812043;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001535;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001535;transcript_name=HG00140_ch_T0001535;gene_name=ENSG00000305624;ID=exon:HG00140_ch_T0001535:3;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23879153	23905978	.	-	.	source_transcript=ENST00000812043.1;source_transcript_name=ENST00000812043;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001535;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001535;transcript_name=HG00140_ch_T0001535;gene_name=ENSG00000305624;ID=intron:HG00140_ch_T0001535:3;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23905979	23906367	.	-	.	source_transcript=ENST00000812043.1;source_transcript_name=ENST00000812043;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812043.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812043.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001535;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001535;transcript_name=HG00140_ch_T0001535;gene_name=ENSG00000305624;ID=exon:HG00140_ch_T0001535:4;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	23840907	23897665	1000	-	.	source_transcript=ENST00000812044.1;source_transcript_name=ENST00000812044;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812044.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001536;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_G0000529;transcript_name=HG00140_ch_T0001536;gene_name=ENSG00000305624;ID=HG00140_ch_T0001536;Name=ENSG00000305624
HG00140_chrY	CAT	exon	23840907	23841321	.	-	.	source_transcript=ENST00000812044.1;source_transcript_name=ENST00000812044;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001536;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001536;transcript_name=HG00140_ch_T0001536;gene_name=ENSG00000305624;ID=exon:HG00140_ch_T0001536:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23841322	23869334	.	-	.	source_transcript=ENST00000812044.1;source_transcript_name=ENST00000812044;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001536;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001536;transcript_name=HG00140_ch_T0001536;gene_name=ENSG00000305624;ID=intron:HG00140_ch_T0001536:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23869335	23869461	.	-	.	source_transcript=ENST00000812044.1;source_transcript_name=ENST00000812044;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001536;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001536;transcript_name=HG00140_ch_T0001536;gene_name=ENSG00000305624;ID=exon:HG00140_ch_T0001536:1;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23869462	23879079	.	-	.	source_transcript=ENST00000812044.1;source_transcript_name=ENST00000812044;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001536;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001536;transcript_name=HG00140_ch_T0001536;gene_name=ENSG00000305624;ID=intron:HG00140_ch_T0001536:1;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23879080	23879152	.	-	.	source_transcript=ENST00000812044.1;source_transcript_name=ENST00000812044;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001536;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001536;transcript_name=HG00140_ch_T0001536;gene_name=ENSG00000305624;ID=exon:HG00140_ch_T0001536:2;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23879153	23897509	.	-	.	source_transcript=ENST00000812044.1;source_transcript_name=ENST00000812044;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001536;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001536;transcript_name=HG00140_ch_T0001536;gene_name=ENSG00000305624;ID=intron:HG00140_ch_T0001536:2;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23897510	23897665	.	-	.	source_transcript=ENST00000812044.1;source_transcript_name=ENST00000812044;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812044.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812044.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001536;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001536;transcript_name=HG00140_ch_T0001536;gene_name=ENSG00000305624;ID=exon:HG00140_ch_T0001536:3;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	23876609	23897660	1000	-	.	source_transcript=ENST00000812046.1;source_transcript_name=ENST00000812046;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812046.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001538;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_G0000529;transcript_name=HG00140_ch_T0001538;gene_name=ENSG00000305624;ID=HG00140_ch_T0001538;Name=ENSG00000305624
HG00140_chrY	CAT	exon	23876609	23877235	.	-	.	source_transcript=ENST00000812046.1;source_transcript_name=ENST00000812046;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001538;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001538;transcript_name=HG00140_ch_T0001538;gene_name=ENSG00000305624;ID=exon:HG00140_ch_T0001538:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23877236	23879079	.	-	.	source_transcript=ENST00000812046.1;source_transcript_name=ENST00000812046;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001538;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001538;transcript_name=HG00140_ch_T0001538;gene_name=ENSG00000305624;ID=intron:HG00140_ch_T0001538:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23879080	23879152	.	-	.	source_transcript=ENST00000812046.1;source_transcript_name=ENST00000812046;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001538;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001538;transcript_name=HG00140_ch_T0001538;gene_name=ENSG00000305624;ID=exon:HG00140_ch_T0001538:1;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23879153	23884767	.	-	.	source_transcript=ENST00000812046.1;source_transcript_name=ENST00000812046;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001538;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001538;transcript_name=HG00140_ch_T0001538;gene_name=ENSG00000305624;ID=intron:HG00140_ch_T0001538:1;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23884768	23884784	.	-	.	source_transcript=ENST00000812046.1;source_transcript_name=ENST00000812046;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001538;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001538;transcript_name=HG00140_ch_T0001538;gene_name=ENSG00000305624;ID=exon:HG00140_ch_T0001538:2;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23884785	23897509	.	-	.	source_transcript=ENST00000812046.1;source_transcript_name=ENST00000812046;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001538;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001538;transcript_name=HG00140_ch_T0001538;gene_name=ENSG00000305624;ID=intron:HG00140_ch_T0001538:2;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23897510	23897660	.	-	.	source_transcript=ENST00000812046.1;source_transcript_name=ENST00000812046;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812046.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812046.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001538;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001538;transcript_name=HG00140_ch_T0001538;gene_name=ENSG00000305624;ID=exon:HG00140_ch_T0001538:3;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	23876609	23897705	1000	-	.	source_transcript=ENST00000812045.1;source_transcript_name=ENST00000812045;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812045.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001539;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_G0000529;transcript_name=HG00140_ch_T0001539;gene_name=ENSG00000305624;ID=HG00140_ch_T0001539;Name=ENSG00000305624
HG00140_chrY	CAT	exon	23876609	23877235	.	-	.	source_transcript=ENST00000812045.1;source_transcript_name=ENST00000812045;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001539;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001539;transcript_name=HG00140_ch_T0001539;gene_name=ENSG00000305624;ID=exon:HG00140_ch_T0001539:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23877236	23879079	.	-	.	source_transcript=ENST00000812045.1;source_transcript_name=ENST00000812045;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001539;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001539;transcript_name=HG00140_ch_T0001539;gene_name=ENSG00000305624;ID=intron:HG00140_ch_T0001539:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23879080	23879152	.	-	.	source_transcript=ENST00000812045.1;source_transcript_name=ENST00000812045;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001539;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001539;transcript_name=HG00140_ch_T0001539;gene_name=ENSG00000305624;ID=exon:HG00140_ch_T0001539:1;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23879153	23897509	.	-	.	source_transcript=ENST00000812045.1;source_transcript_name=ENST00000812045;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001539;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001539;transcript_name=HG00140_ch_T0001539;gene_name=ENSG00000305624;ID=intron:HG00140_ch_T0001539:1;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23897510	23897705	.	-	.	source_transcript=ENST00000812045.1;source_transcript_name=ENST00000812045;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812045.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812045.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001539;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001539;transcript_name=HG00140_ch_T0001539;gene_name=ENSG00000305624;ID=exon:HG00140_ch_T0001539:2;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	23879080	23897687	1000	-	.	source_transcript=ENST00000812039.1;source_transcript_name=ENST00000812039;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812039.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001540;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_G0000529;transcript_name=HG00140_ch_T0001540;gene_name=ENSG00000305624;ID=HG00140_ch_T0001540;Name=ENSG00000305624
HG00140_chrY	CAT	exon	23879080	23879152	.	-	.	source_transcript=ENST00000812039.1;source_transcript_name=ENST00000812039;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001540;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001540;transcript_name=HG00140_ch_T0001540;gene_name=ENSG00000305624;ID=exon:HG00140_ch_T0001540:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23879153	23897509	.	-	.	source_transcript=ENST00000812039.1;source_transcript_name=ENST00000812039;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001540;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001540;transcript_name=HG00140_ch_T0001540;gene_name=ENSG00000305624;ID=intron:HG00140_ch_T0001540:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23897510	23897687	.	-	.	source_transcript=ENST00000812039.1;source_transcript_name=ENST00000812039;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812039.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812039.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001540;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001540;transcript_name=HG00140_ch_T0001540;gene_name=ENSG00000305624;ID=exon:HG00140_ch_T0001540:1;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	23879080	23897679	1000	-	.	source_transcript=ENST00000812037.1;source_transcript_name=ENST00000812037;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812037.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001541;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_G0000529;transcript_name=HG00140_ch_T0001541;gene_name=ENSG00000305624;ID=HG00140_ch_T0001541;Name=ENSG00000305624
HG00140_chrY	CAT	exon	23879080	23879152	.	-	.	source_transcript=ENST00000812037.1;source_transcript_name=ENST00000812037;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001541;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001541;transcript_name=HG00140_ch_T0001541;gene_name=ENSG00000305624;ID=exon:HG00140_ch_T0001541:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23879153	23897509	.	-	.	source_transcript=ENST00000812037.1;source_transcript_name=ENST00000812037;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001541;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001541;transcript_name=HG00140_ch_T0001541;gene_name=ENSG00000305624;ID=intron:HG00140_ch_T0001541:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23897510	23897679	.	-	.	source_transcript=ENST00000812037.1;source_transcript_name=ENST00000812037;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812037.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812037.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001541;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001541;transcript_name=HG00140_ch_T0001541;gene_name=ENSG00000305624;ID=exon:HG00140_ch_T0001541:1;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	23879080	23906373	1000	-	.	source_transcript=ENST00000812035.1;source_transcript_name=ENST00000812035;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812035.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001542;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_G0000529;transcript_name=HG00140_ch_T0001542;gene_name=ENSG00000305624;ID=HG00140_ch_T0001542;Name=ENSG00000305624
HG00140_chrY	CAT	exon	23879080	23879152	.	-	.	source_transcript=ENST00000812035.1;source_transcript_name=ENST00000812035;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001542;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001542;transcript_name=HG00140_ch_T0001542;gene_name=ENSG00000305624;ID=exon:HG00140_ch_T0001542:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23879153	23905978	.	-	.	source_transcript=ENST00000812035.1;source_transcript_name=ENST00000812035;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001542;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001542;transcript_name=HG00140_ch_T0001542;gene_name=ENSG00000305624;ID=intron:HG00140_ch_T0001542:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23905979	23906373	.	-	.	source_transcript=ENST00000812035.1;source_transcript_name=ENST00000812035;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812035.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812035.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001542;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001542;transcript_name=HG00140_ch_T0001542;gene_name=ENSG00000305624;ID=exon:HG00140_ch_T0001542:1;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	23879080	23897740	1000	-	.	source_transcript=ENST00000812036.1;source_transcript_name=ENST00000812036;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812036.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001543;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_G0000529;transcript_name=HG00140_ch_T0001543;gene_name=ENSG00000305624;ID=HG00140_ch_T0001543;Name=ENSG00000305624
HG00140_chrY	CAT	exon	23879080	23879152	.	-	.	source_transcript=ENST00000812036.1;source_transcript_name=ENST00000812036;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001543;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001543;transcript_name=HG00140_ch_T0001543;gene_name=ENSG00000305624;ID=exon:HG00140_ch_T0001543:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23879153	23897509	.	-	.	source_transcript=ENST00000812036.1;source_transcript_name=ENST00000812036;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001543;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001543;transcript_name=HG00140_ch_T0001543;gene_name=ENSG00000305624;ID=intron:HG00140_ch_T0001543:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23897510	23897740	.	-	.	source_transcript=ENST00000812036.1;source_transcript_name=ENST00000812036;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812036.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812036.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001543;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001543;transcript_name=HG00140_ch_T0001543;gene_name=ENSG00000305624;ID=exon:HG00140_ch_T0001543:1;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	23879080	23976899	1000	-	.	source_transcript=ENST00000812034.1;source_transcript_name=ENST00000812034;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812034.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001544;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_G0000529;transcript_name=HG00140_ch_T0001544;gene_name=ENSG00000305624;ID=HG00140_ch_T0001544;Name=ENSG00000305624
HG00140_chrY	CAT	exon	23879080	23879152	.	-	.	source_transcript=ENST00000812034.1;source_transcript_name=ENST00000812034;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001544;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001544;transcript_name=HG00140_ch_T0001544;gene_name=ENSG00000305624;ID=exon:HG00140_ch_T0001544:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23879153	23948926	.	-	.	source_transcript=ENST00000812034.1;source_transcript_name=ENST00000812034;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001544;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001544;transcript_name=HG00140_ch_T0001544;gene_name=ENSG00000305624;ID=intron:HG00140_ch_T0001544:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23948927	23948968	.	-	.	source_transcript=ENST00000812034.1;source_transcript_name=ENST00000812034;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001544;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001544;transcript_name=HG00140_ch_T0001544;gene_name=ENSG00000305624;ID=exon:HG00140_ch_T0001544:1;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23948969	23950068	.	-	.	source_transcript=ENST00000812034.1;source_transcript_name=ENST00000812034;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001544;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001544;transcript_name=HG00140_ch_T0001544;gene_name=ENSG00000305624;ID=intron:HG00140_ch_T0001544:1;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23950069	23950181	.	-	.	source_transcript=ENST00000812034.1;source_transcript_name=ENST00000812034;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001544;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001544;transcript_name=HG00140_ch_T0001544;gene_name=ENSG00000305624;ID=exon:HG00140_ch_T0001544:2;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23950182	23950269	.	-	.	source_transcript=ENST00000812034.1;source_transcript_name=ENST00000812034;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001544;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001544;transcript_name=HG00140_ch_T0001544;gene_name=ENSG00000305624;ID=intron:HG00140_ch_T0001544:2;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23950270	23950459	.	-	.	source_transcript=ENST00000812034.1;source_transcript_name=ENST00000812034;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001544;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001544;transcript_name=HG00140_ch_T0001544;gene_name=ENSG00000305624;ID=exon:HG00140_ch_T0001544:3;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23950460	23952429	.	-	.	source_transcript=ENST00000812034.1;source_transcript_name=ENST00000812034;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001544;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001544;transcript_name=HG00140_ch_T0001544;gene_name=ENSG00000305624;ID=intron:HG00140_ch_T0001544:3;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23952430	23952633	.	-	.	source_transcript=ENST00000812034.1;source_transcript_name=ENST00000812034;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001544;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001544;transcript_name=HG00140_ch_T0001544;gene_name=ENSG00000305624;ID=exon:HG00140_ch_T0001544:4;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23952634	23962050	.	-	.	source_transcript=ENST00000812034.1;source_transcript_name=ENST00000812034;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001544;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001544;transcript_name=HG00140_ch_T0001544;gene_name=ENSG00000305624;ID=intron:HG00140_ch_T0001544:4;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23962051	23962140	.	-	.	source_transcript=ENST00000812034.1;source_transcript_name=ENST00000812034;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001544;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001544;transcript_name=HG00140_ch_T0001544;gene_name=ENSG00000305624;ID=exon:HG00140_ch_T0001544:5;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23962141	23976756	.	-	.	source_transcript=ENST00000812034.1;source_transcript_name=ENST00000812034;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001544;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001544;transcript_name=HG00140_ch_T0001544;gene_name=ENSG00000305624;ID=intron:HG00140_ch_T0001544:5;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23976757	23976899	.	-	.	source_transcript=ENST00000812034.1;source_transcript_name=ENST00000812034;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812034.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812034.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001544;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001544;transcript_name=HG00140_ch_T0001544;gene_name=ENSG00000305624;ID=exon:HG00140_ch_T0001544:6;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	23879080	23897603	1000	-	.	source_transcript=ENST00000812040.1;source_transcript_name=ENST00000812040;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812040.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001545;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_G0000529;transcript_name=HG00140_ch_T0001545;gene_name=ENSG00000305624;ID=HG00140_ch_T0001545;Name=ENSG00000305624
HG00140_chrY	CAT	exon	23879080	23879152	.	-	.	source_transcript=ENST00000812040.1;source_transcript_name=ENST00000812040;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001545;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001545;transcript_name=HG00140_ch_T0001545;gene_name=ENSG00000305624;ID=exon:HG00140_ch_T0001545:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23879153	23884767	.	-	.	source_transcript=ENST00000812040.1;source_transcript_name=ENST00000812040;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001545;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001545;transcript_name=HG00140_ch_T0001545;gene_name=ENSG00000305624;ID=intron:HG00140_ch_T0001545:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23884768	23884784	.	-	.	source_transcript=ENST00000812040.1;source_transcript_name=ENST00000812040;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001545;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001545;transcript_name=HG00140_ch_T0001545;gene_name=ENSG00000305624;ID=exon:HG00140_ch_T0001545:1;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23884785	23897509	.	-	.	source_transcript=ENST00000812040.1;source_transcript_name=ENST00000812040;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001545;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001545;transcript_name=HG00140_ch_T0001545;gene_name=ENSG00000305624;ID=intron:HG00140_ch_T0001545:1;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23897510	23897603	.	-	.	source_transcript=ENST00000812040.1;source_transcript_name=ENST00000812040;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812040.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812040.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001545;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001545;transcript_name=HG00140_ch_T0001545;gene_name=ENSG00000305624;ID=exon:HG00140_ch_T0001545:2;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	23879080	23897661	1000	-	.	source_transcript=ENST00000812038.1;source_transcript_name=ENST00000812038;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812038.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001546;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_G0000529;transcript_name=HG00140_ch_T0001546;gene_name=ENSG00000305624;ID=HG00140_ch_T0001546;Name=ENSG00000305624
HG00140_chrY	CAT	exon	23879080	23879152	.	-	.	source_transcript=ENST00000812038.1;source_transcript_name=ENST00000812038;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001546;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001546;transcript_name=HG00140_ch_T0001546;gene_name=ENSG00000305624;ID=exon:HG00140_ch_T0001546:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23879153	23884767	.	-	.	source_transcript=ENST00000812038.1;source_transcript_name=ENST00000812038;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001546;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001546;transcript_name=HG00140_ch_T0001546;gene_name=ENSG00000305624;ID=intron:HG00140_ch_T0001546:0;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23884768	23884784	.	-	.	source_transcript=ENST00000812038.1;source_transcript_name=ENST00000812038;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001546;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001546;transcript_name=HG00140_ch_T0001546;gene_name=ENSG00000305624;ID=exon:HG00140_ch_T0001546:1;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23884785	23897509	.	-	.	source_transcript=ENST00000812038.1;source_transcript_name=ENST00000812038;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001546;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001546;transcript_name=HG00140_ch_T0001546;gene_name=ENSG00000305624;ID=intron:HG00140_ch_T0001546:1;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23897510	23897661	.	-	.	source_transcript=ENST00000812038.1;source_transcript_name=ENST00000812038;source_gene=ENSG00000305624.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305624.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812038.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812038.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305624;transcript_id=HG00140_ch_T0001546;gene_id=HG00140_ch_G0000529;Parent=HG00140_ch_T0001546;transcript_name=HG00140_ch_T0001546;gene_name=ENSG00000305624;ID=exon:HG00140_ch_T0001546:2;Name=ENSG00000305624;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	23816272	23818320	.	-	.	source_gene_common_name=ENSG00000230073;source_gene=ENSG00000230073.1;gene_id=HG00140_ch_G0000530;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000230073;gene_sources=liftoff;ID=HG00140_ch_G0000530;Name=ENSG00000230073
HG00140_chrY	CAT	transcript	23816272	23818320	1000	-	.	source_transcript=ENST00000444350.1;source_transcript_name=ENST00000444350;source_gene=ENSG00000230073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444350.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444350.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230073;transcript_id=HG00140_ch_T0001534;gene_id=HG00140_ch_G0000530;Parent=HG00140_ch_G0000530;transcript_name=HG00140_ch_T0001534;gene_name=ENSG00000230073;ID=HG00140_ch_T0001534;Name=ENSG00000230073
HG00140_chrY	CAT	exon	23816272	23816415	.	-	.	source_transcript=ENST00000444350.1;source_transcript_name=ENST00000444350;source_gene=ENSG00000230073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444350.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444350.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230073;transcript_id=HG00140_ch_T0001534;gene_id=HG00140_ch_G0000530;Parent=HG00140_ch_T0001534;transcript_name=HG00140_ch_T0001534;gene_name=ENSG00000230073;ID=exon:HG00140_ch_T0001534:0;Name=ENSG00000230073;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23816416	23816507	.	-	.	source_transcript=ENST00000444350.1;source_transcript_name=ENST00000444350;source_gene=ENSG00000230073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444350.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444350.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230073;transcript_id=HG00140_ch_T0001534;gene_id=HG00140_ch_G0000530;Parent=HG00140_ch_T0001534;transcript_name=HG00140_ch_T0001534;gene_name=ENSG00000230073;ID=intron:HG00140_ch_T0001534:0;Name=ENSG00000230073;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23816508	23816631	.	-	.	source_transcript=ENST00000444350.1;source_transcript_name=ENST00000444350;source_gene=ENSG00000230073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444350.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444350.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230073;transcript_id=HG00140_ch_T0001534;gene_id=HG00140_ch_G0000530;Parent=HG00140_ch_T0001534;transcript_name=HG00140_ch_T0001534;gene_name=ENSG00000230073;ID=exon:HG00140_ch_T0001534:1;Name=ENSG00000230073;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23816632	23816831	.	-	.	source_transcript=ENST00000444350.1;source_transcript_name=ENST00000444350;source_gene=ENSG00000230073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444350.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444350.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230073;transcript_id=HG00140_ch_T0001534;gene_id=HG00140_ch_G0000530;Parent=HG00140_ch_T0001534;transcript_name=HG00140_ch_T0001534;gene_name=ENSG00000230073;ID=intron:HG00140_ch_T0001534:1;Name=ENSG00000230073;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23816832	23816888	.	-	.	source_transcript=ENST00000444350.1;source_transcript_name=ENST00000444350;source_gene=ENSG00000230073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444350.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444350.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230073;transcript_id=HG00140_ch_T0001534;gene_id=HG00140_ch_G0000530;Parent=HG00140_ch_T0001534;transcript_name=HG00140_ch_T0001534;gene_name=ENSG00000230073;ID=exon:HG00140_ch_T0001534:2;Name=ENSG00000230073;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23816889	23817918	.	-	.	source_transcript=ENST00000444350.1;source_transcript_name=ENST00000444350;source_gene=ENSG00000230073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444350.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444350.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230073;transcript_id=HG00140_ch_T0001534;gene_id=HG00140_ch_G0000530;Parent=HG00140_ch_T0001534;transcript_name=HG00140_ch_T0001534;gene_name=ENSG00000230073;ID=intron:HG00140_ch_T0001534:2;Name=ENSG00000230073;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23817919	23818320	.	-	.	source_transcript=ENST00000444350.1;source_transcript_name=ENST00000444350;source_gene=ENSG00000230073.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000230073.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000444350.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444350.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230073;transcript_id=HG00140_ch_T0001534;gene_id=HG00140_ch_G0000530;Parent=HG00140_ch_T0001534;transcript_name=HG00140_ch_T0001534;gene_name=ENSG00000230073;ID=exon:HG00140_ch_T0001534:3;Name=ENSG00000230073;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	23869335	23879150	.	-	.	source_gene_common_name=REREP1Y;source_gene=ENSG00000225189.1;gene_id=HG00140_ch_G0000531;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=REREP1Y;gene_sources=liftoff;ID=HG00140_ch_G0000531;Name=REREP1Y
HG00140_chrY	CAT	transcript	23869335	23879150	1000	-	.	source_transcript=ENST00000422655.1;source_transcript_name=REREP1Y-201;source_gene=ENSG00000225189.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225189.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000422655.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422655.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;transcript_id=HG00140_ch_T0001537;gene_id=HG00140_ch_G0000531;Parent=HG00140_ch_G0000531;transcript_name=HG00140_ch_T0001537;gene_name=REREP1Y;ID=HG00140_ch_T0001537;Name=REREP1Y
HG00140_chrY	CAT	exon	23869335	23869461	.	-	.	source_transcript=ENST00000422655.1;source_transcript_name=REREP1Y-201;source_gene=ENSG00000225189.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225189.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000422655.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422655.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;transcript_id=HG00140_ch_T0001537;gene_id=HG00140_ch_G0000531;Parent=HG00140_ch_T0001537;transcript_name=HG00140_ch_T0001537;gene_name=REREP1Y;ID=exon:HG00140_ch_T0001537:0;Name=REREP1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23869462	23879079	.	-	.	source_transcript=ENST00000422655.1;source_transcript_name=REREP1Y-201;source_gene=ENSG00000225189.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225189.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000422655.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422655.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;transcript_id=HG00140_ch_T0001537;gene_id=HG00140_ch_G0000531;Parent=HG00140_ch_T0001537;transcript_name=HG00140_ch_T0001537;gene_name=REREP1Y;ID=intron:HG00140_ch_T0001537:0;Name=REREP1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23879080	23879150	.	-	.	source_transcript=ENST00000422655.1;source_transcript_name=REREP1Y-201;source_gene=ENSG00000225189.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225189.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000422655.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422655.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;transcript_id=HG00140_ch_T0001537;gene_id=HG00140_ch_G0000531;Parent=HG00140_ch_T0001537;transcript_name=HG00140_ch_T0001537;gene_name=REREP1Y;ID=exon:HG00140_ch_T0001537:1;Name=REREP1Y;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	23905617	23905718	.	-	.	source_gene_common_name=ENSG00000286744;source_gene=ENSG00000286744.1;alternative_source_transcripts=ENST00000696462.1,ENST00000696462.1;gene_id=HG00140_ch_G0000532;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000286744;gene_sources=liftoff;ID=HG00140_ch_G0000532;Name=ENSG00000286744
HG00140_chrY	CAT	transcript	23905617	23905718	1000	-	.	source_transcript=ENST00000662956.1;source_transcript_name=ENST00000662956;source_gene=ENSG00000286744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000286744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000662956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662956.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286744;alternative_source_transcripts=ENST00000696462.1,ENST00000696462.1;transcript_id=HG00140_ch_T0001547;gene_id=HG00140_ch_G0000532;Parent=HG00140_ch_G0000532;transcript_name=HG00140_ch_T0001547;gene_name=ENSG00000286744;ID=HG00140_ch_T0001547;Name=ENSG00000286744
HG00140_chrY	CAT	exon	23905617	23905718	.	-	.	source_transcript=ENST00000662956.1;source_transcript_name=ENST00000662956;source_gene=ENSG00000286744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000286744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000662956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000662956.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000286744;alternative_source_transcripts=ENST00000696462.1,ENST00000696462.1;transcript_id=HG00140_ch_T0001547;gene_id=HG00140_ch_G0000532;Parent=HG00140_ch_T0001547;transcript_name=HG00140_ch_T0001547;gene_name=ENSG00000286744;ID=exon:HG00140_ch_T0001547:0;Name=ENSG00000286744;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	23918389	23918526	.	+	.	source_gene_common_name=SNORA70;source_gene=ENSG00000251925.1;alternative_source_transcripts=ENST00000515987.1,ENST00000515987.1;gene_id=HG00140_ch_G0000533;gene_biotype=snoRNA;gene_name=SNORA70;gene_sources=liftoff;ID=HG00140_ch_G0000533;Name=SNORA70
HG00140_chrY	CAT	transcript	23918389	23918526	1000	+	.	source_transcript=ENST00000516116.1;source_transcript_name=SNORA70.13-201;source_gene=ENSG00000251925.1;source_gene_biotype=snoRNA;original_gene_id=ENSG00000251925.1;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=ENST00000516116.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516116.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SNORA70;alternative_source_transcripts=ENST00000515987.1,ENST00000515987.1;transcript_id=HG00140_ch_T0001548;gene_id=HG00140_ch_G0000533;Parent=HG00140_ch_G0000533;transcript_name=HG00140_ch_T0001548;gene_name=SNORA70;ID=HG00140_ch_T0001548;Name=SNORA70
HG00140_chrY	CAT	exon	23918389	23918526	.	+	.	source_transcript=ENST00000516116.1;source_transcript_name=SNORA70.13-201;source_gene=ENSG00000251925.1;source_gene_biotype=snoRNA;original_gene_id=ENSG00000251925.1;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=ENST00000516116.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516116.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SNORA70;alternative_source_transcripts=ENST00000515987.1,ENST00000515987.1;transcript_id=HG00140_ch_T0001548;gene_id=HG00140_ch_G0000533;Parent=HG00140_ch_T0001548;transcript_name=HG00140_ch_T0001548;gene_name=SNORA70;ID=exon:HG00140_ch_T0001548:0;Name=SNORA70;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	23948927	23962140	.	-	.	source_gene_common_name=PPP1R12BP2;source_gene=ENSG00000205936.3;gene_id=HG00140_ch_G0000534;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=PPP1R12BP2;gene_sources=liftoff;ID=HG00140_ch_G0000534;Name=PPP1R12BP2
HG00140_chrY	CAT	transcript	23948927	23962140	1000	-	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=HG00140_ch_T0001549;gene_id=HG00140_ch_G0000534;Parent=HG00140_ch_G0000534;transcript_name=HG00140_ch_T0001549;gene_name=PPP1R12BP2;ID=HG00140_ch_T0001549;Name=PPP1R12BP2
HG00140_chrY	CAT	exon	23948927	23948968	.	-	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=HG00140_ch_T0001549;gene_id=HG00140_ch_G0000534;Parent=HG00140_ch_T0001549;transcript_name=HG00140_ch_T0001549;gene_name=PPP1R12BP2;ID=exon:HG00140_ch_T0001549:0;Name=PPP1R12BP2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23948969	23950068	.	-	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=HG00140_ch_T0001549;gene_id=HG00140_ch_G0000534;Parent=HG00140_ch_T0001549;transcript_name=HG00140_ch_T0001549;gene_name=PPP1R12BP2;ID=intron:HG00140_ch_T0001549:0;Name=PPP1R12BP2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23950069	23950181	.	-	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=HG00140_ch_T0001549;gene_id=HG00140_ch_G0000534;Parent=HG00140_ch_T0001549;transcript_name=HG00140_ch_T0001549;gene_name=PPP1R12BP2;ID=exon:HG00140_ch_T0001549:1;Name=PPP1R12BP2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23950182	23950269	.	-	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=HG00140_ch_T0001549;gene_id=HG00140_ch_G0000534;Parent=HG00140_ch_T0001549;transcript_name=HG00140_ch_T0001549;gene_name=PPP1R12BP2;ID=intron:HG00140_ch_T0001549:1;Name=PPP1R12BP2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23950270	23950459	.	-	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=HG00140_ch_T0001549;gene_id=HG00140_ch_G0000534;Parent=HG00140_ch_T0001549;transcript_name=HG00140_ch_T0001549;gene_name=PPP1R12BP2;ID=exon:HG00140_ch_T0001549:2;Name=PPP1R12BP2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23950460	23952429	.	-	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=HG00140_ch_T0001549;gene_id=HG00140_ch_G0000534;Parent=HG00140_ch_T0001549;transcript_name=HG00140_ch_T0001549;gene_name=PPP1R12BP2;ID=intron:HG00140_ch_T0001549:2;Name=PPP1R12BP2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23952430	23952633	.	-	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=HG00140_ch_T0001549;gene_id=HG00140_ch_G0000534;Parent=HG00140_ch_T0001549;transcript_name=HG00140_ch_T0001549;gene_name=PPP1R12BP2;ID=exon:HG00140_ch_T0001549:3;Name=PPP1R12BP2;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	23952634	23962050	.	-	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=HG00140_ch_T0001549;gene_id=HG00140_ch_G0000534;Parent=HG00140_ch_T0001549;transcript_name=HG00140_ch_T0001549;gene_name=PPP1R12BP2;ID=intron:HG00140_ch_T0001549:3;Name=PPP1R12BP2;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	23962051	23962140	.	-	.	source_transcript=ENST00000416956.1;source_transcript_name=PPP1R12BP2-201;source_gene=ENSG00000205936.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000205936.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000416956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP1R12BP2;transcript_id=HG00140_ch_T0001549;gene_id=HG00140_ch_G0000534;Parent=HG00140_ch_T0001549;transcript_name=HG00140_ch_T0001549;gene_name=PPP1R12BP2;ID=exon:HG00140_ch_T0001549:4;Name=PPP1R12BP2;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	24031990	24032093	.	+	.	source_gene_common_name=RNU6-1314P;source_gene=ENSG00000252948.1;alternative_source_transcripts=ENST00000517139.1,ENST00000517139.1;gene_id=HG00140_ch_G0000535;gene_biotype=snRNA;gene_name=RNU6-1314P;gene_sources=liftoff;ID=HG00140_ch_G0000535;Name=RNU6-1314P
HG00140_chrY	CAT	transcript	24031990	24032093	1000	+	.	source_transcript=ENST00000517139.1;source_transcript_name=RNU6-1314P-201;source_gene=ENSG00000252948.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252948.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000517139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000517139.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-1314P;alternative_source_transcripts=ENST00000517139.1,ENST00000517139.1;transcript_id=HG00140_ch_T0001550;gene_id=HG00140_ch_G0000535;Parent=HG00140_ch_G0000535;transcript_name=HG00140_ch_T0001550;gene_name=RNU6-1314P;ID=HG00140_ch_T0001550;Name=RNU6-1314P
HG00140_chrY	CAT	exon	24031990	24032093	.	+	.	source_transcript=ENST00000517139.1;source_transcript_name=RNU6-1314P-201;source_gene=ENSG00000252948.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252948.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000517139.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000517139.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU6-1314P;alternative_source_transcripts=ENST00000517139.1,ENST00000517139.1;transcript_id=HG00140_ch_T0001550;gene_id=HG00140_ch_G0000535;Parent=HG00140_ch_T0001550;transcript_name=HG00140_ch_T0001550;gene_name=RNU6-1314P;ID=exon:HG00140_ch_T0001550:0;Name=RNU6-1314P;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	24071613	24072232	.	+	.	source_gene_common_name=CYCSP48;source_gene=ENSG00000233843.1;alternative_source_transcripts=ENST00000417124.1,ENST00000417124.1;gene_id=HG00140_ch_G0000536;gene_biotype=processed_pseudogene;gene_name=CYCSP48;gene_sources=liftoff;ID=HG00140_ch_G0000536;Name=CYCSP48
HG00140_chrY	CAT	transcript	24071613	24072232	1000	+	.	source_transcript=ENST00000417124.1;source_transcript_name=CYCSP48-201;source_gene=ENSG00000233843.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233843.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000417124.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417124.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CYCSP48;alternative_source_transcripts=ENST00000417124.1,ENST00000417124.1;transcript_id=HG00140_ch_T0001551;gene_id=HG00140_ch_G0000536;Parent=HG00140_ch_G0000536;transcript_name=HG00140_ch_T0001551;gene_name=CYCSP48;ID=HG00140_ch_T0001551;Name=CYCSP48
HG00140_chrY	CAT	exon	24071613	24071663	.	+	.	source_transcript=ENST00000417124.1;source_transcript_name=CYCSP48-201;source_gene=ENSG00000233843.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233843.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000417124.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417124.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CYCSP48;alternative_source_transcripts=ENST00000417124.1,ENST00000417124.1;transcript_id=HG00140_ch_T0001551;gene_id=HG00140_ch_G0000536;Parent=HG00140_ch_T0001551;transcript_name=HG00140_ch_T0001551;gene_name=CYCSP48;ID=exon:HG00140_ch_T0001551:0;Name=CYCSP48;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24071664	24071960	.	+	.	source_transcript=ENST00000417124.1;source_transcript_name=CYCSP48-201;source_gene=ENSG00000233843.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233843.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000417124.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417124.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CYCSP48;alternative_source_transcripts=ENST00000417124.1,ENST00000417124.1;transcript_id=HG00140_ch_T0001551;gene_id=HG00140_ch_G0000536;Parent=HG00140_ch_T0001551;transcript_name=HG00140_ch_T0001551;gene_name=CYCSP48;ID=intron:HG00140_ch_T0001551:0;Name=CYCSP48;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24071961	24072232	.	+	.	source_transcript=ENST00000417124.1;source_transcript_name=CYCSP48-201;source_gene=ENSG00000233843.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233843.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000417124.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417124.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CYCSP48;alternative_source_transcripts=ENST00000417124.1,ENST00000417124.1;transcript_id=HG00140_ch_T0001551;gene_id=HG00140_ch_G0000536;Parent=HG00140_ch_T0001551;transcript_name=HG00140_ch_T0001551;gene_name=CYCSP48;ID=exon:HG00140_ch_T0001551:1;Name=CYCSP48;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	24080161	24179303	.	+	.	source_gene_common_name=ENSG00000294742;source_gene=ENSG00000294742.1;gene_id=HG00140_ch_G0000537;gene_biotype=lncRNA;gene_name=ENSG00000294742;gene_sources=liftoff;ID=HG00140_ch_G0000537;Name=ENSG00000294742
HG00140_chrY	CAT	transcript	24080161	24125136	1000	+	.	source_transcript=ENST00000725548.1;source_transcript_name=ENST00000725548;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725548.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725548.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001552;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_G0000537;transcript_name=HG00140_ch_T0001552;gene_name=ENSG00000294742;ID=HG00140_ch_T0001552;Name=ENSG00000294742
HG00140_chrY	CAT	exon	24080161	24080253	.	+	.	source_transcript=ENST00000725548.1;source_transcript_name=ENST00000725548;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725548.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725548.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001552;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001552;transcript_name=HG00140_ch_T0001552;gene_name=ENSG00000294742;ID=exon:HG00140_ch_T0001552:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24080254	24080701	.	+	.	source_transcript=ENST00000725548.1;source_transcript_name=ENST00000725548;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725548.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725548.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001552;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001552;transcript_name=HG00140_ch_T0001552;gene_name=ENSG00000294742;ID=intron:HG00140_ch_T0001552:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24080702	24080948	.	+	.	source_transcript=ENST00000725548.1;source_transcript_name=ENST00000725548;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725548.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725548.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001552;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001552;transcript_name=HG00140_ch_T0001552;gene_name=ENSG00000294742;ID=exon:HG00140_ch_T0001552:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24080949	24107981	.	+	.	source_transcript=ENST00000725548.1;source_transcript_name=ENST00000725548;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725548.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725548.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001552;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001552;transcript_name=HG00140_ch_T0001552;gene_name=ENSG00000294742;ID=intron:HG00140_ch_T0001552:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24107982	24108010	.	+	.	source_transcript=ENST00000725548.1;source_transcript_name=ENST00000725548;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725548.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725548.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001552;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001552;transcript_name=HG00140_ch_T0001552;gene_name=ENSG00000294742;ID=exon:HG00140_ch_T0001552:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24108011	24108104	.	+	.	source_transcript=ENST00000725548.1;source_transcript_name=ENST00000725548;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725548.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725548.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001552;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001552;transcript_name=HG00140_ch_T0001552;gene_name=ENSG00000294742;ID=intron:HG00140_ch_T0001552:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24108105	24108177	.	+	.	source_transcript=ENST00000725548.1;source_transcript_name=ENST00000725548;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725548.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725548.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001552;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001552;transcript_name=HG00140_ch_T0001552;gene_name=ENSG00000294742;ID=exon:HG00140_ch_T0001552:3;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24108178	24125032	.	+	.	source_transcript=ENST00000725548.1;source_transcript_name=ENST00000725548;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725548.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725548.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001552;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001552;transcript_name=HG00140_ch_T0001552;gene_name=ENSG00000294742;ID=intron:HG00140_ch_T0001552:3;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24125033	24125136	.	+	.	source_transcript=ENST00000725548.1;source_transcript_name=ENST00000725548;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725548.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725548.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001552;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001552;transcript_name=HG00140_ch_T0001552;gene_name=ENSG00000294742;ID=exon:HG00140_ch_T0001552:4;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	24080177	24110055	1000	+	.	source_transcript=ENST00000725551.1;source_transcript_name=ENST00000725551;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725551.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725551.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001553;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_G0000537;transcript_name=HG00140_ch_T0001553;gene_name=ENSG00000294742;ID=HG00140_ch_T0001553;Name=ENSG00000294742
HG00140_chrY	CAT	exon	24080177	24080253	.	+	.	source_transcript=ENST00000725551.1;source_transcript_name=ENST00000725551;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725551.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725551.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001553;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001553;transcript_name=HG00140_ch_T0001553;gene_name=ENSG00000294742;ID=exon:HG00140_ch_T0001553:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24080254	24080701	.	+	.	source_transcript=ENST00000725551.1;source_transcript_name=ENST00000725551;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725551.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725551.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001553;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001553;transcript_name=HG00140_ch_T0001553;gene_name=ENSG00000294742;ID=intron:HG00140_ch_T0001553:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24080702	24080948	.	+	.	source_transcript=ENST00000725551.1;source_transcript_name=ENST00000725551;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725551.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725551.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001553;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001553;transcript_name=HG00140_ch_T0001553;gene_name=ENSG00000294742;ID=exon:HG00140_ch_T0001553:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24080949	24107981	.	+	.	source_transcript=ENST00000725551.1;source_transcript_name=ENST00000725551;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725551.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725551.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001553;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001553;transcript_name=HG00140_ch_T0001553;gene_name=ENSG00000294742;ID=intron:HG00140_ch_T0001553:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24107982	24108010	.	+	.	source_transcript=ENST00000725551.1;source_transcript_name=ENST00000725551;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725551.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725551.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001553;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001553;transcript_name=HG00140_ch_T0001553;gene_name=ENSG00000294742;ID=exon:HG00140_ch_T0001553:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24108011	24109859	.	+	.	source_transcript=ENST00000725551.1;source_transcript_name=ENST00000725551;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725551.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725551.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001553;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001553;transcript_name=HG00140_ch_T0001553;gene_name=ENSG00000294742;ID=intron:HG00140_ch_T0001553:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24109860	24110055	.	+	.	source_transcript=ENST00000725551.1;source_transcript_name=ENST00000725551;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725551.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725551.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001553;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001553;transcript_name=HG00140_ch_T0001553;gene_name=ENSG00000294742;ID=exon:HG00140_ch_T0001553:3;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	24080182	24109989	1000	+	.	source_transcript=ENST00000725553.1;source_transcript_name=ENST00000725553;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725553.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001554;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_G0000537;transcript_name=HG00140_ch_T0001554;gene_name=ENSG00000294742;ID=HG00140_ch_T0001554;Name=ENSG00000294742
HG00140_chrY	CAT	exon	24080182	24080253	.	+	.	source_transcript=ENST00000725553.1;source_transcript_name=ENST00000725553;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725553.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001554;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001554;transcript_name=HG00140_ch_T0001554;gene_name=ENSG00000294742;ID=exon:HG00140_ch_T0001554:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24080254	24080701	.	+	.	source_transcript=ENST00000725553.1;source_transcript_name=ENST00000725553;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725553.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001554;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001554;transcript_name=HG00140_ch_T0001554;gene_name=ENSG00000294742;ID=intron:HG00140_ch_T0001554:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24080702	24080948	.	+	.	source_transcript=ENST00000725553.1;source_transcript_name=ENST00000725553;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725553.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001554;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001554;transcript_name=HG00140_ch_T0001554;gene_name=ENSG00000294742;ID=exon:HG00140_ch_T0001554:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24080949	24094023	.	+	.	source_transcript=ENST00000725553.1;source_transcript_name=ENST00000725553;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725553.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001554;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001554;transcript_name=HG00140_ch_T0001554;gene_name=ENSG00000294742;ID=intron:HG00140_ch_T0001554:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24094024	24094091	.	+	.	source_transcript=ENST00000725553.1;source_transcript_name=ENST00000725553;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725553.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001554;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001554;transcript_name=HG00140_ch_T0001554;gene_name=ENSG00000294742;ID=exon:HG00140_ch_T0001554:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24094092	24107981	.	+	.	source_transcript=ENST00000725553.1;source_transcript_name=ENST00000725553;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725553.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001554;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001554;transcript_name=HG00140_ch_T0001554;gene_name=ENSG00000294742;ID=intron:HG00140_ch_T0001554:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24107982	24108010	.	+	.	source_transcript=ENST00000725553.1;source_transcript_name=ENST00000725553;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725553.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001554;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001554;transcript_name=HG00140_ch_T0001554;gene_name=ENSG00000294742;ID=exon:HG00140_ch_T0001554:3;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24108011	24109859	.	+	.	source_transcript=ENST00000725553.1;source_transcript_name=ENST00000725553;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725553.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001554;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001554;transcript_name=HG00140_ch_T0001554;gene_name=ENSG00000294742;ID=intron:HG00140_ch_T0001554:3;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24109860	24109989	.	+	.	source_transcript=ENST00000725553.1;source_transcript_name=ENST00000725553;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725553.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725553.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001554;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001554;transcript_name=HG00140_ch_T0001554;gene_name=ENSG00000294742;ID=exon:HG00140_ch_T0001554:4;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	24080182	24179303	1000	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001555;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_G0000537;transcript_name=HG00140_ch_T0001555;gene_name=ENSG00000294742;ID=HG00140_ch_T0001555;Name=ENSG00000294742
HG00140_chrY	CAT	exon	24080182	24080253	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001555;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001555;transcript_name=HG00140_ch_T0001555;gene_name=ENSG00000294742;ID=exon:HG00140_ch_T0001555:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24080254	24080701	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001555;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001555;transcript_name=HG00140_ch_T0001555;gene_name=ENSG00000294742;ID=intron:HG00140_ch_T0001555:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24080702	24080948	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001555;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001555;transcript_name=HG00140_ch_T0001555;gene_name=ENSG00000294742;ID=exon:HG00140_ch_T0001555:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24080949	24107981	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001555;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001555;transcript_name=HG00140_ch_T0001555;gene_name=ENSG00000294742;ID=intron:HG00140_ch_T0001555:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24107982	24108010	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001555;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001555;transcript_name=HG00140_ch_T0001555;gene_name=ENSG00000294742;ID=exon:HG00140_ch_T0001555:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24108011	24109981	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001555;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001555;transcript_name=HG00140_ch_T0001555;gene_name=ENSG00000294742;ID=intron:HG00140_ch_T0001555:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24109982	24110054	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001555;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001555;transcript_name=HG00140_ch_T0001555;gene_name=ENSG00000294742;ID=exon:HG00140_ch_T0001555:3;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24110055	24111820	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001555;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001555;transcript_name=HG00140_ch_T0001555;gene_name=ENSG00000294742;ID=intron:HG00140_ch_T0001555:3;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24111821	24111851	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001555;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001555;transcript_name=HG00140_ch_T0001555;gene_name=ENSG00000294742;ID=exon:HG00140_ch_T0001555:4;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24111852	24113636	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001555;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001555;transcript_name=HG00140_ch_T0001555;gene_name=ENSG00000294742;ID=intron:HG00140_ch_T0001555:4;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24113637	24113812	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001555;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001555;transcript_name=HG00140_ch_T0001555;gene_name=ENSG00000294742;ID=exon:HG00140_ch_T0001555:5;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24113813	24125032	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001555;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001555;transcript_name=HG00140_ch_T0001555;gene_name=ENSG00000294742;ID=intron:HG00140_ch_T0001555:5;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24125033	24125136	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001555;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001555;transcript_name=HG00140_ch_T0001555;gene_name=ENSG00000294742;ID=exon:HG00140_ch_T0001555:6;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24125137	24179269	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001555;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001555;transcript_name=HG00140_ch_T0001555;gene_name=ENSG00000294742;ID=intron:HG00140_ch_T0001555:6;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24179270	24179303	.	+	.	source_transcript=ENST00000725547.1;source_transcript_name=ENST00000725547;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725547.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725547.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001555;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001555;transcript_name=HG00140_ch_T0001555;gene_name=ENSG00000294742;ID=exon:HG00140_ch_T0001555:7;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	24080182	24110058	1000	+	.	source_transcript=ENST00000725552.1;source_transcript_name=ENST00000725552;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725552.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725552.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001556;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_G0000537;transcript_name=HG00140_ch_T0001556;gene_name=ENSG00000294742;ID=HG00140_ch_T0001556;Name=ENSG00000294742
HG00140_chrY	CAT	exon	24080182	24080253	.	+	.	source_transcript=ENST00000725552.1;source_transcript_name=ENST00000725552;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725552.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001556;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001556;transcript_name=HG00140_ch_T0001556;gene_name=ENSG00000294742;ID=exon:HG00140_ch_T0001556:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24080254	24080701	.	+	.	source_transcript=ENST00000725552.1;source_transcript_name=ENST00000725552;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725552.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001556;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001556;transcript_name=HG00140_ch_T0001556;gene_name=ENSG00000294742;ID=intron:HG00140_ch_T0001556:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24080702	24080948	.	+	.	source_transcript=ENST00000725552.1;source_transcript_name=ENST00000725552;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725552.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001556;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001556;transcript_name=HG00140_ch_T0001556;gene_name=ENSG00000294742;ID=exon:HG00140_ch_T0001556:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24080949	24107981	.	+	.	source_transcript=ENST00000725552.1;source_transcript_name=ENST00000725552;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725552.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001556;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001556;transcript_name=HG00140_ch_T0001556;gene_name=ENSG00000294742;ID=intron:HG00140_ch_T0001556:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24107982	24108010	.	+	.	source_transcript=ENST00000725552.1;source_transcript_name=ENST00000725552;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725552.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001556;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001556;transcript_name=HG00140_ch_T0001556;gene_name=ENSG00000294742;ID=exon:HG00140_ch_T0001556:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24108011	24108104	.	+	.	source_transcript=ENST00000725552.1;source_transcript_name=ENST00000725552;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725552.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001556;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001556;transcript_name=HG00140_ch_T0001556;gene_name=ENSG00000294742;ID=intron:HG00140_ch_T0001556:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24108105	24108177	.	+	.	source_transcript=ENST00000725552.1;source_transcript_name=ENST00000725552;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725552.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001556;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001556;transcript_name=HG00140_ch_T0001556;gene_name=ENSG00000294742;ID=exon:HG00140_ch_T0001556:3;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24108178	24109859	.	+	.	source_transcript=ENST00000725552.1;source_transcript_name=ENST00000725552;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725552.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001556;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001556;transcript_name=HG00140_ch_T0001556;gene_name=ENSG00000294742;ID=intron:HG00140_ch_T0001556:3;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24109860	24110058	.	+	.	source_transcript=ENST00000725552.1;source_transcript_name=ENST00000725552;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725552.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001556;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001556;transcript_name=HG00140_ch_T0001556;gene_name=ENSG00000294742;ID=exon:HG00140_ch_T0001556:4;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	24080204	24125121	1000	+	.	source_transcript=ENST00000725549.1;source_transcript_name=ENST00000725549;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725549.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001557;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_G0000537;transcript_name=HG00140_ch_T0001557;gene_name=ENSG00000294742;ID=HG00140_ch_T0001557;Name=ENSG00000294742
HG00140_chrY	CAT	exon	24080204	24080253	.	+	.	source_transcript=ENST00000725549.1;source_transcript_name=ENST00000725549;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001557;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001557;transcript_name=HG00140_ch_T0001557;gene_name=ENSG00000294742;ID=exon:HG00140_ch_T0001557:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24080254	24080701	.	+	.	source_transcript=ENST00000725549.1;source_transcript_name=ENST00000725549;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001557;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001557;transcript_name=HG00140_ch_T0001557;gene_name=ENSG00000294742;ID=intron:HG00140_ch_T0001557:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24080702	24080948	.	+	.	source_transcript=ENST00000725549.1;source_transcript_name=ENST00000725549;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001557;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001557;transcript_name=HG00140_ch_T0001557;gene_name=ENSG00000294742;ID=exon:HG00140_ch_T0001557:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24080949	24107981	.	+	.	source_transcript=ENST00000725549.1;source_transcript_name=ENST00000725549;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001557;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001557;transcript_name=HG00140_ch_T0001557;gene_name=ENSG00000294742;ID=intron:HG00140_ch_T0001557:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24107982	24108010	.	+	.	source_transcript=ENST00000725549.1;source_transcript_name=ENST00000725549;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001557;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001557;transcript_name=HG00140_ch_T0001557;gene_name=ENSG00000294742;ID=exon:HG00140_ch_T0001557:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24108011	24125032	.	+	.	source_transcript=ENST00000725549.1;source_transcript_name=ENST00000725549;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001557;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001557;transcript_name=HG00140_ch_T0001557;gene_name=ENSG00000294742;ID=intron:HG00140_ch_T0001557:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24125033	24125121	.	+	.	source_transcript=ENST00000725549.1;source_transcript_name=ENST00000725549;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725549.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725549.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001557;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001557;transcript_name=HG00140_ch_T0001557;gene_name=ENSG00000294742;ID=exon:HG00140_ch_T0001557:3;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	24080208	24109999	1000	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001558;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_G0000537;transcript_name=HG00140_ch_T0001558;gene_name=ENSG00000294742;ID=HG00140_ch_T0001558;Name=ENSG00000294742
HG00140_chrY	CAT	exon	24080208	24080253	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001558;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001558;transcript_name=HG00140_ch_T0001558;gene_name=ENSG00000294742;ID=exon:HG00140_ch_T0001558:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24080254	24080701	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001558;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001558;transcript_name=HG00140_ch_T0001558;gene_name=ENSG00000294742;ID=intron:HG00140_ch_T0001558:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24080702	24080948	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001558;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001558;transcript_name=HG00140_ch_T0001558;gene_name=ENSG00000294742;ID=exon:HG00140_ch_T0001558:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24080949	24091436	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001558;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001558;transcript_name=HG00140_ch_T0001558;gene_name=ENSG00000294742;ID=intron:HG00140_ch_T0001558:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24091437	24091574	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001558;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001558;transcript_name=HG00140_ch_T0001558;gene_name=ENSG00000294742;ID=exon:HG00140_ch_T0001558:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24091575	24094023	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001558;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001558;transcript_name=HG00140_ch_T0001558;gene_name=ENSG00000294742;ID=intron:HG00140_ch_T0001558:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24094024	24094091	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001558;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001558;transcript_name=HG00140_ch_T0001558;gene_name=ENSG00000294742;ID=exon:HG00140_ch_T0001558:3;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24094092	24097451	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001558;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001558;transcript_name=HG00140_ch_T0001558;gene_name=ENSG00000294742;ID=intron:HG00140_ch_T0001558:3;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24097452	24097608	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001558;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001558;transcript_name=HG00140_ch_T0001558;gene_name=ENSG00000294742;ID=exon:HG00140_ch_T0001558:4;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24097609	24107981	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001558;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001558;transcript_name=HG00140_ch_T0001558;gene_name=ENSG00000294742;ID=intron:HG00140_ch_T0001558:4;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24107982	24108010	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001558;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001558;transcript_name=HG00140_ch_T0001558;gene_name=ENSG00000294742;ID=exon:HG00140_ch_T0001558:5;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24108011	24108104	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001558;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001558;transcript_name=HG00140_ch_T0001558;gene_name=ENSG00000294742;ID=intron:HG00140_ch_T0001558:5;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24108105	24108177	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001558;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001558;transcript_name=HG00140_ch_T0001558;gene_name=ENSG00000294742;ID=exon:HG00140_ch_T0001558:6;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24108178	24109859	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001558;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001558;transcript_name=HG00140_ch_T0001558;gene_name=ENSG00000294742;ID=intron:HG00140_ch_T0001558:6;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24109860	24109999	.	+	.	source_transcript=ENST00000725554.1;source_transcript_name=ENST00000725554;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725554.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725554.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001558;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001558;transcript_name=HG00140_ch_T0001558;gene_name=ENSG00000294742;ID=exon:HG00140_ch_T0001558:7;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	24080256	24110043	1000	+	.	source_transcript=ENST00000725555.1;source_transcript_name=ENST00000725555;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725555.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725555.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001559;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_G0000537;transcript_name=HG00140_ch_T0001559;gene_name=ENSG00000294742;ID=HG00140_ch_T0001559;Name=ENSG00000294742
HG00140_chrY	CAT	exon	24080256	24080353	.	+	.	source_transcript=ENST00000725555.1;source_transcript_name=ENST00000725555;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725555.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725555.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001559;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001559;transcript_name=HG00140_ch_T0001559;gene_name=ENSG00000294742;ID=exon:HG00140_ch_T0001559:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24080354	24080701	.	+	.	source_transcript=ENST00000725555.1;source_transcript_name=ENST00000725555;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725555.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725555.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001559;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001559;transcript_name=HG00140_ch_T0001559;gene_name=ENSG00000294742;ID=intron:HG00140_ch_T0001559:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24080702	24080948	.	+	.	source_transcript=ENST00000725555.1;source_transcript_name=ENST00000725555;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725555.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725555.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001559;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001559;transcript_name=HG00140_ch_T0001559;gene_name=ENSG00000294742;ID=exon:HG00140_ch_T0001559:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24080949	24107981	.	+	.	source_transcript=ENST00000725555.1;source_transcript_name=ENST00000725555;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725555.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725555.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001559;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001559;transcript_name=HG00140_ch_T0001559;gene_name=ENSG00000294742;ID=intron:HG00140_ch_T0001559:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24107982	24108010	.	+	.	source_transcript=ENST00000725555.1;source_transcript_name=ENST00000725555;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725555.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725555.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001559;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001559;transcript_name=HG00140_ch_T0001559;gene_name=ENSG00000294742;ID=exon:HG00140_ch_T0001559:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24108011	24109859	.	+	.	source_transcript=ENST00000725555.1;source_transcript_name=ENST00000725555;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725555.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725555.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001559;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001559;transcript_name=HG00140_ch_T0001559;gene_name=ENSG00000294742;ID=intron:HG00140_ch_T0001559:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24109860	24110043	.	+	.	source_transcript=ENST00000725555.1;source_transcript_name=ENST00000725555;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725555.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725555.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001559;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001559;transcript_name=HG00140_ch_T0001559;gene_name=ENSG00000294742;ID=exon:HG00140_ch_T0001559:3;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	24080701	24125123	1000	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001560;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_G0000537;transcript_name=HG00140_ch_T0001560;gene_name=ENSG00000294742;ID=HG00140_ch_T0001560;Name=ENSG00000294742
HG00140_chrY	CAT	exon	24080701	24080948	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001560;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001560;transcript_name=HG00140_ch_T0001560;gene_name=ENSG00000294742;ID=exon:HG00140_ch_T0001560:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24080949	24107981	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001560;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001560;transcript_name=HG00140_ch_T0001560;gene_name=ENSG00000294742;ID=intron:HG00140_ch_T0001560:0;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24107982	24108010	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001560;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001560;transcript_name=HG00140_ch_T0001560;gene_name=ENSG00000294742;ID=exon:HG00140_ch_T0001560:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24108011	24109981	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001560;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001560;transcript_name=HG00140_ch_T0001560;gene_name=ENSG00000294742;ID=intron:HG00140_ch_T0001560:1;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24109982	24110054	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001560;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001560;transcript_name=HG00140_ch_T0001560;gene_name=ENSG00000294742;ID=exon:HG00140_ch_T0001560:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24110055	24111820	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001560;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001560;transcript_name=HG00140_ch_T0001560;gene_name=ENSG00000294742;ID=intron:HG00140_ch_T0001560:2;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24111821	24111851	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001560;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001560;transcript_name=HG00140_ch_T0001560;gene_name=ENSG00000294742;ID=exon:HG00140_ch_T0001560:3;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24111852	24113633	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001560;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001560;transcript_name=HG00140_ch_T0001560;gene_name=ENSG00000294742;ID=intron:HG00140_ch_T0001560:3;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24113634	24113812	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001560;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001560;transcript_name=HG00140_ch_T0001560;gene_name=ENSG00000294742;ID=exon:HG00140_ch_T0001560:4;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24113813	24125032	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001560;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001560;transcript_name=HG00140_ch_T0001560;gene_name=ENSG00000294742;ID=intron:HG00140_ch_T0001560:4;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24125033	24125123	.	+	.	source_transcript=ENST00000725550.1;source_transcript_name=ENST00000725550;source_gene=ENSG00000294742.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294742.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294742;transcript_id=HG00140_ch_T0001560;gene_id=HG00140_ch_G0000537;Parent=HG00140_ch_T0001560;transcript_name=HG00140_ch_T0001560;gene_name=ENSG00000294742;ID=exon:HG00140_ch_T0001560:5;Name=ENSG00000294742;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	24080818	24091578	.	+	.	source_gene_common_name=ANKRD36P1;source_gene=ENSG00000188399.5;gene_id=HG00140_ch_G0000538;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ANKRD36P1;gene_sources=liftoff;ID=HG00140_ch_G0000538;Name=ANKRD36P1
HG00140_chrY	CAT	transcript	24080818	24091578	1000	+	.	source_transcript=ENST00000344424.4;source_transcript_name=ANKRD36P1-201;source_gene=ENSG00000188399.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188399.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000344424.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344424.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD36P1;transcript_id=HG00140_ch_T0001561;gene_id=HG00140_ch_G0000538;Parent=HG00140_ch_G0000538;transcript_name=HG00140_ch_T0001561;gene_name=ANKRD36P1;ID=HG00140_ch_T0001561;Name=ANKRD36P1
HG00140_chrY	CAT	exon	24080818	24080948	.	+	.	source_transcript=ENST00000344424.4;source_transcript_name=ANKRD36P1-201;source_gene=ENSG00000188399.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188399.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000344424.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344424.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD36P1;transcript_id=HG00140_ch_T0001561;gene_id=HG00140_ch_G0000538;Parent=HG00140_ch_T0001561;transcript_name=HG00140_ch_T0001561;gene_name=ANKRD36P1;ID=exon:HG00140_ch_T0001561:0;Name=ANKRD36P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24080949	24085050	.	+	.	source_transcript=ENST00000344424.4;source_transcript_name=ANKRD36P1-201;source_gene=ENSG00000188399.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188399.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000344424.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344424.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD36P1;transcript_id=HG00140_ch_T0001561;gene_id=HG00140_ch_G0000538;Parent=HG00140_ch_T0001561;transcript_name=HG00140_ch_T0001561;gene_name=ANKRD36P1;ID=intron:HG00140_ch_T0001561:0;Name=ANKRD36P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24085051	24085165	.	+	.	source_transcript=ENST00000344424.4;source_transcript_name=ANKRD36P1-201;source_gene=ENSG00000188399.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188399.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000344424.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344424.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD36P1;transcript_id=HG00140_ch_T0001561;gene_id=HG00140_ch_G0000538;Parent=HG00140_ch_T0001561;transcript_name=HG00140_ch_T0001561;gene_name=ANKRD36P1;ID=exon:HG00140_ch_T0001561:1;Name=ANKRD36P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24085166	24085331	.	+	.	source_transcript=ENST00000344424.4;source_transcript_name=ANKRD36P1-201;source_gene=ENSG00000188399.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188399.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000344424.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344424.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD36P1;transcript_id=HG00140_ch_T0001561;gene_id=HG00140_ch_G0000538;Parent=HG00140_ch_T0001561;transcript_name=HG00140_ch_T0001561;gene_name=ANKRD36P1;ID=intron:HG00140_ch_T0001561:1;Name=ANKRD36P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24085332	24085505	.	+	.	source_transcript=ENST00000344424.4;source_transcript_name=ANKRD36P1-201;source_gene=ENSG00000188399.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188399.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000344424.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344424.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD36P1;transcript_id=HG00140_ch_T0001561;gene_id=HG00140_ch_G0000538;Parent=HG00140_ch_T0001561;transcript_name=HG00140_ch_T0001561;gene_name=ANKRD36P1;ID=exon:HG00140_ch_T0001561:2;Name=ANKRD36P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24085506	24089846	.	+	.	source_transcript=ENST00000344424.4;source_transcript_name=ANKRD36P1-201;source_gene=ENSG00000188399.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188399.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000344424.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344424.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD36P1;transcript_id=HG00140_ch_T0001561;gene_id=HG00140_ch_G0000538;Parent=HG00140_ch_T0001561;transcript_name=HG00140_ch_T0001561;gene_name=ANKRD36P1;ID=intron:HG00140_ch_T0001561:2;Name=ANKRD36P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24089847	24089943	.	+	.	source_transcript=ENST00000344424.4;source_transcript_name=ANKRD36P1-201;source_gene=ENSG00000188399.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188399.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000344424.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344424.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD36P1;transcript_id=HG00140_ch_T0001561;gene_id=HG00140_ch_G0000538;Parent=HG00140_ch_T0001561;transcript_name=HG00140_ch_T0001561;gene_name=ANKRD36P1;ID=exon:HG00140_ch_T0001561:3;Name=ANKRD36P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24089944	24091436	.	+	.	source_transcript=ENST00000344424.4;source_transcript_name=ANKRD36P1-201;source_gene=ENSG00000188399.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188399.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000344424.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344424.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD36P1;transcript_id=HG00140_ch_T0001561;gene_id=HG00140_ch_G0000538;Parent=HG00140_ch_T0001561;transcript_name=HG00140_ch_T0001561;gene_name=ANKRD36P1;ID=intron:HG00140_ch_T0001561:3;Name=ANKRD36P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24091437	24091578	.	+	.	source_transcript=ENST00000344424.4;source_transcript_name=ANKRD36P1-201;source_gene=ENSG00000188399.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000188399.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000344424.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344424.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ANKRD36P1;transcript_id=HG00140_ch_T0001561;gene_id=HG00140_ch_G0000538;Parent=HG00140_ch_T0001561;transcript_name=HG00140_ch_T0001561;gene_name=ANKRD36P1;ID=exon:HG00140_ch_T0001561:4;Name=ANKRD36P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	24125030	24125140	.	+	.	source_gene_common_name=ENSG00000277146;source_gene=ENSG00000277146.1;gene_id=HG00140_ch_G0000539;gene_biotype=transcribed_processed_pseudogene;gene_name=ENSG00000277146;gene_sources=liftoff;ID=HG00140_ch_G0000539;Name=ENSG00000277146
HG00140_chrY	CAT	transcript	24125030	24125140	1000	+	.	source_transcript=ENST00000619329.1;source_transcript_name=ENST00000619329;source_gene=ENSG00000277146.1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000277146.1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000619329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000619329.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277146;transcript_id=HG00140_ch_T0001562;gene_id=HG00140_ch_G0000539;Parent=HG00140_ch_G0000539;transcript_name=HG00140_ch_T0001562;gene_name=ENSG00000277146;ID=HG00140_ch_T0001562;Name=ENSG00000277146
HG00140_chrY	CAT	exon	24125030	24125140	.	+	.	source_transcript=ENST00000619329.1;source_transcript_name=ENST00000619329;source_gene=ENSG00000277146.1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000277146.1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000619329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000619329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000277146;transcript_id=HG00140_ch_T0001562;gene_id=HG00140_ch_G0000539;Parent=HG00140_ch_T0001562;transcript_name=HG00140_ch_T0001562;gene_name=ENSG00000277146;ID=exon:HG00140_ch_T0001562:0;Name=ENSG00000277146;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	24164655	24168607	.	+	.	source_gene_common_name=ENSG00000294758;source_gene=ENSG00000294758.1;alternative_source_transcripts=ENST00000725774.1,ENST00000725774.1;gene_id=HG00140_ch_G0000540;gene_biotype=lncRNA;gene_name=ENSG00000294758;gene_sources=liftoff;ID=HG00140_ch_G0000540;Name=ENSG00000294758
HG00140_chrY	CAT	transcript	24164655	24168607	1000	+	.	source_transcript=ENST00000725774.1;source_transcript_name=ENST00000725774;source_gene=ENSG00000294758.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294758.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725774.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294758;alternative_source_transcripts=ENST00000725774.1,ENST00000725774.1;transcript_id=HG00140_ch_T0001563;gene_id=HG00140_ch_G0000540;Parent=HG00140_ch_G0000540;transcript_name=HG00140_ch_T0001563;gene_name=ENSG00000294758;ID=HG00140_ch_T0001563;Name=ENSG00000294758
HG00140_chrY	CAT	exon	24164655	24164693	.	+	.	source_transcript=ENST00000725774.1;source_transcript_name=ENST00000725774;source_gene=ENSG00000294758.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294758.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725774.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294758;alternative_source_transcripts=ENST00000725774.1,ENST00000725774.1;transcript_id=HG00140_ch_T0001563;gene_id=HG00140_ch_G0000540;Parent=HG00140_ch_T0001563;transcript_name=HG00140_ch_T0001563;gene_name=ENSG00000294758;ID=exon:HG00140_ch_T0001563:0;Name=ENSG00000294758;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24164694	24167927	.	+	.	source_transcript=ENST00000725774.1;source_transcript_name=ENST00000725774;source_gene=ENSG00000294758.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294758.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725774.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294758;alternative_source_transcripts=ENST00000725774.1,ENST00000725774.1;transcript_id=HG00140_ch_T0001563;gene_id=HG00140_ch_G0000540;Parent=HG00140_ch_T0001563;transcript_name=HG00140_ch_T0001563;gene_name=ENSG00000294758;ID=intron:HG00140_ch_T0001563:0;Name=ENSG00000294758;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24167928	24167984	.	+	.	source_transcript=ENST00000725774.1;source_transcript_name=ENST00000725774;source_gene=ENSG00000294758.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294758.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725774.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294758;alternative_source_transcripts=ENST00000725774.1,ENST00000725774.1;transcript_id=HG00140_ch_T0001563;gene_id=HG00140_ch_G0000540;Parent=HG00140_ch_T0001563;transcript_name=HG00140_ch_T0001563;gene_name=ENSG00000294758;ID=exon:HG00140_ch_T0001563:1;Name=ENSG00000294758;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24167985	24168343	.	+	.	source_transcript=ENST00000725774.1;source_transcript_name=ENST00000725774;source_gene=ENSG00000294758.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294758.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725774.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294758;alternative_source_transcripts=ENST00000725774.1,ENST00000725774.1;transcript_id=HG00140_ch_T0001563;gene_id=HG00140_ch_G0000540;Parent=HG00140_ch_T0001563;transcript_name=HG00140_ch_T0001563;gene_name=ENSG00000294758;ID=intron:HG00140_ch_T0001563:1;Name=ENSG00000294758;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24168344	24168607	.	+	.	source_transcript=ENST00000725774.1;source_transcript_name=ENST00000725774;source_gene=ENSG00000294758.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294758.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000725774.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000725774.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294758;alternative_source_transcripts=ENST00000725774.1,ENST00000725774.1;transcript_id=HG00140_ch_T0001563;gene_id=HG00140_ch_G0000540;Parent=HG00140_ch_T0001563;transcript_name=HG00140_ch_T0001563;gene_name=ENSG00000294758;ID=exon:HG00140_ch_T0001563:2;Name=ENSG00000294758;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	24179270	24250758	.	+	.	source_gene_common_name=TPTE2P4;source_gene=ENSG00000215506.5;gene_id=HG00140_ch_G0000541;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=TPTE2P4;gene_sources=liftoff;ID=HG00140_ch_G0000541;Name=TPTE2P4
HG00140_chrY	CAT	transcript	24179270	24250758	1000	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00140_ch_T0001564;gene_id=HG00140_ch_G0000541;Parent=HG00140_ch_G0000541;transcript_name=HG00140_ch_T0001564;gene_name=TPTE2P4;ID=HG00140_ch_T0001564;Name=TPTE2P4
HG00140_chrY	CAT	exon	24179270	24179323	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00140_ch_T0001564;gene_id=HG00140_ch_G0000541;Parent=HG00140_ch_T0001564;transcript_name=HG00140_ch_T0001564;gene_name=TPTE2P4;ID=exon:HG00140_ch_T0001564:0;Name=TPTE2P4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24179324	24186112	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00140_ch_T0001564;gene_id=HG00140_ch_G0000541;Parent=HG00140_ch_T0001564;transcript_name=HG00140_ch_T0001564;gene_name=TPTE2P4;ID=intron:HG00140_ch_T0001564:0;Name=TPTE2P4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24186113	24186166	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00140_ch_T0001564;gene_id=HG00140_ch_G0000541;Parent=HG00140_ch_T0001564;transcript_name=HG00140_ch_T0001564;gene_name=TPTE2P4;ID=exon:HG00140_ch_T0001564:1;Name=TPTE2P4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24186167	24186711	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00140_ch_T0001564;gene_id=HG00140_ch_G0000541;Parent=HG00140_ch_T0001564;transcript_name=HG00140_ch_T0001564;gene_name=TPTE2P4;ID=intron:HG00140_ch_T0001564:1;Name=TPTE2P4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24186712	24186765	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00140_ch_T0001564;gene_id=HG00140_ch_G0000541;Parent=HG00140_ch_T0001564;transcript_name=HG00140_ch_T0001564;gene_name=TPTE2P4;ID=exon:HG00140_ch_T0001564:2;Name=TPTE2P4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24186766	24196907	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00140_ch_T0001564;gene_id=HG00140_ch_G0000541;Parent=HG00140_ch_T0001564;transcript_name=HG00140_ch_T0001564;gene_name=TPTE2P4;ID=intron:HG00140_ch_T0001564:2;Name=TPTE2P4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24196908	24196967	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00140_ch_T0001564;gene_id=HG00140_ch_G0000541;Parent=HG00140_ch_T0001564;transcript_name=HG00140_ch_T0001564;gene_name=TPTE2P4;ID=exon:HG00140_ch_T0001564:3;Name=TPTE2P4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24196968	24203840	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00140_ch_T0001564;gene_id=HG00140_ch_G0000541;Parent=HG00140_ch_T0001564;transcript_name=HG00140_ch_T0001564;gene_name=TPTE2P4;ID=intron:HG00140_ch_T0001564:3;Name=TPTE2P4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24203841	24203891	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00140_ch_T0001564;gene_id=HG00140_ch_G0000541;Parent=HG00140_ch_T0001564;transcript_name=HG00140_ch_T0001564;gene_name=TPTE2P4;ID=exon:HG00140_ch_T0001564:4;Name=TPTE2P4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24203892	24205379	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00140_ch_T0001564;gene_id=HG00140_ch_G0000541;Parent=HG00140_ch_T0001564;transcript_name=HG00140_ch_T0001564;gene_name=TPTE2P4;ID=intron:HG00140_ch_T0001564:4;Name=TPTE2P4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24205380	24205541	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00140_ch_T0001564;gene_id=HG00140_ch_G0000541;Parent=HG00140_ch_T0001564;transcript_name=HG00140_ch_T0001564;gene_name=TPTE2P4;ID=exon:HG00140_ch_T0001564:5;Name=TPTE2P4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24205542	24212026	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00140_ch_T0001564;gene_id=HG00140_ch_G0000541;Parent=HG00140_ch_T0001564;transcript_name=HG00140_ch_T0001564;gene_name=TPTE2P4;ID=intron:HG00140_ch_T0001564:5;Name=TPTE2P4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24212027	24212146	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00140_ch_T0001564;gene_id=HG00140_ch_G0000541;Parent=HG00140_ch_T0001564;transcript_name=HG00140_ch_T0001564;gene_name=TPTE2P4;ID=exon:HG00140_ch_T0001564:6;Name=TPTE2P4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24212147	24213799	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00140_ch_T0001564;gene_id=HG00140_ch_G0000541;Parent=HG00140_ch_T0001564;transcript_name=HG00140_ch_T0001564;gene_name=TPTE2P4;ID=intron:HG00140_ch_T0001564:6;Name=TPTE2P4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24213800	24213899	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00140_ch_T0001564;gene_id=HG00140_ch_G0000541;Parent=HG00140_ch_T0001564;transcript_name=HG00140_ch_T0001564;gene_name=TPTE2P4;ID=exon:HG00140_ch_T0001564:7;Name=TPTE2P4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24213900	24214045	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00140_ch_T0001564;gene_id=HG00140_ch_G0000541;Parent=HG00140_ch_T0001564;transcript_name=HG00140_ch_T0001564;gene_name=TPTE2P4;ID=intron:HG00140_ch_T0001564:7;Name=TPTE2P4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24214046	24214108	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00140_ch_T0001564;gene_id=HG00140_ch_G0000541;Parent=HG00140_ch_T0001564;transcript_name=HG00140_ch_T0001564;gene_name=TPTE2P4;ID=exon:HG00140_ch_T0001564:8;Name=TPTE2P4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24214109	24214840	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00140_ch_T0001564;gene_id=HG00140_ch_G0000541;Parent=HG00140_ch_T0001564;transcript_name=HG00140_ch_T0001564;gene_name=TPTE2P4;ID=intron:HG00140_ch_T0001564:8;Name=TPTE2P4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24214841	24214905	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00140_ch_T0001564;gene_id=HG00140_ch_G0000541;Parent=HG00140_ch_T0001564;transcript_name=HG00140_ch_T0001564;gene_name=TPTE2P4;ID=exon:HG00140_ch_T0001564:9;Name=TPTE2P4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24214906	24228055	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00140_ch_T0001564;gene_id=HG00140_ch_G0000541;Parent=HG00140_ch_T0001564;transcript_name=HG00140_ch_T0001564;gene_name=TPTE2P4;ID=intron:HG00140_ch_T0001564:9;Name=TPTE2P4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24228056	24228120	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00140_ch_T0001564;gene_id=HG00140_ch_G0000541;Parent=HG00140_ch_T0001564;transcript_name=HG00140_ch_T0001564;gene_name=TPTE2P4;ID=exon:HG00140_ch_T0001564:10;Name=TPTE2P4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24228121	24228941	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00140_ch_T0001564;gene_id=HG00140_ch_G0000541;Parent=HG00140_ch_T0001564;transcript_name=HG00140_ch_T0001564;gene_name=TPTE2P4;ID=intron:HG00140_ch_T0001564:10;Name=TPTE2P4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24228942	24229016	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00140_ch_T0001564;gene_id=HG00140_ch_G0000541;Parent=HG00140_ch_T0001564;transcript_name=HG00140_ch_T0001564;gene_name=TPTE2P4;ID=exon:HG00140_ch_T0001564:11;Name=TPTE2P4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24229017	24229114	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00140_ch_T0001564;gene_id=HG00140_ch_G0000541;Parent=HG00140_ch_T0001564;transcript_name=HG00140_ch_T0001564;gene_name=TPTE2P4;ID=intron:HG00140_ch_T0001564:11;Name=TPTE2P4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24229115	24229203	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00140_ch_T0001564;gene_id=HG00140_ch_G0000541;Parent=HG00140_ch_T0001564;transcript_name=HG00140_ch_T0001564;gene_name=TPTE2P4;ID=exon:HG00140_ch_T0001564:12;Name=TPTE2P4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24229204	24235385	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00140_ch_T0001564;gene_id=HG00140_ch_G0000541;Parent=HG00140_ch_T0001564;transcript_name=HG00140_ch_T0001564;gene_name=TPTE2P4;ID=intron:HG00140_ch_T0001564:12;Name=TPTE2P4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24235386	24235446	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00140_ch_T0001564;gene_id=HG00140_ch_G0000541;Parent=HG00140_ch_T0001564;transcript_name=HG00140_ch_T0001564;gene_name=TPTE2P4;ID=exon:HG00140_ch_T0001564:13;Name=TPTE2P4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24235447	24237243	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00140_ch_T0001564;gene_id=HG00140_ch_G0000541;Parent=HG00140_ch_T0001564;transcript_name=HG00140_ch_T0001564;gene_name=TPTE2P4;ID=intron:HG00140_ch_T0001564:13;Name=TPTE2P4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24237244	24237325	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00140_ch_T0001564;gene_id=HG00140_ch_G0000541;Parent=HG00140_ch_T0001564;transcript_name=HG00140_ch_T0001564;gene_name=TPTE2P4;ID=exon:HG00140_ch_T0001564:14;Name=TPTE2P4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24237326	24240925	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00140_ch_T0001564;gene_id=HG00140_ch_G0000541;Parent=HG00140_ch_T0001564;transcript_name=HG00140_ch_T0001564;gene_name=TPTE2P4;ID=intron:HG00140_ch_T0001564:14;Name=TPTE2P4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24240926	24241031	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00140_ch_T0001564;gene_id=HG00140_ch_G0000541;Parent=HG00140_ch_T0001564;transcript_name=HG00140_ch_T0001564;gene_name=TPTE2P4;ID=exon:HG00140_ch_T0001564:15;Name=TPTE2P4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24241032	24242948	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00140_ch_T0001564;gene_id=HG00140_ch_G0000541;Parent=HG00140_ch_T0001564;transcript_name=HG00140_ch_T0001564;gene_name=TPTE2P4;ID=intron:HG00140_ch_T0001564:15;Name=TPTE2P4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24242949	24243028	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00140_ch_T0001564;gene_id=HG00140_ch_G0000541;Parent=HG00140_ch_T0001564;transcript_name=HG00140_ch_T0001564;gene_name=TPTE2P4;ID=exon:HG00140_ch_T0001564:16;Name=TPTE2P4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24243029	24246990	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00140_ch_T0001564;gene_id=HG00140_ch_G0000541;Parent=HG00140_ch_T0001564;transcript_name=HG00140_ch_T0001564;gene_name=TPTE2P4;ID=intron:HG00140_ch_T0001564:16;Name=TPTE2P4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24246991	24247081	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00140_ch_T0001564;gene_id=HG00140_ch_G0000541;Parent=HG00140_ch_T0001564;transcript_name=HG00140_ch_T0001564;gene_name=TPTE2P4;ID=exon:HG00140_ch_T0001564:17;Name=TPTE2P4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24247082	24248490	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00140_ch_T0001564;gene_id=HG00140_ch_G0000541;Parent=HG00140_ch_T0001564;transcript_name=HG00140_ch_T0001564;gene_name=TPTE2P4;ID=intron:HG00140_ch_T0001564:17;Name=TPTE2P4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24248491	24248561	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00140_ch_T0001564;gene_id=HG00140_ch_G0000541;Parent=HG00140_ch_T0001564;transcript_name=HG00140_ch_T0001564;gene_name=TPTE2P4;ID=exon:HG00140_ch_T0001564:18;Name=TPTE2P4;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24248562	24250656	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00140_ch_T0001564;gene_id=HG00140_ch_G0000541;Parent=HG00140_ch_T0001564;transcript_name=HG00140_ch_T0001564;gene_name=TPTE2P4;ID=intron:HG00140_ch_T0001564:18;Name=TPTE2P4;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24250657	24250758	.	+	.	source_transcript=ENST00000258589.8;source_transcript_name=TPTE2P4-201;source_gene=ENSG00000215506.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000215506.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000258589.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000258589.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TPTE2P4;transcript_id=HG00140_ch_T0001564;gene_id=HG00140_ch_G0000541;Parent=HG00140_ch_T0001564;transcript_name=HG00140_ch_T0001564;gene_name=TPTE2P4;ID=exon:HG00140_ch_T0001564:19;Name=TPTE2P4;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	24220481	24220799	.	+	.	source_gene_common_name=CYCSP49;source_gene=ENSG00000224240.1;alternative_source_transcripts=ENST00000420810.1,ENST00000420810.1;gene_id=HG00140_ch_G0000542;gene_biotype=processed_pseudogene;gene_name=CYCSP49;gene_sources=liftoff;ID=HG00140_ch_G0000542;Name=CYCSP49
HG00140_chrY	CAT	transcript	24220481	24220799	1000	+	.	source_transcript=ENST00000420810.1;source_transcript_name=CYCSP49-201;source_gene=ENSG00000224240.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224240.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420810.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CYCSP49;alternative_source_transcripts=ENST00000420810.1,ENST00000420810.1;transcript_id=HG00140_ch_T0001565;gene_id=HG00140_ch_G0000542;Parent=HG00140_ch_G0000542;transcript_name=HG00140_ch_T0001565;gene_name=CYCSP49;ID=HG00140_ch_T0001565;Name=CYCSP49
HG00140_chrY	CAT	exon	24220481	24220799	.	+	.	source_transcript=ENST00000420810.1;source_transcript_name=CYCSP49-201;source_gene=ENSG00000224240.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224240.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420810.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420810.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CYCSP49;alternative_source_transcripts=ENST00000420810.1,ENST00000420810.1;transcript_id=HG00140_ch_T0001565;gene_id=HG00140_ch_G0000542;Parent=HG00140_ch_T0001565;transcript_name=HG00140_ch_T0001565;gene_name=CYCSP49;ID=exon:HG00140_ch_T0001565:0;Name=CYCSP49;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	24257712	24262671	.	-	.	source_gene_common_name=SLC25A15P1;source_gene=ENSG00000227629.1;alternative_source_transcripts=ENST00000456738.1,ENST00000456738.1;gene_id=HG00140_ch_G0000543;gene_biotype=unprocessed_pseudogene;gene_name=SLC25A15P1;gene_sources=liftoff;ID=HG00140_ch_G0000543;Name=SLC25A15P1
HG00140_chrY	CAT	transcript	24257712	24262671	1000	-	.	source_transcript=ENST00000456738.1;source_transcript_name=SLC25A15P1-201;source_gene=ENSG00000227629.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227629.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456738.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A15P1;alternative_source_transcripts=ENST00000456738.1,ENST00000456738.1;transcript_id=HG00140_ch_T0001566;gene_id=HG00140_ch_G0000543;Parent=HG00140_ch_G0000543;transcript_name=HG00140_ch_T0001566;gene_name=SLC25A15P1;ID=HG00140_ch_T0001566;Name=SLC25A15P1
HG00140_chrY	CAT	exon	24257712	24257836	.	-	.	source_transcript=ENST00000456738.1;source_transcript_name=SLC25A15P1-201;source_gene=ENSG00000227629.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227629.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456738.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A15P1;alternative_source_transcripts=ENST00000456738.1,ENST00000456738.1;transcript_id=HG00140_ch_T0001566;gene_id=HG00140_ch_G0000543;Parent=HG00140_ch_T0001566;transcript_name=HG00140_ch_T0001566;gene_name=SLC25A15P1;ID=exon:HG00140_ch_T0001566:0;Name=SLC25A15P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24257837	24258467	.	-	.	source_transcript=ENST00000456738.1;source_transcript_name=SLC25A15P1-201;source_gene=ENSG00000227629.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227629.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456738.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A15P1;alternative_source_transcripts=ENST00000456738.1,ENST00000456738.1;transcript_id=HG00140_ch_T0001566;gene_id=HG00140_ch_G0000543;Parent=HG00140_ch_T0001566;transcript_name=HG00140_ch_T0001566;gene_name=SLC25A15P1;ID=intron:HG00140_ch_T0001566:0;Name=SLC25A15P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24258468	24258630	.	-	.	source_transcript=ENST00000456738.1;source_transcript_name=SLC25A15P1-201;source_gene=ENSG00000227629.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227629.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456738.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A15P1;alternative_source_transcripts=ENST00000456738.1,ENST00000456738.1;transcript_id=HG00140_ch_T0001566;gene_id=HG00140_ch_G0000543;Parent=HG00140_ch_T0001566;transcript_name=HG00140_ch_T0001566;gene_name=SLC25A15P1;ID=exon:HG00140_ch_T0001566:1;Name=SLC25A15P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24258631	24262617	.	-	.	source_transcript=ENST00000456738.1;source_transcript_name=SLC25A15P1-201;source_gene=ENSG00000227629.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227629.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456738.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A15P1;alternative_source_transcripts=ENST00000456738.1,ENST00000456738.1;transcript_id=HG00140_ch_T0001566;gene_id=HG00140_ch_G0000543;Parent=HG00140_ch_T0001566;transcript_name=HG00140_ch_T0001566;gene_name=SLC25A15P1;ID=intron:HG00140_ch_T0001566:1;Name=SLC25A15P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24262618	24262671	.	-	.	source_transcript=ENST00000456738.1;source_transcript_name=SLC25A15P1-201;source_gene=ENSG00000227629.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227629.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000456738.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456738.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A15P1;alternative_source_transcripts=ENST00000456738.1,ENST00000456738.1;transcript_id=HG00140_ch_T0001566;gene_id=HG00140_ch_G0000543;Parent=HG00140_ch_T0001566;transcript_name=HG00140_ch_T0001566;gene_name=SLC25A15P1;ID=exon:HG00140_ch_T0001566:2;Name=SLC25A15P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	24265921	24305723	.	-	.	source_gene_common_name=PARP4P1;source_gene=ENSG00000237917.1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;gene_id=HG00140_ch_G0000544;gene_biotype=unprocessed_pseudogene;gene_name=PARP4P1;gene_sources=liftoff;ID=HG00140_ch_G0000544;Name=PARP4P1
HG00140_chrY	CAT	transcript	24265921	24305723	1000	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=HG00140_ch_T0001567;gene_id=HG00140_ch_G0000544;Parent=HG00140_ch_G0000544;transcript_name=HG00140_ch_T0001567;gene_name=PARP4P1;ID=HG00140_ch_T0001567;Name=PARP4P1
HG00140_chrY	CAT	exon	24265921	24266115	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=HG00140_ch_T0001567;gene_id=HG00140_ch_G0000544;Parent=HG00140_ch_T0001567;transcript_name=HG00140_ch_T0001567;gene_name=PARP4P1;ID=exon:HG00140_ch_T0001567:0;Name=PARP4P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24266116	24271960	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=HG00140_ch_T0001567;gene_id=HG00140_ch_G0000544;Parent=HG00140_ch_T0001567;transcript_name=HG00140_ch_T0001567;gene_name=PARP4P1;ID=intron:HG00140_ch_T0001567:0;Name=PARP4P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24271961	24272092	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=HG00140_ch_T0001567;gene_id=HG00140_ch_G0000544;Parent=HG00140_ch_T0001567;transcript_name=HG00140_ch_T0001567;gene_name=PARP4P1;ID=exon:HG00140_ch_T0001567:1;Name=PARP4P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24272093	24282783	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=HG00140_ch_T0001567;gene_id=HG00140_ch_G0000544;Parent=HG00140_ch_T0001567;transcript_name=HG00140_ch_T0001567;gene_name=PARP4P1;ID=intron:HG00140_ch_T0001567:1;Name=PARP4P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24282784	24282878	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=HG00140_ch_T0001567;gene_id=HG00140_ch_G0000544;Parent=HG00140_ch_T0001567;transcript_name=HG00140_ch_T0001567;gene_name=PARP4P1;ID=exon:HG00140_ch_T0001567:2;Name=PARP4P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24282879	24285224	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=HG00140_ch_T0001567;gene_id=HG00140_ch_G0000544;Parent=HG00140_ch_T0001567;transcript_name=HG00140_ch_T0001567;gene_name=PARP4P1;ID=intron:HG00140_ch_T0001567:2;Name=PARP4P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24285225	24286033	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=HG00140_ch_T0001567;gene_id=HG00140_ch_G0000544;Parent=HG00140_ch_T0001567;transcript_name=HG00140_ch_T0001567;gene_name=PARP4P1;ID=exon:HG00140_ch_T0001567:3;Name=PARP4P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24286034	24286364	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=HG00140_ch_T0001567;gene_id=HG00140_ch_G0000544;Parent=HG00140_ch_T0001567;transcript_name=HG00140_ch_T0001567;gene_name=PARP4P1;ID=intron:HG00140_ch_T0001567:3;Name=PARP4P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24286365	24286602	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=HG00140_ch_T0001567;gene_id=HG00140_ch_G0000544;Parent=HG00140_ch_T0001567;transcript_name=HG00140_ch_T0001567;gene_name=PARP4P1;ID=exon:HG00140_ch_T0001567:4;Name=PARP4P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24286603	24292844	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=HG00140_ch_T0001567;gene_id=HG00140_ch_G0000544;Parent=HG00140_ch_T0001567;transcript_name=HG00140_ch_T0001567;gene_name=PARP4P1;ID=intron:HG00140_ch_T0001567:4;Name=PARP4P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24292845	24292967	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=HG00140_ch_T0001567;gene_id=HG00140_ch_G0000544;Parent=HG00140_ch_T0001567;transcript_name=HG00140_ch_T0001567;gene_name=PARP4P1;ID=exon:HG00140_ch_T0001567:5;Name=PARP4P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24292968	24293583	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=HG00140_ch_T0001567;gene_id=HG00140_ch_G0000544;Parent=HG00140_ch_T0001567;transcript_name=HG00140_ch_T0001567;gene_name=PARP4P1;ID=intron:HG00140_ch_T0001567:5;Name=PARP4P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24293584	24293680	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=HG00140_ch_T0001567;gene_id=HG00140_ch_G0000544;Parent=HG00140_ch_T0001567;transcript_name=HG00140_ch_T0001567;gene_name=PARP4P1;ID=exon:HG00140_ch_T0001567:6;Name=PARP4P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24293681	24294657	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=HG00140_ch_T0001567;gene_id=HG00140_ch_G0000544;Parent=HG00140_ch_T0001567;transcript_name=HG00140_ch_T0001567;gene_name=PARP4P1;ID=intron:HG00140_ch_T0001567:6;Name=PARP4P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24294658	24294738	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=HG00140_ch_T0001567;gene_id=HG00140_ch_G0000544;Parent=HG00140_ch_T0001567;transcript_name=HG00140_ch_T0001567;gene_name=PARP4P1;ID=exon:HG00140_ch_T0001567:7;Name=PARP4P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24294739	24299014	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=HG00140_ch_T0001567;gene_id=HG00140_ch_G0000544;Parent=HG00140_ch_T0001567;transcript_name=HG00140_ch_T0001567;gene_name=PARP4P1;ID=intron:HG00140_ch_T0001567:7;Name=PARP4P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24299015	24299094	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=HG00140_ch_T0001567;gene_id=HG00140_ch_G0000544;Parent=HG00140_ch_T0001567;transcript_name=HG00140_ch_T0001567;gene_name=PARP4P1;ID=exon:HG00140_ch_T0001567:8;Name=PARP4P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24299095	24299342	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=HG00140_ch_T0001567;gene_id=HG00140_ch_G0000544;Parent=HG00140_ch_T0001567;transcript_name=HG00140_ch_T0001567;gene_name=PARP4P1;ID=intron:HG00140_ch_T0001567:8;Name=PARP4P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24299343	24299509	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=HG00140_ch_T0001567;gene_id=HG00140_ch_G0000544;Parent=HG00140_ch_T0001567;transcript_name=HG00140_ch_T0001567;gene_name=PARP4P1;ID=exon:HG00140_ch_T0001567:9;Name=PARP4P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24299510	24301718	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=HG00140_ch_T0001567;gene_id=HG00140_ch_G0000544;Parent=HG00140_ch_T0001567;transcript_name=HG00140_ch_T0001567;gene_name=PARP4P1;ID=intron:HG00140_ch_T0001567:9;Name=PARP4P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24301719	24301821	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=HG00140_ch_T0001567;gene_id=HG00140_ch_G0000544;Parent=HG00140_ch_T0001567;transcript_name=HG00140_ch_T0001567;gene_name=PARP4P1;ID=exon:HG00140_ch_T0001567:10;Name=PARP4P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24301822	24304415	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=HG00140_ch_T0001567;gene_id=HG00140_ch_G0000544;Parent=HG00140_ch_T0001567;transcript_name=HG00140_ch_T0001567;gene_name=PARP4P1;ID=intron:HG00140_ch_T0001567:10;Name=PARP4P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24304416	24304502	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=HG00140_ch_T0001567;gene_id=HG00140_ch_G0000544;Parent=HG00140_ch_T0001567;transcript_name=HG00140_ch_T0001567;gene_name=PARP4P1;ID=exon:HG00140_ch_T0001567:11;Name=PARP4P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	24304503	24305593	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=HG00140_ch_T0001567;gene_id=HG00140_ch_G0000544;Parent=HG00140_ch_T0001567;transcript_name=HG00140_ch_T0001567;gene_name=PARP4P1;ID=intron:HG00140_ch_T0001567:11;Name=PARP4P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	24305594	24305723	.	-	.	source_transcript=ENST00000435945.1;source_transcript_name=PARP4P1-201;source_gene=ENSG00000237917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435945.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435945.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PARP4P1;alternative_source_transcripts=ENST00000435945.1,ENST00000435945.1;transcript_id=HG00140_ch_T0001567;gene_id=HG00140_ch_G0000544;Parent=HG00140_ch_T0001567;transcript_name=HG00140_ch_T0001567;gene_name=PARP4P1;ID=exon:HG00140_ch_T0001567:12;Name=PARP4P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	24297592	24298231	.	-	.	source_gene_common_name=CCNQP2;source_gene=ENSG00000231514.1;alternative_source_transcripts=ENST00000435741.1,ENST00000435741.1;gene_id=HG00140_ch_G0000545;gene_biotype=processed_pseudogene;gene_name=CCNQP2;gene_sources=liftoff;ID=HG00140_ch_G0000545;Name=CCNQP2
HG00140_chrY	CAT	transcript	24297592	24298231	1000	-	.	source_transcript=ENST00000435741.1;source_transcript_name=CCNQP2-201;source_gene=ENSG00000231514.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000231514.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000435741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435741.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CCNQP2;alternative_source_transcripts=ENST00000435741.1,ENST00000435741.1;transcript_id=HG00140_ch_T0001568;gene_id=HG00140_ch_G0000545;Parent=HG00140_ch_G0000545;transcript_name=HG00140_ch_T0001568;gene_name=CCNQP2;ID=HG00140_ch_T0001568;Name=CCNQP2
HG00140_chrY	CAT	exon	24297592	24298231	.	-	.	source_transcript=ENST00000435741.1;source_transcript_name=CCNQP2-201;source_gene=ENSG00000231514.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000231514.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000435741.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435741.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CCNQP2;alternative_source_transcripts=ENST00000435741.1,ENST00000435741.1;transcript_id=HG00140_ch_T0001568;gene_id=HG00140_ch_G0000545;Parent=HG00140_ch_T0001568;transcript_name=HG00140_ch_T0001568;gene_name=CCNQP2;ID=exon:HG00140_ch_T0001568:0;Name=CCNQP2;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	66140850	66141094	.	+	.	source_gene_common_name=CTBP2P1;source_gene=ENSG00000235857.1;alternative_source_transcripts=ENST00000431853.1,ENST00000431853.1;gene_id=HG00140_ch_G0000546;gene_biotype=processed_pseudogene;gene_name=CTBP2P1;gene_sources=liftoff;ID=HG00140_ch_G0000546;Name=CTBP2P1
HG00140_chrY	CAT	transcript	66140850	66141094	1000	+	.	source_transcript=ENST00000431853.1;source_transcript_name=CTBP2P1-201;source_gene=ENSG00000235857.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000235857.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000431853.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431853.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CTBP2P1;alternative_source_transcripts=ENST00000431853.1,ENST00000431853.1;transcript_id=HG00140_ch_T0001569;gene_id=HG00140_ch_G0000546;Parent=HG00140_ch_G0000546;transcript_name=HG00140_ch_T0001569;gene_name=CTBP2P1;ID=HG00140_ch_T0001569;Name=CTBP2P1
HG00140_chrY	CAT	exon	66140850	66141094	.	+	.	source_transcript=ENST00000431853.1;source_transcript_name=CTBP2P1-201;source_gene=ENSG00000235857.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000235857.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000431853.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431853.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CTBP2P1;alternative_source_transcripts=ENST00000431853.1,ENST00000431853.1;transcript_id=HG00140_ch_T0001569;gene_id=HG00140_ch_G0000546;Parent=HG00140_ch_T0001569;transcript_name=HG00140_ch_T0001569;gene_name=CTBP2P1;ID=exon:HG00140_ch_T0001569:0;Name=CTBP2P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	66167442	66167708	.	+	.	source_gene_common_name=ENSG00000305394;source_gene=ENSG00000305394.1;alternative_source_transcripts=ENST00000810723.1,ENST00000810723.1;gene_id=HG00140_ch_G0000547;gene_biotype=lncRNA;gene_name=ENSG00000305394;gene_sources=liftoff;ID=HG00140_ch_G0000547;Name=ENSG00000305394
HG00140_chrY	CAT	transcript	66167442	66167708	1000	+	.	source_transcript=ENST00000810723.1;source_transcript_name=ENST00000810723;source_gene=ENSG00000305394.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305394.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000810723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000810723.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305394;alternative_source_transcripts=ENST00000810723.1,ENST00000810723.1;transcript_id=HG00140_ch_T0001570;gene_id=HG00140_ch_G0000547;Parent=HG00140_ch_G0000547;transcript_name=HG00140_ch_T0001570;gene_name=ENSG00000305394;ID=HG00140_ch_T0001570;Name=ENSG00000305394
HG00140_chrY	CAT	exon	66167442	66167708	.	+	.	source_transcript=ENST00000810723.1;source_transcript_name=ENST00000810723;source_gene=ENSG00000305394.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305394.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000810723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000810723.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305394;alternative_source_transcripts=ENST00000810723.1,ENST00000810723.1;transcript_id=HG00140_ch_T0001570;gene_id=HG00140_ch_G0000547;Parent=HG00140_ch_T0001570;transcript_name=HG00140_ch_T0001570;gene_name=ENSG00000305394;ID=exon:HG00140_ch_T0001570:0;Name=ENSG00000305394;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	66205057	66239690	.	-	.	source_gene_common_name=ENSG00000310550;source_gene=ENSG00000310550.1;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;gene_id=HG00140_ch_G0000548;gene_biotype=lncRNA;gene_name=ENSG00000310550;gene_sources=liftoff;ID=HG00140_ch_G0000548;Name=ENSG00000310550
HG00140_chrY	CAT	transcript	66205057	66239695	1000	-	.	source_transcript=ENST00000850721.1;source_transcript_name=ENST00000850721;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850721.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;transcript_id=HG00140_ch_T0001571;gene_id=HG00140_ch_G0000548;Parent=HG00140_ch_G0000548;transcript_name=HG00140_ch_T0001571;gene_name=ENSG00000310550;ID=HG00140_ch_T0001571;Name=ENSG00000310550
HG00140_chrY	CAT	exon	66205057	66205160	.	-	.	source_transcript=ENST00000850721.1;source_transcript_name=ENST00000850721;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850721.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;transcript_id=HG00140_ch_T0001571;gene_id=HG00140_ch_G0000548;Parent=HG00140_ch_T0001571;transcript_name=HG00140_ch_T0001571;gene_name=ENSG00000310550;ID=exon:HG00140_ch_T0001571:0;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66205161	66209366	.	-	.	source_transcript=ENST00000850721.1;source_transcript_name=ENST00000850721;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850721.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;transcript_id=HG00140_ch_T0001571;gene_id=HG00140_ch_G0000548;Parent=HG00140_ch_T0001571;transcript_name=HG00140_ch_T0001571;gene_name=ENSG00000310550;ID=intron:HG00140_ch_T0001571:0;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66209367	66209502	.	-	.	source_transcript=ENST00000850721.1;source_transcript_name=ENST00000850721;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850721.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;transcript_id=HG00140_ch_T0001571;gene_id=HG00140_ch_G0000548;Parent=HG00140_ch_T0001571;transcript_name=HG00140_ch_T0001571;gene_name=ENSG00000310550;ID=exon:HG00140_ch_T0001571:1;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66209503	66211696	.	-	.	source_transcript=ENST00000850721.1;source_transcript_name=ENST00000850721;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850721.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;transcript_id=HG00140_ch_T0001571;gene_id=HG00140_ch_G0000548;Parent=HG00140_ch_T0001571;transcript_name=HG00140_ch_T0001571;gene_name=ENSG00000310550;ID=intron:HG00140_ch_T0001571:1;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66211697	66211873	.	-	.	source_transcript=ENST00000850721.1;source_transcript_name=ENST00000850721;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850721.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;transcript_id=HG00140_ch_T0001571;gene_id=HG00140_ch_G0000548;Parent=HG00140_ch_T0001571;transcript_name=HG00140_ch_T0001571;gene_name=ENSG00000310550;ID=exon:HG00140_ch_T0001571:2;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66211874	66230652	.	-	.	source_transcript=ENST00000850721.1;source_transcript_name=ENST00000850721;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850721.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;transcript_id=HG00140_ch_T0001571;gene_id=HG00140_ch_G0000548;Parent=HG00140_ch_T0001571;transcript_name=HG00140_ch_T0001571;gene_name=ENSG00000310550;ID=intron:HG00140_ch_T0001571:2;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66230653	66230803	.	-	.	source_transcript=ENST00000850721.1;source_transcript_name=ENST00000850721;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850721.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;transcript_id=HG00140_ch_T0001571;gene_id=HG00140_ch_G0000548;Parent=HG00140_ch_T0001571;transcript_name=HG00140_ch_T0001571;gene_name=ENSG00000310550;ID=exon:HG00140_ch_T0001571:3;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66230804	66239566	.	-	.	source_transcript=ENST00000850721.1;source_transcript_name=ENST00000850721;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850721.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;transcript_id=HG00140_ch_T0001571;gene_id=HG00140_ch_G0000548;Parent=HG00140_ch_T0001571;transcript_name=HG00140_ch_T0001571;gene_name=ENSG00000310550;ID=intron:HG00140_ch_T0001571:3;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66239567	66239695	.	-	.	source_transcript=ENST00000850721.1;source_transcript_name=ENST00000850721;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850721.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850721.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850721.1,ENST00000850721.1;transcript_id=HG00140_ch_T0001571;gene_id=HG00140_ch_G0000548;Parent=HG00140_ch_T0001571;transcript_name=HG00140_ch_T0001571;gene_name=ENSG00000310550;ID=exon:HG00140_ch_T0001571:4;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	66205064	66239690	1000	-	.	source_transcript=ENST00000850722.1;source_transcript_name=ENST00000850722;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850722.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850722.1,ENST00000850722.1;transcript_id=HG00140_ch_T0001572;gene_id=HG00140_ch_G0000548;Parent=HG00140_ch_G0000548;transcript_name=HG00140_ch_T0001572;gene_name=ENSG00000310550;ID=HG00140_ch_T0001572;Name=ENSG00000310550
HG00140_chrY	CAT	exon	66205064	66205160	.	-	.	source_transcript=ENST00000850722.1;source_transcript_name=ENST00000850722;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850722.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850722.1,ENST00000850722.1;transcript_id=HG00140_ch_T0001572;gene_id=HG00140_ch_G0000548;Parent=HG00140_ch_T0001572;transcript_name=HG00140_ch_T0001572;gene_name=ENSG00000310550;ID=exon:HG00140_ch_T0001572:0;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66205161	66209366	.	-	.	source_transcript=ENST00000850722.1;source_transcript_name=ENST00000850722;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850722.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850722.1,ENST00000850722.1;transcript_id=HG00140_ch_T0001572;gene_id=HG00140_ch_G0000548;Parent=HG00140_ch_T0001572;transcript_name=HG00140_ch_T0001572;gene_name=ENSG00000310550;ID=intron:HG00140_ch_T0001572:0;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66209367	66209502	.	-	.	source_transcript=ENST00000850722.1;source_transcript_name=ENST00000850722;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850722.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850722.1,ENST00000850722.1;transcript_id=HG00140_ch_T0001572;gene_id=HG00140_ch_G0000548;Parent=HG00140_ch_T0001572;transcript_name=HG00140_ch_T0001572;gene_name=ENSG00000310550;ID=exon:HG00140_ch_T0001572:1;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66209503	66211696	.	-	.	source_transcript=ENST00000850722.1;source_transcript_name=ENST00000850722;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850722.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850722.1,ENST00000850722.1;transcript_id=HG00140_ch_T0001572;gene_id=HG00140_ch_G0000548;Parent=HG00140_ch_T0001572;transcript_name=HG00140_ch_T0001572;gene_name=ENSG00000310550;ID=intron:HG00140_ch_T0001572:1;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66211697	66211873	.	-	.	source_transcript=ENST00000850722.1;source_transcript_name=ENST00000850722;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850722.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850722.1,ENST00000850722.1;transcript_id=HG00140_ch_T0001572;gene_id=HG00140_ch_G0000548;Parent=HG00140_ch_T0001572;transcript_name=HG00140_ch_T0001572;gene_name=ENSG00000310550;ID=exon:HG00140_ch_T0001572:2;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66211874	66230652	.	-	.	source_transcript=ENST00000850722.1;source_transcript_name=ENST00000850722;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850722.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850722.1,ENST00000850722.1;transcript_id=HG00140_ch_T0001572;gene_id=HG00140_ch_G0000548;Parent=HG00140_ch_T0001572;transcript_name=HG00140_ch_T0001572;gene_name=ENSG00000310550;ID=intron:HG00140_ch_T0001572:2;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66230653	66230803	.	-	.	source_transcript=ENST00000850722.1;source_transcript_name=ENST00000850722;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850722.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850722.1,ENST00000850722.1;transcript_id=HG00140_ch_T0001572;gene_id=HG00140_ch_G0000548;Parent=HG00140_ch_T0001572;transcript_name=HG00140_ch_T0001572;gene_name=ENSG00000310550;ID=exon:HG00140_ch_T0001572:3;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66230804	66239595	.	-	.	source_transcript=ENST00000850722.1;source_transcript_name=ENST00000850722;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850722.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850722.1,ENST00000850722.1;transcript_id=HG00140_ch_T0001572;gene_id=HG00140_ch_G0000548;Parent=HG00140_ch_T0001572;transcript_name=HG00140_ch_T0001572;gene_name=ENSG00000310550;ID=intron:HG00140_ch_T0001572:3;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66239596	66239690	.	-	.	source_transcript=ENST00000850722.1;source_transcript_name=ENST00000850722;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850722.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850722.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850722.1,ENST00000850722.1;transcript_id=HG00140_ch_T0001572;gene_id=HG00140_ch_G0000548;Parent=HG00140_ch_T0001572;transcript_name=HG00140_ch_T0001572;gene_name=ENSG00000310550;ID=exon:HG00140_ch_T0001572:4;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	66205067	66239690	1000	-	.	source_transcript=ENST00000850723.1;source_transcript_name=ENST00000850723;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850723.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850723.1,ENST00000850723.1;transcript_id=HG00140_ch_T0001573;gene_id=HG00140_ch_G0000548;Parent=HG00140_ch_G0000548;transcript_name=HG00140_ch_T0001573;gene_name=ENSG00000310550;ID=HG00140_ch_T0001573;Name=ENSG00000310550
HG00140_chrY	CAT	exon	66205067	66205160	.	-	.	source_transcript=ENST00000850723.1;source_transcript_name=ENST00000850723;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850723.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850723.1,ENST00000850723.1;transcript_id=HG00140_ch_T0001573;gene_id=HG00140_ch_G0000548;Parent=HG00140_ch_T0001573;transcript_name=HG00140_ch_T0001573;gene_name=ENSG00000310550;ID=exon:HG00140_ch_T0001573:0;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66205161	66209366	.	-	.	source_transcript=ENST00000850723.1;source_transcript_name=ENST00000850723;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850723.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850723.1,ENST00000850723.1;transcript_id=HG00140_ch_T0001573;gene_id=HG00140_ch_G0000548;Parent=HG00140_ch_T0001573;transcript_name=HG00140_ch_T0001573;gene_name=ENSG00000310550;ID=intron:HG00140_ch_T0001573:0;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66209367	66209502	.	-	.	source_transcript=ENST00000850723.1;source_transcript_name=ENST00000850723;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850723.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850723.1,ENST00000850723.1;transcript_id=HG00140_ch_T0001573;gene_id=HG00140_ch_G0000548;Parent=HG00140_ch_T0001573;transcript_name=HG00140_ch_T0001573;gene_name=ENSG00000310550;ID=exon:HG00140_ch_T0001573:1;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66209503	66211533	.	-	.	source_transcript=ENST00000850723.1;source_transcript_name=ENST00000850723;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850723.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850723.1,ENST00000850723.1;transcript_id=HG00140_ch_T0001573;gene_id=HG00140_ch_G0000548;Parent=HG00140_ch_T0001573;transcript_name=HG00140_ch_T0001573;gene_name=ENSG00000310550;ID=intron:HG00140_ch_T0001573:1;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66211534	66211873	.	-	.	source_transcript=ENST00000850723.1;source_transcript_name=ENST00000850723;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850723.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850723.1,ENST00000850723.1;transcript_id=HG00140_ch_T0001573;gene_id=HG00140_ch_G0000548;Parent=HG00140_ch_T0001573;transcript_name=HG00140_ch_T0001573;gene_name=ENSG00000310550;ID=exon:HG00140_ch_T0001573:2;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66211874	66239566	.	-	.	source_transcript=ENST00000850723.1;source_transcript_name=ENST00000850723;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850723.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850723.1,ENST00000850723.1;transcript_id=HG00140_ch_T0001573;gene_id=HG00140_ch_G0000548;Parent=HG00140_ch_T0001573;transcript_name=HG00140_ch_T0001573;gene_name=ENSG00000310550;ID=intron:HG00140_ch_T0001573:2;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66239567	66239690	.	-	.	source_transcript=ENST00000850723.1;source_transcript_name=ENST00000850723;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850723.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850723.1,ENST00000850723.1;transcript_id=HG00140_ch_T0001573;gene_id=HG00140_ch_G0000548;Parent=HG00140_ch_T0001573;transcript_name=HG00140_ch_T0001573;gene_name=ENSG00000310550;ID=exon:HG00140_ch_T0001573:3;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	66205067	66239636	1000	-	.	source_transcript=ENST00000850724.1;source_transcript_name=ENST00000850724;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850724.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850724.1,ENST00000850724.1;transcript_id=HG00140_ch_T0001574;gene_id=HG00140_ch_G0000548;Parent=HG00140_ch_G0000548;transcript_name=HG00140_ch_T0001574;gene_name=ENSG00000310550;ID=HG00140_ch_T0001574;Name=ENSG00000310550
HG00140_chrY	CAT	exon	66205067	66205160	.	-	.	source_transcript=ENST00000850724.1;source_transcript_name=ENST00000850724;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850724.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850724.1,ENST00000850724.1;transcript_id=HG00140_ch_T0001574;gene_id=HG00140_ch_G0000548;Parent=HG00140_ch_T0001574;transcript_name=HG00140_ch_T0001574;gene_name=ENSG00000310550;ID=exon:HG00140_ch_T0001574:0;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66205161	66209366	.	-	.	source_transcript=ENST00000850724.1;source_transcript_name=ENST00000850724;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850724.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850724.1,ENST00000850724.1;transcript_id=HG00140_ch_T0001574;gene_id=HG00140_ch_G0000548;Parent=HG00140_ch_T0001574;transcript_name=HG00140_ch_T0001574;gene_name=ENSG00000310550;ID=intron:HG00140_ch_T0001574:0;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66209367	66209502	.	-	.	source_transcript=ENST00000850724.1;source_transcript_name=ENST00000850724;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850724.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850724.1,ENST00000850724.1;transcript_id=HG00140_ch_T0001574;gene_id=HG00140_ch_G0000548;Parent=HG00140_ch_T0001574;transcript_name=HG00140_ch_T0001574;gene_name=ENSG00000310550;ID=exon:HG00140_ch_T0001574:1;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66209503	66211696	.	-	.	source_transcript=ENST00000850724.1;source_transcript_name=ENST00000850724;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850724.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850724.1,ENST00000850724.1;transcript_id=HG00140_ch_T0001574;gene_id=HG00140_ch_G0000548;Parent=HG00140_ch_T0001574;transcript_name=HG00140_ch_T0001574;gene_name=ENSG00000310550;ID=intron:HG00140_ch_T0001574:1;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66211697	66211873	.	-	.	source_transcript=ENST00000850724.1;source_transcript_name=ENST00000850724;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850724.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850724.1,ENST00000850724.1;transcript_id=HG00140_ch_T0001574;gene_id=HG00140_ch_G0000548;Parent=HG00140_ch_T0001574;transcript_name=HG00140_ch_T0001574;gene_name=ENSG00000310550;ID=exon:HG00140_ch_T0001574:2;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66211874	66239566	.	-	.	source_transcript=ENST00000850724.1;source_transcript_name=ENST00000850724;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850724.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850724.1,ENST00000850724.1;transcript_id=HG00140_ch_T0001574;gene_id=HG00140_ch_G0000548;Parent=HG00140_ch_T0001574;transcript_name=HG00140_ch_T0001574;gene_name=ENSG00000310550;ID=intron:HG00140_ch_T0001574:2;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66239567	66239636	.	-	.	source_transcript=ENST00000850724.1;source_transcript_name=ENST00000850724;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850724.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850724.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850724.1,ENST00000850724.1;transcript_id=HG00140_ch_T0001574;gene_id=HG00140_ch_G0000548;Parent=HG00140_ch_T0001574;transcript_name=HG00140_ch_T0001574;gene_name=ENSG00000310550;ID=exon:HG00140_ch_T0001574:3;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	66238710	66239782	1000	-	.	source_transcript=ENST00000850725.1;source_transcript_name=ENST00000850725;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850725.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850725.1,ENST00000850725.1;transcript_id=HG00140_ch_T0001575;gene_id=HG00140_ch_G0000548;Parent=HG00140_ch_G0000548;transcript_name=HG00140_ch_T0001575;gene_name=ENSG00000310550;ID=HG00140_ch_T0001575;Name=ENSG00000310550
HG00140_chrY	CAT	exon	66238710	66238922	.	-	.	source_transcript=ENST00000850725.1;source_transcript_name=ENST00000850725;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850725.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850725.1,ENST00000850725.1;transcript_id=HG00140_ch_T0001575;gene_id=HG00140_ch_G0000548;Parent=HG00140_ch_T0001575;transcript_name=HG00140_ch_T0001575;gene_name=ENSG00000310550;ID=exon:HG00140_ch_T0001575:0;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66238923	66239237	.	-	.	source_transcript=ENST00000850725.1;source_transcript_name=ENST00000850725;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850725.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850725.1,ENST00000850725.1;transcript_id=HG00140_ch_T0001575;gene_id=HG00140_ch_G0000548;Parent=HG00140_ch_T0001575;transcript_name=HG00140_ch_T0001575;gene_name=ENSG00000310550;ID=intron:HG00140_ch_T0001575:0;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66239238	66239327	.	-	.	source_transcript=ENST00000850725.1;source_transcript_name=ENST00000850725;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850725.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850725.1,ENST00000850725.1;transcript_id=HG00140_ch_T0001575;gene_id=HG00140_ch_G0000548;Parent=HG00140_ch_T0001575;transcript_name=HG00140_ch_T0001575;gene_name=ENSG00000310550;ID=exon:HG00140_ch_T0001575:1;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66239328	66239566	.	-	.	source_transcript=ENST00000850725.1;source_transcript_name=ENST00000850725;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850725.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850725.1,ENST00000850725.1;transcript_id=HG00140_ch_T0001575;gene_id=HG00140_ch_G0000548;Parent=HG00140_ch_T0001575;transcript_name=HG00140_ch_T0001575;gene_name=ENSG00000310550;ID=intron:HG00140_ch_T0001575:1;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66239567	66239782	.	-	.	source_transcript=ENST00000850725.1;source_transcript_name=ENST00000850725;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850725.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850725.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850725.1,ENST00000850725.1;transcript_id=HG00140_ch_T0001575;gene_id=HG00140_ch_G0000548;Parent=HG00140_ch_T0001575;transcript_name=HG00140_ch_T0001575;gene_name=ENSG00000310550;ID=exon:HG00140_ch_T0001575:2;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	66238720	66239667	1000	-	.	source_transcript=ENST00000850726.1;source_transcript_name=ENST00000850726;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850726.1;transcript_score=299.842;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850726.1,ENST00000850726.1;transcript_id=HG00140_ch_T0001576;gene_id=HG00140_ch_G0000548;Parent=HG00140_ch_G0000548;transcript_name=HG00140_ch_T0001576;gene_name=ENSG00000310550;ID=HG00140_ch_T0001576;Name=ENSG00000310550
HG00140_chrY	CAT	exon	66238720	66238922	.	-	.	source_transcript=ENST00000850726.1;source_transcript_name=ENST00000850726;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850726.1;transcript_score=299.842;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850726.1,ENST00000850726.1;transcript_id=HG00140_ch_T0001576;gene_id=HG00140_ch_G0000548;Parent=HG00140_ch_T0001576;transcript_name=HG00140_ch_T0001576;gene_name=ENSG00000310550;ID=exon:HG00140_ch_T0001576:0;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66238923	66239237	.	-	.	source_transcript=ENST00000850726.1;source_transcript_name=ENST00000850726;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850726.1;transcript_score=299.842;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850726.1,ENST00000850726.1;transcript_id=HG00140_ch_T0001576;gene_id=HG00140_ch_G0000548;Parent=HG00140_ch_T0001576;transcript_name=HG00140_ch_T0001576;gene_name=ENSG00000310550;ID=intron:HG00140_ch_T0001576:0;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66239238	66239667	.	-	.	source_transcript=ENST00000850726.1;source_transcript_name=ENST00000850726;source_gene=ENSG00000310550.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310550.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850726.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850726.1;transcript_score=299.842;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310550;alternative_source_transcripts=ENST00000850726.1,ENST00000850726.1;transcript_id=HG00140_ch_T0001576;gene_id=HG00140_ch_G0000548;Parent=HG00140_ch_T0001576;transcript_name=HG00140_ch_T0001576;gene_name=ENSG00000310550;ID=exon:HG00140_ch_T0001576:1;Name=ENSG00000310550;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	66276865	66277743	.	-	.	source_gene_common_name=TRPC6P1;source_gene=ENSG00000292368.1;gene_id=HG00140_ch_G0000549;gene_biotype=processed_pseudogene;gene_name=TRPC6P1;gene_sources=liftoff;ID=HG00140_ch_G0000549;Name=TRPC6P1
HG00140_chrY	CAT	transcript	66276865	66277743	1000	-	.	source_transcript=ENST00000711267.1;source_transcript_name=TRPC6P1-202;source_gene=ENSG00000292368.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292368.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711267.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711267.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRPC6P1;transcript_id=HG00140_ch_T0001577;gene_id=HG00140_ch_G0000549;Parent=HG00140_ch_G0000549;transcript_name=HG00140_ch_T0001577;gene_name=TRPC6P1;ID=HG00140_ch_T0001577;Name=TRPC6P1
HG00140_chrY	CAT	exon	66276865	66277743	.	-	.	source_transcript=ENST00000711267.1;source_transcript_name=TRPC6P1-202;source_gene=ENSG00000292368.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292368.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711267.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711267.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRPC6P1;transcript_id=HG00140_ch_T0001577;gene_id=HG00140_ch_G0000549;Parent=HG00140_ch_T0001577;transcript_name=HG00140_ch_T0001577;gene_name=TRPC6P1;ID=exon:HG00140_ch_T0001577:0;Name=TRPC6P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	66303510	66304501	.	-	.	source_gene_common_name=AMD1P2;source_gene=ENSG00000292364.1;alternative_source_transcripts=ENST00000711258.1,ENST00000711258.1;gene_id=HG00140_ch_G0000550;gene_biotype=processed_pseudogene;gene_name=AMD1P2;gene_sources=liftoff;ID=HG00140_ch_G0000550;Name=AMD1P2
HG00140_chrY	CAT	transcript	66303510	66304501	1000	-	.	source_transcript=ENST00000711258.1;source_transcript_name=AMD1P2-202;source_gene=ENSG00000292364.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292364.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711258.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711258.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMD1P2;alternative_source_transcripts=ENST00000711258.1,ENST00000711258.1;transcript_id=HG00140_ch_T0001578;gene_id=HG00140_ch_G0000550;Parent=HG00140_ch_G0000550;transcript_name=HG00140_ch_T0001578;gene_name=AMD1P2;ID=HG00140_ch_T0001578;Name=AMD1P2
HG00140_chrY	CAT	exon	66303510	66304501	.	-	.	source_transcript=ENST00000711258.1;source_transcript_name=AMD1P2-202;source_gene=ENSG00000292364.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292364.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711258.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711258.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMD1P2;alternative_source_transcripts=ENST00000711258.1,ENST00000711258.1;transcript_id=HG00140_ch_T0001578;gene_id=HG00140_ch_G0000550;Parent=HG00140_ch_T0001578;transcript_name=HG00140_ch_T0001578;gene_name=AMD1P2;ID=exon:HG00140_ch_T0001578:0;Name=AMD1P2;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	66350620	66350869	.	+	.	source_gene_common_name=DPH3P2;source_gene=ENSG00000292365.1;alternative_source_transcripts=ENST00000711259.1,ENST00000711259.1;gene_id=HG00140_ch_G0000551;gene_biotype=processed_pseudogene;gene_name=DPH3P2;gene_sources=liftoff;ID=HG00140_ch_G0000551;Name=DPH3P2
HG00140_chrY	CAT	transcript	66350620	66350869	1000	+	.	source_transcript=ENST00000711259.1;source_transcript_name=DPH3P2-202;source_gene=ENSG00000292365.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292365.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711259.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711259.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DPH3P2;alternative_source_transcripts=ENST00000711259.1,ENST00000711259.1;transcript_id=HG00140_ch_T0001579;gene_id=HG00140_ch_G0000551;Parent=HG00140_ch_G0000551;transcript_name=HG00140_ch_T0001579;gene_name=DPH3P2;ID=HG00140_ch_T0001579;Name=DPH3P2
HG00140_chrY	CAT	exon	66350620	66350869	.	+	.	source_transcript=ENST00000711259.1;source_transcript_name=DPH3P2-202;source_gene=ENSG00000292365.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292365.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711259.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711259.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DPH3P2;alternative_source_transcripts=ENST00000711259.1,ENST00000711259.1;transcript_id=HG00140_ch_T0001579;gene_id=HG00140_ch_G0000551;Parent=HG00140_ch_T0001579;transcript_name=HG00140_ch_T0001579;gene_name=DPH3P2;ID=exon:HG00140_ch_T0001579:0;Name=DPH3P2;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	66356329	66418763	.	+	.	source_gene_common_name=VAMP7;source_gene=ENSG00000292366.1;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;gene_id=HG00140_ch_G0000552;gene_biotype=protein_coding;gene_name=VAMP7;gene_sources=liftoff;ID=HG00140_ch_G0000552;Name=VAMP7
HG00140_chrY	CAT	transcript	66356329	66418763	100	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG00140_ch_T0001580;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_G0000552;transcript_name=HG00140_ch_T0001580;gene_name=VAMP7;ID=HG00140_ch_T0001580;Name=VAMP7
HG00140_chrY	CAT	exon	66356329	66356432	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG00140_ch_T0001580;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001580;transcript_name=HG00140_ch_T0001580;gene_name=VAMP7;ID=exon:HG00140_ch_T0001580:0;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66356433	66364442	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG00140_ch_T0001580;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001580;transcript_name=HG00140_ch_T0001580;gene_name=VAMP7;ID=intron:HG00140_ch_T0001580:0;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66364443	66364597	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG00140_ch_T0001580;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001580;transcript_name=HG00140_ch_T0001580;gene_name=VAMP7;ID=exon:HG00140_ch_T0001580:1;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	66364452	66364597	.	+	0	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG00140_ch_T0001580;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001580;transcript_name=HG00140_ch_T0001580;gene_name=VAMP7;ID=CDS:HG00140_ch_T0001580:0;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	66364452	66364454	.	+	0	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG00140_ch_T0001580;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001580;transcript_name=HG00140_ch_T0001580;gene_name=VAMP7;ID=start_codon:HG00140_ch_T0001580;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66364598	66370610	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG00140_ch_T0001580;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001580;transcript_name=HG00140_ch_T0001580;gene_name=VAMP7;ID=intron:HG00140_ch_T0001580:1;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66370611	66370668	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG00140_ch_T0001580;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001580;transcript_name=HG00140_ch_T0001580;gene_name=VAMP7;ID=exon:HG00140_ch_T0001580:2;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	66370611	66370668	.	+	1	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG00140_ch_T0001580;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001580;transcript_name=HG00140_ch_T0001580;gene_name=VAMP7;ID=CDS:HG00140_ch_T0001580:1;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66370669	66373099	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG00140_ch_T0001580;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001580;transcript_name=HG00140_ch_T0001580;gene_name=VAMP7;ID=intron:HG00140_ch_T0001580:2;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66373100	66373237	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG00140_ch_T0001580;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001580;transcript_name=HG00140_ch_T0001580;gene_name=VAMP7;ID=exon:HG00140_ch_T0001580:3;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	66373100	66373237	.	+	0	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG00140_ch_T0001580;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001580;transcript_name=HG00140_ch_T0001580;gene_name=VAMP7;ID=CDS:HG00140_ch_T0001580:2;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66373238	66375486	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG00140_ch_T0001580;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001580;transcript_name=HG00140_ch_T0001580;gene_name=VAMP7;ID=intron:HG00140_ch_T0001580:3;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66375487	66375577	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG00140_ch_T0001580;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001580;transcript_name=HG00140_ch_T0001580;gene_name=VAMP7;ID=exon:HG00140_ch_T0001580:4;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	66375487	66375577	.	+	0	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG00140_ch_T0001580;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001580;transcript_name=HG00140_ch_T0001580;gene_name=VAMP7;ID=CDS:HG00140_ch_T0001580:3;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66375578	66394810	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG00140_ch_T0001580;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001580;transcript_name=HG00140_ch_T0001580;gene_name=VAMP7;ID=intron:HG00140_ch_T0001580:4;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66394811	66394878	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG00140_ch_T0001580;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001580;transcript_name=HG00140_ch_T0001580;gene_name=VAMP7;ID=exon:HG00140_ch_T0001580:5;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	66394811	66394878	.	+	2	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG00140_ch_T0001580;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001580;transcript_name=HG00140_ch_T0001580;gene_name=VAMP7;ID=CDS:HG00140_ch_T0001580:4;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66394879	66414695	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG00140_ch_T0001580;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001580;transcript_name=HG00140_ch_T0001580;gene_name=VAMP7;ID=intron:HG00140_ch_T0001580:5;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66414696	66414788	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG00140_ch_T0001580;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001580;transcript_name=HG00140_ch_T0001580;gene_name=VAMP7;ID=exon:HG00140_ch_T0001580:6;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	66414696	66414788	.	+	0	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG00140_ch_T0001580;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001580;transcript_name=HG00140_ch_T0001580;gene_name=VAMP7;ID=CDS:HG00140_ch_T0001580:5;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66414789	66416876	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG00140_ch_T0001580;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001580;transcript_name=HG00140_ch_T0001580;gene_name=VAMP7;ID=intron:HG00140_ch_T0001580:6;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66416877	66418763	.	+	.	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG00140_ch_T0001580;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001580;transcript_name=HG00140_ch_T0001580;gene_name=VAMP7;ID=exon:HG00140_ch_T0001580:7;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	66416877	66416945	.	+	0	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG00140_ch_T0001580;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001580;transcript_name=HG00140_ch_T0001580;gene_name=VAMP7;ID=CDS:HG00140_ch_T0001580:6;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	66416943	66416945	.	+	0	source_transcript=ENST00000711260.1;source_transcript_name=VAMP7-207;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711260.1,ENST00000711260.1;transcript_id=HG00140_ch_T0001580;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001580;transcript_name=HG00140_ch_T0001580;gene_name=VAMP7;ID=stop_codon:HG00140_ch_T0001580;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	66356342	66416903	1000	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=HG00140_ch_T0001581;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_G0000552;transcript_name=HG00140_ch_T0001581;gene_name=VAMP7;ID=HG00140_ch_T0001581;Name=VAMP7
HG00140_chrY	CAT	exon	66356342	66356432	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=HG00140_ch_T0001581;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001581;transcript_name=HG00140_ch_T0001581;gene_name=VAMP7;ID=exon:HG00140_ch_T0001581:0;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66356433	66364442	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=HG00140_ch_T0001581;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001581;transcript_name=HG00140_ch_T0001581;gene_name=VAMP7;ID=intron:HG00140_ch_T0001581:0;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66364443	66364618	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=HG00140_ch_T0001581;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001581;transcript_name=HG00140_ch_T0001581;gene_name=VAMP7;ID=exon:HG00140_ch_T0001581:1;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66364619	66370610	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=HG00140_ch_T0001581;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001581;transcript_name=HG00140_ch_T0001581;gene_name=VAMP7;ID=intron:HG00140_ch_T0001581:1;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66370611	66370668	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=HG00140_ch_T0001581;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001581;transcript_name=HG00140_ch_T0001581;gene_name=VAMP7;ID=exon:HG00140_ch_T0001581:2;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66370669	66373099	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=HG00140_ch_T0001581;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001581;transcript_name=HG00140_ch_T0001581;gene_name=VAMP7;ID=intron:HG00140_ch_T0001581:2;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66373100	66373237	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=HG00140_ch_T0001581;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001581;transcript_name=HG00140_ch_T0001581;gene_name=VAMP7;ID=exon:HG00140_ch_T0001581:3;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66373238	66375486	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=HG00140_ch_T0001581;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001581;transcript_name=HG00140_ch_T0001581;gene_name=VAMP7;ID=intron:HG00140_ch_T0001581:3;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66375487	66375577	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=HG00140_ch_T0001581;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001581;transcript_name=HG00140_ch_T0001581;gene_name=VAMP7;ID=exon:HG00140_ch_T0001581:4;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66375578	66394810	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=HG00140_ch_T0001581;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001581;transcript_name=HG00140_ch_T0001581;gene_name=VAMP7;ID=intron:HG00140_ch_T0001581:4;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66394811	66394878	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=HG00140_ch_T0001581;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001581;transcript_name=HG00140_ch_T0001581;gene_name=VAMP7;ID=exon:HG00140_ch_T0001581:5;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66394879	66414695	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=HG00140_ch_T0001581;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001581;transcript_name=HG00140_ch_T0001581;gene_name=VAMP7;ID=intron:HG00140_ch_T0001581:5;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66414696	66414788	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=HG00140_ch_T0001581;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001581;transcript_name=HG00140_ch_T0001581;gene_name=VAMP7;ID=exon:HG00140_ch_T0001581:6;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66414789	66416876	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=HG00140_ch_T0001581;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001581;transcript_name=HG00140_ch_T0001581;gene_name=VAMP7;ID=intron:HG00140_ch_T0001581:6;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66416877	66416903	.	+	.	source_transcript=ENST00000711261.1;source_transcript_name=VAMP7-208;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711261.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711261.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711261.1,ENST00000711261.1;transcript_id=HG00140_ch_T0001581;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001581;transcript_name=HG00140_ch_T0001581;gene_name=VAMP7;ID=exon:HG00140_ch_T0001581:7;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	66356344	66416938	1000	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG00140_ch_T0001582;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_G0000552;transcript_name=HG00140_ch_T0001582;gene_name=VAMP7;ID=HG00140_ch_T0001582;Name=VAMP7
HG00140_chrY	CAT	exon	66356344	66356432	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG00140_ch_T0001582;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001582;transcript_name=HG00140_ch_T0001582;gene_name=VAMP7;ID=exon:HG00140_ch_T0001582:0;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66356433	66364442	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG00140_ch_T0001582;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001582;transcript_name=HG00140_ch_T0001582;gene_name=VAMP7;ID=intron:HG00140_ch_T0001582:0;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66364443	66364597	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG00140_ch_T0001582;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001582;transcript_name=HG00140_ch_T0001582;gene_name=VAMP7;ID=exon:HG00140_ch_T0001582:1;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	66364452	66364597	.	+	0	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG00140_ch_T0001582;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001582;transcript_name=HG00140_ch_T0001582;gene_name=VAMP7;ID=CDS:HG00140_ch_T0001582:0;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	66364452	66364454	.	+	0	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG00140_ch_T0001582;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001582;transcript_name=HG00140_ch_T0001582;gene_name=VAMP7;ID=start_codon:HG00140_ch_T0001582;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66364598	66373099	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG00140_ch_T0001582;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001582;transcript_name=HG00140_ch_T0001582;gene_name=VAMP7;ID=intron:HG00140_ch_T0001582:1;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66373100	66373237	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG00140_ch_T0001582;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001582;transcript_name=HG00140_ch_T0001582;gene_name=VAMP7;ID=exon:HG00140_ch_T0001582:2;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	66373100	66373133	.	+	1	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG00140_ch_T0001582;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001582;transcript_name=HG00140_ch_T0001582;gene_name=VAMP7;ID=CDS:HG00140_ch_T0001582:1;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	66373131	66373133	.	+	0	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG00140_ch_T0001582;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001582;transcript_name=HG00140_ch_T0001582;gene_name=VAMP7;ID=stop_codon:HG00140_ch_T0001582;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66373238	66375486	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG00140_ch_T0001582;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001582;transcript_name=HG00140_ch_T0001582;gene_name=VAMP7;ID=intron:HG00140_ch_T0001582:2;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66375487	66375577	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG00140_ch_T0001582;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001582;transcript_name=HG00140_ch_T0001582;gene_name=VAMP7;ID=exon:HG00140_ch_T0001582:3;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66375578	66394810	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG00140_ch_T0001582;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001582;transcript_name=HG00140_ch_T0001582;gene_name=VAMP7;ID=intron:HG00140_ch_T0001582:3;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66394811	66394878	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG00140_ch_T0001582;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001582;transcript_name=HG00140_ch_T0001582;gene_name=VAMP7;ID=exon:HG00140_ch_T0001582:4;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66394879	66414695	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG00140_ch_T0001582;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001582;transcript_name=HG00140_ch_T0001582;gene_name=VAMP7;ID=intron:HG00140_ch_T0001582:4;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66414696	66414788	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG00140_ch_T0001582;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001582;transcript_name=HG00140_ch_T0001582;gene_name=VAMP7;ID=exon:HG00140_ch_T0001582:5;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66414789	66416876	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG00140_ch_T0001582;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001582;transcript_name=HG00140_ch_T0001582;gene_name=VAMP7;ID=intron:HG00140_ch_T0001582:5;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66416877	66416938	.	+	.	source_transcript=ENST00000711262.1;source_transcript_name=VAMP7-209;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=nonsense_mediated_decay;alignment_id=ENST00000711262.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711262.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711262.1,ENST00000711262.1;transcript_id=HG00140_ch_T0001582;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001582;transcript_name=HG00140_ch_T0001582;gene_name=VAMP7;ID=exon:HG00140_ch_T0001582:6;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	66356356	66414785	1000	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=HG00140_ch_T0001583;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_G0000552;transcript_name=HG00140_ch_T0001583;gene_name=VAMP7;ID=HG00140_ch_T0001583;Name=VAMP7
HG00140_chrY	CAT	exon	66356356	66356432	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=HG00140_ch_T0001583;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001583;transcript_name=HG00140_ch_T0001583;gene_name=VAMP7;ID=exon:HG00140_ch_T0001583:0;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66356433	66364442	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=HG00140_ch_T0001583;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001583;transcript_name=HG00140_ch_T0001583;gene_name=VAMP7;ID=intron:HG00140_ch_T0001583:0;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66364443	66364593	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=HG00140_ch_T0001583;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001583;transcript_name=HG00140_ch_T0001583;gene_name=VAMP7;ID=exon:HG00140_ch_T0001583:1;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66364594	66370610	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=HG00140_ch_T0001583;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001583;transcript_name=HG00140_ch_T0001583;gene_name=VAMP7;ID=intron:HG00140_ch_T0001583:1;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66370611	66370668	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=HG00140_ch_T0001583;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001583;transcript_name=HG00140_ch_T0001583;gene_name=VAMP7;ID=exon:HG00140_ch_T0001583:2;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66370669	66373099	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=HG00140_ch_T0001583;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001583;transcript_name=HG00140_ch_T0001583;gene_name=VAMP7;ID=intron:HG00140_ch_T0001583:2;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66373100	66373237	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=HG00140_ch_T0001583;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001583;transcript_name=HG00140_ch_T0001583;gene_name=VAMP7;ID=exon:HG00140_ch_T0001583:3;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66373238	66375486	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=HG00140_ch_T0001583;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001583;transcript_name=HG00140_ch_T0001583;gene_name=VAMP7;ID=intron:HG00140_ch_T0001583:3;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66375487	66375577	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=HG00140_ch_T0001583;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001583;transcript_name=HG00140_ch_T0001583;gene_name=VAMP7;ID=exon:HG00140_ch_T0001583:4;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66375578	66394810	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=HG00140_ch_T0001583;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001583;transcript_name=HG00140_ch_T0001583;gene_name=VAMP7;ID=intron:HG00140_ch_T0001583:4;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66394811	66394878	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=HG00140_ch_T0001583;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001583;transcript_name=HG00140_ch_T0001583;gene_name=VAMP7;ID=exon:HG00140_ch_T0001583:5;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66394879	66414695	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=HG00140_ch_T0001583;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001583;transcript_name=HG00140_ch_T0001583;gene_name=VAMP7;ID=intron:HG00140_ch_T0001583:5;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66414696	66414785	.	+	.	source_transcript=ENST00000711263.1;source_transcript_name=VAMP7-210;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711263.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711263.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711263.1,ENST00000711263.1;transcript_id=HG00140_ch_T0001583;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001583;transcript_name=HG00140_ch_T0001583;gene_name=VAMP7;ID=exon:HG00140_ch_T0001583:6;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	66356359	66418763	100	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG00140_ch_T0001584;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_G0000552;transcript_name=HG00140_ch_T0001584;gene_name=VAMP7;ID=HG00140_ch_T0001584;Name=VAMP7
HG00140_chrY	CAT	exon	66356359	66356432	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG00140_ch_T0001584;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001584;transcript_name=HG00140_ch_T0001584;gene_name=VAMP7;ID=exon:HG00140_ch_T0001584:0;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66356433	66364442	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG00140_ch_T0001584;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001584;transcript_name=HG00140_ch_T0001584;gene_name=VAMP7;ID=intron:HG00140_ch_T0001584:0;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66364443	66364597	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG00140_ch_T0001584;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001584;transcript_name=HG00140_ch_T0001584;gene_name=VAMP7;ID=exon:HG00140_ch_T0001584:1;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	66364452	66364597	.	+	0	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG00140_ch_T0001584;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001584;transcript_name=HG00140_ch_T0001584;gene_name=VAMP7;ID=CDS:HG00140_ch_T0001584:0;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	66364452	66364454	.	+	0	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG00140_ch_T0001584;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001584;transcript_name=HG00140_ch_T0001584;gene_name=VAMP7;ID=start_codon:HG00140_ch_T0001584;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66364598	66370610	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG00140_ch_T0001584;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001584;transcript_name=HG00140_ch_T0001584;gene_name=VAMP7;ID=intron:HG00140_ch_T0001584:1;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66370611	66370668	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG00140_ch_T0001584;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001584;transcript_name=HG00140_ch_T0001584;gene_name=VAMP7;ID=exon:HG00140_ch_T0001584:2;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	66370611	66370668	.	+	1	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG00140_ch_T0001584;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001584;transcript_name=HG00140_ch_T0001584;gene_name=VAMP7;ID=CDS:HG00140_ch_T0001584:1;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66370669	66373099	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG00140_ch_T0001584;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001584;transcript_name=HG00140_ch_T0001584;gene_name=VAMP7;ID=intron:HG00140_ch_T0001584:2;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66373100	66373237	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG00140_ch_T0001584;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001584;transcript_name=HG00140_ch_T0001584;gene_name=VAMP7;ID=exon:HG00140_ch_T0001584:3;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	66373100	66373237	.	+	0	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG00140_ch_T0001584;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001584;transcript_name=HG00140_ch_T0001584;gene_name=VAMP7;ID=CDS:HG00140_ch_T0001584:2;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66373238	66375486	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG00140_ch_T0001584;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001584;transcript_name=HG00140_ch_T0001584;gene_name=VAMP7;ID=intron:HG00140_ch_T0001584:3;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66375487	66375577	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG00140_ch_T0001584;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001584;transcript_name=HG00140_ch_T0001584;gene_name=VAMP7;ID=exon:HG00140_ch_T0001584:4;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	66375487	66375577	.	+	0	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG00140_ch_T0001584;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001584;transcript_name=HG00140_ch_T0001584;gene_name=VAMP7;ID=CDS:HG00140_ch_T0001584:3;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66375578	66414695	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG00140_ch_T0001584;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001584;transcript_name=HG00140_ch_T0001584;gene_name=VAMP7;ID=intron:HG00140_ch_T0001584:4;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66414696	66414788	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG00140_ch_T0001584;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001584;transcript_name=HG00140_ch_T0001584;gene_name=VAMP7;ID=exon:HG00140_ch_T0001584:5;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	66414696	66414788	.	+	2	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG00140_ch_T0001584;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001584;transcript_name=HG00140_ch_T0001584;gene_name=VAMP7;ID=CDS:HG00140_ch_T0001584:4;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66414789	66416876	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG00140_ch_T0001584;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001584;transcript_name=HG00140_ch_T0001584;gene_name=VAMP7;ID=intron:HG00140_ch_T0001584:5;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66416877	66418763	.	+	.	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG00140_ch_T0001584;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001584;transcript_name=HG00140_ch_T0001584;gene_name=VAMP7;ID=exon:HG00140_ch_T0001584:6;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	66416877	66417133	.	+	2	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG00140_ch_T0001584;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001584;transcript_name=HG00140_ch_T0001584;gene_name=VAMP7;ID=CDS:HG00140_ch_T0001584:5;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	66417131	66417133	.	+	0	source_transcript=ENST00000711264.1;source_transcript_name=VAMP7-211;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711264.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711264.1,ENST00000711264.1;transcript_id=HG00140_ch_T0001584;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001584;transcript_name=HG00140_ch_T0001584;gene_name=VAMP7;ID=stop_codon:HG00140_ch_T0001584;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	66356362	66416983	100	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG00140_ch_T0001585;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_G0000552;transcript_name=HG00140_ch_T0001585;gene_name=VAMP7;ID=HG00140_ch_T0001585;Name=VAMP7
HG00140_chrY	CAT	exon	66356362	66356432	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG00140_ch_T0001585;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001585;transcript_name=HG00140_ch_T0001585;gene_name=VAMP7;ID=exon:HG00140_ch_T0001585:0;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66356433	66364442	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG00140_ch_T0001585;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001585;transcript_name=HG00140_ch_T0001585;gene_name=VAMP7;ID=intron:HG00140_ch_T0001585:0;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66364443	66364532	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG00140_ch_T0001585;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001585;transcript_name=HG00140_ch_T0001585;gene_name=VAMP7;ID=exon:HG00140_ch_T0001585:1;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	66364452	66364532	.	+	0	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG00140_ch_T0001585;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001585;transcript_name=HG00140_ch_T0001585;gene_name=VAMP7;ID=CDS:HG00140_ch_T0001585:0;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	66364452	66364454	.	+	0	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG00140_ch_T0001585;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001585;transcript_name=HG00140_ch_T0001585;gene_name=VAMP7;ID=start_codon:HG00140_ch_T0001585;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66364533	66373099	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG00140_ch_T0001585;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001585;transcript_name=HG00140_ch_T0001585;gene_name=VAMP7;ID=intron:HG00140_ch_T0001585:1;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66373100	66373237	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG00140_ch_T0001585;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001585;transcript_name=HG00140_ch_T0001585;gene_name=VAMP7;ID=exon:HG00140_ch_T0001585:2;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	66373100	66373237	.	+	0	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG00140_ch_T0001585;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001585;transcript_name=HG00140_ch_T0001585;gene_name=VAMP7;ID=CDS:HG00140_ch_T0001585:1;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66373238	66375486	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG00140_ch_T0001585;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001585;transcript_name=HG00140_ch_T0001585;gene_name=VAMP7;ID=intron:HG00140_ch_T0001585:2;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66375487	66375577	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG00140_ch_T0001585;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001585;transcript_name=HG00140_ch_T0001585;gene_name=VAMP7;ID=exon:HG00140_ch_T0001585:3;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	66375487	66375577	.	+	0	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG00140_ch_T0001585;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001585;transcript_name=HG00140_ch_T0001585;gene_name=VAMP7;ID=CDS:HG00140_ch_T0001585:2;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66375578	66394810	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG00140_ch_T0001585;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001585;transcript_name=HG00140_ch_T0001585;gene_name=VAMP7;ID=intron:HG00140_ch_T0001585:3;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66394811	66394878	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG00140_ch_T0001585;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001585;transcript_name=HG00140_ch_T0001585;gene_name=VAMP7;ID=exon:HG00140_ch_T0001585:4;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	66394811	66394878	.	+	2	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG00140_ch_T0001585;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001585;transcript_name=HG00140_ch_T0001585;gene_name=VAMP7;ID=CDS:HG00140_ch_T0001585:3;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66394879	66414695	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG00140_ch_T0001585;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001585;transcript_name=HG00140_ch_T0001585;gene_name=VAMP7;ID=intron:HG00140_ch_T0001585:4;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66414696	66414788	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG00140_ch_T0001585;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001585;transcript_name=HG00140_ch_T0001585;gene_name=VAMP7;ID=exon:HG00140_ch_T0001585:5;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	66414696	66414788	.	+	0	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG00140_ch_T0001585;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001585;transcript_name=HG00140_ch_T0001585;gene_name=VAMP7;ID=CDS:HG00140_ch_T0001585:4;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66414789	66416876	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG00140_ch_T0001585;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001585;transcript_name=HG00140_ch_T0001585;gene_name=VAMP7;ID=intron:HG00140_ch_T0001585:5;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66416877	66416983	.	+	.	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG00140_ch_T0001585;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001585;transcript_name=HG00140_ch_T0001585;gene_name=VAMP7;ID=exon:HG00140_ch_T0001585:6;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	66416877	66416945	.	+	0	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG00140_ch_T0001585;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001585;transcript_name=HG00140_ch_T0001585;gene_name=VAMP7;ID=CDS:HG00140_ch_T0001585:5;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	66416943	66416945	.	+	0	source_transcript=ENST00000711265.1;source_transcript_name=VAMP7-212;source_gene=ENSG00000292366.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292366.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711265.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711265.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=ENST00000711265.1,ENST00000711265.1;transcript_id=HG00140_ch_T0001585;gene_id=HG00140_ch_G0000552;Parent=HG00140_ch_T0001585;transcript_name=HG00140_ch_T0001585;gene_name=VAMP7;ID=stop_codon:HG00140_ch_T0001585;Name=VAMP7;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	66427112	66434319	.	-	.	source_gene_common_name=ENSG00000310555;source_gene=ENSG00000310555.1;alternative_source_transcripts=ENST00000850734.1,ENST00000850734.1;gene_id=HG00140_ch_G0000553;gene_biotype=lncRNA;gene_name=ENSG00000310555;gene_sources=liftoff;ID=HG00140_ch_G0000553;Name=ENSG00000310555
HG00140_chrY	CAT	transcript	66427112	66434319	1000	-	.	source_transcript=ENST00000850734.1;source_transcript_name=ENST00000850734;source_gene=ENSG00000310555.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310555.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850734.1;transcript_score=299.119;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310555;alternative_source_transcripts=ENST00000850734.1,ENST00000850734.1;transcript_id=HG00140_ch_T0001586;gene_id=HG00140_ch_G0000553;Parent=HG00140_ch_G0000553;transcript_name=HG00140_ch_T0001586;gene_name=ENSG00000310555;ID=HG00140_ch_T0001586;Name=ENSG00000310555
HG00140_chrY	CAT	exon	66427112	66427394	.	-	.	source_transcript=ENST00000850734.1;source_transcript_name=ENST00000850734;source_gene=ENSG00000310555.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310555.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850734.1;transcript_score=299.119;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310555;alternative_source_transcripts=ENST00000850734.1,ENST00000850734.1;transcript_id=HG00140_ch_T0001586;gene_id=HG00140_ch_G0000553;Parent=HG00140_ch_T0001586;transcript_name=HG00140_ch_T0001586;gene_name=ENSG00000310555;ID=exon:HG00140_ch_T0001586:0;Name=ENSG00000310555;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66427395	66434148	.	-	.	source_transcript=ENST00000850734.1;source_transcript_name=ENST00000850734;source_gene=ENSG00000310555.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310555.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850734.1;transcript_score=299.119;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310555;alternative_source_transcripts=ENST00000850734.1,ENST00000850734.1;transcript_id=HG00140_ch_T0001586;gene_id=HG00140_ch_G0000553;Parent=HG00140_ch_T0001586;transcript_name=HG00140_ch_T0001586;gene_name=ENSG00000310555;ID=intron:HG00140_ch_T0001586:0;Name=ENSG00000310555;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66434149	66434319	.	-	.	source_transcript=ENST00000850734.1;source_transcript_name=ENST00000850734;source_gene=ENSG00000310555.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310555.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850734.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850734.1;transcript_score=299.119;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310555;alternative_source_transcripts=ENST00000850734.1,ENST00000850734.1;transcript_id=HG00140_ch_T0001586;gene_id=HG00140_ch_G0000553;Parent=HG00140_ch_T0001586;transcript_name=HG00140_ch_T0001586;gene_name=ENSG00000310555;ID=exon:HG00140_ch_T0001586:1;Name=ENSG00000310555;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	66453986	66454319	.	-	.	source_gene_common_name=ELOCP24;source_gene=ENSG00000292367.1;alternative_source_transcripts=ENST00000711266.1,ENST00000711266.1;gene_id=HG00140_ch_G0000554;gene_biotype=processed_pseudogene;gene_name=ELOCP24;gene_sources=liftoff;ID=HG00140_ch_G0000554;Name=ELOCP24
HG00140_chrY	CAT	transcript	66453986	66454319	1000	-	.	source_transcript=ENST00000711266.1;source_transcript_name=ELOCP24-202;source_gene=ENSG00000292367.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292367.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711266.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711266.1;transcript_score=199.701;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP24;alternative_source_transcripts=ENST00000711266.1,ENST00000711266.1;transcript_id=HG00140_ch_T0001587;gene_id=HG00140_ch_G0000554;Parent=HG00140_ch_G0000554;transcript_name=HG00140_ch_T0001587;gene_name=ELOCP24;ID=HG00140_ch_T0001587;Name=ELOCP24
HG00140_chrY	CAT	exon	66453986	66454319	.	-	.	source_transcript=ENST00000711266.1;source_transcript_name=ELOCP24-202;source_gene=ENSG00000292367.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292367.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711266.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711266.1;transcript_score=199.701;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP24;alternative_source_transcripts=ENST00000711266.1,ENST00000711266.1;transcript_id=HG00140_ch_T0001587;gene_id=HG00140_ch_G0000554;Parent=HG00140_ch_T0001587;transcript_name=HG00140_ch_T0001587;gene_name=ELOCP24;ID=exon:HG00140_ch_T0001587:0;Name=ELOCP24;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	66460360	66461238	.	-	.	source_gene_common_name=TRPC6P1;source_gene=ENSG00000292368.1;alternative_source_transcripts=ENST00000711267.1,ENST00000711267.1;gene_id=HG00140_ch_G0000555;gene_biotype=processed_pseudogene;gene_name=TRPC6P1;gene_sources=liftoff;ID=HG00140_ch_G0000555;Name=TRPC6P1
HG00140_chrY	CAT	transcript	66460360	66461238	1000	-	.	source_transcript=ENST00000711267.1;source_transcript_name=TRPC6P1-202;source_gene=ENSG00000292368.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292368.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711267.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711267.1;transcript_score=199.772;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRPC6P1;alternative_source_transcripts=ENST00000711267.1,ENST00000711267.1;transcript_id=HG00140_ch_T0001588;gene_id=HG00140_ch_G0000555;Parent=HG00140_ch_G0000555;transcript_name=HG00140_ch_T0001588;gene_name=TRPC6P1;ID=HG00140_ch_T0001588;Name=TRPC6P1
HG00140_chrY	CAT	exon	66460360	66461238	.	-	.	source_transcript=ENST00000711267.1;source_transcript_name=TRPC6P1-202;source_gene=ENSG00000292368.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000292368.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000711267.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711267.1;transcript_score=199.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRPC6P1;alternative_source_transcripts=ENST00000711267.1,ENST00000711267.1;transcript_id=HG00140_ch_T0001588;gene_id=HG00140_ch_G0000555;Parent=HG00140_ch_T0001588;transcript_name=HG00140_ch_T0001588;gene_name=TRPC6P1;ID=exon:HG00140_ch_T0001588:0;Name=TRPC6P1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	66472688	66487995	.	+	.	source_gene_common_name=IL9R;source_gene=ENSG00000292373.2;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;gene_id=HG00140_ch_G0000556;gene_biotype=protein_coding;gene_name=IL9R;gene_sources=liftoff;ID=HG00140_ch_G0000556;Name=IL9R
HG00140_chrY	CAT	transcript	66472688	66485795	100	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00140_ch_T0001589;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_G0000556;transcript_name=HG00140_ch_T0001589;gene_name=IL9R;ID=HG00140_ch_T0001589;Name=IL9R
HG00140_chrY	CAT	exon	66472688	66472779	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00140_ch_T0001589;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001589;transcript_name=HG00140_ch_T0001589;gene_name=IL9R;ID=exon:HG00140_ch_T0001589:0;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	66472752	66472779	.	+	0	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00140_ch_T0001589;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001589;transcript_name=HG00140_ch_T0001589;gene_name=IL9R;ID=CDS:HG00140_ch_T0001589:0;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	66472752	66472754	.	+	0	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00140_ch_T0001589;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001589;transcript_name=HG00140_ch_T0001589;gene_name=IL9R;ID=start_codon:HG00140_ch_T0001589;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66472780	66477905	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00140_ch_T0001589;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001589;transcript_name=HG00140_ch_T0001589;gene_name=IL9R;ID=intron:HG00140_ch_T0001589:0;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66477906	66478019	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00140_ch_T0001589;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001589;transcript_name=HG00140_ch_T0001589;gene_name=IL9R;ID=exon:HG00140_ch_T0001589:1;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	66477906	66478019	.	+	2	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00140_ch_T0001589;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001589;transcript_name=HG00140_ch_T0001589;gene_name=IL9R;ID=CDS:HG00140_ch_T0001589:1;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66478020	66478448	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00140_ch_T0001589;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001589;transcript_name=HG00140_ch_T0001589;gene_name=IL9R;ID=intron:HG00140_ch_T0001589:1;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66478449	66478560	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00140_ch_T0001589;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001589;transcript_name=HG00140_ch_T0001589;gene_name=IL9R;ID=exon:HG00140_ch_T0001589:2;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	66478449	66478560	.	+	2	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00140_ch_T0001589;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001589;transcript_name=HG00140_ch_T0001589;gene_name=IL9R;ID=CDS:HG00140_ch_T0001589:2;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66478561	66478676	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00140_ch_T0001589;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001589;transcript_name=HG00140_ch_T0001589;gene_name=IL9R;ID=intron:HG00140_ch_T0001589:2;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66478677	66478855	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00140_ch_T0001589;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001589;transcript_name=HG00140_ch_T0001589;gene_name=IL9R;ID=exon:HG00140_ch_T0001589:3;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	66478677	66478855	.	+	1	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00140_ch_T0001589;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001589;transcript_name=HG00140_ch_T0001589;gene_name=IL9R;ID=CDS:HG00140_ch_T0001589:3;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66478856	66479419	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00140_ch_T0001589;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001589;transcript_name=HG00140_ch_T0001589;gene_name=IL9R;ID=intron:HG00140_ch_T0001589:3;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66479420	66479565	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00140_ch_T0001589;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001589;transcript_name=HG00140_ch_T0001589;gene_name=IL9R;ID=exon:HG00140_ch_T0001589:4;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	66479420	66479565	.	+	2	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00140_ch_T0001589;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001589;transcript_name=HG00140_ch_T0001589;gene_name=IL9R;ID=CDS:HG00140_ch_T0001589:4;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66479566	66480277	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00140_ch_T0001589;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001589;transcript_name=HG00140_ch_T0001589;gene_name=IL9R;ID=intron:HG00140_ch_T0001589:4;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66480278	66480479	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00140_ch_T0001589;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001589;transcript_name=HG00140_ch_T0001589;gene_name=IL9R;ID=exon:HG00140_ch_T0001589:5;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	66480278	66480479	.	+	0	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00140_ch_T0001589;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001589;transcript_name=HG00140_ch_T0001589;gene_name=IL9R;ID=CDS:HG00140_ch_T0001589:5;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66480480	66481082	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00140_ch_T0001589;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001589;transcript_name=HG00140_ch_T0001589;gene_name=IL9R;ID=intron:HG00140_ch_T0001589:5;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66481083	66481188	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00140_ch_T0001589;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001589;transcript_name=HG00140_ch_T0001589;gene_name=IL9R;ID=exon:HG00140_ch_T0001589:6;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	66481083	66481188	.	+	2	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00140_ch_T0001589;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001589;transcript_name=HG00140_ch_T0001589;gene_name=IL9R;ID=CDS:HG00140_ch_T0001589:6;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66481189	66482523	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00140_ch_T0001589;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001589;transcript_name=HG00140_ch_T0001589;gene_name=IL9R;ID=intron:HG00140_ch_T0001589:6;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66482524	66482608	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00140_ch_T0001589;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001589;transcript_name=HG00140_ch_T0001589;gene_name=IL9R;ID=exon:HG00140_ch_T0001589:7;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	66482524	66482608	.	+	1	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00140_ch_T0001589;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001589;transcript_name=HG00140_ch_T0001589;gene_name=IL9R;ID=CDS:HG00140_ch_T0001589:7;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66482609	66484790	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00140_ch_T0001589;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001589;transcript_name=HG00140_ch_T0001589;gene_name=IL9R;ID=intron:HG00140_ch_T0001589:7;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66484791	66485795	.	+	.	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00140_ch_T0001589;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001589;transcript_name=HG00140_ch_T0001589;gene_name=IL9R;ID=exon:HG00140_ch_T0001589:8;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	66484791	66485387	.	+	0	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00140_ch_T0001589;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001589;transcript_name=HG00140_ch_T0001589;gene_name=IL9R;ID=CDS:HG00140_ch_T0001589:8;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	66485385	66485387	.	+	0	source_transcript=ENST00000711286.1;source_transcript_name=IL9R-205;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711286.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711286.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711286.1,ENST00000711286.1;transcript_id=HG00140_ch_T0001589;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001589;transcript_name=HG00140_ch_T0001589;gene_name=IL9R;ID=stop_codon:HG00140_ch_T0001589;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	66472698	66487995	100	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00140_ch_T0001590;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_G0000556;transcript_name=HG00140_ch_T0001590;gene_name=IL9R;ID=HG00140_ch_T0001590;Name=IL9R
HG00140_chrY	CAT	exon	66472698	66472779	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00140_ch_T0001590;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001590;transcript_name=HG00140_ch_T0001590;gene_name=IL9R;ID=exon:HG00140_ch_T0001590:0;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	66472736	66472779	.	+	0	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00140_ch_T0001590;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001590;transcript_name=HG00140_ch_T0001590;gene_name=IL9R;ID=CDS:HG00140_ch_T0001590:0;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	66472736	66472738	.	+	0	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00140_ch_T0001590;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001590;transcript_name=HG00140_ch_T0001590;gene_name=IL9R;ID=start_codon:HG00140_ch_T0001590;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66472780	66476404	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00140_ch_T0001590;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001590;transcript_name=HG00140_ch_T0001590;gene_name=IL9R;ID=intron:HG00140_ch_T0001590:0;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66476405	66476505	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00140_ch_T0001590;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001590;transcript_name=HG00140_ch_T0001590;gene_name=IL9R;ID=exon:HG00140_ch_T0001590:1;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	66476405	66476505	.	+	1	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00140_ch_T0001590;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001590;transcript_name=HG00140_ch_T0001590;gene_name=IL9R;ID=CDS:HG00140_ch_T0001590:1;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66476506	66477881	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00140_ch_T0001590;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001590;transcript_name=HG00140_ch_T0001590;gene_name=IL9R;ID=intron:HG00140_ch_T0001590:1;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66477882	66478019	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00140_ch_T0001590;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001590;transcript_name=HG00140_ch_T0001590;gene_name=IL9R;ID=exon:HG00140_ch_T0001590:2;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	66477882	66478019	.	+	2	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00140_ch_T0001590;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001590;transcript_name=HG00140_ch_T0001590;gene_name=IL9R;ID=CDS:HG00140_ch_T0001590:2;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66478020	66478448	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00140_ch_T0001590;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001590;transcript_name=HG00140_ch_T0001590;gene_name=IL9R;ID=intron:HG00140_ch_T0001590:2;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66478449	66478560	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00140_ch_T0001590;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001590;transcript_name=HG00140_ch_T0001590;gene_name=IL9R;ID=exon:HG00140_ch_T0001590:3;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	66478449	66478560	.	+	2	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00140_ch_T0001590;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001590;transcript_name=HG00140_ch_T0001590;gene_name=IL9R;ID=CDS:HG00140_ch_T0001590:3;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66478561	66478683	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00140_ch_T0001590;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001590;transcript_name=HG00140_ch_T0001590;gene_name=IL9R;ID=intron:HG00140_ch_T0001590:3;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66478684	66478855	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00140_ch_T0001590;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001590;transcript_name=HG00140_ch_T0001590;gene_name=IL9R;ID=exon:HG00140_ch_T0001590:4;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	66478684	66478855	.	+	1	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00140_ch_T0001590;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001590;transcript_name=HG00140_ch_T0001590;gene_name=IL9R;ID=CDS:HG00140_ch_T0001590:4;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66478856	66479448	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00140_ch_T0001590;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001590;transcript_name=HG00140_ch_T0001590;gene_name=IL9R;ID=intron:HG00140_ch_T0001590:4;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66479449	66479565	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00140_ch_T0001590;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001590;transcript_name=HG00140_ch_T0001590;gene_name=IL9R;ID=exon:HG00140_ch_T0001590:5;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	66479449	66479565	.	+	0	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00140_ch_T0001590;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001590;transcript_name=HG00140_ch_T0001590;gene_name=IL9R;ID=CDS:HG00140_ch_T0001590:5;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66479566	66480277	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00140_ch_T0001590;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001590;transcript_name=HG00140_ch_T0001590;gene_name=IL9R;ID=intron:HG00140_ch_T0001590:5;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66480278	66480479	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00140_ch_T0001590;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001590;transcript_name=HG00140_ch_T0001590;gene_name=IL9R;ID=exon:HG00140_ch_T0001590:6;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	66480278	66480479	.	+	0	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00140_ch_T0001590;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001590;transcript_name=HG00140_ch_T0001590;gene_name=IL9R;ID=CDS:HG00140_ch_T0001590:6;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66480480	66481082	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00140_ch_T0001590;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001590;transcript_name=HG00140_ch_T0001590;gene_name=IL9R;ID=intron:HG00140_ch_T0001590:6;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66481083	66481188	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00140_ch_T0001590;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001590;transcript_name=HG00140_ch_T0001590;gene_name=IL9R;ID=exon:HG00140_ch_T0001590:7;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	66481083	66481188	.	+	2	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00140_ch_T0001590;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001590;transcript_name=HG00140_ch_T0001590;gene_name=IL9R;ID=CDS:HG00140_ch_T0001590:7;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66481189	66484790	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00140_ch_T0001590;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001590;transcript_name=HG00140_ch_T0001590;gene_name=IL9R;ID=intron:HG00140_ch_T0001590:7;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66484791	66487995	.	+	.	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00140_ch_T0001590;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001590;transcript_name=HG00140_ch_T0001590;gene_name=IL9R;ID=exon:HG00140_ch_T0001590:8;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	66484791	66484827	.	+	1	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00140_ch_T0001590;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001590;transcript_name=HG00140_ch_T0001590;gene_name=IL9R;ID=CDS:HG00140_ch_T0001590:8;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	66484825	66484827	.	+	0	source_transcript=ENST00000850823.1;source_transcript_name=IL9R-208;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000850823.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850823.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000850823.1,ENST00000850823.1;transcript_id=HG00140_ch_T0001590;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001590;transcript_name=HG00140_ch_T0001590;gene_name=IL9R;ID=stop_codon:HG00140_ch_T0001590;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	66472726	66477970	1000	+	.	source_transcript=ENST00000711288.1;source_transcript_name=IL9R-206;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711288.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711288.1,ENST00000711288.1;transcript_id=HG00140_ch_T0001591;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_G0000556;transcript_name=HG00140_ch_T0001591;gene_name=IL9R;ID=HG00140_ch_T0001591;Name=IL9R
HG00140_chrY	CAT	exon	66472726	66472779	.	+	.	source_transcript=ENST00000711288.1;source_transcript_name=IL9R-206;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711288.1,ENST00000711288.1;transcript_id=HG00140_ch_T0001591;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001591;transcript_name=HG00140_ch_T0001591;gene_name=IL9R;ID=exon:HG00140_ch_T0001591:0;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66472780	66476326	.	+	.	source_transcript=ENST00000711288.1;source_transcript_name=IL9R-206;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711288.1,ENST00000711288.1;transcript_id=HG00140_ch_T0001591;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001591;transcript_name=HG00140_ch_T0001591;gene_name=IL9R;ID=intron:HG00140_ch_T0001591:0;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66476327	66476505	.	+	.	source_transcript=ENST00000711288.1;source_transcript_name=IL9R-206;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711288.1,ENST00000711288.1;transcript_id=HG00140_ch_T0001591;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001591;transcript_name=HG00140_ch_T0001591;gene_name=IL9R;ID=exon:HG00140_ch_T0001591:1;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66476506	66477905	.	+	.	source_transcript=ENST00000711288.1;source_transcript_name=IL9R-206;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711288.1,ENST00000711288.1;transcript_id=HG00140_ch_T0001591;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001591;transcript_name=HG00140_ch_T0001591;gene_name=IL9R;ID=intron:HG00140_ch_T0001591:1;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66477906	66477970	.	+	.	source_transcript=ENST00000711288.1;source_transcript_name=IL9R-206;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711288.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711288.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711288.1,ENST00000711288.1;transcript_id=HG00140_ch_T0001591;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001591;transcript_name=HG00140_ch_T0001591;gene_name=IL9R;ID=exon:HG00140_ch_T0001591:2;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	66481114	66483046	1000	+	.	source_transcript=ENST00000711289.1;source_transcript_name=IL9R-207;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711289.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711289.1,ENST00000711289.1;transcript_id=HG00140_ch_T0001593;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_G0000556;transcript_name=HG00140_ch_T0001593;gene_name=IL9R;ID=HG00140_ch_T0001593;Name=IL9R
HG00140_chrY	CAT	exon	66481114	66481188	.	+	.	source_transcript=ENST00000711289.1;source_transcript_name=IL9R-207;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711289.1,ENST00000711289.1;transcript_id=HG00140_ch_T0001593;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001593;transcript_name=HG00140_ch_T0001593;gene_name=IL9R;ID=exon:HG00140_ch_T0001593:0;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66481189	66482523	.	+	.	source_transcript=ENST00000711289.1;source_transcript_name=IL9R-207;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711289.1,ENST00000711289.1;transcript_id=HG00140_ch_T0001593;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001593;transcript_name=HG00140_ch_T0001593;gene_name=IL9R;ID=intron:HG00140_ch_T0001593:0;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66482524	66482608	.	+	.	source_transcript=ENST00000711289.1;source_transcript_name=IL9R-207;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711289.1,ENST00000711289.1;transcript_id=HG00140_ch_T0001593;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001593;transcript_name=HG00140_ch_T0001593;gene_name=IL9R;ID=exon:HG00140_ch_T0001593:1;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66482609	66482898	.	+	.	source_transcript=ENST00000711289.1;source_transcript_name=IL9R-207;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711289.1,ENST00000711289.1;transcript_id=HG00140_ch_T0001593;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001593;transcript_name=HG00140_ch_T0001593;gene_name=IL9R;ID=intron:HG00140_ch_T0001593:1;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66482899	66483046	.	+	.	source_transcript=ENST00000711289.1;source_transcript_name=IL9R-207;source_gene=ENSG00000292373.2;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292373.2;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711289.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711289.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;alternative_source_transcripts=ENST00000711289.1,ENST00000711289.1;transcript_id=HG00140_ch_T0001593;gene_id=HG00140_ch_G0000556;Parent=HG00140_ch_T0001593;transcript_name=HG00140_ch_T0001593;gene_name=IL9R;ID=exon:HG00140_ch_T0001593:2;Name=IL9R;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	66479218	66497227	.	+	.	source_gene_common_name=ENSG00000292369;source_gene=ENSG00000292369.1;alternative_source_transcripts=ENST00000711268.1,ENST00000711268.1;gene_id=HG00140_ch_G0000557;gene_biotype=lncRNA;gene_name=ENSG00000292369;gene_sources=liftoff;ID=HG00140_ch_G0000557;Name=ENSG00000292369
HG00140_chrY	CAT	transcript	66479218	66497227	1000	+	.	source_transcript=ENST00000711268.1;source_transcript_name=ENST00000711268;source_gene=ENSG00000292369.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292369.1;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711268.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711268.1;transcript_score=299.871;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292369;alternative_source_transcripts=ENST00000711268.1,ENST00000711268.1;transcript_id=HG00140_ch_T0001592;gene_id=HG00140_ch_G0000557;Parent=HG00140_ch_G0000557;transcript_name=HG00140_ch_T0001592;gene_name=ENSG00000292369;ID=HG00140_ch_T0001592;Name=ENSG00000292369
HG00140_chrY	CAT	exon	66479218	66479565	.	+	.	source_transcript=ENST00000711268.1;source_transcript_name=ENST00000711268;source_gene=ENSG00000292369.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292369.1;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711268.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711268.1;transcript_score=299.871;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292369;alternative_source_transcripts=ENST00000711268.1,ENST00000711268.1;transcript_id=HG00140_ch_T0001592;gene_id=HG00140_ch_G0000557;Parent=HG00140_ch_T0001592;transcript_name=HG00140_ch_T0001592;gene_name=ENSG00000292369;ID=exon:HG00140_ch_T0001592:0;Name=ENSG00000292369;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66479566	66482523	.	+	.	source_transcript=ENST00000711268.1;source_transcript_name=ENST00000711268;source_gene=ENSG00000292369.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292369.1;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711268.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711268.1;transcript_score=299.871;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292369;alternative_source_transcripts=ENST00000711268.1,ENST00000711268.1;transcript_id=HG00140_ch_T0001592;gene_id=HG00140_ch_G0000557;Parent=HG00140_ch_T0001592;transcript_name=HG00140_ch_T0001592;gene_name=ENSG00000292369;ID=intron:HG00140_ch_T0001592:0;Name=ENSG00000292369;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66482524	66482608	.	+	.	source_transcript=ENST00000711268.1;source_transcript_name=ENST00000711268;source_gene=ENSG00000292369.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292369.1;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711268.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711268.1;transcript_score=299.871;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292369;alternative_source_transcripts=ENST00000711268.1,ENST00000711268.1;transcript_id=HG00140_ch_T0001592;gene_id=HG00140_ch_G0000557;Parent=HG00140_ch_T0001592;transcript_name=HG00140_ch_T0001592;gene_name=ENSG00000292369;ID=exon:HG00140_ch_T0001592:1;Name=ENSG00000292369;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66482609	66496681	.	+	.	source_transcript=ENST00000711268.1;source_transcript_name=ENST00000711268;source_gene=ENSG00000292369.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292369.1;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711268.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711268.1;transcript_score=299.871;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292369;alternative_source_transcripts=ENST00000711268.1,ENST00000711268.1;transcript_id=HG00140_ch_T0001592;gene_id=HG00140_ch_G0000557;Parent=HG00140_ch_T0001592;transcript_name=HG00140_ch_T0001592;gene_name=ENSG00000292369;ID=intron:HG00140_ch_T0001592:1;Name=ENSG00000292369;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66496682	66496783	.	+	.	source_transcript=ENST00000711268.1;source_transcript_name=ENST00000711268;source_gene=ENSG00000292369.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292369.1;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711268.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711268.1;transcript_score=299.871;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292369;alternative_source_transcripts=ENST00000711268.1,ENST00000711268.1;transcript_id=HG00140_ch_T0001592;gene_id=HG00140_ch_G0000557;Parent=HG00140_ch_T0001592;transcript_name=HG00140_ch_T0001592;gene_name=ENSG00000292369;ID=exon:HG00140_ch_T0001592:2;Name=ENSG00000292369;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66496784	66496989	.	+	.	source_transcript=ENST00000711268.1;source_transcript_name=ENST00000711268;source_gene=ENSG00000292369.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292369.1;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711268.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711268.1;transcript_score=299.871;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292369;alternative_source_transcripts=ENST00000711268.1,ENST00000711268.1;transcript_id=HG00140_ch_T0001592;gene_id=HG00140_ch_G0000557;Parent=HG00140_ch_T0001592;transcript_name=HG00140_ch_T0001592;gene_name=ENSG00000292369;ID=intron:HG00140_ch_T0001592:2;Name=ENSG00000292369;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66496990	66497227	.	+	.	source_transcript=ENST00000711268.1;source_transcript_name=ENST00000711268;source_gene=ENSG00000292369.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292369.1;gene_biotype=lncRNA;transcript_biotype=retained_intron;alignment_id=ENST00000711268.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711268.1;transcript_score=299.871;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000292369;alternative_source_transcripts=ENST00000711268.1,ENST00000711268.1;transcript_id=HG00140_ch_T0001592;gene_id=HG00140_ch_G0000557;Parent=HG00140_ch_T0001592;transcript_name=HG00140_ch_T0001592;gene_name=ENSG00000292369;ID=exon:HG00140_ch_T0001592:3;Name=ENSG00000292369;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	66489585	66491860	.	-	.	source_gene_common_name=WASIR1;source_gene=ENSG00000292370.2;alternative_source_transcripts=ENST00000850720.1,ENST00000850720.1;gene_id=HG00140_ch_G0000558;gene_biotype=lncRNA;gene_name=WASIR1;gene_sources=liftoff;ID=HG00140_ch_G0000558;Name=WASIR1
HG00140_chrY	CAT	transcript	66489585	66491853	1000	-	.	source_transcript=ENST00000850720.1;source_transcript_name=WASIR1-203;source_gene=ENSG00000292370.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292370.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850720.1;transcript_score=299.511;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASIR1;alternative_source_transcripts=ENST00000850720.1,ENST00000850720.1;transcript_id=HG00140_ch_T0001594;gene_id=HG00140_ch_G0000558;Parent=HG00140_ch_G0000558;transcript_name=HG00140_ch_T0001594;gene_name=WASIR1;ID=HG00140_ch_T0001594;Name=WASIR1
HG00140_chrY	CAT	exon	66489585	66490595	.	-	.	source_transcript=ENST00000850720.1;source_transcript_name=WASIR1-203;source_gene=ENSG00000292370.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292370.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850720.1;transcript_score=299.511;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASIR1;alternative_source_transcripts=ENST00000850720.1,ENST00000850720.1;transcript_id=HG00140_ch_T0001594;gene_id=HG00140_ch_G0000558;Parent=HG00140_ch_T0001594;transcript_name=HG00140_ch_T0001594;gene_name=WASIR1;ID=exon:HG00140_ch_T0001594:0;Name=WASIR1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66490596	66491636	.	-	.	source_transcript=ENST00000850720.1;source_transcript_name=WASIR1-203;source_gene=ENSG00000292370.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292370.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850720.1;transcript_score=299.511;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASIR1;alternative_source_transcripts=ENST00000850720.1,ENST00000850720.1;transcript_id=HG00140_ch_T0001594;gene_id=HG00140_ch_G0000558;Parent=HG00140_ch_T0001594;transcript_name=HG00140_ch_T0001594;gene_name=WASIR1;ID=intron:HG00140_ch_T0001594:0;Name=WASIR1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66491637	66491853	.	-	.	source_transcript=ENST00000850720.1;source_transcript_name=WASIR1-203;source_gene=ENSG00000292370.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292370.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850720.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850720.1;transcript_score=299.511;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASIR1;alternative_source_transcripts=ENST00000850720.1,ENST00000850720.1;transcript_id=HG00140_ch_T0001594;gene_id=HG00140_ch_G0000558;Parent=HG00140_ch_T0001594;transcript_name=HG00140_ch_T0001594;gene_name=WASIR1;ID=exon:HG00140_ch_T0001594:1;Name=WASIR1;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	66489585	66491860	1000	-	.	source_transcript=ENST00000850824.1;source_transcript_name=WASIR1-204;source_gene=ENSG00000292370.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292370.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850824.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850824.1;transcript_score=299.459;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASIR1;alternative_source_transcripts=ENST00000850824.1,ENST00000850824.1;transcript_id=HG00140_ch_T0001595;gene_id=HG00140_ch_G0000558;Parent=HG00140_ch_G0000558;transcript_name=HG00140_ch_T0001595;gene_name=WASIR1;ID=HG00140_ch_T0001595;Name=WASIR1
HG00140_chrY	CAT	exon	66489585	66490470	.	-	.	source_transcript=ENST00000850824.1;source_transcript_name=WASIR1-204;source_gene=ENSG00000292370.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292370.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850824.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850824.1;transcript_score=299.459;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASIR1;alternative_source_transcripts=ENST00000850824.1,ENST00000850824.1;transcript_id=HG00140_ch_T0001595;gene_id=HG00140_ch_G0000558;Parent=HG00140_ch_T0001595;transcript_name=HG00140_ch_T0001595;gene_name=WASIR1;ID=exon:HG00140_ch_T0001595:0;Name=WASIR1;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66490471	66491636	.	-	.	source_transcript=ENST00000850824.1;source_transcript_name=WASIR1-204;source_gene=ENSG00000292370.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292370.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850824.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850824.1;transcript_score=299.459;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASIR1;alternative_source_transcripts=ENST00000850824.1,ENST00000850824.1;transcript_id=HG00140_ch_T0001595;gene_id=HG00140_ch_G0000558;Parent=HG00140_ch_T0001595;transcript_name=HG00140_ch_T0001595;gene_name=WASIR1;ID=intron:HG00140_ch_T0001595:0;Name=WASIR1;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66491637	66491860	.	-	.	source_transcript=ENST00000850824.1;source_transcript_name=WASIR1-204;source_gene=ENSG00000292370.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000292370.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850824.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850824.1;transcript_score=299.459;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASIR1;alternative_source_transcripts=ENST00000850824.1,ENST00000850824.1;transcript_id=HG00140_ch_T0001595;gene_id=HG00140_ch_G0000558;Parent=HG00140_ch_T0001595;transcript_name=HG00140_ch_T0001595;gene_name=WASIR1;ID=exon:HG00140_ch_T0001595:1;Name=WASIR1;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	66495816	66500698	.	+	.	source_gene_common_name=WASH6P;source_gene=ENSG00000292372.1;alternative_source_transcripts=ENST00000711271.1,ENST00000711271.1;gene_id=HG00140_ch_G0000559;gene_biotype=protein_coding;gene_name=WASH6P;gene_sources=liftoff;ID=HG00140_ch_G0000559;Name=WASH6P
HG00140_chrY	CAT	transcript	66495816	66497406	1000	+	.	source_transcript=ENST00000711271.1;source_transcript_name=WASH6P-216;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711271.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711271.1;transcript_score=299.722;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711271.1,ENST00000711271.1;transcript_id=HG00140_ch_T0001596;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_G0000559;transcript_name=HG00140_ch_T0001596;gene_name=WASH6P;ID=HG00140_ch_T0001596;Name=WASH6P
HG00140_chrY	CAT	exon	66495816	66496138	.	+	.	source_transcript=ENST00000711271.1;source_transcript_name=WASH6P-216;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711271.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711271.1;transcript_score=299.722;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711271.1,ENST00000711271.1;transcript_id=HG00140_ch_T0001596;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001596;transcript_name=HG00140_ch_T0001596;gene_name=WASH6P;ID=exon:HG00140_ch_T0001596:0;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66496139	66496496	.	+	.	source_transcript=ENST00000711271.1;source_transcript_name=WASH6P-216;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711271.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711271.1;transcript_score=299.722;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711271.1,ENST00000711271.1;transcript_id=HG00140_ch_T0001596;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001596;transcript_name=HG00140_ch_T0001596;gene_name=WASH6P;ID=intron:HG00140_ch_T0001596:0;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66496497	66496554	.	+	.	source_transcript=ENST00000711271.1;source_transcript_name=WASH6P-216;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711271.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711271.1;transcript_score=299.722;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711271.1,ENST00000711271.1;transcript_id=HG00140_ch_T0001596;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001596;transcript_name=HG00140_ch_T0001596;gene_name=WASH6P;ID=exon:HG00140_ch_T0001596:1;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66496555	66496684	.	+	.	source_transcript=ENST00000711271.1;source_transcript_name=WASH6P-216;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711271.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711271.1;transcript_score=299.722;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711271.1,ENST00000711271.1;transcript_id=HG00140_ch_T0001596;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001596;transcript_name=HG00140_ch_T0001596;gene_name=WASH6P;ID=intron:HG00140_ch_T0001596:1;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66496685	66496783	.	+	.	source_transcript=ENST00000711271.1;source_transcript_name=WASH6P-216;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711271.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711271.1;transcript_score=299.722;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711271.1,ENST00000711271.1;transcript_id=HG00140_ch_T0001596;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001596;transcript_name=HG00140_ch_T0001596;gene_name=WASH6P;ID=exon:HG00140_ch_T0001596:2;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66496784	66496989	.	+	.	source_transcript=ENST00000711271.1;source_transcript_name=WASH6P-216;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711271.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711271.1;transcript_score=299.722;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711271.1,ENST00000711271.1;transcript_id=HG00140_ch_T0001596;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001596;transcript_name=HG00140_ch_T0001596;gene_name=WASH6P;ID=intron:HG00140_ch_T0001596:2;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66496990	66497136	.	+	.	source_transcript=ENST00000711271.1;source_transcript_name=WASH6P-216;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711271.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711271.1;transcript_score=299.722;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711271.1,ENST00000711271.1;transcript_id=HG00140_ch_T0001596;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001596;transcript_name=HG00140_ch_T0001596;gene_name=WASH6P;ID=exon:HG00140_ch_T0001596:3;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66497137	66497313	.	+	.	source_transcript=ENST00000711271.1;source_transcript_name=WASH6P-216;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711271.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711271.1;transcript_score=299.722;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711271.1,ENST00000711271.1;transcript_id=HG00140_ch_T0001596;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001596;transcript_name=HG00140_ch_T0001596;gene_name=WASH6P;ID=intron:HG00140_ch_T0001596:3;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66497314	66497406	.	+	.	source_transcript=ENST00000711271.1;source_transcript_name=WASH6P-216;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711271.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711271.1;transcript_score=299.722;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711271.1,ENST00000711271.1;transcript_id=HG00140_ch_T0001596;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001596;transcript_name=HG00140_ch_T0001596;gene_name=WASH6P;ID=exon:HG00140_ch_T0001596:4;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	66495951	66500362	100	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711272.1,ENST00000711272.1;transcript_id=HG00140_ch_T0001597;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_G0000559;transcript_name=HG00140_ch_T0001597;gene_name=WASH6P;ID=HG00140_ch_T0001597;Name=WASH6P
HG00140_chrY	CAT	exon	66495951	66496138	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711272.1,ENST00000711272.1;transcript_id=HG00140_ch_T0001597;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001597;transcript_name=HG00140_ch_T0001597;gene_name=WASH6P;ID=exon:HG00140_ch_T0001597:0;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	66495951	66496138	.	+	0	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711272.1,ENST00000711272.1;transcript_id=HG00140_ch_T0001597;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001597;transcript_name=HG00140_ch_T0001597;gene_name=WASH6P;ID=CDS:HG00140_ch_T0001597:0;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	start_codon	66495951	66495953	.	+	0	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711272.1,ENST00000711272.1;transcript_id=HG00140_ch_T0001597;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001597;transcript_name=HG00140_ch_T0001597;gene_name=WASH6P;ID=start_codon:HG00140_ch_T0001597;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66496139	66496671	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711272.1,ENST00000711272.1;transcript_id=HG00140_ch_T0001597;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001597;transcript_name=HG00140_ch_T0001597;gene_name=WASH6P;ID=intron:HG00140_ch_T0001597:0;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66496672	66496783	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711272.1,ENST00000711272.1;transcript_id=HG00140_ch_T0001597;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001597;transcript_name=HG00140_ch_T0001597;gene_name=WASH6P;ID=exon:HG00140_ch_T0001597:1;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	66496672	66496783	.	+	1	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711272.1,ENST00000711272.1;transcript_id=HG00140_ch_T0001597;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001597;transcript_name=HG00140_ch_T0001597;gene_name=WASH6P;ID=CDS:HG00140_ch_T0001597:1;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66496784	66496989	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711272.1,ENST00000711272.1;transcript_id=HG00140_ch_T0001597;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001597;transcript_name=HG00140_ch_T0001597;gene_name=WASH6P;ID=intron:HG00140_ch_T0001597:1;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66496990	66497136	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711272.1,ENST00000711272.1;transcript_id=HG00140_ch_T0001597;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001597;transcript_name=HG00140_ch_T0001597;gene_name=WASH6P;ID=exon:HG00140_ch_T0001597:2;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	66496990	66497136	.	+	0	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711272.1,ENST00000711272.1;transcript_id=HG00140_ch_T0001597;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001597;transcript_name=HG00140_ch_T0001597;gene_name=WASH6P;ID=CDS:HG00140_ch_T0001597:2;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66497137	66497313	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711272.1,ENST00000711272.1;transcript_id=HG00140_ch_T0001597;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001597;transcript_name=HG00140_ch_T0001597;gene_name=WASH6P;ID=intron:HG00140_ch_T0001597:2;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66497314	66497450	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711272.1,ENST00000711272.1;transcript_id=HG00140_ch_T0001597;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001597;transcript_name=HG00140_ch_T0001597;gene_name=WASH6P;ID=exon:HG00140_ch_T0001597:3;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	66497314	66497450	.	+	0	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711272.1,ENST00000711272.1;transcript_id=HG00140_ch_T0001597;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001597;transcript_name=HG00140_ch_T0001597;gene_name=WASH6P;ID=CDS:HG00140_ch_T0001597:3;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66497451	66497689	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711272.1,ENST00000711272.1;transcript_id=HG00140_ch_T0001597;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001597;transcript_name=HG00140_ch_T0001597;gene_name=WASH6P;ID=intron:HG00140_ch_T0001597:3;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66497690	66497825	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711272.1,ENST00000711272.1;transcript_id=HG00140_ch_T0001597;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001597;transcript_name=HG00140_ch_T0001597;gene_name=WASH6P;ID=exon:HG00140_ch_T0001597:4;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	66497690	66497825	.	+	1	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711272.1,ENST00000711272.1;transcript_id=HG00140_ch_T0001597;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001597;transcript_name=HG00140_ch_T0001597;gene_name=WASH6P;ID=CDS:HG00140_ch_T0001597:4;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66497826	66498002	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711272.1,ENST00000711272.1;transcript_id=HG00140_ch_T0001597;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001597;transcript_name=HG00140_ch_T0001597;gene_name=WASH6P;ID=intron:HG00140_ch_T0001597:4;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66498003	66498204	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711272.1,ENST00000711272.1;transcript_id=HG00140_ch_T0001597;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001597;transcript_name=HG00140_ch_T0001597;gene_name=WASH6P;ID=exon:HG00140_ch_T0001597:5;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	66498003	66498204	.	+	0	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711272.1,ENST00000711272.1;transcript_id=HG00140_ch_T0001597;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001597;transcript_name=HG00140_ch_T0001597;gene_name=WASH6P;ID=CDS:HG00140_ch_T0001597:5;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66498205	66498292	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711272.1,ENST00000711272.1;transcript_id=HG00140_ch_T0001597;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001597;transcript_name=HG00140_ch_T0001597;gene_name=WASH6P;ID=intron:HG00140_ch_T0001597:5;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66498293	66498451	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711272.1,ENST00000711272.1;transcript_id=HG00140_ch_T0001597;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001597;transcript_name=HG00140_ch_T0001597;gene_name=WASH6P;ID=exon:HG00140_ch_T0001597:6;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	66498293	66498451	.	+	2	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711272.1,ENST00000711272.1;transcript_id=HG00140_ch_T0001597;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001597;transcript_name=HG00140_ch_T0001597;gene_name=WASH6P;ID=CDS:HG00140_ch_T0001597:6;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66498452	66499107	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711272.1,ENST00000711272.1;transcript_id=HG00140_ch_T0001597;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001597;transcript_name=HG00140_ch_T0001597;gene_name=WASH6P;ID=intron:HG00140_ch_T0001597:6;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66499108	66499260	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711272.1,ENST00000711272.1;transcript_id=HG00140_ch_T0001597;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001597;transcript_name=HG00140_ch_T0001597;gene_name=WASH6P;ID=exon:HG00140_ch_T0001597:7;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	66499108	66499260	.	+	2	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711272.1,ENST00000711272.1;transcript_id=HG00140_ch_T0001597;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001597;transcript_name=HG00140_ch_T0001597;gene_name=WASH6P;ID=CDS:HG00140_ch_T0001597:7;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66499261	66500019	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711272.1,ENST00000711272.1;transcript_id=HG00140_ch_T0001597;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001597;transcript_name=HG00140_ch_T0001597;gene_name=WASH6P;ID=intron:HG00140_ch_T0001597:7;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66500020	66500088	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711272.1,ENST00000711272.1;transcript_id=HG00140_ch_T0001597;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001597;transcript_name=HG00140_ch_T0001597;gene_name=WASH6P;ID=exon:HG00140_ch_T0001597:8;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	66500020	66500088	.	+	2	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711272.1,ENST00000711272.1;transcript_id=HG00140_ch_T0001597;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001597;transcript_name=HG00140_ch_T0001597;gene_name=WASH6P;ID=CDS:HG00140_ch_T0001597:8;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66500089	66500228	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711272.1,ENST00000711272.1;transcript_id=HG00140_ch_T0001597;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001597;transcript_name=HG00140_ch_T0001597;gene_name=WASH6P;ID=intron:HG00140_ch_T0001597:8;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66500229	66500362	.	+	.	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711272.1,ENST00000711272.1;transcript_id=HG00140_ch_T0001597;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001597;transcript_name=HG00140_ch_T0001597;gene_name=WASH6P;ID=exon:HG00140_ch_T0001597:9;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	CDS	66500229	66500362	.	+	2	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711272.1,ENST00000711272.1;transcript_id=HG00140_ch_T0001597;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001597;transcript_name=HG00140_ch_T0001597;gene_name=WASH6P;ID=CDS:HG00140_ch_T0001597:9;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	stop_codon	66500360	66500362	.	+	0	source_transcript=ENST00000711272.1;source_transcript_name=WASH6P-217;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000711272.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711272.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711272.1,ENST00000711272.1;transcript_id=HG00140_ch_T0001597;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001597;transcript_name=HG00140_ch_T0001597;gene_name=WASH6P;ID=stop_codon:HG00140_ch_T0001597;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	66496318	66500651	1000	+	.	source_transcript=ENST00000711273.1;source_transcript_name=WASH6P-218;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711273.1;transcript_score=299.45799999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711273.1,ENST00000711273.1;transcript_id=HG00140_ch_T0001598;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_G0000559;transcript_name=HG00140_ch_T0001598;gene_name=WASH6P;ID=HG00140_ch_T0001598;Name=WASH6P
HG00140_chrY	CAT	exon	66496318	66498200	.	+	.	source_transcript=ENST00000711273.1;source_transcript_name=WASH6P-218;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711273.1;transcript_score=299.45799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711273.1,ENST00000711273.1;transcript_id=HG00140_ch_T0001598;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001598;transcript_name=HG00140_ch_T0001598;gene_name=WASH6P;ID=exon:HG00140_ch_T0001598:0;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66498201	66498292	.	+	.	source_transcript=ENST00000711273.1;source_transcript_name=WASH6P-218;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711273.1;transcript_score=299.45799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711273.1,ENST00000711273.1;transcript_id=HG00140_ch_T0001598;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001598;transcript_name=HG00140_ch_T0001598;gene_name=WASH6P;ID=intron:HG00140_ch_T0001598:0;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66498293	66500651	.	+	.	source_transcript=ENST00000711273.1;source_transcript_name=WASH6P-218;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711273.1;transcript_score=299.45799999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711273.1,ENST00000711273.1;transcript_id=HG00140_ch_T0001598;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001598;transcript_name=HG00140_ch_T0001598;gene_name=WASH6P;ID=exon:HG00140_ch_T0001598:1;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	66496436	66498198	1000	+	.	source_transcript=ENST00000711274.1;source_transcript_name=WASH6P-219;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711274.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711274.1;transcript_score=299.63800000000003;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711274.1,ENST00000711274.1;transcript_id=HG00140_ch_T0001599;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_G0000559;transcript_name=HG00140_ch_T0001599;gene_name=WASH6P;ID=HG00140_ch_T0001599;Name=WASH6P
HG00140_chrY	CAT	exon	66496436	66496783	.	+	.	source_transcript=ENST00000711274.1;source_transcript_name=WASH6P-219;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711274.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711274.1;transcript_score=299.63800000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711274.1,ENST00000711274.1;transcript_id=HG00140_ch_T0001599;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001599;transcript_name=HG00140_ch_T0001599;gene_name=WASH6P;ID=exon:HG00140_ch_T0001599:0;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66496784	66496989	.	+	.	source_transcript=ENST00000711274.1;source_transcript_name=WASH6P-219;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711274.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711274.1;transcript_score=299.63800000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711274.1,ENST00000711274.1;transcript_id=HG00140_ch_T0001599;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001599;transcript_name=HG00140_ch_T0001599;gene_name=WASH6P;ID=intron:HG00140_ch_T0001599:0;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66496990	66497136	.	+	.	source_transcript=ENST00000711274.1;source_transcript_name=WASH6P-219;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711274.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711274.1;transcript_score=299.63800000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711274.1,ENST00000711274.1;transcript_id=HG00140_ch_T0001599;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001599;transcript_name=HG00140_ch_T0001599;gene_name=WASH6P;ID=exon:HG00140_ch_T0001599:1;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66497137	66497313	.	+	.	source_transcript=ENST00000711274.1;source_transcript_name=WASH6P-219;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711274.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711274.1;transcript_score=299.63800000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711274.1,ENST00000711274.1;transcript_id=HG00140_ch_T0001599;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001599;transcript_name=HG00140_ch_T0001599;gene_name=WASH6P;ID=intron:HG00140_ch_T0001599:1;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66497314	66497450	.	+	.	source_transcript=ENST00000711274.1;source_transcript_name=WASH6P-219;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711274.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711274.1;transcript_score=299.63800000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711274.1,ENST00000711274.1;transcript_id=HG00140_ch_T0001599;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001599;transcript_name=HG00140_ch_T0001599;gene_name=WASH6P;ID=exon:HG00140_ch_T0001599:2;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66497451	66498002	.	+	.	source_transcript=ENST00000711274.1;source_transcript_name=WASH6P-219;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711274.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711274.1;transcript_score=299.63800000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711274.1,ENST00000711274.1;transcript_id=HG00140_ch_T0001599;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001599;transcript_name=HG00140_ch_T0001599;gene_name=WASH6P;ID=intron:HG00140_ch_T0001599:2;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66498003	66498198	.	+	.	source_transcript=ENST00000711274.1;source_transcript_name=WASH6P-219;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711274.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711274.1;transcript_score=299.63800000000003;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711274.1,ENST00000711274.1;transcript_id=HG00140_ch_T0001599;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001599;transcript_name=HG00140_ch_T0001599;gene_name=WASH6P;ID=exon:HG00140_ch_T0001599:3;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	66496668	66498326	1000	+	.	source_transcript=ENST00000711275.1;source_transcript_name=WASH6P-220;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711275.1;transcript_score=299.488;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711275.1,ENST00000711275.1;transcript_id=HG00140_ch_T0001600;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_G0000559;transcript_name=HG00140_ch_T0001600;gene_name=WASH6P;ID=HG00140_ch_T0001600;Name=WASH6P
HG00140_chrY	CAT	exon	66496668	66496783	.	+	.	source_transcript=ENST00000711275.1;source_transcript_name=WASH6P-220;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711275.1;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711275.1,ENST00000711275.1;transcript_id=HG00140_ch_T0001600;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001600;transcript_name=HG00140_ch_T0001600;gene_name=WASH6P;ID=exon:HG00140_ch_T0001600:0;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66496784	66496989	.	+	.	source_transcript=ENST00000711275.1;source_transcript_name=WASH6P-220;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711275.1;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711275.1,ENST00000711275.1;transcript_id=HG00140_ch_T0001600;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001600;transcript_name=HG00140_ch_T0001600;gene_name=WASH6P;ID=intron:HG00140_ch_T0001600:0;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66496990	66497136	.	+	.	source_transcript=ENST00000711275.1;source_transcript_name=WASH6P-220;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711275.1;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711275.1,ENST00000711275.1;transcript_id=HG00140_ch_T0001600;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001600;transcript_name=HG00140_ch_T0001600;gene_name=WASH6P;ID=exon:HG00140_ch_T0001600:1;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66497137	66497304	.	+	.	source_transcript=ENST00000711275.1;source_transcript_name=WASH6P-220;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711275.1;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711275.1,ENST00000711275.1;transcript_id=HG00140_ch_T0001600;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001600;transcript_name=HG00140_ch_T0001600;gene_name=WASH6P;ID=intron:HG00140_ch_T0001600:1;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66497305	66497450	.	+	.	source_transcript=ENST00000711275.1;source_transcript_name=WASH6P-220;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711275.1;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711275.1,ENST00000711275.1;transcript_id=HG00140_ch_T0001600;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001600;transcript_name=HG00140_ch_T0001600;gene_name=WASH6P;ID=exon:HG00140_ch_T0001600:2;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66497451	66497689	.	+	.	source_transcript=ENST00000711275.1;source_transcript_name=WASH6P-220;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711275.1;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711275.1,ENST00000711275.1;transcript_id=HG00140_ch_T0001600;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001600;transcript_name=HG00140_ch_T0001600;gene_name=WASH6P;ID=intron:HG00140_ch_T0001600:2;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66497690	66497825	.	+	.	source_transcript=ENST00000711275.1;source_transcript_name=WASH6P-220;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711275.1;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711275.1,ENST00000711275.1;transcript_id=HG00140_ch_T0001600;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001600;transcript_name=HG00140_ch_T0001600;gene_name=WASH6P;ID=exon:HG00140_ch_T0001600:3;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66497826	66498002	.	+	.	source_transcript=ENST00000711275.1;source_transcript_name=WASH6P-220;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711275.1;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711275.1,ENST00000711275.1;transcript_id=HG00140_ch_T0001600;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001600;transcript_name=HG00140_ch_T0001600;gene_name=WASH6P;ID=intron:HG00140_ch_T0001600:3;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66498003	66498204	.	+	.	source_transcript=ENST00000711275.1;source_transcript_name=WASH6P-220;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711275.1;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711275.1,ENST00000711275.1;transcript_id=HG00140_ch_T0001600;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001600;transcript_name=HG00140_ch_T0001600;gene_name=WASH6P;ID=exon:HG00140_ch_T0001600:4;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66498205	66498292	.	+	.	source_transcript=ENST00000711275.1;source_transcript_name=WASH6P-220;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711275.1;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711275.1,ENST00000711275.1;transcript_id=HG00140_ch_T0001600;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001600;transcript_name=HG00140_ch_T0001600;gene_name=WASH6P;ID=intron:HG00140_ch_T0001600:4;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66498293	66498326	.	+	.	source_transcript=ENST00000711275.1;source_transcript_name=WASH6P-220;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711275.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711275.1;transcript_score=299.488;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711275.1,ENST00000711275.1;transcript_id=HG00140_ch_T0001600;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001600;transcript_name=HG00140_ch_T0001600;gene_name=WASH6P;ID=exon:HG00140_ch_T0001600:5;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	66496679	66500654	1000	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=299.83;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=HG00140_ch_T0001601;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_G0000559;transcript_name=HG00140_ch_T0001601;gene_name=WASH6P;ID=HG00140_ch_T0001601;Name=WASH6P
HG00140_chrY	CAT	exon	66496679	66496783	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=299.83;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=HG00140_ch_T0001601;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001601;transcript_name=HG00140_ch_T0001601;gene_name=WASH6P;ID=exon:HG00140_ch_T0001601:0;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66496784	66496989	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=299.83;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=HG00140_ch_T0001601;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001601;transcript_name=HG00140_ch_T0001601;gene_name=WASH6P;ID=intron:HG00140_ch_T0001601:0;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66496990	66497136	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=299.83;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=HG00140_ch_T0001601;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001601;transcript_name=HG00140_ch_T0001601;gene_name=WASH6P;ID=exon:HG00140_ch_T0001601:1;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66497137	66497313	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=299.83;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=HG00140_ch_T0001601;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001601;transcript_name=HG00140_ch_T0001601;gene_name=WASH6P;ID=intron:HG00140_ch_T0001601:1;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66497314	66497825	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=299.83;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=HG00140_ch_T0001601;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001601;transcript_name=HG00140_ch_T0001601;gene_name=WASH6P;ID=exon:HG00140_ch_T0001601:2;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66497826	66498002	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=299.83;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=HG00140_ch_T0001601;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001601;transcript_name=HG00140_ch_T0001601;gene_name=WASH6P;ID=intron:HG00140_ch_T0001601:2;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66498003	66498200	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=299.83;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=HG00140_ch_T0001601;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001601;transcript_name=HG00140_ch_T0001601;gene_name=WASH6P;ID=exon:HG00140_ch_T0001601:3;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66498201	66498292	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=299.83;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=HG00140_ch_T0001601;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001601;transcript_name=HG00140_ch_T0001601;gene_name=WASH6P;ID=intron:HG00140_ch_T0001601:3;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66498293	66498451	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=299.83;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=HG00140_ch_T0001601;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001601;transcript_name=HG00140_ch_T0001601;gene_name=WASH6P;ID=exon:HG00140_ch_T0001601:4;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66498452	66499107	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=299.83;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=HG00140_ch_T0001601;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001601;transcript_name=HG00140_ch_T0001601;gene_name=WASH6P;ID=intron:HG00140_ch_T0001601:4;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66499108	66499260	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=299.83;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=HG00140_ch_T0001601;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001601;transcript_name=HG00140_ch_T0001601;gene_name=WASH6P;ID=exon:HG00140_ch_T0001601:5;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66499261	66500019	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=299.83;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=HG00140_ch_T0001601;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001601;transcript_name=HG00140_ch_T0001601;gene_name=WASH6P;ID=intron:HG00140_ch_T0001601:5;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66500020	66500088	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=299.83;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=HG00140_ch_T0001601;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001601;transcript_name=HG00140_ch_T0001601;gene_name=WASH6P;ID=exon:HG00140_ch_T0001601:6;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66500089	66500228	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=299.83;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=HG00140_ch_T0001601;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001601;transcript_name=HG00140_ch_T0001601;gene_name=WASH6P;ID=intron:HG00140_ch_T0001601:6;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66500229	66500654	.	+	.	source_transcript=ENST00000711276.1;source_transcript_name=WASH6P-221;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711276.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711276.1;transcript_score=299.83;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711276.1,ENST00000711276.1;transcript_id=HG00140_ch_T0001601;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001601;transcript_name=HG00140_ch_T0001601;gene_name=WASH6P;ID=exon:HG00140_ch_T0001601:7;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	66496679	66500654	1000	+	.	source_transcript=ENST00000711277.1;source_transcript_name=WASH6P-222;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711277.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711277.1;transcript_score=299.373;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711277.1,ENST00000711277.1;transcript_id=HG00140_ch_T0001602;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_G0000559;transcript_name=HG00140_ch_T0001602;gene_name=WASH6P;ID=HG00140_ch_T0001602;Name=WASH6P
HG00140_chrY	CAT	exon	66496679	66496783	.	+	.	source_transcript=ENST00000711277.1;source_transcript_name=WASH6P-222;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711277.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711277.1;transcript_score=299.373;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711277.1,ENST00000711277.1;transcript_id=HG00140_ch_T0001602;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001602;transcript_name=HG00140_ch_T0001602;gene_name=WASH6P;ID=exon:HG00140_ch_T0001602:0;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66496784	66496989	.	+	.	source_transcript=ENST00000711277.1;source_transcript_name=WASH6P-222;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711277.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711277.1;transcript_score=299.373;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711277.1,ENST00000711277.1;transcript_id=HG00140_ch_T0001602;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001602;transcript_name=HG00140_ch_T0001602;gene_name=WASH6P;ID=intron:HG00140_ch_T0001602:0;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66496990	66497136	.	+	.	source_transcript=ENST00000711277.1;source_transcript_name=WASH6P-222;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711277.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711277.1;transcript_score=299.373;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711277.1,ENST00000711277.1;transcript_id=HG00140_ch_T0001602;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001602;transcript_name=HG00140_ch_T0001602;gene_name=WASH6P;ID=exon:HG00140_ch_T0001602:1;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66497137	66497313	.	+	.	source_transcript=ENST00000711277.1;source_transcript_name=WASH6P-222;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711277.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711277.1;transcript_score=299.373;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711277.1,ENST00000711277.1;transcript_id=HG00140_ch_T0001602;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001602;transcript_name=HG00140_ch_T0001602;gene_name=WASH6P;ID=intron:HG00140_ch_T0001602:1;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66497314	66497825	.	+	.	source_transcript=ENST00000711277.1;source_transcript_name=WASH6P-222;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711277.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711277.1;transcript_score=299.373;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711277.1,ENST00000711277.1;transcript_id=HG00140_ch_T0001602;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001602;transcript_name=HG00140_ch_T0001602;gene_name=WASH6P;ID=exon:HG00140_ch_T0001602:2;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66497826	66498002	.	+	.	source_transcript=ENST00000711277.1;source_transcript_name=WASH6P-222;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711277.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711277.1;transcript_score=299.373;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711277.1,ENST00000711277.1;transcript_id=HG00140_ch_T0001602;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001602;transcript_name=HG00140_ch_T0001602;gene_name=WASH6P;ID=intron:HG00140_ch_T0001602:2;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66498003	66498200	.	+	.	source_transcript=ENST00000711277.1;source_transcript_name=WASH6P-222;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711277.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711277.1;transcript_score=299.373;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711277.1,ENST00000711277.1;transcript_id=HG00140_ch_T0001602;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001602;transcript_name=HG00140_ch_T0001602;gene_name=WASH6P;ID=exon:HG00140_ch_T0001602:3;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66498201	66498292	.	+	.	source_transcript=ENST00000711277.1;source_transcript_name=WASH6P-222;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711277.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711277.1;transcript_score=299.373;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711277.1,ENST00000711277.1;transcript_id=HG00140_ch_T0001602;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001602;transcript_name=HG00140_ch_T0001602;gene_name=WASH6P;ID=intron:HG00140_ch_T0001602:3;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66498293	66500088	.	+	.	source_transcript=ENST00000711277.1;source_transcript_name=WASH6P-222;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711277.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711277.1;transcript_score=299.373;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711277.1,ENST00000711277.1;transcript_id=HG00140_ch_T0001602;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001602;transcript_name=HG00140_ch_T0001602;gene_name=WASH6P;ID=exon:HG00140_ch_T0001602:4;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66500089	66500228	.	+	.	source_transcript=ENST00000711277.1;source_transcript_name=WASH6P-222;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711277.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711277.1;transcript_score=299.373;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711277.1,ENST00000711277.1;transcript_id=HG00140_ch_T0001602;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001602;transcript_name=HG00140_ch_T0001602;gene_name=WASH6P;ID=intron:HG00140_ch_T0001602:4;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66500229	66500654	.	+	.	source_transcript=ENST00000711277.1;source_transcript_name=WASH6P-222;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711277.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711277.1;transcript_score=299.373;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711277.1,ENST00000711277.1;transcript_id=HG00140_ch_T0001602;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001602;transcript_name=HG00140_ch_T0001602;gene_name=WASH6P;ID=exon:HG00140_ch_T0001602:5;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	66496679	66500698	1000	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=299.781;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=HG00140_ch_T0001603;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_G0000559;transcript_name=HG00140_ch_T0001603;gene_name=WASH6P;ID=HG00140_ch_T0001603;Name=WASH6P
HG00140_chrY	CAT	exon	66496679	66496783	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=299.781;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=HG00140_ch_T0001603;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001603;transcript_name=HG00140_ch_T0001603;gene_name=WASH6P;ID=exon:HG00140_ch_T0001603:0;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66496784	66496989	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=299.781;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=HG00140_ch_T0001603;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001603;transcript_name=HG00140_ch_T0001603;gene_name=WASH6P;ID=intron:HG00140_ch_T0001603:0;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66496990	66497136	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=299.781;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=HG00140_ch_T0001603;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001603;transcript_name=HG00140_ch_T0001603;gene_name=WASH6P;ID=exon:HG00140_ch_T0001603:1;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66497137	66497304	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=299.781;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=HG00140_ch_T0001603;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001603;transcript_name=HG00140_ch_T0001603;gene_name=WASH6P;ID=intron:HG00140_ch_T0001603:1;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66497305	66497825	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=299.781;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=HG00140_ch_T0001603;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001603;transcript_name=HG00140_ch_T0001603;gene_name=WASH6P;ID=exon:HG00140_ch_T0001603:2;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66497826	66498002	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=299.781;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=HG00140_ch_T0001603;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001603;transcript_name=HG00140_ch_T0001603;gene_name=WASH6P;ID=intron:HG00140_ch_T0001603:2;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66498003	66498204	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=299.781;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=HG00140_ch_T0001603;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001603;transcript_name=HG00140_ch_T0001603;gene_name=WASH6P;ID=exon:HG00140_ch_T0001603:3;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66498205	66498292	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=299.781;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=HG00140_ch_T0001603;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001603;transcript_name=HG00140_ch_T0001603;gene_name=WASH6P;ID=intron:HG00140_ch_T0001603:3;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66498293	66498451	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=299.781;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=HG00140_ch_T0001603;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001603;transcript_name=HG00140_ch_T0001603;gene_name=WASH6P;ID=exon:HG00140_ch_T0001603:4;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66498452	66499107	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=299.781;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=HG00140_ch_T0001603;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001603;transcript_name=HG00140_ch_T0001603;gene_name=WASH6P;ID=intron:HG00140_ch_T0001603:4;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66499108	66499260	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=299.781;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=HG00140_ch_T0001603;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001603;transcript_name=HG00140_ch_T0001603;gene_name=WASH6P;ID=exon:HG00140_ch_T0001603:5;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66499261	66500019	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=299.781;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=HG00140_ch_T0001603;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001603;transcript_name=HG00140_ch_T0001603;gene_name=WASH6P;ID=intron:HG00140_ch_T0001603:5;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66500020	66500088	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=299.781;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=HG00140_ch_T0001603;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001603;transcript_name=HG00140_ch_T0001603;gene_name=WASH6P;ID=exon:HG00140_ch_T0001603:6;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66500089	66500228	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=299.781;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=HG00140_ch_T0001603;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001603;transcript_name=HG00140_ch_T0001603;gene_name=WASH6P;ID=intron:HG00140_ch_T0001603:6;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66500229	66500698	.	+	.	source_transcript=ENST00000711278.1;source_transcript_name=WASH6P-223;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711278.1;transcript_score=299.781;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711278.1,ENST00000711278.1;transcript_id=HG00140_ch_T0001603;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001603;transcript_name=HG00140_ch_T0001603;gene_name=WASH6P;ID=exon:HG00140_ch_T0001603:7;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	66496990	66498083	1000	+	.	source_transcript=ENST00000711279.1;source_transcript_name=WASH6P-224;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711279.1;transcript_score=299.262;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711279.1,ENST00000711279.1;transcript_id=HG00140_ch_T0001605;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_G0000559;transcript_name=HG00140_ch_T0001605;gene_name=WASH6P;ID=HG00140_ch_T0001605;Name=WASH6P
HG00140_chrY	CAT	exon	66496990	66497450	.	+	.	source_transcript=ENST00000711279.1;source_transcript_name=WASH6P-224;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711279.1;transcript_score=299.262;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711279.1,ENST00000711279.1;transcript_id=HG00140_ch_T0001605;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001605;transcript_name=HG00140_ch_T0001605;gene_name=WASH6P;ID=exon:HG00140_ch_T0001605:0;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66497451	66498002	.	+	.	source_transcript=ENST00000711279.1;source_transcript_name=WASH6P-224;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711279.1;transcript_score=299.262;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711279.1,ENST00000711279.1;transcript_id=HG00140_ch_T0001605;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001605;transcript_name=HG00140_ch_T0001605;gene_name=WASH6P;ID=intron:HG00140_ch_T0001605:0;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66498003	66498083	.	+	.	source_transcript=ENST00000711279.1;source_transcript_name=WASH6P-224;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711279.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711279.1;transcript_score=299.262;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711279.1,ENST00000711279.1;transcript_id=HG00140_ch_T0001605;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001605;transcript_name=HG00140_ch_T0001605;gene_name=WASH6P;ID=exon:HG00140_ch_T0001605:1;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	66496990	66498380	1000	+	.	source_transcript=ENST00000711280.1;source_transcript_name=WASH6P-225;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711280.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711280.1;transcript_score=299.618;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711280.1,ENST00000711280.1;transcript_id=HG00140_ch_T0001606;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_G0000559;transcript_name=HG00140_ch_T0001606;gene_name=WASH6P;ID=HG00140_ch_T0001606;Name=WASH6P
HG00140_chrY	CAT	exon	66496990	66497136	.	+	.	source_transcript=ENST00000711280.1;source_transcript_name=WASH6P-225;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711280.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711280.1;transcript_score=299.618;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711280.1,ENST00000711280.1;transcript_id=HG00140_ch_T0001606;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001606;transcript_name=HG00140_ch_T0001606;gene_name=WASH6P;ID=exon:HG00140_ch_T0001606:0;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66497137	66497313	.	+	.	source_transcript=ENST00000711280.1;source_transcript_name=WASH6P-225;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711280.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711280.1;transcript_score=299.618;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711280.1,ENST00000711280.1;transcript_id=HG00140_ch_T0001606;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001606;transcript_name=HG00140_ch_T0001606;gene_name=WASH6P;ID=intron:HG00140_ch_T0001606:0;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66497314	66497530	.	+	.	source_transcript=ENST00000711280.1;source_transcript_name=WASH6P-225;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711280.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711280.1;transcript_score=299.618;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711280.1,ENST00000711280.1;transcript_id=HG00140_ch_T0001606;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001606;transcript_name=HG00140_ch_T0001606;gene_name=WASH6P;ID=exon:HG00140_ch_T0001606:1;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66497531	66497689	.	+	.	source_transcript=ENST00000711280.1;source_transcript_name=WASH6P-225;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711280.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711280.1;transcript_score=299.618;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711280.1,ENST00000711280.1;transcript_id=HG00140_ch_T0001606;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001606;transcript_name=HG00140_ch_T0001606;gene_name=WASH6P;ID=intron:HG00140_ch_T0001606:1;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66497690	66497825	.	+	.	source_transcript=ENST00000711280.1;source_transcript_name=WASH6P-225;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711280.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711280.1;transcript_score=299.618;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711280.1,ENST00000711280.1;transcript_id=HG00140_ch_T0001606;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001606;transcript_name=HG00140_ch_T0001606;gene_name=WASH6P;ID=exon:HG00140_ch_T0001606:2;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66497826	66498002	.	+	.	source_transcript=ENST00000711280.1;source_transcript_name=WASH6P-225;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711280.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711280.1;transcript_score=299.618;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711280.1,ENST00000711280.1;transcript_id=HG00140_ch_T0001606;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001606;transcript_name=HG00140_ch_T0001606;gene_name=WASH6P;ID=intron:HG00140_ch_T0001606:2;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66498003	66498200	.	+	.	source_transcript=ENST00000711280.1;source_transcript_name=WASH6P-225;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711280.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711280.1;transcript_score=299.618;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711280.1,ENST00000711280.1;transcript_id=HG00140_ch_T0001606;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001606;transcript_name=HG00140_ch_T0001606;gene_name=WASH6P;ID=exon:HG00140_ch_T0001606:3;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66498201	66498292	.	+	.	source_transcript=ENST00000711280.1;source_transcript_name=WASH6P-225;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711280.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711280.1;transcript_score=299.618;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711280.1,ENST00000711280.1;transcript_id=HG00140_ch_T0001606;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001606;transcript_name=HG00140_ch_T0001606;gene_name=WASH6P;ID=intron:HG00140_ch_T0001606:3;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66498293	66498380	.	+	.	source_transcript=ENST00000711280.1;source_transcript_name=WASH6P-225;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711280.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711280.1;transcript_score=299.618;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711280.1,ENST00000711280.1;transcript_id=HG00140_ch_T0001606;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001606;transcript_name=HG00140_ch_T0001606;gene_name=WASH6P;ID=exon:HG00140_ch_T0001606:4;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	66496990	66500651	1000	+	.	source_transcript=ENST00000711281.1;source_transcript_name=WASH6P-226;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711281.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711281.1;transcript_score=299.329;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711281.1,ENST00000711281.1;transcript_id=HG00140_ch_T0001607;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_G0000559;transcript_name=HG00140_ch_T0001607;gene_name=WASH6P;ID=HG00140_ch_T0001607;Name=WASH6P
HG00140_chrY	CAT	exon	66496990	66497136	.	+	.	source_transcript=ENST00000711281.1;source_transcript_name=WASH6P-226;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711281.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711281.1;transcript_score=299.329;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711281.1,ENST00000711281.1;transcript_id=HG00140_ch_T0001607;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001607;transcript_name=HG00140_ch_T0001607;gene_name=WASH6P;ID=exon:HG00140_ch_T0001607:0;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66497137	66497313	.	+	.	source_transcript=ENST00000711281.1;source_transcript_name=WASH6P-226;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711281.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711281.1;transcript_score=299.329;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711281.1,ENST00000711281.1;transcript_id=HG00140_ch_T0001607;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001607;transcript_name=HG00140_ch_T0001607;gene_name=WASH6P;ID=intron:HG00140_ch_T0001607:0;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66497314	66497450	.	+	.	source_transcript=ENST00000711281.1;source_transcript_name=WASH6P-226;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711281.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711281.1;transcript_score=299.329;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711281.1,ENST00000711281.1;transcript_id=HG00140_ch_T0001607;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001607;transcript_name=HG00140_ch_T0001607;gene_name=WASH6P;ID=exon:HG00140_ch_T0001607:1;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66497451	66497689	.	+	.	source_transcript=ENST00000711281.1;source_transcript_name=WASH6P-226;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711281.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711281.1;transcript_score=299.329;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711281.1,ENST00000711281.1;transcript_id=HG00140_ch_T0001607;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001607;transcript_name=HG00140_ch_T0001607;gene_name=WASH6P;ID=intron:HG00140_ch_T0001607:1;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66497690	66497825	.	+	.	source_transcript=ENST00000711281.1;source_transcript_name=WASH6P-226;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711281.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711281.1;transcript_score=299.329;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711281.1,ENST00000711281.1;transcript_id=HG00140_ch_T0001607;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001607;transcript_name=HG00140_ch_T0001607;gene_name=WASH6P;ID=exon:HG00140_ch_T0001607:2;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66497826	66498002	.	+	.	source_transcript=ENST00000711281.1;source_transcript_name=WASH6P-226;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711281.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711281.1;transcript_score=299.329;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711281.1,ENST00000711281.1;transcript_id=HG00140_ch_T0001607;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001607;transcript_name=HG00140_ch_T0001607;gene_name=WASH6P;ID=intron:HG00140_ch_T0001607:2;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66498003	66498200	.	+	.	source_transcript=ENST00000711281.1;source_transcript_name=WASH6P-226;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711281.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711281.1;transcript_score=299.329;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711281.1,ENST00000711281.1;transcript_id=HG00140_ch_T0001607;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001607;transcript_name=HG00140_ch_T0001607;gene_name=WASH6P;ID=exon:HG00140_ch_T0001607:3;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66498201	66498292	.	+	.	source_transcript=ENST00000711281.1;source_transcript_name=WASH6P-226;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711281.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711281.1;transcript_score=299.329;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711281.1,ENST00000711281.1;transcript_id=HG00140_ch_T0001607;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001607;transcript_name=HG00140_ch_T0001607;gene_name=WASH6P;ID=intron:HG00140_ch_T0001607:3;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66498293	66500651	.	+	.	source_transcript=ENST00000711281.1;source_transcript_name=WASH6P-226;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711281.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711281.1;transcript_score=299.329;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711281.1,ENST00000711281.1;transcript_id=HG00140_ch_T0001607;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001607;transcript_name=HG00140_ch_T0001607;gene_name=WASH6P;ID=exon:HG00140_ch_T0001607:4;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	66497777	66498522	1000	+	.	source_transcript=ENST00000711282.1;source_transcript_name=WASH6P-227;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711282.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711282.1;transcript_score=299.848;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711282.1,ENST00000711282.1;transcript_id=HG00140_ch_T0001608;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_G0000559;transcript_name=HG00140_ch_T0001608;gene_name=WASH6P;ID=HG00140_ch_T0001608;Name=WASH6P
HG00140_chrY	CAT	exon	66497777	66498204	.	+	.	source_transcript=ENST00000711282.1;source_transcript_name=WASH6P-227;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711282.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711282.1;transcript_score=299.848;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711282.1,ENST00000711282.1;transcript_id=HG00140_ch_T0001608;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001608;transcript_name=HG00140_ch_T0001608;gene_name=WASH6P;ID=exon:HG00140_ch_T0001608:0;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66498205	66498292	.	+	.	source_transcript=ENST00000711282.1;source_transcript_name=WASH6P-227;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711282.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711282.1;transcript_score=299.848;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711282.1,ENST00000711282.1;transcript_id=HG00140_ch_T0001608;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001608;transcript_name=HG00140_ch_T0001608;gene_name=WASH6P;ID=intron:HG00140_ch_T0001608:0;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66498293	66498522	.	+	.	source_transcript=ENST00000711282.1;source_transcript_name=WASH6P-227;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711282.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711282.1;transcript_score=299.848;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711282.1,ENST00000711282.1;transcript_id=HG00140_ch_T0001608;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001608;transcript_name=HG00140_ch_T0001608;gene_name=WASH6P;ID=exon:HG00140_ch_T0001608:1;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	66498358	66500654	1000	+	.	source_transcript=ENST00000711283.1;source_transcript_name=WASH6P-228;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711283.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711283.1;transcript_score=299.634;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711283.1,ENST00000711283.1;transcript_id=HG00140_ch_T0001609;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_G0000559;transcript_name=HG00140_ch_T0001609;gene_name=WASH6P;ID=HG00140_ch_T0001609;Name=WASH6P
HG00140_chrY	CAT	exon	66498358	66498451	.	+	.	source_transcript=ENST00000711283.1;source_transcript_name=WASH6P-228;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711283.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711283.1;transcript_score=299.634;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711283.1,ENST00000711283.1;transcript_id=HG00140_ch_T0001609;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001609;transcript_name=HG00140_ch_T0001609;gene_name=WASH6P;ID=exon:HG00140_ch_T0001609:0;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66498452	66499107	.	+	.	source_transcript=ENST00000711283.1;source_transcript_name=WASH6P-228;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711283.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711283.1;transcript_score=299.634;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711283.1,ENST00000711283.1;transcript_id=HG00140_ch_T0001609;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001609;transcript_name=HG00140_ch_T0001609;gene_name=WASH6P;ID=intron:HG00140_ch_T0001609:0;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66499108	66500654	.	+	.	source_transcript=ENST00000711283.1;source_transcript_name=WASH6P-228;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711283.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711283.1;transcript_score=299.634;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711283.1,ENST00000711283.1;transcript_id=HG00140_ch_T0001609;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001609;transcript_name=HG00140_ch_T0001609;gene_name=WASH6P;ID=exon:HG00140_ch_T0001609:1;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	66498815	66500542	1000	+	.	source_transcript=ENST00000711284.1;source_transcript_name=WASH6P-229;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711284.1;transcript_score=299.038;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711284.1,ENST00000711284.1;transcript_id=HG00140_ch_T0001610;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_G0000559;transcript_name=HG00140_ch_T0001610;gene_name=WASH6P;ID=HG00140_ch_T0001610;Name=WASH6P
HG00140_chrY	CAT	exon	66498815	66499260	.	+	.	source_transcript=ENST00000711284.1;source_transcript_name=WASH6P-229;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711284.1;transcript_score=299.038;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711284.1,ENST00000711284.1;transcript_id=HG00140_ch_T0001610;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001610;transcript_name=HG00140_ch_T0001610;gene_name=WASH6P;ID=exon:HG00140_ch_T0001610:0;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66499261	66500019	.	+	.	source_transcript=ENST00000711284.1;source_transcript_name=WASH6P-229;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711284.1;transcript_score=299.038;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711284.1,ENST00000711284.1;transcript_id=HG00140_ch_T0001610;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001610;transcript_name=HG00140_ch_T0001610;gene_name=WASH6P;ID=intron:HG00140_ch_T0001610:0;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66500020	66500088	.	+	.	source_transcript=ENST00000711284.1;source_transcript_name=WASH6P-229;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711284.1;transcript_score=299.038;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711284.1,ENST00000711284.1;transcript_id=HG00140_ch_T0001610;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001610;transcript_name=HG00140_ch_T0001610;gene_name=WASH6P;ID=exon:HG00140_ch_T0001610:1;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66500089	66500228	.	+	.	source_transcript=ENST00000711284.1;source_transcript_name=WASH6P-229;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711284.1;transcript_score=299.038;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711284.1,ENST00000711284.1;transcript_id=HG00140_ch_T0001610;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001610;transcript_name=HG00140_ch_T0001610;gene_name=WASH6P;ID=intron:HG00140_ch_T0001610:1;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66500229	66500542	.	+	.	source_transcript=ENST00000711284.1;source_transcript_name=WASH6P-229;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=retained_intron;alignment_id=ENST00000711284.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711284.1;transcript_score=299.038;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711284.1,ENST00000711284.1;transcript_id=HG00140_ch_T0001610;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001610;transcript_name=HG00140_ch_T0001610;gene_name=WASH6P;ID=exon:HG00140_ch_T0001610:2;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	66499059	66500542	1000	+	.	source_transcript=ENST00000711285.1;source_transcript_name=WASH6P-230;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711285.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711285.1,ENST00000711285.1;transcript_id=HG00140_ch_T0001611;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_G0000559;transcript_name=HG00140_ch_T0001611;gene_name=WASH6P;ID=HG00140_ch_T0001611;Name=WASH6P
HG00140_chrY	CAT	exon	66499059	66499260	.	+	.	source_transcript=ENST00000711285.1;source_transcript_name=WASH6P-230;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711285.1,ENST00000711285.1;transcript_id=HG00140_ch_T0001611;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001611;transcript_name=HG00140_ch_T0001611;gene_name=WASH6P;ID=exon:HG00140_ch_T0001611:0;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66499261	66500019	.	+	.	source_transcript=ENST00000711285.1;source_transcript_name=WASH6P-230;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711285.1,ENST00000711285.1;transcript_id=HG00140_ch_T0001611;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001611;transcript_name=HG00140_ch_T0001611;gene_name=WASH6P;ID=intron:HG00140_ch_T0001611:0;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66500020	66500037	.	+	.	source_transcript=ENST00000711285.1;source_transcript_name=WASH6P-230;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711285.1,ENST00000711285.1;transcript_id=HG00140_ch_T0001611;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001611;transcript_name=HG00140_ch_T0001611;gene_name=WASH6P;ID=exon:HG00140_ch_T0001611:1;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66500038	66500228	.	+	.	source_transcript=ENST00000711285.1;source_transcript_name=WASH6P-230;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711285.1,ENST00000711285.1;transcript_id=HG00140_ch_T0001611;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001611;transcript_name=HG00140_ch_T0001611;gene_name=WASH6P;ID=intron:HG00140_ch_T0001611:1;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66500229	66500542	.	+	.	source_transcript=ENST00000711285.1;source_transcript_name=WASH6P-230;source_gene=ENSG00000292372.1;source_gene_biotype=protein_coding;original_gene_id=ENSG00000292372.1;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000711285.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711285.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=WASH6P;alternative_source_transcripts=ENST00000711285.1,ENST00000711285.1;transcript_id=HG00140_ch_T0001611;gene_id=HG00140_ch_G0000559;Parent=HG00140_ch_T0001611;transcript_name=HG00140_ch_T0001611;gene_name=WASH6P;ID=exon:HG00140_ch_T0001611:2;Name=WASH6P;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	66496987	66504094	.	-	.	source_gene_common_name=ENSG00000310542;source_gene=ENSG00000310542.1;gene_id=HG00140_ch_G0000560;gene_biotype=lncRNA;gene_name=ENSG00000310542;gene_sources=liftoff;ID=HG00140_ch_G0000560;Name=ENSG00000310542
HG00140_chrY	CAT	transcript	66496987	66500654	1000	-	.	source_transcript=ENST00000850693.1;source_transcript_name=ENST00000850693;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850693.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850693.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001604;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_G0000560;transcript_name=HG00140_ch_T0001604;gene_name=ENSG00000310542;ID=HG00140_ch_T0001604;Name=ENSG00000310542
HG00140_chrY	CAT	exon	66496987	66497045	.	-	.	source_transcript=ENST00000850693.1;source_transcript_name=ENST00000850693;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850693.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850693.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001604;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001604;transcript_name=HG00140_ch_T0001604;gene_name=ENSG00000310542;ID=exon:HG00140_ch_T0001604:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66497046	66500579	.	-	.	source_transcript=ENST00000850693.1;source_transcript_name=ENST00000850693;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850693.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850693.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001604;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001604;transcript_name=HG00140_ch_T0001604;gene_name=ENSG00000310542;ID=intron:HG00140_ch_T0001604:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66500580	66500654	.	-	.	source_transcript=ENST00000850693.1;source_transcript_name=ENST00000850693;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850693.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850693.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001604;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001604;transcript_name=HG00140_ch_T0001604;gene_name=ENSG00000310542;ID=exon:HG00140_ch_T0001604:1;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	66500645	66504025	1000	-	.	source_transcript=ENST00000850696.1;source_transcript_name=ENST00000850696;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850696.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001612;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_G0000560;transcript_name=HG00140_ch_T0001612;gene_name=ENSG00000310542;ID=HG00140_ch_T0001612;Name=ENSG00000310542
HG00140_chrY	CAT	exon	66500645	66500782	.	-	.	source_transcript=ENST00000850696.1;source_transcript_name=ENST00000850696;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001612;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001612;transcript_name=HG00140_ch_T0001612;gene_name=ENSG00000310542;ID=exon:HG00140_ch_T0001612:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66500783	66501369	.	-	.	source_transcript=ENST00000850696.1;source_transcript_name=ENST00000850696;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001612;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001612;transcript_name=HG00140_ch_T0001612;gene_name=ENSG00000310542;ID=intron:HG00140_ch_T0001612:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66501370	66501593	.	-	.	source_transcript=ENST00000850696.1;source_transcript_name=ENST00000850696;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001612;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001612;transcript_name=HG00140_ch_T0001612;gene_name=ENSG00000310542;ID=exon:HG00140_ch_T0001612:1;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66501594	66502324	.	-	.	source_transcript=ENST00000850696.1;source_transcript_name=ENST00000850696;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001612;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001612;transcript_name=HG00140_ch_T0001612;gene_name=ENSG00000310542;ID=intron:HG00140_ch_T0001612:1;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66502325	66502433	.	-	.	source_transcript=ENST00000850696.1;source_transcript_name=ENST00000850696;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001612;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001612;transcript_name=HG00140_ch_T0001612;gene_name=ENSG00000310542;ID=exon:HG00140_ch_T0001612:2;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66502434	66502818	.	-	.	source_transcript=ENST00000850696.1;source_transcript_name=ENST00000850696;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001612;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001612;transcript_name=HG00140_ch_T0001612;gene_name=ENSG00000310542;ID=intron:HG00140_ch_T0001612:2;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66502819	66503036	.	-	.	source_transcript=ENST00000850696.1;source_transcript_name=ENST00000850696;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001612;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001612;transcript_name=HG00140_ch_T0001612;gene_name=ENSG00000310542;ID=exon:HG00140_ch_T0001612:3;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66503037	66503829	.	-	.	source_transcript=ENST00000850696.1;source_transcript_name=ENST00000850696;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001612;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001612;transcript_name=HG00140_ch_T0001612;gene_name=ENSG00000310542;ID=intron:HG00140_ch_T0001612:3;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66503830	66504025	.	-	.	source_transcript=ENST00000850696.1;source_transcript_name=ENST00000850696;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850696.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001612;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001612;transcript_name=HG00140_ch_T0001612;gene_name=ENSG00000310542;ID=exon:HG00140_ch_T0001612:4;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	66500648	66503916	1000	-	.	source_transcript=ENST00000850699.1;source_transcript_name=ENST00000850699;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850699.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001613;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_G0000560;transcript_name=HG00140_ch_T0001613;gene_name=ENSG00000310542;ID=HG00140_ch_T0001613;Name=ENSG00000310542
HG00140_chrY	CAT	exon	66500648	66501563	.	-	.	source_transcript=ENST00000850699.1;source_transcript_name=ENST00000850699;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001613;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001613;transcript_name=HG00140_ch_T0001613;gene_name=ENSG00000310542;ID=exon:HG00140_ch_T0001613:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66501564	66502348	.	-	.	source_transcript=ENST00000850699.1;source_transcript_name=ENST00000850699;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001613;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001613;transcript_name=HG00140_ch_T0001613;gene_name=ENSG00000310542;ID=intron:HG00140_ch_T0001613:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66502349	66502451	.	-	.	source_transcript=ENST00000850699.1;source_transcript_name=ENST00000850699;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001613;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001613;transcript_name=HG00140_ch_T0001613;gene_name=ENSG00000310542;ID=exon:HG00140_ch_T0001613:1;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66502452	66502818	.	-	.	source_transcript=ENST00000850699.1;source_transcript_name=ENST00000850699;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001613;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001613;transcript_name=HG00140_ch_T0001613;gene_name=ENSG00000310542;ID=intron:HG00140_ch_T0001613:1;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66502819	66503036	.	-	.	source_transcript=ENST00000850699.1;source_transcript_name=ENST00000850699;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001613;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001613;transcript_name=HG00140_ch_T0001613;gene_name=ENSG00000310542;ID=exon:HG00140_ch_T0001613:2;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66503037	66503829	.	-	.	source_transcript=ENST00000850699.1;source_transcript_name=ENST00000850699;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001613;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001613;transcript_name=HG00140_ch_T0001613;gene_name=ENSG00000310542;ID=intron:HG00140_ch_T0001613:2;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66503830	66503916	.	-	.	source_transcript=ENST00000850699.1;source_transcript_name=ENST00000850699;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850699.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850699.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001613;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001613;transcript_name=HG00140_ch_T0001613;gene_name=ENSG00000310542;ID=exon:HG00140_ch_T0001613:3;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	66500649	66504021	1000	-	.	source_transcript=ENST00000850697.1;source_transcript_name=ENST00000850697;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850697.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001614;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_G0000560;transcript_name=HG00140_ch_T0001614;gene_name=ENSG00000310542;ID=HG00140_ch_T0001614;Name=ENSG00000310542
HG00140_chrY	CAT	exon	66500649	66501821	.	-	.	source_transcript=ENST00000850697.1;source_transcript_name=ENST00000850697;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001614;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001614;transcript_name=HG00140_ch_T0001614;gene_name=ENSG00000310542;ID=exon:HG00140_ch_T0001614:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66501822	66502348	.	-	.	source_transcript=ENST00000850697.1;source_transcript_name=ENST00000850697;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001614;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001614;transcript_name=HG00140_ch_T0001614;gene_name=ENSG00000310542;ID=intron:HG00140_ch_T0001614:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66502349	66502433	.	-	.	source_transcript=ENST00000850697.1;source_transcript_name=ENST00000850697;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001614;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001614;transcript_name=HG00140_ch_T0001614;gene_name=ENSG00000310542;ID=exon:HG00140_ch_T0001614:1;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66502434	66502818	.	-	.	source_transcript=ENST00000850697.1;source_transcript_name=ENST00000850697;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001614;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001614;transcript_name=HG00140_ch_T0001614;gene_name=ENSG00000310542;ID=intron:HG00140_ch_T0001614:1;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66502819	66503036	.	-	.	source_transcript=ENST00000850697.1;source_transcript_name=ENST00000850697;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001614;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001614;transcript_name=HG00140_ch_T0001614;gene_name=ENSG00000310542;ID=exon:HG00140_ch_T0001614:2;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66503037	66503829	.	-	.	source_transcript=ENST00000850697.1;source_transcript_name=ENST00000850697;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001614;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001614;transcript_name=HG00140_ch_T0001614;gene_name=ENSG00000310542;ID=intron:HG00140_ch_T0001614:2;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66503830	66504021	.	-	.	source_transcript=ENST00000850697.1;source_transcript_name=ENST00000850697;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850697.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850697.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001614;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001614;transcript_name=HG00140_ch_T0001614;gene_name=ENSG00000310542;ID=exon:HG00140_ch_T0001614:3;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	66500649	66504054	1000	-	.	source_transcript=ENST00000850695.1;source_transcript_name=ENST00000850695;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850695.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850695.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001615;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_G0000560;transcript_name=HG00140_ch_T0001615;gene_name=ENSG00000310542;ID=HG00140_ch_T0001615;Name=ENSG00000310542
HG00140_chrY	CAT	exon	66500649	66500782	.	-	.	source_transcript=ENST00000850695.1;source_transcript_name=ENST00000850695;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850695.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850695.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001615;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001615;transcript_name=HG00140_ch_T0001615;gene_name=ENSG00000310542;ID=exon:HG00140_ch_T0001615:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66500783	66501369	.	-	.	source_transcript=ENST00000850695.1;source_transcript_name=ENST00000850695;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850695.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850695.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001615;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001615;transcript_name=HG00140_ch_T0001615;gene_name=ENSG00000310542;ID=intron:HG00140_ch_T0001615:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66501370	66501593	.	-	.	source_transcript=ENST00000850695.1;source_transcript_name=ENST00000850695;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850695.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850695.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001615;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001615;transcript_name=HG00140_ch_T0001615;gene_name=ENSG00000310542;ID=exon:HG00140_ch_T0001615:1;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66501594	66502348	.	-	.	source_transcript=ENST00000850695.1;source_transcript_name=ENST00000850695;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850695.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850695.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001615;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001615;transcript_name=HG00140_ch_T0001615;gene_name=ENSG00000310542;ID=intron:HG00140_ch_T0001615:1;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66502349	66502433	.	-	.	source_transcript=ENST00000850695.1;source_transcript_name=ENST00000850695;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850695.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850695.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001615;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001615;transcript_name=HG00140_ch_T0001615;gene_name=ENSG00000310542;ID=exon:HG00140_ch_T0001615:2;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66502434	66502818	.	-	.	source_transcript=ENST00000850695.1;source_transcript_name=ENST00000850695;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850695.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850695.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001615;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001615;transcript_name=HG00140_ch_T0001615;gene_name=ENSG00000310542;ID=intron:HG00140_ch_T0001615:2;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66502819	66503036	.	-	.	source_transcript=ENST00000850695.1;source_transcript_name=ENST00000850695;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850695.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850695.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001615;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001615;transcript_name=HG00140_ch_T0001615;gene_name=ENSG00000310542;ID=exon:HG00140_ch_T0001615:3;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66503037	66504017	.	-	.	source_transcript=ENST00000850695.1;source_transcript_name=ENST00000850695;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850695.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850695.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001615;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001615;transcript_name=HG00140_ch_T0001615;gene_name=ENSG00000310542;ID=intron:HG00140_ch_T0001615:3;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66504018	66504054	.	-	.	source_transcript=ENST00000850695.1;source_transcript_name=ENST00000850695;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850695.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850695.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001615;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001615;transcript_name=HG00140_ch_T0001615;gene_name=ENSG00000310542;ID=exon:HG00140_ch_T0001615:4;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	66500651	66504094	1000	-	.	source_transcript=ENST00000850694.1;source_transcript_name=ENST00000850694;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850694.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850694.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001616;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_G0000560;transcript_name=HG00140_ch_T0001616;gene_name=ENSG00000310542;ID=HG00140_ch_T0001616;Name=ENSG00000310542
HG00140_chrY	CAT	exon	66500651	66501593	.	-	.	source_transcript=ENST00000850694.1;source_transcript_name=ENST00000850694;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850694.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850694.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001616;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001616;transcript_name=HG00140_ch_T0001616;gene_name=ENSG00000310542;ID=exon:HG00140_ch_T0001616:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66501594	66502348	.	-	.	source_transcript=ENST00000850694.1;source_transcript_name=ENST00000850694;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850694.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850694.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001616;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001616;transcript_name=HG00140_ch_T0001616;gene_name=ENSG00000310542;ID=intron:HG00140_ch_T0001616:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66502349	66502433	.	-	.	source_transcript=ENST00000850694.1;source_transcript_name=ENST00000850694;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850694.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850694.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001616;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001616;transcript_name=HG00140_ch_T0001616;gene_name=ENSG00000310542;ID=exon:HG00140_ch_T0001616:1;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66502434	66502818	.	-	.	source_transcript=ENST00000850694.1;source_transcript_name=ENST00000850694;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850694.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850694.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001616;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001616;transcript_name=HG00140_ch_T0001616;gene_name=ENSG00000310542;ID=intron:HG00140_ch_T0001616:1;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66502819	66503036	.	-	.	source_transcript=ENST00000850694.1;source_transcript_name=ENST00000850694;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850694.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850694.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001616;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001616;transcript_name=HG00140_ch_T0001616;gene_name=ENSG00000310542;ID=exon:HG00140_ch_T0001616:2;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66503037	66504017	.	-	.	source_transcript=ENST00000850694.1;source_transcript_name=ENST00000850694;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850694.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850694.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001616;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001616;transcript_name=HG00140_ch_T0001616;gene_name=ENSG00000310542;ID=intron:HG00140_ch_T0001616:2;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66504018	66504094	.	-	.	source_transcript=ENST00000850694.1;source_transcript_name=ENST00000850694;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850694.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850694.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001616;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001616;transcript_name=HG00140_ch_T0001616;gene_name=ENSG00000310542;ID=exon:HG00140_ch_T0001616:3;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	66500652	66503937	1000	-	.	source_transcript=ENST00000850698.1;source_transcript_name=ENST00000850698;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850698.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850698.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001617;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_G0000560;transcript_name=HG00140_ch_T0001617;gene_name=ENSG00000310542;ID=HG00140_ch_T0001617;Name=ENSG00000310542
HG00140_chrY	CAT	exon	66500652	66501481	.	-	.	source_transcript=ENST00000850698.1;source_transcript_name=ENST00000850698;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850698.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850698.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001617;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001617;transcript_name=HG00140_ch_T0001617;gene_name=ENSG00000310542;ID=exon:HG00140_ch_T0001617:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66501482	66502348	.	-	.	source_transcript=ENST00000850698.1;source_transcript_name=ENST00000850698;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850698.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850698.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001617;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001617;transcript_name=HG00140_ch_T0001617;gene_name=ENSG00000310542;ID=intron:HG00140_ch_T0001617:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66502349	66502433	.	-	.	source_transcript=ENST00000850698.1;source_transcript_name=ENST00000850698;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850698.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850698.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001617;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001617;transcript_name=HG00140_ch_T0001617;gene_name=ENSG00000310542;ID=exon:HG00140_ch_T0001617:1;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66502434	66502818	.	-	.	source_transcript=ENST00000850698.1;source_transcript_name=ENST00000850698;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850698.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850698.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001617;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001617;transcript_name=HG00140_ch_T0001617;gene_name=ENSG00000310542;ID=intron:HG00140_ch_T0001617:1;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66502819	66503036	.	-	.	source_transcript=ENST00000850698.1;source_transcript_name=ENST00000850698;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850698.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850698.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001617;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001617;transcript_name=HG00140_ch_T0001617;gene_name=ENSG00000310542;ID=exon:HG00140_ch_T0001617:2;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66503037	66503829	.	-	.	source_transcript=ENST00000850698.1;source_transcript_name=ENST00000850698;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850698.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850698.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001617;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001617;transcript_name=HG00140_ch_T0001617;gene_name=ENSG00000310542;ID=intron:HG00140_ch_T0001617:2;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66503830	66503937	.	-	.	source_transcript=ENST00000850698.1;source_transcript_name=ENST00000850698;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850698.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850698.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001617;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001617;transcript_name=HG00140_ch_T0001617;gene_name=ENSG00000310542;ID=exon:HG00140_ch_T0001617:3;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	66501391	66504048	1000	-	.	source_transcript=ENST00000850700.1;source_transcript_name=ENST00000850700;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850700.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001619;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_G0000560;transcript_name=HG00140_ch_T0001619;gene_name=ENSG00000310542;ID=HG00140_ch_T0001619;Name=ENSG00000310542
HG00140_chrY	CAT	exon	66501391	66501593	.	-	.	source_transcript=ENST00000850700.1;source_transcript_name=ENST00000850700;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850700.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001619;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001619;transcript_name=HG00140_ch_T0001619;gene_name=ENSG00000310542;ID=exon:HG00140_ch_T0001619:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66501594	66502348	.	-	.	source_transcript=ENST00000850700.1;source_transcript_name=ENST00000850700;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850700.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001619;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001619;transcript_name=HG00140_ch_T0001619;gene_name=ENSG00000310542;ID=intron:HG00140_ch_T0001619:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66502349	66502433	.	-	.	source_transcript=ENST00000850700.1;source_transcript_name=ENST00000850700;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850700.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001619;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001619;transcript_name=HG00140_ch_T0001619;gene_name=ENSG00000310542;ID=exon:HG00140_ch_T0001619:1;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66502434	66502818	.	-	.	source_transcript=ENST00000850700.1;source_transcript_name=ENST00000850700;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850700.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001619;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001619;transcript_name=HG00140_ch_T0001619;gene_name=ENSG00000310542;ID=intron:HG00140_ch_T0001619:1;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66502819	66503036	.	-	.	source_transcript=ENST00000850700.1;source_transcript_name=ENST00000850700;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850700.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001619;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001619;transcript_name=HG00140_ch_T0001619;gene_name=ENSG00000310542;ID=exon:HG00140_ch_T0001619:2;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66503037	66503829	.	-	.	source_transcript=ENST00000850700.1;source_transcript_name=ENST00000850700;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850700.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001619;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001619;transcript_name=HG00140_ch_T0001619;gene_name=ENSG00000310542;ID=intron:HG00140_ch_T0001619:2;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66503830	66504048	.	-	.	source_transcript=ENST00000850700.1;source_transcript_name=ENST00000850700;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850700.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850700.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001619;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001619;transcript_name=HG00140_ch_T0001619;gene_name=ENSG00000310542;ID=exon:HG00140_ch_T0001619:3;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	transcript	66502375	66503199	1000	-	.	source_transcript=ENST00000850701.1;source_transcript_name=ENST00000850701;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850701.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850701.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001620;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_G0000560;transcript_name=HG00140_ch_T0001620;gene_name=ENSG00000310542;ID=HG00140_ch_T0001620;Name=ENSG00000310542
HG00140_chrY	CAT	exon	66502375	66502433	.	-	.	source_transcript=ENST00000850701.1;source_transcript_name=ENST00000850701;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850701.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850701.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001620;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001620;transcript_name=HG00140_ch_T0001620;gene_name=ENSG00000310542;ID=exon:HG00140_ch_T0001620:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66502434	66502818	.	-	.	source_transcript=ENST00000850701.1;source_transcript_name=ENST00000850701;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850701.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850701.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001620;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001620;transcript_name=HG00140_ch_T0001620;gene_name=ENSG00000310542;ID=intron:HG00140_ch_T0001620:0;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66502819	66503199	.	-	.	source_transcript=ENST00000850701.1;source_transcript_name=ENST00000850701;source_gene=ENSG00000310542.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310542.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000850701.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000850701.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310542;transcript_id=HG00140_ch_T0001620;gene_id=HG00140_ch_G0000560;Parent=HG00140_ch_T0001620;transcript_name=HG00140_ch_T0001620;gene_name=ENSG00000310542;ID=exon:HG00140_ch_T0001620:1;Name=ENSG00000310542;rna_support=False;reference_support=False
HG00140_chrY	CAT	gene	66500652	66502866	.	-	.	source_gene_common_name=DDX11L16;source_gene=ENSG00000292371.1;gene_id=HG00140_ch_G0000561;gene_biotype=unprocessed_pseudogene;gene_name=DDX11L16;gene_sources=liftoff;ID=HG00140_ch_G0000561;Name=DDX11L16
HG00140_chrY	CAT	transcript	66500652	66502866	1000	-	.	source_transcript=ENST00000711270.1;source_transcript_name=DDX11L16-286;source_gene=ENSG00000292371.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292371.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711270.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711270.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX11L16;transcript_id=HG00140_ch_T0001618;gene_id=HG00140_ch_G0000561;Parent=HG00140_ch_G0000561;transcript_name=HG00140_ch_T0001618;gene_name=DDX11L16;ID=HG00140_ch_T0001618;Name=DDX11L16
HG00140_chrY	CAT	exon	66500652	66501593	.	-	.	source_transcript=ENST00000711270.1;source_transcript_name=DDX11L16-286;source_gene=ENSG00000292371.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292371.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711270.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711270.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX11L16;transcript_id=HG00140_ch_T0001618;gene_id=HG00140_ch_G0000561;Parent=HG00140_ch_T0001618;transcript_name=HG00140_ch_T0001618;gene_name=DDX11L16;ID=exon:HG00140_ch_T0001618:0;Name=DDX11L16;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66501594	66501671	.	-	.	source_transcript=ENST00000711270.1;source_transcript_name=DDX11L16-286;source_gene=ENSG00000292371.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292371.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711270.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711270.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX11L16;transcript_id=HG00140_ch_T0001618;gene_id=HG00140_ch_G0000561;Parent=HG00140_ch_T0001618;transcript_name=HG00140_ch_T0001618;gene_name=DDX11L16;ID=intron:HG00140_ch_T0001618:0;Name=DDX11L16;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66501672	66501825	.	-	.	source_transcript=ENST00000711270.1;source_transcript_name=DDX11L16-286;source_gene=ENSG00000292371.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292371.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711270.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711270.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX11L16;transcript_id=HG00140_ch_T0001618;gene_id=HG00140_ch_G0000561;Parent=HG00140_ch_T0001618;transcript_name=HG00140_ch_T0001618;gene_name=DDX11L16;ID=exon:HG00140_ch_T0001618:1;Name=DDX11L16;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66501826	66501993	.	-	.	source_transcript=ENST00000711270.1;source_transcript_name=DDX11L16-286;source_gene=ENSG00000292371.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292371.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711270.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711270.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX11L16;transcript_id=HG00140_ch_T0001618;gene_id=HG00140_ch_G0000561;Parent=HG00140_ch_T0001618;transcript_name=HG00140_ch_T0001618;gene_name=DDX11L16;ID=intron:HG00140_ch_T0001618:1;Name=DDX11L16;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66501994	66502071	.	-	.	source_transcript=ENST00000711270.1;source_transcript_name=DDX11L16-286;source_gene=ENSG00000292371.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292371.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711270.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711270.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX11L16;transcript_id=HG00140_ch_T0001618;gene_id=HG00140_ch_G0000561;Parent=HG00140_ch_T0001618;transcript_name=HG00140_ch_T0001618;gene_name=DDX11L16;ID=exon:HG00140_ch_T0001618:2;Name=DDX11L16;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66502072	66502348	.	-	.	source_transcript=ENST00000711270.1;source_transcript_name=DDX11L16-286;source_gene=ENSG00000292371.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292371.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711270.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711270.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX11L16;transcript_id=HG00140_ch_T0001618;gene_id=HG00140_ch_G0000561;Parent=HG00140_ch_T0001618;transcript_name=HG00140_ch_T0001618;gene_name=DDX11L16;ID=intron:HG00140_ch_T0001618:2;Name=DDX11L16;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66502349	66502433	.	-	.	source_transcript=ENST00000711270.1;source_transcript_name=DDX11L16-286;source_gene=ENSG00000292371.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292371.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711270.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711270.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX11L16;transcript_id=HG00140_ch_T0001618;gene_id=HG00140_ch_G0000561;Parent=HG00140_ch_T0001618;transcript_name=HG00140_ch_T0001618;gene_name=DDX11L16;ID=exon:HG00140_ch_T0001618:3;Name=DDX11L16;rna_support=False;reference_support=False
HG00140_chrY	CAT	intron	66502434	66502818	.	-	.	source_transcript=ENST00000711270.1;source_transcript_name=DDX11L16-286;source_gene=ENSG00000292371.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292371.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711270.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711270.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX11L16;transcript_id=HG00140_ch_T0001618;gene_id=HG00140_ch_G0000561;Parent=HG00140_ch_T0001618;transcript_name=HG00140_ch_T0001618;gene_name=DDX11L16;ID=intron:HG00140_ch_T0001618:3;Name=DDX11L16;rna_support=False;reference_support=False
HG00140_chrY	CAT	exon	66502819	66502866	.	-	.	source_transcript=ENST00000711270.1;source_transcript_name=DDX11L16-286;source_gene=ENSG00000292371.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000292371.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000711270.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000711270.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX11L16;transcript_id=HG00140_ch_T0001618;gene_id=HG00140_ch_G0000561;Parent=HG00140_ch_T0001618;transcript_name=HG00140_ch_T0001618;gene_name=DDX11L16;ID=exon:HG00140_ch_T0001618:4;Name=DDX11L16;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	5017	7260	.	+	.	source_gene_common_name=ENSG00000224917;source_gene=ENSG00000224917.1;gene_id=HG00140_ch_G0000562;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000224917;gene_sources=liftoff;ID=HG00140_ch_G0000562;Name=ENSG00000224917
HG00140_chrY_random0000005	CAT	transcript	5017	7260	1000	+	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;transcript_id=HG00140_ch_T0001621;gene_id=HG00140_ch_G0000562;Parent=HG00140_ch_G0000562;transcript_name=HG00140_ch_T0001621;gene_name=ENSG00000224917;ID=HG00140_ch_T0001621;Name=ENSG00000224917
HG00140_chrY_random0000005	CAT	exon	5017	5418	.	+	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;transcript_id=HG00140_ch_T0001621;gene_id=HG00140_ch_G0000562;Parent=HG00140_ch_T0001621;transcript_name=HG00140_ch_T0001621;gene_name=ENSG00000224917;ID=exon:HG00140_ch_T0001621:0;Name=ENSG00000224917;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	5419	6450	.	+	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;transcript_id=HG00140_ch_T0001621;gene_id=HG00140_ch_G0000562;Parent=HG00140_ch_T0001621;transcript_name=HG00140_ch_T0001621;gene_name=ENSG00000224917;ID=intron:HG00140_ch_T0001621:0;Name=ENSG00000224917;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	6451	6505	.	+	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;transcript_id=HG00140_ch_T0001621;gene_id=HG00140_ch_G0000562;Parent=HG00140_ch_T0001621;transcript_name=HG00140_ch_T0001621;gene_name=ENSG00000224917;ID=exon:HG00140_ch_T0001621:1;Name=ENSG00000224917;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	6506	6720	.	+	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;transcript_id=HG00140_ch_T0001621;gene_id=HG00140_ch_G0000562;Parent=HG00140_ch_T0001621;transcript_name=HG00140_ch_T0001621;gene_name=ENSG00000224917;ID=intron:HG00140_ch_T0001621:1;Name=ENSG00000224917;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	6721	6829	.	+	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;transcript_id=HG00140_ch_T0001621;gene_id=HG00140_ch_G0000562;Parent=HG00140_ch_T0001621;transcript_name=HG00140_ch_T0001621;gene_name=ENSG00000224917;ID=exon:HG00140_ch_T0001621:2;Name=ENSG00000224917;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	6830	7005	.	+	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;transcript_id=HG00140_ch_T0001621;gene_id=HG00140_ch_G0000562;Parent=HG00140_ch_T0001621;transcript_name=HG00140_ch_T0001621;gene_name=ENSG00000224917;ID=intron:HG00140_ch_T0001621:2;Name=ENSG00000224917;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	7006	7065	.	+	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;transcript_id=HG00140_ch_T0001621;gene_id=HG00140_ch_G0000562;Parent=HG00140_ch_T0001621;transcript_name=HG00140_ch_T0001621;gene_name=ENSG00000224917;ID=exon:HG00140_ch_T0001621:3;Name=ENSG00000224917;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	7066	7186	.	+	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;transcript_id=HG00140_ch_T0001621;gene_id=HG00140_ch_G0000562;Parent=HG00140_ch_T0001621;transcript_name=HG00140_ch_T0001621;gene_name=ENSG00000224917;ID=intron:HG00140_ch_T0001621:3;Name=ENSG00000224917;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	7187	7260	.	+	.	source_transcript=ENST00000434179.1;source_transcript_name=ENST00000434179;source_gene=ENSG00000224917.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224917.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000224917;transcript_id=HG00140_ch_T0001621;gene_id=HG00140_ch_G0000562;Parent=HG00140_ch_T0001621;transcript_name=HG00140_ch_T0001621;gene_name=ENSG00000224917;ID=exon:HG00140_ch_T0001621:4;Name=ENSG00000224917;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	19004	28638	.	-	.	source_gene_common_name=RBMY2CP;source_gene=ENSG00000215540.11;gene_id=HG00140_ch_G0000563;gene_biotype=transcribed_processed_pseudogene;gene_name=RBMY2CP;gene_sources=liftoff;ID=HG00140_ch_G0000563;Name=RBMY2CP
HG00140_chrY_random0000005	CAT	transcript	19004	28638	1000	-	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG00140_ch_T0001622;gene_id=HG00140_ch_G0000563;Parent=HG00140_ch_G0000563;transcript_name=HG00140_ch_T0001622;gene_name=RBMY2CP;ID=HG00140_ch_T0001622;Name=RBMY2CP
HG00140_chrY_random0000005	CAT	exon	19004	19302	.	-	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG00140_ch_T0001622;gene_id=HG00140_ch_G0000563;Parent=HG00140_ch_T0001622;transcript_name=HG00140_ch_T0001622;gene_name=RBMY2CP;ID=exon:HG00140_ch_T0001622:0;Name=RBMY2CP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	19303	19726	.	-	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG00140_ch_T0001622;gene_id=HG00140_ch_G0000563;Parent=HG00140_ch_T0001622;transcript_name=HG00140_ch_T0001622;gene_name=RBMY2CP;ID=intron:HG00140_ch_T0001622:0;Name=RBMY2CP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	19727	19814	.	-	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG00140_ch_T0001622;gene_id=HG00140_ch_G0000563;Parent=HG00140_ch_T0001622;transcript_name=HG00140_ch_T0001622;gene_name=RBMY2CP;ID=exon:HG00140_ch_T0001622:1;Name=RBMY2CP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	19815	19896	.	-	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG00140_ch_T0001622;gene_id=HG00140_ch_G0000563;Parent=HG00140_ch_T0001622;transcript_name=HG00140_ch_T0001622;gene_name=RBMY2CP;ID=intron:HG00140_ch_T0001622:1;Name=RBMY2CP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	19897	20007	.	-	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG00140_ch_T0001622;gene_id=HG00140_ch_G0000563;Parent=HG00140_ch_T0001622;transcript_name=HG00140_ch_T0001622;gene_name=RBMY2CP;ID=exon:HG00140_ch_T0001622:2;Name=RBMY2CP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	20008	20876	.	-	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG00140_ch_T0001622;gene_id=HG00140_ch_G0000563;Parent=HG00140_ch_T0001622;transcript_name=HG00140_ch_T0001622;gene_name=RBMY2CP;ID=intron:HG00140_ch_T0001622:2;Name=RBMY2CP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	20877	20991	.	-	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG00140_ch_T0001622;gene_id=HG00140_ch_G0000563;Parent=HG00140_ch_T0001622;transcript_name=HG00140_ch_T0001622;gene_name=RBMY2CP;ID=exon:HG00140_ch_T0001622:3;Name=RBMY2CP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	20992	22998	.	-	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG00140_ch_T0001622;gene_id=HG00140_ch_G0000563;Parent=HG00140_ch_T0001622;transcript_name=HG00140_ch_T0001622;gene_name=RBMY2CP;ID=intron:HG00140_ch_T0001622:3;Name=RBMY2CP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	22999	23151	.	-	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG00140_ch_T0001622;gene_id=HG00140_ch_G0000563;Parent=HG00140_ch_T0001622;transcript_name=HG00140_ch_T0001622;gene_name=RBMY2CP;ID=exon:HG00140_ch_T0001622:4;Name=RBMY2CP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	23152	25086	.	-	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG00140_ch_T0001622;gene_id=HG00140_ch_G0000563;Parent=HG00140_ch_T0001622;transcript_name=HG00140_ch_T0001622;gene_name=RBMY2CP;ID=intron:HG00140_ch_T0001622:4;Name=RBMY2CP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	25087	25264	.	-	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG00140_ch_T0001622;gene_id=HG00140_ch_G0000563;Parent=HG00140_ch_T0001622;transcript_name=HG00140_ch_T0001622;gene_name=RBMY2CP;ID=exon:HG00140_ch_T0001622:5;Name=RBMY2CP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	25265	27972	.	-	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG00140_ch_T0001622;gene_id=HG00140_ch_G0000563;Parent=HG00140_ch_T0001622;transcript_name=HG00140_ch_T0001622;gene_name=RBMY2CP;ID=intron:HG00140_ch_T0001622:5;Name=RBMY2CP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	27973	28076	.	-	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG00140_ch_T0001622;gene_id=HG00140_ch_G0000563;Parent=HG00140_ch_T0001622;transcript_name=HG00140_ch_T0001622;gene_name=RBMY2CP;ID=exon:HG00140_ch_T0001622:6;Name=RBMY2CP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	28077	28529	.	-	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG00140_ch_T0001622;gene_id=HG00140_ch_G0000563;Parent=HG00140_ch_T0001622;transcript_name=HG00140_ch_T0001622;gene_name=RBMY2CP;ID=intron:HG00140_ch_T0001622:6;Name=RBMY2CP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	28530	28638	.	-	.	source_transcript=ENST00000448575.5;source_transcript_name=RBMY2CP-201;source_gene=ENSG00000215540.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215540.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448575.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448575.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2CP;transcript_id=HG00140_ch_T0001622;gene_id=HG00140_ch_G0000563;Parent=HG00140_ch_T0001622;transcript_name=HG00140_ch_T0001622;gene_name=RBMY2CP;ID=exon:HG00140_ch_T0001622:7;Name=RBMY2CP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	20794	30641	.	-	.	source_gene_common_name=ENSG00000293249;source_gene=ENSG00000293249.2;alternative_source_transcripts=ENST00000458444.2;gene_id=HG00140_ch_G0000564;gene_biotype=lncRNA;gene_name=ENSG00000293249;gene_sources=liftoff;ID=HG00140_ch_G0000564;Name=ENSG00000293249
HG00140_chrY_random0000005	CAT	transcript	20794	30641	1000	-	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;alternative_source_transcripts=ENST00000458444.2;transcript_id=HG00140_ch_T0001623;gene_id=HG00140_ch_G0000564;Parent=HG00140_ch_G0000564;transcript_name=HG00140_ch_T0001623;gene_name=ENSG00000293249;ID=HG00140_ch_T0001623;Name=ENSG00000293249
HG00140_chrY_random0000005	CAT	exon	20794	20991	.	-	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;alternative_source_transcripts=ENST00000458444.2;transcript_id=HG00140_ch_T0001623;gene_id=HG00140_ch_G0000564;Parent=HG00140_ch_T0001623;transcript_name=HG00140_ch_T0001623;gene_name=ENSG00000293249;ID=exon:HG00140_ch_T0001623:0;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	20992	22998	.	-	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;alternative_source_transcripts=ENST00000458444.2;transcript_id=HG00140_ch_T0001623;gene_id=HG00140_ch_G0000564;Parent=HG00140_ch_T0001623;transcript_name=HG00140_ch_T0001623;gene_name=ENSG00000293249;ID=intron:HG00140_ch_T0001623:0;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	22999	23151	.	-	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;alternative_source_transcripts=ENST00000458444.2;transcript_id=HG00140_ch_T0001623;gene_id=HG00140_ch_G0000564;Parent=HG00140_ch_T0001623;transcript_name=HG00140_ch_T0001623;gene_name=ENSG00000293249;ID=exon:HG00140_ch_T0001623:1;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	23152	25086	.	-	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;alternative_source_transcripts=ENST00000458444.2;transcript_id=HG00140_ch_T0001623;gene_id=HG00140_ch_G0000564;Parent=HG00140_ch_T0001623;transcript_name=HG00140_ch_T0001623;gene_name=ENSG00000293249;ID=intron:HG00140_ch_T0001623:1;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	25087	25264	.	-	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;alternative_source_transcripts=ENST00000458444.2;transcript_id=HG00140_ch_T0001623;gene_id=HG00140_ch_G0000564;Parent=HG00140_ch_T0001623;transcript_name=HG00140_ch_T0001623;gene_name=ENSG00000293249;ID=exon:HG00140_ch_T0001623:2;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	25265	27972	.	-	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;alternative_source_transcripts=ENST00000458444.2;transcript_id=HG00140_ch_T0001623;gene_id=HG00140_ch_G0000564;Parent=HG00140_ch_T0001623;transcript_name=HG00140_ch_T0001623;gene_name=ENSG00000293249;ID=intron:HG00140_ch_T0001623:2;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	27973	28076	.	-	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;alternative_source_transcripts=ENST00000458444.2;transcript_id=HG00140_ch_T0001623;gene_id=HG00140_ch_G0000564;Parent=HG00140_ch_T0001623;transcript_name=HG00140_ch_T0001623;gene_name=ENSG00000293249;ID=exon:HG00140_ch_T0001623:3;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	28077	28529	.	-	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;alternative_source_transcripts=ENST00000458444.2;transcript_id=HG00140_ch_T0001623;gene_id=HG00140_ch_G0000564;Parent=HG00140_ch_T0001623;transcript_name=HG00140_ch_T0001623;gene_name=ENSG00000293249;ID=intron:HG00140_ch_T0001623:3;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	28530	28642	.	-	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;alternative_source_transcripts=ENST00000458444.2;transcript_id=HG00140_ch_T0001623;gene_id=HG00140_ch_G0000564;Parent=HG00140_ch_T0001623;transcript_name=HG00140_ch_T0001623;gene_name=ENSG00000293249;ID=exon:HG00140_ch_T0001623:4;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	28643	29657	.	-	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;alternative_source_transcripts=ENST00000458444.2;transcript_id=HG00140_ch_T0001623;gene_id=HG00140_ch_G0000564;Parent=HG00140_ch_T0001623;transcript_name=HG00140_ch_T0001623;gene_name=ENSG00000293249;ID=intron:HG00140_ch_T0001623:4;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	29658	29737	.	-	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;alternative_source_transcripts=ENST00000458444.2;transcript_id=HG00140_ch_T0001623;gene_id=HG00140_ch_G0000564;Parent=HG00140_ch_T0001623;transcript_name=HG00140_ch_T0001623;gene_name=ENSG00000293249;ID=exon:HG00140_ch_T0001623:5;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	29738	30491	.	-	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;alternative_source_transcripts=ENST00000458444.2;transcript_id=HG00140_ch_T0001623;gene_id=HG00140_ch_G0000564;Parent=HG00140_ch_T0001623;transcript_name=HG00140_ch_T0001623;gene_name=ENSG00000293249;ID=intron:HG00140_ch_T0001623:5;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	30492	30641	.	-	.	source_transcript=ENST00000458444.2;source_transcript_name=ENST00000458444;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000458444.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000458444.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;alternative_source_transcripts=ENST00000458444.2;transcript_id=HG00140_ch_T0001623;gene_id=HG00140_ch_G0000564;Parent=HG00140_ch_T0001623;transcript_name=HG00140_ch_T0001623;gene_name=ENSG00000293249;ID=exon:HG00140_ch_T0001623:6;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	22161	30622	1000	-	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;alternative_source_transcripts=ENST00000812118.1;transcript_id=HG00140_ch_T0001624;gene_id=HG00140_ch_G0000564;Parent=HG00140_ch_G0000564;transcript_name=HG00140_ch_T0001624;gene_name=ENSG00000293249;ID=HG00140_ch_T0001624;Name=ENSG00000293249
HG00140_chrY_random0000005	CAT	exon	22161	22420	.	-	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;alternative_source_transcripts=ENST00000812118.1;transcript_id=HG00140_ch_T0001624;gene_id=HG00140_ch_G0000564;Parent=HG00140_ch_T0001624;transcript_name=HG00140_ch_T0001624;gene_name=ENSG00000293249;ID=exon:HG00140_ch_T0001624:0;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	22421	22998	.	-	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;alternative_source_transcripts=ENST00000812118.1;transcript_id=HG00140_ch_T0001624;gene_id=HG00140_ch_G0000564;Parent=HG00140_ch_T0001624;transcript_name=HG00140_ch_T0001624;gene_name=ENSG00000293249;ID=intron:HG00140_ch_T0001624:0;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	22999	23151	.	-	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;alternative_source_transcripts=ENST00000812118.1;transcript_id=HG00140_ch_T0001624;gene_id=HG00140_ch_G0000564;Parent=HG00140_ch_T0001624;transcript_name=HG00140_ch_T0001624;gene_name=ENSG00000293249;ID=exon:HG00140_ch_T0001624:1;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	23152	25086	.	-	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;alternative_source_transcripts=ENST00000812118.1;transcript_id=HG00140_ch_T0001624;gene_id=HG00140_ch_G0000564;Parent=HG00140_ch_T0001624;transcript_name=HG00140_ch_T0001624;gene_name=ENSG00000293249;ID=intron:HG00140_ch_T0001624:1;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	25087	25264	.	-	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;alternative_source_transcripts=ENST00000812118.1;transcript_id=HG00140_ch_T0001624;gene_id=HG00140_ch_G0000564;Parent=HG00140_ch_T0001624;transcript_name=HG00140_ch_T0001624;gene_name=ENSG00000293249;ID=exon:HG00140_ch_T0001624:2;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	25265	27972	.	-	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;alternative_source_transcripts=ENST00000812118.1;transcript_id=HG00140_ch_T0001624;gene_id=HG00140_ch_G0000564;Parent=HG00140_ch_T0001624;transcript_name=HG00140_ch_T0001624;gene_name=ENSG00000293249;ID=intron:HG00140_ch_T0001624:2;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	27973	28076	.	-	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;alternative_source_transcripts=ENST00000812118.1;transcript_id=HG00140_ch_T0001624;gene_id=HG00140_ch_G0000564;Parent=HG00140_ch_T0001624;transcript_name=HG00140_ch_T0001624;gene_name=ENSG00000293249;ID=exon:HG00140_ch_T0001624:3;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	28077	28529	.	-	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;alternative_source_transcripts=ENST00000812118.1;transcript_id=HG00140_ch_T0001624;gene_id=HG00140_ch_G0000564;Parent=HG00140_ch_T0001624;transcript_name=HG00140_ch_T0001624;gene_name=ENSG00000293249;ID=intron:HG00140_ch_T0001624:3;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	28530	28642	.	-	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;alternative_source_transcripts=ENST00000812118.1;transcript_id=HG00140_ch_T0001624;gene_id=HG00140_ch_G0000564;Parent=HG00140_ch_T0001624;transcript_name=HG00140_ch_T0001624;gene_name=ENSG00000293249;ID=exon:HG00140_ch_T0001624:4;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	28643	29657	.	-	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;alternative_source_transcripts=ENST00000812118.1;transcript_id=HG00140_ch_T0001624;gene_id=HG00140_ch_G0000564;Parent=HG00140_ch_T0001624;transcript_name=HG00140_ch_T0001624;gene_name=ENSG00000293249;ID=intron:HG00140_ch_T0001624:4;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	29658	29737	.	-	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;alternative_source_transcripts=ENST00000812118.1;transcript_id=HG00140_ch_T0001624;gene_id=HG00140_ch_G0000564;Parent=HG00140_ch_T0001624;transcript_name=HG00140_ch_T0001624;gene_name=ENSG00000293249;ID=exon:HG00140_ch_T0001624:5;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	29738	30491	.	-	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;alternative_source_transcripts=ENST00000812118.1;transcript_id=HG00140_ch_T0001624;gene_id=HG00140_ch_G0000564;Parent=HG00140_ch_T0001624;transcript_name=HG00140_ch_T0001624;gene_name=ENSG00000293249;ID=intron:HG00140_ch_T0001624:5;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	30492	30622	.	-	.	source_transcript=ENST00000812118.1;source_transcript_name=ENST00000812118;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812118.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812118.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;alternative_source_transcripts=ENST00000812118.1;transcript_id=HG00140_ch_T0001624;gene_id=HG00140_ch_G0000564;Parent=HG00140_ch_T0001624;transcript_name=HG00140_ch_T0001624;gene_name=ENSG00000293249;ID=exon:HG00140_ch_T0001624:6;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	22161	30613	1000	-	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;alternative_source_transcripts=ENST00000812119.1;transcript_id=HG00140_ch_T0001625;gene_id=HG00140_ch_G0000564;Parent=HG00140_ch_G0000564;transcript_name=HG00140_ch_T0001625;gene_name=ENSG00000293249;ID=HG00140_ch_T0001625;Name=ENSG00000293249
HG00140_chrY_random0000005	CAT	exon	22161	22420	.	-	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;alternative_source_transcripts=ENST00000812119.1;transcript_id=HG00140_ch_T0001625;gene_id=HG00140_ch_G0000564;Parent=HG00140_ch_T0001625;transcript_name=HG00140_ch_T0001625;gene_name=ENSG00000293249;ID=exon:HG00140_ch_T0001625:0;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	22421	22998	.	-	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;alternative_source_transcripts=ENST00000812119.1;transcript_id=HG00140_ch_T0001625;gene_id=HG00140_ch_G0000564;Parent=HG00140_ch_T0001625;transcript_name=HG00140_ch_T0001625;gene_name=ENSG00000293249;ID=intron:HG00140_ch_T0001625:0;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	22999	23151	.	-	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;alternative_source_transcripts=ENST00000812119.1;transcript_id=HG00140_ch_T0001625;gene_id=HG00140_ch_G0000564;Parent=HG00140_ch_T0001625;transcript_name=HG00140_ch_T0001625;gene_name=ENSG00000293249;ID=exon:HG00140_ch_T0001625:1;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	23152	25086	.	-	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;alternative_source_transcripts=ENST00000812119.1;transcript_id=HG00140_ch_T0001625;gene_id=HG00140_ch_G0000564;Parent=HG00140_ch_T0001625;transcript_name=HG00140_ch_T0001625;gene_name=ENSG00000293249;ID=intron:HG00140_ch_T0001625:1;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	25087	25264	.	-	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;alternative_source_transcripts=ENST00000812119.1;transcript_id=HG00140_ch_T0001625;gene_id=HG00140_ch_G0000564;Parent=HG00140_ch_T0001625;transcript_name=HG00140_ch_T0001625;gene_name=ENSG00000293249;ID=exon:HG00140_ch_T0001625:2;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	25265	27972	.	-	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;alternative_source_transcripts=ENST00000812119.1;transcript_id=HG00140_ch_T0001625;gene_id=HG00140_ch_G0000564;Parent=HG00140_ch_T0001625;transcript_name=HG00140_ch_T0001625;gene_name=ENSG00000293249;ID=intron:HG00140_ch_T0001625:2;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	27973	28076	.	-	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;alternative_source_transcripts=ENST00000812119.1;transcript_id=HG00140_ch_T0001625;gene_id=HG00140_ch_G0000564;Parent=HG00140_ch_T0001625;transcript_name=HG00140_ch_T0001625;gene_name=ENSG00000293249;ID=exon:HG00140_ch_T0001625:3;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	28077	28529	.	-	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;alternative_source_transcripts=ENST00000812119.1;transcript_id=HG00140_ch_T0001625;gene_id=HG00140_ch_G0000564;Parent=HG00140_ch_T0001625;transcript_name=HG00140_ch_T0001625;gene_name=ENSG00000293249;ID=intron:HG00140_ch_T0001625:3;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	28530	28642	.	-	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;alternative_source_transcripts=ENST00000812119.1;transcript_id=HG00140_ch_T0001625;gene_id=HG00140_ch_G0000564;Parent=HG00140_ch_T0001625;transcript_name=HG00140_ch_T0001625;gene_name=ENSG00000293249;ID=exon:HG00140_ch_T0001625:4;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	28643	29657	.	-	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;alternative_source_transcripts=ENST00000812119.1;transcript_id=HG00140_ch_T0001625;gene_id=HG00140_ch_G0000564;Parent=HG00140_ch_T0001625;transcript_name=HG00140_ch_T0001625;gene_name=ENSG00000293249;ID=intron:HG00140_ch_T0001625:4;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	29658	29840	.	-	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;alternative_source_transcripts=ENST00000812119.1;transcript_id=HG00140_ch_T0001625;gene_id=HG00140_ch_G0000564;Parent=HG00140_ch_T0001625;transcript_name=HG00140_ch_T0001625;gene_name=ENSG00000293249;ID=exon:HG00140_ch_T0001625:5;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	29841	30491	.	-	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;alternative_source_transcripts=ENST00000812119.1;transcript_id=HG00140_ch_T0001625;gene_id=HG00140_ch_G0000564;Parent=HG00140_ch_T0001625;transcript_name=HG00140_ch_T0001625;gene_name=ENSG00000293249;ID=intron:HG00140_ch_T0001625:5;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	30492	30613	.	-	.	source_transcript=ENST00000812119.1;source_transcript_name=ENST00000812119;source_gene=ENSG00000293249.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293249.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812119.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812119.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293249;alternative_source_transcripts=ENST00000812119.1;transcript_id=HG00140_ch_T0001625;gene_id=HG00140_ch_G0000564;Parent=HG00140_ch_T0001625;transcript_name=HG00140_ch_T0001625;gene_name=ENSG00000293249;ID=exon:HG00140_ch_T0001625:6;Name=ENSG00000293249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	31506	33082	.	+	.	source_gene_common_name=ENSG00000236647;source_gene=ENSG00000236647.1;alternative_source_transcripts=ENST00000444014.1,ENST00000444014.1;gene_id=HG00140_ch_G0000565;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000236647;gene_sources=liftoff;ID=HG00140_ch_G0000565;Name=ENSG00000236647
HG00140_chrY_random0000005	CAT	transcript	31506	33082	1000	+	.	source_transcript=ENST00000444014.1;source_transcript_name=ENST00000444014;source_gene=ENSG00000236647.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236647.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444014.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236647;alternative_source_transcripts=ENST00000444014.1,ENST00000444014.1;transcript_id=HG00140_ch_T0001626;gene_id=HG00140_ch_G0000565;Parent=HG00140_ch_G0000565;transcript_name=HG00140_ch_T0001626;gene_name=ENSG00000236647;ID=HG00140_ch_T0001626;Name=ENSG00000236647
HG00140_chrY_random0000005	CAT	exon	31506	31847	.	+	.	source_transcript=ENST00000444014.1;source_transcript_name=ENST00000444014;source_gene=ENSG00000236647.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236647.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236647;alternative_source_transcripts=ENST00000444014.1,ENST00000444014.1;transcript_id=HG00140_ch_T0001626;gene_id=HG00140_ch_G0000565;Parent=HG00140_ch_T0001626;transcript_name=HG00140_ch_T0001626;gene_name=ENSG00000236647;ID=exon:HG00140_ch_T0001626:0;Name=ENSG00000236647;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	31848	32311	.	+	.	source_transcript=ENST00000444014.1;source_transcript_name=ENST00000444014;source_gene=ENSG00000236647.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236647.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236647;alternative_source_transcripts=ENST00000444014.1,ENST00000444014.1;transcript_id=HG00140_ch_T0001626;gene_id=HG00140_ch_G0000565;Parent=HG00140_ch_T0001626;transcript_name=HG00140_ch_T0001626;gene_name=ENSG00000236647;ID=intron:HG00140_ch_T0001626:0;Name=ENSG00000236647;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	32312	32350	.	+	.	source_transcript=ENST00000444014.1;source_transcript_name=ENST00000444014;source_gene=ENSG00000236647.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236647.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236647;alternative_source_transcripts=ENST00000444014.1,ENST00000444014.1;transcript_id=HG00140_ch_T0001626;gene_id=HG00140_ch_G0000565;Parent=HG00140_ch_T0001626;transcript_name=HG00140_ch_T0001626;gene_name=ENSG00000236647;ID=exon:HG00140_ch_T0001626:1;Name=ENSG00000236647;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	32351	32579	.	+	.	source_transcript=ENST00000444014.1;source_transcript_name=ENST00000444014;source_gene=ENSG00000236647.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236647.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236647;alternative_source_transcripts=ENST00000444014.1,ENST00000444014.1;transcript_id=HG00140_ch_T0001626;gene_id=HG00140_ch_G0000565;Parent=HG00140_ch_T0001626;transcript_name=HG00140_ch_T0001626;gene_name=ENSG00000236647;ID=intron:HG00140_ch_T0001626:1;Name=ENSG00000236647;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	32580	32654	.	+	.	source_transcript=ENST00000444014.1;source_transcript_name=ENST00000444014;source_gene=ENSG00000236647.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236647.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236647;alternative_source_transcripts=ENST00000444014.1,ENST00000444014.1;transcript_id=HG00140_ch_T0001626;gene_id=HG00140_ch_G0000565;Parent=HG00140_ch_T0001626;transcript_name=HG00140_ch_T0001626;gene_name=ENSG00000236647;ID=exon:HG00140_ch_T0001626:2;Name=ENSG00000236647;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	32655	32749	.	+	.	source_transcript=ENST00000444014.1;source_transcript_name=ENST00000444014;source_gene=ENSG00000236647.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236647.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236647;alternative_source_transcripts=ENST00000444014.1,ENST00000444014.1;transcript_id=HG00140_ch_T0001626;gene_id=HG00140_ch_G0000565;Parent=HG00140_ch_T0001626;transcript_name=HG00140_ch_T0001626;gene_name=ENSG00000236647;ID=intron:HG00140_ch_T0001626:2;Name=ENSG00000236647;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	32750	32889	.	+	.	source_transcript=ENST00000444014.1;source_transcript_name=ENST00000444014;source_gene=ENSG00000236647.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236647.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236647;alternative_source_transcripts=ENST00000444014.1,ENST00000444014.1;transcript_id=HG00140_ch_T0001626;gene_id=HG00140_ch_G0000565;Parent=HG00140_ch_T0001626;transcript_name=HG00140_ch_T0001626;gene_name=ENSG00000236647;ID=exon:HG00140_ch_T0001626:3;Name=ENSG00000236647;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	32890	33006	.	+	.	source_transcript=ENST00000444014.1;source_transcript_name=ENST00000444014;source_gene=ENSG00000236647.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236647.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236647;alternative_source_transcripts=ENST00000444014.1,ENST00000444014.1;transcript_id=HG00140_ch_T0001626;gene_id=HG00140_ch_G0000565;Parent=HG00140_ch_T0001626;transcript_name=HG00140_ch_T0001626;gene_name=ENSG00000236647;ID=intron:HG00140_ch_T0001626:3;Name=ENSG00000236647;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	33007	33082	.	+	.	source_transcript=ENST00000444014.1;source_transcript_name=ENST00000444014;source_gene=ENSG00000236647.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236647.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444014.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444014.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000236647;alternative_source_transcripts=ENST00000444014.1,ENST00000444014.1;transcript_id=HG00140_ch_T0001626;gene_id=HG00140_ch_G0000565;Parent=HG00140_ch_T0001626;transcript_name=HG00140_ch_T0001626;gene_name=ENSG00000236647;ID=exon:HG00140_ch_T0001626:4;Name=ENSG00000236647;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	36856	42312	.	-	.	source_gene_common_name=ENSG00000305658;source_gene=ENSG00000305658.1;gene_id=HG00140_ch_G0000566;gene_biotype=lncRNA;gene_name=ENSG00000305658;gene_sources=liftoff;ID=HG00140_ch_G0000566;Name=ENSG00000305658
HG00140_chrY_random0000005	CAT	transcript	36856	42312	1000	-	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;transcript_id=HG00140_ch_T0001627;gene_id=HG00140_ch_G0000566;Parent=HG00140_ch_G0000566;transcript_name=HG00140_ch_T0001627;gene_name=ENSG00000305658;ID=HG00140_ch_T0001627;Name=ENSG00000305658
HG00140_chrY_random0000005	CAT	exon	36856	37561	.	-	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;transcript_id=HG00140_ch_T0001627;gene_id=HG00140_ch_G0000566;Parent=HG00140_ch_T0001627;transcript_name=HG00140_ch_T0001627;gene_name=ENSG00000305658;ID=exon:HG00140_ch_T0001627:0;Name=ENSG00000305658;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	37562	37925	.	-	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;transcript_id=HG00140_ch_T0001627;gene_id=HG00140_ch_G0000566;Parent=HG00140_ch_T0001627;transcript_name=HG00140_ch_T0001627;gene_name=ENSG00000305658;ID=intron:HG00140_ch_T0001627:0;Name=ENSG00000305658;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	37926	38052	.	-	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;transcript_id=HG00140_ch_T0001627;gene_id=HG00140_ch_G0000566;Parent=HG00140_ch_T0001627;transcript_name=HG00140_ch_T0001627;gene_name=ENSG00000305658;ID=exon:HG00140_ch_T0001627:1;Name=ENSG00000305658;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	38053	39921	.	-	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;transcript_id=HG00140_ch_T0001627;gene_id=HG00140_ch_G0000566;Parent=HG00140_ch_T0001627;transcript_name=HG00140_ch_T0001627;gene_name=ENSG00000305658;ID=intron:HG00140_ch_T0001627:1;Name=ENSG00000305658;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	39922	40055	.	-	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;transcript_id=HG00140_ch_T0001627;gene_id=HG00140_ch_G0000566;Parent=HG00140_ch_T0001627;transcript_name=HG00140_ch_T0001627;gene_name=ENSG00000305658;ID=exon:HG00140_ch_T0001627:2;Name=ENSG00000305658;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	40056	41973	.	-	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;transcript_id=HG00140_ch_T0001627;gene_id=HG00140_ch_G0000566;Parent=HG00140_ch_T0001627;transcript_name=HG00140_ch_T0001627;gene_name=ENSG00000305658;ID=intron:HG00140_ch_T0001627:2;Name=ENSG00000305658;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	41974	42312	.	-	.	source_transcript=ENST00000812264.1;source_transcript_name=ENST00000812264;source_gene=ENSG00000305658.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000305658.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000812264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000812264.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000305658;transcript_id=HG00140_ch_T0001627;gene_id=HG00140_ch_G0000566;Parent=HG00140_ch_T0001627;transcript_name=HG00140_ch_T0001627;gene_name=ENSG00000305658;ID=exon:HG00140_ch_T0001627:3;Name=ENSG00000305658;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	63809	96858	.	+	.	source_gene_common_name=OFD1P10Y;source_gene=ENSG00000225466.1;alternative_source_transcripts=ENST00000434110.1,ENST00000434110.1;gene_id=HG00140_ch_G0000567;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=OFD1P10Y;gene_sources=liftoff;ID=HG00140_ch_G0000567;Name=OFD1P10Y
HG00140_chrY_random0000005	CAT	transcript	63809	96858	1000	+	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;alternative_source_transcripts=ENST00000434110.1,ENST00000434110.1;transcript_id=HG00140_ch_T0001628;gene_id=HG00140_ch_G0000567;Parent=HG00140_ch_G0000567;transcript_name=HG00140_ch_T0001628;gene_name=OFD1P10Y;ID=HG00140_ch_T0001628;Name=OFD1P10Y
HG00140_chrY_random0000005	CAT	exon	63809	63915	.	+	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;alternative_source_transcripts=ENST00000434110.1,ENST00000434110.1;transcript_id=HG00140_ch_T0001628;gene_id=HG00140_ch_G0000567;Parent=HG00140_ch_T0001628;transcript_name=HG00140_ch_T0001628;gene_name=OFD1P10Y;ID=exon:HG00140_ch_T0001628:0;Name=OFD1P10Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	63916	65440	.	+	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;alternative_source_transcripts=ENST00000434110.1,ENST00000434110.1;transcript_id=HG00140_ch_T0001628;gene_id=HG00140_ch_G0000567;Parent=HG00140_ch_T0001628;transcript_name=HG00140_ch_T0001628;gene_name=OFD1P10Y;ID=intron:HG00140_ch_T0001628:0;Name=OFD1P10Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	65441	65565	.	+	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;alternative_source_transcripts=ENST00000434110.1,ENST00000434110.1;transcript_id=HG00140_ch_T0001628;gene_id=HG00140_ch_G0000567;Parent=HG00140_ch_T0001628;transcript_name=HG00140_ch_T0001628;gene_name=OFD1P10Y;ID=exon:HG00140_ch_T0001628:1;Name=OFD1P10Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	65566	66101	.	+	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;alternative_source_transcripts=ENST00000434110.1,ENST00000434110.1;transcript_id=HG00140_ch_T0001628;gene_id=HG00140_ch_G0000567;Parent=HG00140_ch_T0001628;transcript_name=HG00140_ch_T0001628;gene_name=OFD1P10Y;ID=intron:HG00140_ch_T0001628:1;Name=OFD1P10Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	66102	66211	.	+	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;alternative_source_transcripts=ENST00000434110.1,ENST00000434110.1;transcript_id=HG00140_ch_T0001628;gene_id=HG00140_ch_G0000567;Parent=HG00140_ch_T0001628;transcript_name=HG00140_ch_T0001628;gene_name=OFD1P10Y;ID=exon:HG00140_ch_T0001628:2;Name=OFD1P10Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	66212	67928	.	+	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;alternative_source_transcripts=ENST00000434110.1,ENST00000434110.1;transcript_id=HG00140_ch_T0001628;gene_id=HG00140_ch_G0000567;Parent=HG00140_ch_T0001628;transcript_name=HG00140_ch_T0001628;gene_name=OFD1P10Y;ID=intron:HG00140_ch_T0001628:2;Name=OFD1P10Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	67929	68544	.	+	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;alternative_source_transcripts=ENST00000434110.1,ENST00000434110.1;transcript_id=HG00140_ch_T0001628;gene_id=HG00140_ch_G0000567;Parent=HG00140_ch_T0001628;transcript_name=HG00140_ch_T0001628;gene_name=OFD1P10Y;ID=exon:HG00140_ch_T0001628:3;Name=OFD1P10Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	68545	68917	.	+	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;alternative_source_transcripts=ENST00000434110.1,ENST00000434110.1;transcript_id=HG00140_ch_T0001628;gene_id=HG00140_ch_G0000567;Parent=HG00140_ch_T0001628;transcript_name=HG00140_ch_T0001628;gene_name=OFD1P10Y;ID=intron:HG00140_ch_T0001628:3;Name=OFD1P10Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	68918	69022	.	+	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;alternative_source_transcripts=ENST00000434110.1,ENST00000434110.1;transcript_id=HG00140_ch_T0001628;gene_id=HG00140_ch_G0000567;Parent=HG00140_ch_T0001628;transcript_name=HG00140_ch_T0001628;gene_name=OFD1P10Y;ID=exon:HG00140_ch_T0001628:4;Name=OFD1P10Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	69023	88367	.	+	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;alternative_source_transcripts=ENST00000434110.1,ENST00000434110.1;transcript_id=HG00140_ch_T0001628;gene_id=HG00140_ch_G0000567;Parent=HG00140_ch_T0001628;transcript_name=HG00140_ch_T0001628;gene_name=OFD1P10Y;ID=intron:HG00140_ch_T0001628:4;Name=OFD1P10Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	88368	88468	.	+	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;alternative_source_transcripts=ENST00000434110.1,ENST00000434110.1;transcript_id=HG00140_ch_T0001628;gene_id=HG00140_ch_G0000567;Parent=HG00140_ch_T0001628;transcript_name=HG00140_ch_T0001628;gene_name=OFD1P10Y;ID=exon:HG00140_ch_T0001628:5;Name=OFD1P10Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	88469	95102	.	+	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;alternative_source_transcripts=ENST00000434110.1,ENST00000434110.1;transcript_id=HG00140_ch_T0001628;gene_id=HG00140_ch_G0000567;Parent=HG00140_ch_T0001628;transcript_name=HG00140_ch_T0001628;gene_name=OFD1P10Y;ID=intron:HG00140_ch_T0001628:5;Name=OFD1P10Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	95103	95257	.	+	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;alternative_source_transcripts=ENST00000434110.1,ENST00000434110.1;transcript_id=HG00140_ch_T0001628;gene_id=HG00140_ch_G0000567;Parent=HG00140_ch_T0001628;transcript_name=HG00140_ch_T0001628;gene_name=OFD1P10Y;ID=exon:HG00140_ch_T0001628:6;Name=OFD1P10Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	95258	96445	.	+	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;alternative_source_transcripts=ENST00000434110.1,ENST00000434110.1;transcript_id=HG00140_ch_T0001628;gene_id=HG00140_ch_G0000567;Parent=HG00140_ch_T0001628;transcript_name=HG00140_ch_T0001628;gene_name=OFD1P10Y;ID=intron:HG00140_ch_T0001628:6;Name=OFD1P10Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	96446	96527	.	+	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;alternative_source_transcripts=ENST00000434110.1,ENST00000434110.1;transcript_id=HG00140_ch_T0001628;gene_id=HG00140_ch_G0000567;Parent=HG00140_ch_T0001628;transcript_name=HG00140_ch_T0001628;gene_name=OFD1P10Y;ID=exon:HG00140_ch_T0001628:7;Name=OFD1P10Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	96528	96826	.	+	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;alternative_source_transcripts=ENST00000434110.1,ENST00000434110.1;transcript_id=HG00140_ch_T0001628;gene_id=HG00140_ch_G0000567;Parent=HG00140_ch_T0001628;transcript_name=HG00140_ch_T0001628;gene_name=OFD1P10Y;ID=intron:HG00140_ch_T0001628:7;Name=OFD1P10Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	96827	96858	.	+	.	source_transcript=ENST00000434110.1;source_transcript_name=OFD1P10Y-201;source_gene=ENSG00000225466.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000225466.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000434110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434110.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P10Y;alternative_source_transcripts=ENST00000434110.1,ENST00000434110.1;transcript_id=HG00140_ch_T0001628;gene_id=HG00140_ch_G0000567;Parent=HG00140_ch_T0001628;transcript_name=HG00140_ch_T0001628;gene_name=OFD1P10Y;ID=exon:HG00140_ch_T0001628:8;Name=OFD1P10Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	119834	123026	.	+	.	source_gene_common_name=ENSG00000295422;source_gene=ENSG00000295422.1;alternative_source_transcripts=ENST00000729927.1,ENST00000729927.1;gene_id=HG00140_ch_G0000568;gene_biotype=lncRNA;gene_name=ENSG00000295422;gene_sources=liftoff;ID=HG00140_ch_G0000568;Name=ENSG00000295422
HG00140_chrY_random0000005	CAT	transcript	119834	123026	1000	+	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;alternative_source_transcripts=ENST00000729927.1,ENST00000729927.1;transcript_id=HG00140_ch_T0001629;gene_id=HG00140_ch_G0000568;Parent=HG00140_ch_G0000568;transcript_name=HG00140_ch_T0001629;gene_name=ENSG00000295422;ID=HG00140_ch_T0001629;Name=ENSG00000295422
HG00140_chrY_random0000005	CAT	exon	119834	119944	.	+	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;alternative_source_transcripts=ENST00000729927.1,ENST00000729927.1;transcript_id=HG00140_ch_T0001629;gene_id=HG00140_ch_G0000568;Parent=HG00140_ch_T0001629;transcript_name=HG00140_ch_T0001629;gene_name=ENSG00000295422;ID=exon:HG00140_ch_T0001629:0;Name=ENSG00000295422;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	119945	120061	.	+	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;alternative_source_transcripts=ENST00000729927.1,ENST00000729927.1;transcript_id=HG00140_ch_T0001629;gene_id=HG00140_ch_G0000568;Parent=HG00140_ch_T0001629;transcript_name=HG00140_ch_T0001629;gene_name=ENSG00000295422;ID=intron:HG00140_ch_T0001629:0;Name=ENSG00000295422;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	120062	120122	.	+	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;alternative_source_transcripts=ENST00000729927.1,ENST00000729927.1;transcript_id=HG00140_ch_T0001629;gene_id=HG00140_ch_G0000568;Parent=HG00140_ch_T0001629;transcript_name=HG00140_ch_T0001629;gene_name=ENSG00000295422;ID=exon:HG00140_ch_T0001629:1;Name=ENSG00000295422;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	120123	121683	.	+	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;alternative_source_transcripts=ENST00000729927.1,ENST00000729927.1;transcript_id=HG00140_ch_T0001629;gene_id=HG00140_ch_G0000568;Parent=HG00140_ch_T0001629;transcript_name=HG00140_ch_T0001629;gene_name=ENSG00000295422;ID=intron:HG00140_ch_T0001629:1;Name=ENSG00000295422;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	121684	123026	.	+	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;alternative_source_transcripts=ENST00000729927.1,ENST00000729927.1;transcript_id=HG00140_ch_T0001629;gene_id=HG00140_ch_G0000568;Parent=HG00140_ch_T0001629;transcript_name=HG00140_ch_T0001629;gene_name=ENSG00000295422;ID=exon:HG00140_ch_T0001629:2;Name=ENSG00000295422;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	140078	141297	.	-	.	source_gene_common_name=HSFY6P;source_gene=ENSG00000224169.1;gene_id=HG00140_ch_G0000569;gene_biotype=unprocessed_pseudogene;gene_name=HSFY6P;gene_sources=liftoff;ID=HG00140_ch_G0000569;Name=HSFY6P
HG00140_chrY_random0000005	CAT	transcript	140078	141297	1000	-	.	source_transcript=ENST00000445573.1;source_transcript_name=HSFY6P-201;source_gene=ENSG00000224169.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224169.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445573.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445573.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY6P;transcript_id=HG00140_ch_T0001630;gene_id=HG00140_ch_G0000569;Parent=HG00140_ch_G0000569;transcript_name=HG00140_ch_T0001630;gene_name=HSFY6P;ID=HG00140_ch_T0001630;Name=HSFY6P
HG00140_chrY_random0000005	CAT	exon	140078	140236	.	-	.	source_transcript=ENST00000445573.1;source_transcript_name=HSFY6P-201;source_gene=ENSG00000224169.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224169.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445573.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445573.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY6P;transcript_id=HG00140_ch_T0001630;gene_id=HG00140_ch_G0000569;Parent=HG00140_ch_T0001630;transcript_name=HG00140_ch_T0001630;gene_name=HSFY6P;ID=exon:HG00140_ch_T0001630:0;Name=HSFY6P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	140237	140721	.	-	.	source_transcript=ENST00000445573.1;source_transcript_name=HSFY6P-201;source_gene=ENSG00000224169.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224169.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445573.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445573.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY6P;transcript_id=HG00140_ch_T0001630;gene_id=HG00140_ch_G0000569;Parent=HG00140_ch_T0001630;transcript_name=HG00140_ch_T0001630;gene_name=HSFY6P;ID=intron:HG00140_ch_T0001630:0;Name=HSFY6P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	140722	140881	.	-	.	source_transcript=ENST00000445573.1;source_transcript_name=HSFY6P-201;source_gene=ENSG00000224169.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224169.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445573.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445573.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY6P;transcript_id=HG00140_ch_T0001630;gene_id=HG00140_ch_G0000569;Parent=HG00140_ch_T0001630;transcript_name=HG00140_ch_T0001630;gene_name=HSFY6P;ID=exon:HG00140_ch_T0001630:1;Name=HSFY6P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	140882	141213	.	-	.	source_transcript=ENST00000445573.1;source_transcript_name=HSFY6P-201;source_gene=ENSG00000224169.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224169.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445573.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445573.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY6P;transcript_id=HG00140_ch_T0001630;gene_id=HG00140_ch_G0000569;Parent=HG00140_ch_T0001630;transcript_name=HG00140_ch_T0001630;gene_name=HSFY6P;ID=intron:HG00140_ch_T0001630:1;Name=HSFY6P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	141214	141297	.	-	.	source_transcript=ENST00000445573.1;source_transcript_name=HSFY6P-201;source_gene=ENSG00000224169.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224169.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445573.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445573.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY6P;transcript_id=HG00140_ch_T0001630;gene_id=HG00140_ch_G0000569;Parent=HG00140_ch_T0001630;transcript_name=HG00140_ch_T0001630;gene_name=HSFY6P;ID=exon:HG00140_ch_T0001630:2;Name=HSFY6P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	141705	150061	.	-	.	source_gene_common_name=USP9YP18;source_gene=ENSG00000223407.1;gene_id=HG00140_ch_G0000570;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP18;gene_sources=liftoff;ID=HG00140_ch_G0000570;Name=USP9YP18
HG00140_chrY_random0000005	CAT	transcript	141705	150061	1000	-	.	source_transcript=ENST00000425912.1;source_transcript_name=USP9YP18-201;source_gene=ENSG00000223407.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223407.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425912.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425912.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP18;transcript_id=HG00140_ch_T0001631;gene_id=HG00140_ch_G0000570;Parent=HG00140_ch_G0000570;transcript_name=HG00140_ch_T0001631;gene_name=USP9YP18;ID=HG00140_ch_T0001631;Name=USP9YP18
HG00140_chrY_random0000005	CAT	exon	141705	141743	.	-	.	source_transcript=ENST00000425912.1;source_transcript_name=USP9YP18-201;source_gene=ENSG00000223407.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223407.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425912.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425912.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP18;transcript_id=HG00140_ch_T0001631;gene_id=HG00140_ch_G0000570;Parent=HG00140_ch_T0001631;transcript_name=HG00140_ch_T0001631;gene_name=USP9YP18;ID=exon:HG00140_ch_T0001631:0;Name=USP9YP18;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	141744	143458	.	-	.	source_transcript=ENST00000425912.1;source_transcript_name=USP9YP18-201;source_gene=ENSG00000223407.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223407.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425912.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425912.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP18;transcript_id=HG00140_ch_T0001631;gene_id=HG00140_ch_G0000570;Parent=HG00140_ch_T0001631;transcript_name=HG00140_ch_T0001631;gene_name=USP9YP18;ID=intron:HG00140_ch_T0001631:0;Name=USP9YP18;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	143459	143588	.	-	.	source_transcript=ENST00000425912.1;source_transcript_name=USP9YP18-201;source_gene=ENSG00000223407.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223407.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425912.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425912.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP18;transcript_id=HG00140_ch_T0001631;gene_id=HG00140_ch_G0000570;Parent=HG00140_ch_T0001631;transcript_name=HG00140_ch_T0001631;gene_name=USP9YP18;ID=exon:HG00140_ch_T0001631:1;Name=USP9YP18;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	143589	145946	.	-	.	source_transcript=ENST00000425912.1;source_transcript_name=USP9YP18-201;source_gene=ENSG00000223407.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223407.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425912.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425912.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP18;transcript_id=HG00140_ch_T0001631;gene_id=HG00140_ch_G0000570;Parent=HG00140_ch_T0001631;transcript_name=HG00140_ch_T0001631;gene_name=USP9YP18;ID=intron:HG00140_ch_T0001631:1;Name=USP9YP18;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	145947	146135	.	-	.	source_transcript=ENST00000425912.1;source_transcript_name=USP9YP18-201;source_gene=ENSG00000223407.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223407.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425912.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425912.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP18;transcript_id=HG00140_ch_T0001631;gene_id=HG00140_ch_G0000570;Parent=HG00140_ch_T0001631;transcript_name=HG00140_ch_T0001631;gene_name=USP9YP18;ID=exon:HG00140_ch_T0001631:2;Name=USP9YP18;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	146136	147921	.	-	.	source_transcript=ENST00000425912.1;source_transcript_name=USP9YP18-201;source_gene=ENSG00000223407.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223407.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425912.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425912.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP18;transcript_id=HG00140_ch_T0001631;gene_id=HG00140_ch_G0000570;Parent=HG00140_ch_T0001631;transcript_name=HG00140_ch_T0001631;gene_name=USP9YP18;ID=intron:HG00140_ch_T0001631:2;Name=USP9YP18;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	147922	148037	.	-	.	source_transcript=ENST00000425912.1;source_transcript_name=USP9YP18-201;source_gene=ENSG00000223407.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223407.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425912.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425912.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP18;transcript_id=HG00140_ch_T0001631;gene_id=HG00140_ch_G0000570;Parent=HG00140_ch_T0001631;transcript_name=HG00140_ch_T0001631;gene_name=USP9YP18;ID=exon:HG00140_ch_T0001631:3;Name=USP9YP18;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	148038	149840	.	-	.	source_transcript=ENST00000425912.1;source_transcript_name=USP9YP18-201;source_gene=ENSG00000223407.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223407.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425912.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425912.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP18;transcript_id=HG00140_ch_T0001631;gene_id=HG00140_ch_G0000570;Parent=HG00140_ch_T0001631;transcript_name=HG00140_ch_T0001631;gene_name=USP9YP18;ID=intron:HG00140_ch_T0001631:3;Name=USP9YP18;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	149841	150061	.	-	.	source_transcript=ENST00000425912.1;source_transcript_name=USP9YP18-201;source_gene=ENSG00000223407.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223407.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000425912.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425912.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP18;transcript_id=HG00140_ch_T0001631;gene_id=HG00140_ch_G0000570;Parent=HG00140_ch_T0001631;transcript_name=HG00140_ch_T0001631;gene_name=USP9YP18;ID=exon:HG00140_ch_T0001631:4;Name=USP9YP18;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	156618	157631	.	+	.	source_gene_common_name=CDY14P;source_gene=ENSG00000226873.1;gene_id=HG00140_ch_G0000571;gene_biotype=unprocessed_pseudogene;gene_name=CDY14P;gene_sources=liftoff;ID=HG00140_ch_G0000571;Name=CDY14P
HG00140_chrY_random0000005	CAT	transcript	156618	157631	1000	+	.	source_transcript=ENST00000431260.1;source_transcript_name=CDY14P-201;source_gene=ENSG00000226873.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226873.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431260.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY14P;transcript_id=HG00140_ch_T0001632;gene_id=HG00140_ch_G0000571;Parent=HG00140_ch_G0000571;transcript_name=HG00140_ch_T0001632;gene_name=CDY14P;ID=HG00140_ch_T0001632;Name=CDY14P
HG00140_chrY_random0000005	CAT	exon	156618	157631	.	+	.	source_transcript=ENST00000431260.1;source_transcript_name=CDY14P-201;source_gene=ENSG00000226873.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226873.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431260.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431260.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY14P;transcript_id=HG00140_ch_T0001632;gene_id=HG00140_ch_G0000571;Parent=HG00140_ch_T0001632;transcript_name=HG00140_ch_T0001632;gene_name=CDY14P;ID=exon:HG00140_ch_T0001632:0;Name=CDY14P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	160743	161074	.	+	.	source_gene_common_name=ELOCP16;source_gene=ENSG00000227915.1;gene_id=HG00140_ch_G0000572;gene_biotype=unprocessed_pseudogene;gene_name=ELOCP16;gene_sources=liftoff;ID=HG00140_ch_G0000572;Name=ELOCP16
HG00140_chrY_random0000005	CAT	transcript	160743	161074	1000	+	.	source_transcript=ENST00000444494.1;source_transcript_name=ELOCP16-201;source_gene=ENSG00000227915.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227915.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444494.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444494.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP16;transcript_id=HG00140_ch_T0001633;gene_id=HG00140_ch_G0000572;Parent=HG00140_ch_G0000572;transcript_name=HG00140_ch_T0001633;gene_name=ELOCP16;ID=HG00140_ch_T0001633;Name=ELOCP16
HG00140_chrY_random0000005	CAT	exon	160743	161074	.	+	.	source_transcript=ENST00000444494.1;source_transcript_name=ELOCP16-201;source_gene=ENSG00000227915.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227915.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000444494.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000444494.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP16;transcript_id=HG00140_ch_T0001633;gene_id=HG00140_ch_G0000572;Parent=HG00140_ch_T0001633;transcript_name=HG00140_ch_T0001633;gene_name=ELOCP16;ID=exon:HG00140_ch_T0001633:0;Name=ELOCP16;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	198161	209047	.	-	.	source_gene_common_name=XKRYP3;source_gene=ENSG00000236620.1;alternative_source_transcripts=ENST00000442113.1,ENST00000442113.1;gene_id=HG00140_ch_G0000573;gene_biotype=unprocessed_pseudogene;gene_name=XKRYP3;gene_sources=liftoff;ID=HG00140_ch_G0000573;Name=XKRYP3
HG00140_chrY_random0000005	CAT	transcript	198161	209047	1000	-	.	source_transcript=ENST00000442113.1;source_transcript_name=XKRYP3-201;source_gene=ENSG00000236620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442113.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP3;alternative_source_transcripts=ENST00000442113.1,ENST00000442113.1;transcript_id=HG00140_ch_T0001634;gene_id=HG00140_ch_G0000573;Parent=HG00140_ch_G0000573;transcript_name=HG00140_ch_T0001634;gene_name=XKRYP3;ID=HG00140_ch_T0001634;Name=XKRYP3
HG00140_chrY_random0000005	CAT	exon	198161	198940	.	-	.	source_transcript=ENST00000442113.1;source_transcript_name=XKRYP3-201;source_gene=ENSG00000236620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442113.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP3;alternative_source_transcripts=ENST00000442113.1,ENST00000442113.1;transcript_id=HG00140_ch_T0001634;gene_id=HG00140_ch_G0000573;Parent=HG00140_ch_T0001634;transcript_name=HG00140_ch_T0001634;gene_name=XKRYP3;ID=exon:HG00140_ch_T0001634:0;Name=XKRYP3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	198941	208711	.	-	.	source_transcript=ENST00000442113.1;source_transcript_name=XKRYP3-201;source_gene=ENSG00000236620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442113.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP3;alternative_source_transcripts=ENST00000442113.1,ENST00000442113.1;transcript_id=HG00140_ch_T0001634;gene_id=HG00140_ch_G0000573;Parent=HG00140_ch_T0001634;transcript_name=HG00140_ch_T0001634;gene_name=XKRYP3;ID=intron:HG00140_ch_T0001634:0;Name=XKRYP3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	208712	209047	.	-	.	source_transcript=ENST00000442113.1;source_transcript_name=XKRYP3-201;source_gene=ENSG00000236620.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000236620.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442113.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442113.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP3;alternative_source_transcripts=ENST00000442113.1,ENST00000442113.1;transcript_id=HG00140_ch_T0001634;gene_id=HG00140_ch_G0000573;Parent=HG00140_ch_T0001634;transcript_name=HG00140_ch_T0001634;gene_name=XKRYP3;ID=exon:HG00140_ch_T0001634:1;Name=XKRYP3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	216432	218488	.	+	.	source_gene_common_name=USP9YP25;source_gene=ENSG00000224866.1;gene_id=HG00140_ch_G0000574;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP25;gene_sources=liftoff;ID=HG00140_ch_G0000574;Name=USP9YP25
HG00140_chrY_random0000005	CAT	transcript	216432	218488	1000	+	.	source_transcript=ENST00000457708.1;source_transcript_name=USP9YP25-201;source_gene=ENSG00000224866.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224866.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457708.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP25;transcript_id=HG00140_ch_T0001635;gene_id=HG00140_ch_G0000574;Parent=HG00140_ch_G0000574;transcript_name=HG00140_ch_T0001635;gene_name=USP9YP25;ID=HG00140_ch_T0001635;Name=USP9YP25
HG00140_chrY_random0000005	CAT	exon	216432	216682	.	+	.	source_transcript=ENST00000457708.1;source_transcript_name=USP9YP25-201;source_gene=ENSG00000224866.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224866.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457708.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP25;transcript_id=HG00140_ch_T0001635;gene_id=HG00140_ch_G0000574;Parent=HG00140_ch_T0001635;transcript_name=HG00140_ch_T0001635;gene_name=USP9YP25;ID=exon:HG00140_ch_T0001635:0;Name=USP9YP25;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	216683	218296	.	+	.	source_transcript=ENST00000457708.1;source_transcript_name=USP9YP25-201;source_gene=ENSG00000224866.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224866.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457708.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP25;transcript_id=HG00140_ch_T0001635;gene_id=HG00140_ch_G0000574;Parent=HG00140_ch_T0001635;transcript_name=HG00140_ch_T0001635;gene_name=USP9YP25;ID=intron:HG00140_ch_T0001635:0;Name=USP9YP25;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	218297	218488	.	+	.	source_transcript=ENST00000457708.1;source_transcript_name=USP9YP25-201;source_gene=ENSG00000224866.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224866.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000457708.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000457708.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP25;transcript_id=HG00140_ch_T0001635;gene_id=HG00140_ch_G0000574;Parent=HG00140_ch_T0001635;transcript_name=HG00140_ch_T0001635;gene_name=USP9YP25;ID=exon:HG00140_ch_T0001635:1;Name=USP9YP25;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	222493	228933	.	-	.	source_gene_common_name=USP9YP29;source_gene=ENSG00000232424.1;gene_id=HG00140_ch_G0000575;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP29;gene_sources=liftoff;ID=HG00140_ch_G0000575;Name=USP9YP29
HG00140_chrY_random0000005	CAT	transcript	222493	228933	1000	-	.	source_transcript=ENST00000445112.1;source_transcript_name=USP9YP29-201;source_gene=ENSG00000232424.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232424.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445112.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP29;transcript_id=HG00140_ch_T0001636;gene_id=HG00140_ch_G0000575;Parent=HG00140_ch_G0000575;transcript_name=HG00140_ch_T0001636;gene_name=USP9YP29;ID=HG00140_ch_T0001636;Name=USP9YP29
HG00140_chrY_random0000005	CAT	exon	222493	222588	.	-	.	source_transcript=ENST00000445112.1;source_transcript_name=USP9YP29-201;source_gene=ENSG00000232424.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232424.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445112.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP29;transcript_id=HG00140_ch_T0001636;gene_id=HG00140_ch_G0000575;Parent=HG00140_ch_T0001636;transcript_name=HG00140_ch_T0001636;gene_name=USP9YP29;ID=exon:HG00140_ch_T0001636:0;Name=USP9YP29;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	222589	222970	.	-	.	source_transcript=ENST00000445112.1;source_transcript_name=USP9YP29-201;source_gene=ENSG00000232424.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232424.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445112.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP29;transcript_id=HG00140_ch_T0001636;gene_id=HG00140_ch_G0000575;Parent=HG00140_ch_T0001636;transcript_name=HG00140_ch_T0001636;gene_name=USP9YP29;ID=intron:HG00140_ch_T0001636:0;Name=USP9YP29;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	222971	223129	.	-	.	source_transcript=ENST00000445112.1;source_transcript_name=USP9YP29-201;source_gene=ENSG00000232424.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232424.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445112.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP29;transcript_id=HG00140_ch_T0001636;gene_id=HG00140_ch_G0000575;Parent=HG00140_ch_T0001636;transcript_name=HG00140_ch_T0001636;gene_name=USP9YP29;ID=exon:HG00140_ch_T0001636:1;Name=USP9YP29;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	223130	223339	.	-	.	source_transcript=ENST00000445112.1;source_transcript_name=USP9YP29-201;source_gene=ENSG00000232424.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232424.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445112.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP29;transcript_id=HG00140_ch_T0001636;gene_id=HG00140_ch_G0000575;Parent=HG00140_ch_T0001636;transcript_name=HG00140_ch_T0001636;gene_name=USP9YP29;ID=intron:HG00140_ch_T0001636:1;Name=USP9YP29;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	223340	223369	.	-	.	source_transcript=ENST00000445112.1;source_transcript_name=USP9YP29-201;source_gene=ENSG00000232424.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232424.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445112.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP29;transcript_id=HG00140_ch_T0001636;gene_id=HG00140_ch_G0000575;Parent=HG00140_ch_T0001636;transcript_name=HG00140_ch_T0001636;gene_name=USP9YP29;ID=exon:HG00140_ch_T0001636:2;Name=USP9YP29;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	223370	223518	.	-	.	source_transcript=ENST00000445112.1;source_transcript_name=USP9YP29-201;source_gene=ENSG00000232424.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232424.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445112.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP29;transcript_id=HG00140_ch_T0001636;gene_id=HG00140_ch_G0000575;Parent=HG00140_ch_T0001636;transcript_name=HG00140_ch_T0001636;gene_name=USP9YP29;ID=intron:HG00140_ch_T0001636:2;Name=USP9YP29;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	223519	223668	.	-	.	source_transcript=ENST00000445112.1;source_transcript_name=USP9YP29-201;source_gene=ENSG00000232424.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232424.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445112.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP29;transcript_id=HG00140_ch_T0001636;gene_id=HG00140_ch_G0000575;Parent=HG00140_ch_T0001636;transcript_name=HG00140_ch_T0001636;gene_name=USP9YP29;ID=exon:HG00140_ch_T0001636:3;Name=USP9YP29;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	223669	228805	.	-	.	source_transcript=ENST00000445112.1;source_transcript_name=USP9YP29-201;source_gene=ENSG00000232424.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232424.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445112.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP29;transcript_id=HG00140_ch_T0001636;gene_id=HG00140_ch_G0000575;Parent=HG00140_ch_T0001636;transcript_name=HG00140_ch_T0001636;gene_name=USP9YP29;ID=intron:HG00140_ch_T0001636:3;Name=USP9YP29;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	228806	228933	.	-	.	source_transcript=ENST00000445112.1;source_transcript_name=USP9YP29-201;source_gene=ENSG00000232424.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232424.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000445112.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445112.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP29;transcript_id=HG00140_ch_T0001636;gene_id=HG00140_ch_G0000575;Parent=HG00140_ch_T0001636;transcript_name=HG00140_ch_T0001636;gene_name=USP9YP29;ID=exon:HG00140_ch_T0001636:4;Name=USP9YP29;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	223177	223340	.	-	.	source_gene_common_name=RNU1-97P;source_gene=ENSG00000252681.1;gene_id=HG00140_ch_G0000576;gene_biotype=snRNA;gene_name=RNU1-97P;gene_sources=liftoff;ID=HG00140_ch_G0000576;Name=RNU1-97P
HG00140_chrY_random0000005	CAT	transcript	223177	223340	1000	-	.	source_transcript=ENST00000516872.1;source_transcript_name=RNU1-97P-201;source_gene=ENSG00000252681.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252681.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516872.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516872.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-97P;transcript_id=HG00140_ch_T0001637;gene_id=HG00140_ch_G0000576;Parent=HG00140_ch_G0000576;transcript_name=HG00140_ch_T0001637;gene_name=RNU1-97P;ID=HG00140_ch_T0001637;Name=RNU1-97P
HG00140_chrY_random0000005	CAT	exon	223177	223340	.	-	.	source_transcript=ENST00000516872.1;source_transcript_name=RNU1-97P-201;source_gene=ENSG00000252681.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252681.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516872.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516872.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-97P;transcript_id=HG00140_ch_T0001637;gene_id=HG00140_ch_G0000576;Parent=HG00140_ch_T0001637;transcript_name=HG00140_ch_T0001637;gene_name=RNU1-97P;ID=exon:HG00140_ch_T0001637:0;Name=RNU1-97P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	233428	234000	.	+	.	source_gene_common_name=RAB9AP1;source_gene=ENSG00000232910.1;gene_id=HG00140_ch_G0000577;gene_biotype=unprocessed_pseudogene;gene_name=RAB9AP1;gene_sources=liftoff;ID=HG00140_ch_G0000577;Name=RAB9AP1
HG00140_chrY_random0000005	CAT	transcript	233428	234000	1000	+	.	source_transcript=ENST00000449393.1;source_transcript_name=RAB9AP1-201;source_gene=ENSG00000232910.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232910.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449393.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449393.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP1;transcript_id=HG00140_ch_T0001638;gene_id=HG00140_ch_G0000577;Parent=HG00140_ch_G0000577;transcript_name=HG00140_ch_T0001638;gene_name=RAB9AP1;ID=HG00140_ch_T0001638;Name=RAB9AP1
HG00140_chrY_random0000005	CAT	exon	233428	234000	.	+	.	source_transcript=ENST00000449393.1;source_transcript_name=RAB9AP1-201;source_gene=ENSG00000232910.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232910.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449393.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449393.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP1;transcript_id=HG00140_ch_T0001638;gene_id=HG00140_ch_G0000577;Parent=HG00140_ch_T0001638;transcript_name=HG00140_ch_T0001638;gene_name=RAB9AP1;ID=exon:HG00140_ch_T0001638:0;Name=RAB9AP1;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	245078	247823	.	-	.	source_gene_common_name=TRAPPC2P9;source_gene=ENSG00000232845.1;alternative_source_transcripts=ENST00000434556.1;gene_id=HG00140_ch_G0000578;gene_biotype=unprocessed_pseudogene;gene_name=TRAPPC2P9;gene_sources=liftoff;ID=HG00140_ch_G0000578;Name=TRAPPC2P9
HG00140_chrY_random0000005	CAT	transcript	245078	247823	1000	-	.	source_transcript=ENST00000434556.1;source_transcript_name=TRAPPC2P9-201;source_gene=ENSG00000232845.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232845.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434556.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434556.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P9;alternative_source_transcripts=ENST00000434556.1;transcript_id=HG00140_ch_T0001639;gene_id=HG00140_ch_G0000578;Parent=HG00140_ch_G0000578;transcript_name=HG00140_ch_T0001639;gene_name=TRAPPC2P9;ID=HG00140_ch_T0001639;Name=TRAPPC2P9
HG00140_chrY_random0000005	CAT	exon	245078	245163	.	-	.	source_transcript=ENST00000434556.1;source_transcript_name=TRAPPC2P9-201;source_gene=ENSG00000232845.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232845.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434556.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434556.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P9;alternative_source_transcripts=ENST00000434556.1;transcript_id=HG00140_ch_T0001639;gene_id=HG00140_ch_G0000578;Parent=HG00140_ch_T0001639;transcript_name=HG00140_ch_T0001639;gene_name=TRAPPC2P9;ID=exon:HG00140_ch_T0001639:0;Name=TRAPPC2P9;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	245164	245612	.	-	.	source_transcript=ENST00000434556.1;source_transcript_name=TRAPPC2P9-201;source_gene=ENSG00000232845.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232845.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434556.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434556.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P9;alternative_source_transcripts=ENST00000434556.1;transcript_id=HG00140_ch_T0001639;gene_id=HG00140_ch_G0000578;Parent=HG00140_ch_T0001639;transcript_name=HG00140_ch_T0001639;gene_name=TRAPPC2P9;ID=intron:HG00140_ch_T0001639:0;Name=TRAPPC2P9;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	245613	245757	.	-	.	source_transcript=ENST00000434556.1;source_transcript_name=TRAPPC2P9-201;source_gene=ENSG00000232845.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232845.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434556.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434556.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P9;alternative_source_transcripts=ENST00000434556.1;transcript_id=HG00140_ch_T0001639;gene_id=HG00140_ch_G0000578;Parent=HG00140_ch_T0001639;transcript_name=HG00140_ch_T0001639;gene_name=TRAPPC2P9;ID=exon:HG00140_ch_T0001639:1;Name=TRAPPC2P9;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	245758	247711	.	-	.	source_transcript=ENST00000434556.1;source_transcript_name=TRAPPC2P9-201;source_gene=ENSG00000232845.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232845.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434556.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434556.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P9;alternative_source_transcripts=ENST00000434556.1;transcript_id=HG00140_ch_T0001639;gene_id=HG00140_ch_G0000578;Parent=HG00140_ch_T0001639;transcript_name=HG00140_ch_T0001639;gene_name=TRAPPC2P9;ID=intron:HG00140_ch_T0001639:1;Name=TRAPPC2P9;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	247712	247823	.	-	.	source_transcript=ENST00000434556.1;source_transcript_name=TRAPPC2P9-201;source_gene=ENSG00000232845.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232845.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000434556.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000434556.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P9;alternative_source_transcripts=ENST00000434556.1;transcript_id=HG00140_ch_T0001639;gene_id=HG00140_ch_G0000578;Parent=HG00140_ch_T0001639;transcript_name=HG00140_ch_T0001639;gene_name=TRAPPC2P9;ID=exon:HG00140_ch_T0001639:2;Name=TRAPPC2P9;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	253472	280395	.	+	.	source_gene_common_name=OFD1P11Y;source_gene=ENSG00000237302.1;gene_id=HG00140_ch_G0000579;gene_biotype=unprocessed_pseudogene;gene_name=OFD1P11Y;gene_sources=liftoff;ID=HG00140_ch_G0000579;Name=OFD1P11Y
HG00140_chrY_random0000005	CAT	transcript	253472	280395	1000	+	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=HG00140_ch_T0001640;gene_id=HG00140_ch_G0000579;Parent=HG00140_ch_G0000579;transcript_name=HG00140_ch_T0001640;gene_name=OFD1P11Y;ID=HG00140_ch_T0001640;Name=OFD1P11Y
HG00140_chrY_random0000005	CAT	exon	253472	253569	.	+	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=HG00140_ch_T0001640;gene_id=HG00140_ch_G0000579;Parent=HG00140_ch_T0001640;transcript_name=HG00140_ch_T0001640;gene_name=OFD1P11Y;ID=exon:HG00140_ch_T0001640:0;Name=OFD1P11Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	253570	254987	.	+	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=HG00140_ch_T0001640;gene_id=HG00140_ch_G0000579;Parent=HG00140_ch_T0001640;transcript_name=HG00140_ch_T0001640;gene_name=OFD1P11Y;ID=intron:HG00140_ch_T0001640:0;Name=OFD1P11Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	254988	255189	.	+	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=HG00140_ch_T0001640;gene_id=HG00140_ch_G0000579;Parent=HG00140_ch_T0001640;transcript_name=HG00140_ch_T0001640;gene_name=OFD1P11Y;ID=exon:HG00140_ch_T0001640:1;Name=OFD1P11Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	255190	265880	.	+	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=HG00140_ch_T0001640;gene_id=HG00140_ch_G0000579;Parent=HG00140_ch_T0001640;transcript_name=HG00140_ch_T0001640;gene_name=OFD1P11Y;ID=intron:HG00140_ch_T0001640:1;Name=OFD1P11Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	265881	265949	.	+	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=HG00140_ch_T0001640;gene_id=HG00140_ch_G0000579;Parent=HG00140_ch_T0001640;transcript_name=HG00140_ch_T0001640;gene_name=OFD1P11Y;ID=exon:HG00140_ch_T0001640:2;Name=OFD1P11Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	265950	266033	.	+	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=HG00140_ch_T0001640;gene_id=HG00140_ch_G0000579;Parent=HG00140_ch_T0001640;transcript_name=HG00140_ch_T0001640;gene_name=OFD1P11Y;ID=intron:HG00140_ch_T0001640:2;Name=OFD1P11Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	266034	266064	.	+	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=HG00140_ch_T0001640;gene_id=HG00140_ch_G0000579;Parent=HG00140_ch_T0001640;transcript_name=HG00140_ch_T0001640;gene_name=OFD1P11Y;ID=exon:HG00140_ch_T0001640:3;Name=OFD1P11Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	266065	266854	.	+	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=HG00140_ch_T0001640;gene_id=HG00140_ch_G0000579;Parent=HG00140_ch_T0001640;transcript_name=HG00140_ch_T0001640;gene_name=OFD1P11Y;ID=intron:HG00140_ch_T0001640:3;Name=OFD1P11Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	266855	266978	.	+	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=HG00140_ch_T0001640;gene_id=HG00140_ch_G0000579;Parent=HG00140_ch_T0001640;transcript_name=HG00140_ch_T0001640;gene_name=OFD1P11Y;ID=exon:HG00140_ch_T0001640:4;Name=OFD1P11Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	266979	270816	.	+	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=HG00140_ch_T0001640;gene_id=HG00140_ch_G0000579;Parent=HG00140_ch_T0001640;transcript_name=HG00140_ch_T0001640;gene_name=OFD1P11Y;ID=intron:HG00140_ch_T0001640:4;Name=OFD1P11Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	270817	270951	.	+	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=HG00140_ch_T0001640;gene_id=HG00140_ch_G0000579;Parent=HG00140_ch_T0001640;transcript_name=HG00140_ch_T0001640;gene_name=OFD1P11Y;ID=exon:HG00140_ch_T0001640:5;Name=OFD1P11Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	270952	271295	.	+	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=HG00140_ch_T0001640;gene_id=HG00140_ch_G0000579;Parent=HG00140_ch_T0001640;transcript_name=HG00140_ch_T0001640;gene_name=OFD1P11Y;ID=intron:HG00140_ch_T0001640:5;Name=OFD1P11Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	271296	271441	.	+	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=HG00140_ch_T0001640;gene_id=HG00140_ch_G0000579;Parent=HG00140_ch_T0001640;transcript_name=HG00140_ch_T0001640;gene_name=OFD1P11Y;ID=exon:HG00140_ch_T0001640:6;Name=OFD1P11Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	271442	274487	.	+	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=HG00140_ch_T0001640;gene_id=HG00140_ch_G0000579;Parent=HG00140_ch_T0001640;transcript_name=HG00140_ch_T0001640;gene_name=OFD1P11Y;ID=intron:HG00140_ch_T0001640:6;Name=OFD1P11Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	274488	274594	.	+	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=HG00140_ch_T0001640;gene_id=HG00140_ch_G0000579;Parent=HG00140_ch_T0001640;transcript_name=HG00140_ch_T0001640;gene_name=OFD1P11Y;ID=exon:HG00140_ch_T0001640:7;Name=OFD1P11Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	274595	277242	.	+	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=HG00140_ch_T0001640;gene_id=HG00140_ch_G0000579;Parent=HG00140_ch_T0001640;transcript_name=HG00140_ch_T0001640;gene_name=OFD1P11Y;ID=intron:HG00140_ch_T0001640:7;Name=OFD1P11Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	277243	277361	.	+	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=HG00140_ch_T0001640;gene_id=HG00140_ch_G0000579;Parent=HG00140_ch_T0001640;transcript_name=HG00140_ch_T0001640;gene_name=OFD1P11Y;ID=exon:HG00140_ch_T0001640:8;Name=OFD1P11Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	277362	279147	.	+	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=HG00140_ch_T0001640;gene_id=HG00140_ch_G0000579;Parent=HG00140_ch_T0001640;transcript_name=HG00140_ch_T0001640;gene_name=OFD1P11Y;ID=intron:HG00140_ch_T0001640:8;Name=OFD1P11Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	279148	279221	.	+	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=HG00140_ch_T0001640;gene_id=HG00140_ch_G0000579;Parent=HG00140_ch_T0001640;transcript_name=HG00140_ch_T0001640;gene_name=OFD1P11Y;ID=exon:HG00140_ch_T0001640:9;Name=OFD1P11Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	279222	280323	.	+	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=HG00140_ch_T0001640;gene_id=HG00140_ch_G0000579;Parent=HG00140_ch_T0001640;transcript_name=HG00140_ch_T0001640;gene_name=OFD1P11Y;ID=intron:HG00140_ch_T0001640:9;Name=OFD1P11Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	280324	280395	.	+	.	source_transcript=ENST00000418213.1;source_transcript_name=OFD1P11Y-201;source_gene=ENSG00000237302.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237302.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418213.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418213.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P11Y;transcript_id=HG00140_ch_T0001640;gene_id=HG00140_ch_G0000579;Parent=HG00140_ch_T0001640;transcript_name=HG00140_ch_T0001640;gene_name=OFD1P11Y;ID=exon:HG00140_ch_T0001640:10;Name=OFD1P11Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	291058	291296	.	-	.	source_gene_common_name=ELOCP9;source_gene=ENSG00000231540.1;alternative_source_transcripts=ENST00000418624.1;gene_id=HG00140_ch_G0000580;gene_biotype=processed_pseudogene;gene_name=ELOCP9;gene_sources=liftoff;ID=HG00140_ch_G0000580;Name=ELOCP9
HG00140_chrY_random0000005	CAT	transcript	291058	291296	1000	-	.	source_transcript=ENST00000418624.1;source_transcript_name=ELOCP9-201;source_gene=ENSG00000231540.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000231540.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000418624.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418624.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP9;alternative_source_transcripts=ENST00000418624.1;transcript_id=HG00140_ch_T0001641;gene_id=HG00140_ch_G0000580;Parent=HG00140_ch_G0000580;transcript_name=HG00140_ch_T0001641;gene_name=ELOCP9;ID=HG00140_ch_T0001641;Name=ELOCP9
HG00140_chrY_random0000005	CAT	exon	291058	291296	.	-	.	source_transcript=ENST00000418624.1;source_transcript_name=ELOCP9-201;source_gene=ENSG00000231540.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000231540.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000418624.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418624.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP9;alternative_source_transcripts=ENST00000418624.1;transcript_id=HG00140_ch_T0001641;gene_id=HG00140_ch_G0000580;Parent=HG00140_ch_T0001641;transcript_name=HG00140_ch_T0001641;gene_name=ELOCP9;ID=exon:HG00140_ch_T0001641:0;Name=ELOCP9;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	337751	339320	.	-	.	source_gene_common_name=CDY15P;source_gene=ENSG00000223362.1;alternative_source_transcripts=ENST00000421995.1;gene_id=HG00140_ch_G0000581;gene_biotype=unprocessed_pseudogene;gene_name=CDY15P;gene_sources=liftoff;ID=HG00140_ch_G0000581;Name=CDY15P
HG00140_chrY_random0000005	CAT	transcript	337751	339320	1000	-	.	source_transcript=ENST00000421995.1;source_transcript_name=CDY15P-201;source_gene=ENSG00000223362.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223362.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421995.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY15P;alternative_source_transcripts=ENST00000421995.1;transcript_id=HG00140_ch_T0001642;gene_id=HG00140_ch_G0000581;Parent=HG00140_ch_G0000581;transcript_name=HG00140_ch_T0001642;gene_name=CDY15P;ID=HG00140_ch_T0001642;Name=CDY15P
HG00140_chrY_random0000005	CAT	exon	337751	339320	.	-	.	source_transcript=ENST00000421995.1;source_transcript_name=CDY15P-201;source_gene=ENSG00000223362.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223362.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421995.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY15P;alternative_source_transcripts=ENST00000421995.1;transcript_id=HG00140_ch_T0001642;gene_id=HG00140_ch_G0000581;Parent=HG00140_ch_T0001642;transcript_name=HG00140_ch_T0001642;gene_name=CDY15P;ID=exon:HG00140_ch_T0001642:0;Name=CDY15P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	399472	399954	.	-	.	source_gene_common_name=XKRYP4;source_gene=ENSG00000231026.1;alternative_source_transcripts=ENST00000414395.1;gene_id=HG00140_ch_G0000582;gene_biotype=unprocessed_pseudogene;gene_name=XKRYP4;gene_sources=liftoff;ID=HG00140_ch_G0000582;Name=XKRYP4
HG00140_chrY_random0000005	CAT	transcript	399472	399954	1000	-	.	source_transcript=ENST00000414395.1;source_transcript_name=XKRYP4-201;source_gene=ENSG00000231026.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231026.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414395.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414395.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP4;alternative_source_transcripts=ENST00000414395.1;transcript_id=HG00140_ch_T0001643;gene_id=HG00140_ch_G0000582;Parent=HG00140_ch_G0000582;transcript_name=HG00140_ch_T0001643;gene_name=XKRYP4;ID=HG00140_ch_T0001643;Name=XKRYP4
HG00140_chrY_random0000005	CAT	exon	399472	399954	.	-	.	source_transcript=ENST00000414395.1;source_transcript_name=XKRYP4-201;source_gene=ENSG00000231026.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231026.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414395.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414395.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP4;alternative_source_transcripts=ENST00000414395.1;transcript_id=HG00140_ch_T0001643;gene_id=HG00140_ch_G0000582;Parent=HG00140_ch_T0001643;transcript_name=HG00140_ch_T0001643;gene_name=XKRYP4;ID=exon:HG00140_ch_T0001643:0;Name=XKRYP4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	402136	403741	.	+	.	source_gene_common_name=USP9YP13;source_gene=ENSG00000224571.1;alternative_source_transcripts=ENST00000417797.1;gene_id=HG00140_ch_G0000583;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP13;gene_sources=liftoff;ID=HG00140_ch_G0000583;Name=USP9YP13
HG00140_chrY_random0000005	CAT	transcript	402136	403741	1000	+	.	source_transcript=ENST00000417797.1;source_transcript_name=USP9YP13-201;source_gene=ENSG00000224571.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224571.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417797.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP13;alternative_source_transcripts=ENST00000417797.1;transcript_id=HG00140_ch_T0001644;gene_id=HG00140_ch_G0000583;Parent=HG00140_ch_G0000583;transcript_name=HG00140_ch_T0001644;gene_name=USP9YP13;ID=HG00140_ch_T0001644;Name=USP9YP13
HG00140_chrY_random0000005	CAT	exon	402136	402355	.	+	.	source_transcript=ENST00000417797.1;source_transcript_name=USP9YP13-201;source_gene=ENSG00000224571.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224571.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417797.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP13;alternative_source_transcripts=ENST00000417797.1;transcript_id=HG00140_ch_T0001644;gene_id=HG00140_ch_G0000583;Parent=HG00140_ch_T0001644;transcript_name=HG00140_ch_T0001644;gene_name=USP9YP13;ID=exon:HG00140_ch_T0001644:0;Name=USP9YP13;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	402356	403481	.	+	.	source_transcript=ENST00000417797.1;source_transcript_name=USP9YP13-201;source_gene=ENSG00000224571.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224571.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417797.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP13;alternative_source_transcripts=ENST00000417797.1;transcript_id=HG00140_ch_T0001644;gene_id=HG00140_ch_G0000583;Parent=HG00140_ch_T0001644;transcript_name=HG00140_ch_T0001644;gene_name=USP9YP13;ID=intron:HG00140_ch_T0001644:0;Name=USP9YP13;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	403482	403741	.	+	.	source_transcript=ENST00000417797.1;source_transcript_name=USP9YP13-201;source_gene=ENSG00000224571.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224571.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000417797.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417797.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP13;alternative_source_transcripts=ENST00000417797.1;transcript_id=HG00140_ch_T0001644;gene_id=HG00140_ch_G0000583;Parent=HG00140_ch_T0001644;transcript_name=HG00140_ch_T0001644;gene_name=USP9YP13;ID=exon:HG00140_ch_T0001644:1;Name=USP9YP13;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	417180	422328	.	+	.	source_gene_common_name=USP9YP11;source_gene=ENSG00000226369.1;alternative_source_transcripts=ENST00000427537.1;gene_id=HG00140_ch_G0000584;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP11;gene_sources=liftoff;ID=HG00140_ch_G0000584;Name=USP9YP11
HG00140_chrY_random0000005	CAT	transcript	417180	422328	1000	+	.	source_transcript=ENST00000427537.1;source_transcript_name=USP9YP11-201;source_gene=ENSG00000226369.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226369.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427537.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427537.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP11;alternative_source_transcripts=ENST00000427537.1;transcript_id=HG00140_ch_T0001645;gene_id=HG00140_ch_G0000584;Parent=HG00140_ch_G0000584;transcript_name=HG00140_ch_T0001645;gene_name=USP9YP11;ID=HG00140_ch_T0001645;Name=USP9YP11
HG00140_chrY_random0000005	CAT	exon	417180	417218	.	+	.	source_transcript=ENST00000427537.1;source_transcript_name=USP9YP11-201;source_gene=ENSG00000226369.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226369.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427537.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427537.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP11;alternative_source_transcripts=ENST00000427537.1;transcript_id=HG00140_ch_T0001645;gene_id=HG00140_ch_G0000584;Parent=HG00140_ch_T0001645;transcript_name=HG00140_ch_T0001645;gene_name=USP9YP11;ID=exon:HG00140_ch_T0001645:0;Name=USP9YP11;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	417219	418892	.	+	.	source_transcript=ENST00000427537.1;source_transcript_name=USP9YP11-201;source_gene=ENSG00000226369.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226369.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427537.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427537.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP11;alternative_source_transcripts=ENST00000427537.1;transcript_id=HG00140_ch_T0001645;gene_id=HG00140_ch_G0000584;Parent=HG00140_ch_T0001645;transcript_name=HG00140_ch_T0001645;gene_name=USP9YP11;ID=intron:HG00140_ch_T0001645:0;Name=USP9YP11;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	418893	419116	.	+	.	source_transcript=ENST00000427537.1;source_transcript_name=USP9YP11-201;source_gene=ENSG00000226369.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226369.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427537.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427537.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP11;alternative_source_transcripts=ENST00000427537.1;transcript_id=HG00140_ch_T0001645;gene_id=HG00140_ch_G0000584;Parent=HG00140_ch_T0001645;transcript_name=HG00140_ch_T0001645;gene_name=USP9YP11;ID=exon:HG00140_ch_T0001645:1;Name=USP9YP11;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	419117	420239	.	+	.	source_transcript=ENST00000427537.1;source_transcript_name=USP9YP11-201;source_gene=ENSG00000226369.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226369.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427537.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427537.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP11;alternative_source_transcripts=ENST00000427537.1;transcript_id=HG00140_ch_T0001645;gene_id=HG00140_ch_G0000584;Parent=HG00140_ch_T0001645;transcript_name=HG00140_ch_T0001645;gene_name=USP9YP11;ID=intron:HG00140_ch_T0001645:1;Name=USP9YP11;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	420240	420502	.	+	.	source_transcript=ENST00000427537.1;source_transcript_name=USP9YP11-201;source_gene=ENSG00000226369.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226369.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427537.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427537.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP11;alternative_source_transcripts=ENST00000427537.1;transcript_id=HG00140_ch_T0001645;gene_id=HG00140_ch_G0000584;Parent=HG00140_ch_T0001645;transcript_name=HG00140_ch_T0001645;gene_name=USP9YP11;ID=exon:HG00140_ch_T0001645:2;Name=USP9YP11;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	420503	422137	.	+	.	source_transcript=ENST00000427537.1;source_transcript_name=USP9YP11-201;source_gene=ENSG00000226369.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226369.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427537.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427537.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP11;alternative_source_transcripts=ENST00000427537.1;transcript_id=HG00140_ch_T0001645;gene_id=HG00140_ch_G0000584;Parent=HG00140_ch_T0001645;transcript_name=HG00140_ch_T0001645;gene_name=USP9YP11;ID=intron:HG00140_ch_T0001645:2;Name=USP9YP11;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	422138	422328	.	+	.	source_transcript=ENST00000427537.1;source_transcript_name=USP9YP11-201;source_gene=ENSG00000226369.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226369.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427537.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427537.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP11;alternative_source_transcripts=ENST00000427537.1;transcript_id=HG00140_ch_T0001645;gene_id=HG00140_ch_G0000584;Parent=HG00140_ch_T0001645;transcript_name=HG00140_ch_T0001645;gene_name=USP9YP11;ID=exon:HG00140_ch_T0001645:3;Name=USP9YP11;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	418954	423849	.	-	.	source_gene_common_name=TTTY3B;source_gene=ENSG00000280961.1;alternative_source_transcripts=ENST00000631331.1;gene_id=HG00140_ch_G0000585;gene_biotype=lncRNA;gene_name=TTTY3B;gene_sources=liftoff;ID=HG00140_ch_G0000585;Name=TTTY3B
HG00140_chrY_random0000005	CAT	transcript	418954	423849	1000	-	.	source_transcript=ENST00000631331.1;source_transcript_name=TTTY3B-201;source_gene=ENSG00000280961.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000280961.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000631331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000631331.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=ENST00000631331.1;transcript_id=HG00140_ch_T0001646;gene_id=HG00140_ch_G0000585;Parent=HG00140_ch_G0000585;transcript_name=HG00140_ch_T0001646;gene_name=TTTY3B;ID=HG00140_ch_T0001646;Name=TTTY3B
HG00140_chrY_random0000005	CAT	exon	418954	419058	.	-	.	source_transcript=ENST00000631331.1;source_transcript_name=TTTY3B-201;source_gene=ENSG00000280961.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000280961.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000631331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000631331.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=ENST00000631331.1;transcript_id=HG00140_ch_T0001646;gene_id=HG00140_ch_G0000585;Parent=HG00140_ch_T0001646;transcript_name=HG00140_ch_T0001646;gene_name=TTTY3B;ID=exon:HG00140_ch_T0001646:0;Name=TTTY3B;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	419059	421412	.	-	.	source_transcript=ENST00000631331.1;source_transcript_name=TTTY3B-201;source_gene=ENSG00000280961.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000280961.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000631331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000631331.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=ENST00000631331.1;transcript_id=HG00140_ch_T0001646;gene_id=HG00140_ch_G0000585;Parent=HG00140_ch_T0001646;transcript_name=HG00140_ch_T0001646;gene_name=TTTY3B;ID=intron:HG00140_ch_T0001646:0;Name=TTTY3B;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	421413	421547	.	-	.	source_transcript=ENST00000631331.1;source_transcript_name=TTTY3B-201;source_gene=ENSG00000280961.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000280961.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000631331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000631331.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=ENST00000631331.1;transcript_id=HG00140_ch_T0001646;gene_id=HG00140_ch_G0000585;Parent=HG00140_ch_T0001646;transcript_name=HG00140_ch_T0001646;gene_name=TTTY3B;ID=exon:HG00140_ch_T0001646:1;Name=TTTY3B;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	421548	423745	.	-	.	source_transcript=ENST00000631331.1;source_transcript_name=TTTY3B-201;source_gene=ENSG00000280961.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000280961.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000631331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000631331.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=ENST00000631331.1;transcript_id=HG00140_ch_T0001646;gene_id=HG00140_ch_G0000585;Parent=HG00140_ch_T0001646;transcript_name=HG00140_ch_T0001646;gene_name=TTTY3B;ID=intron:HG00140_ch_T0001646:1;Name=TTTY3B;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	423746	423849	.	-	.	source_transcript=ENST00000631331.1;source_transcript_name=TTTY3B-201;source_gene=ENSG00000280961.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000280961.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000631331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000631331.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=ENST00000631331.1;transcript_id=HG00140_ch_T0001646;gene_id=HG00140_ch_G0000585;Parent=HG00140_ch_T0001646;transcript_name=HG00140_ch_T0001646;gene_name=TTTY3B;ID=exon:HG00140_ch_T0001646:2;Name=TTTY3B;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	428153	434519	.	-	.	source_gene_common_name=USP9YP12;source_gene=ENSG00000227871.1;alternative_source_transcripts=ENST00000450481.1,ENST00000450481.1;gene_id=HG00140_ch_G0000586;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP12;gene_sources=liftoff;ID=HG00140_ch_G0000586;Name=USP9YP12
HG00140_chrY_random0000005	CAT	transcript	428153	434519	1000	-	.	source_transcript=ENST00000450481.1;source_transcript_name=USP9YP12-201;source_gene=ENSG00000227871.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227871.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450481.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP12;alternative_source_transcripts=ENST00000450481.1,ENST00000450481.1;transcript_id=HG00140_ch_T0001647;gene_id=HG00140_ch_G0000586;Parent=HG00140_ch_G0000586;transcript_name=HG00140_ch_T0001647;gene_name=USP9YP12;ID=HG00140_ch_T0001647;Name=USP9YP12
HG00140_chrY_random0000005	CAT	exon	428153	428248	.	-	.	source_transcript=ENST00000450481.1;source_transcript_name=USP9YP12-201;source_gene=ENSG00000227871.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227871.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP12;alternative_source_transcripts=ENST00000450481.1,ENST00000450481.1;transcript_id=HG00140_ch_T0001647;gene_id=HG00140_ch_G0000586;Parent=HG00140_ch_T0001647;transcript_name=HG00140_ch_T0001647;gene_name=USP9YP12;ID=exon:HG00140_ch_T0001647:0;Name=USP9YP12;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	428249	428629	.	-	.	source_transcript=ENST00000450481.1;source_transcript_name=USP9YP12-201;source_gene=ENSG00000227871.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227871.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP12;alternative_source_transcripts=ENST00000450481.1,ENST00000450481.1;transcript_id=HG00140_ch_T0001647;gene_id=HG00140_ch_G0000586;Parent=HG00140_ch_T0001647;transcript_name=HG00140_ch_T0001647;gene_name=USP9YP12;ID=intron:HG00140_ch_T0001647:0;Name=USP9YP12;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	428630	428817	.	-	.	source_transcript=ENST00000450481.1;source_transcript_name=USP9YP12-201;source_gene=ENSG00000227871.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227871.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP12;alternative_source_transcripts=ENST00000450481.1,ENST00000450481.1;transcript_id=HG00140_ch_T0001647;gene_id=HG00140_ch_G0000586;Parent=HG00140_ch_T0001647;transcript_name=HG00140_ch_T0001647;gene_name=USP9YP12;ID=exon:HG00140_ch_T0001647:1;Name=USP9YP12;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	428818	429172	.	-	.	source_transcript=ENST00000450481.1;source_transcript_name=USP9YP12-201;source_gene=ENSG00000227871.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227871.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP12;alternative_source_transcripts=ENST00000450481.1,ENST00000450481.1;transcript_id=HG00140_ch_T0001647;gene_id=HG00140_ch_G0000586;Parent=HG00140_ch_T0001647;transcript_name=HG00140_ch_T0001647;gene_name=USP9YP12;ID=intron:HG00140_ch_T0001647:1;Name=USP9YP12;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	429173	429326	.	-	.	source_transcript=ENST00000450481.1;source_transcript_name=USP9YP12-201;source_gene=ENSG00000227871.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227871.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP12;alternative_source_transcripts=ENST00000450481.1,ENST00000450481.1;transcript_id=HG00140_ch_T0001647;gene_id=HG00140_ch_G0000586;Parent=HG00140_ch_T0001647;transcript_name=HG00140_ch_T0001647;gene_name=USP9YP12;ID=exon:HG00140_ch_T0001647:2;Name=USP9YP12;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	429327	434387	.	-	.	source_transcript=ENST00000450481.1;source_transcript_name=USP9YP12-201;source_gene=ENSG00000227871.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227871.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP12;alternative_source_transcripts=ENST00000450481.1,ENST00000450481.1;transcript_id=HG00140_ch_T0001647;gene_id=HG00140_ch_G0000586;Parent=HG00140_ch_T0001647;transcript_name=HG00140_ch_T0001647;gene_name=USP9YP12;ID=intron:HG00140_ch_T0001647:2;Name=USP9YP12;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	434388	434519	.	-	.	source_transcript=ENST00000450481.1;source_transcript_name=USP9YP12-201;source_gene=ENSG00000227871.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227871.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000450481.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000450481.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP12;alternative_source_transcripts=ENST00000450481.1,ENST00000450481.1;transcript_id=HG00140_ch_T0001647;gene_id=HG00140_ch_G0000586;Parent=HG00140_ch_T0001647;transcript_name=HG00140_ch_T0001647;gene_name=USP9YP12;ID=exon:HG00140_ch_T0001647:3;Name=USP9YP12;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	428844	428997	.	-	.	source_gene_common_name=RNU1-86P;source_gene=ENSG00000251917.1;alternative_source_transcripts=ENST00000516108.1;gene_id=HG00140_ch_G0000587;gene_biotype=snRNA;gene_name=RNU1-86P;gene_sources=liftoff;ID=HG00140_ch_G0000587;Name=RNU1-86P
HG00140_chrY_random0000005	CAT	transcript	428844	428997	1000	-	.	source_transcript=ENST00000516108.1;source_transcript_name=RNU1-86P-201;source_gene=ENSG00000251917.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000251917.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516108.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516108.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-86P;alternative_source_transcripts=ENST00000516108.1;transcript_id=HG00140_ch_T0001648;gene_id=HG00140_ch_G0000587;Parent=HG00140_ch_G0000587;transcript_name=HG00140_ch_T0001648;gene_name=RNU1-86P;ID=HG00140_ch_T0001648;Name=RNU1-86P
HG00140_chrY_random0000005	CAT	exon	428844	428997	.	-	.	source_transcript=ENST00000516108.1;source_transcript_name=RNU1-86P-201;source_gene=ENSG00000251917.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000251917.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516108.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516108.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-86P;alternative_source_transcripts=ENST00000516108.1;transcript_id=HG00140_ch_T0001648;gene_id=HG00140_ch_G0000587;Parent=HG00140_ch_T0001648;transcript_name=HG00140_ch_T0001648;gene_name=RNU1-86P;ID=exon:HG00140_ch_T0001648:0;Name=RNU1-86P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	438787	442436	.	+	.	source_gene_common_name=RAB9AP5;source_gene=ENSG00000231423.1;alternative_source_transcripts=ENST00000437794.1,ENST00000437794.1;gene_id=HG00140_ch_G0000588;gene_biotype=unprocessed_pseudogene;gene_name=RAB9AP5;gene_sources=liftoff;ID=HG00140_ch_G0000588;Name=RAB9AP5
HG00140_chrY_random0000005	CAT	transcript	438787	442436	1000	+	.	source_transcript=ENST00000437794.1;source_transcript_name=RAB9AP5-201;source_gene=ENSG00000231423.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231423.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437794.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP5;alternative_source_transcripts=ENST00000437794.1,ENST00000437794.1;transcript_id=HG00140_ch_T0001649;gene_id=HG00140_ch_G0000588;Parent=HG00140_ch_G0000588;transcript_name=HG00140_ch_T0001649;gene_name=RAB9AP5;ID=HG00140_ch_T0001649;Name=RAB9AP5
HG00140_chrY_random0000005	CAT	exon	438787	439014	.	+	.	source_transcript=ENST00000437794.1;source_transcript_name=RAB9AP5-201;source_gene=ENSG00000231423.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231423.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437794.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP5;alternative_source_transcripts=ENST00000437794.1,ENST00000437794.1;transcript_id=HG00140_ch_T0001649;gene_id=HG00140_ch_G0000588;Parent=HG00140_ch_T0001649;transcript_name=HG00140_ch_T0001649;gene_name=RAB9AP5;ID=exon:HG00140_ch_T0001649:0;Name=RAB9AP5;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	439015	442067	.	+	.	source_transcript=ENST00000437794.1;source_transcript_name=RAB9AP5-201;source_gene=ENSG00000231423.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231423.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437794.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP5;alternative_source_transcripts=ENST00000437794.1,ENST00000437794.1;transcript_id=HG00140_ch_T0001649;gene_id=HG00140_ch_G0000588;Parent=HG00140_ch_T0001649;transcript_name=HG00140_ch_T0001649;gene_name=RAB9AP5;ID=intron:HG00140_ch_T0001649:0;Name=RAB9AP5;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	442068	442436	.	+	.	source_transcript=ENST00000437794.1;source_transcript_name=RAB9AP5-201;source_gene=ENSG00000231423.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231423.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437794.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437794.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP5;alternative_source_transcripts=ENST00000437794.1,ENST00000437794.1;transcript_id=HG00140_ch_T0001649;gene_id=HG00140_ch_G0000588;Parent=HG00140_ch_T0001649;transcript_name=HG00140_ch_T0001649;gene_name=RAB9AP5;ID=exon:HG00140_ch_T0001649:1;Name=RAB9AP5;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	449782	452912	.	-	.	source_gene_common_name=TRAPPC2P10;source_gene=ENSG00000228465.1;alternative_source_transcripts=ENST00000415662.1;gene_id=HG00140_ch_G0000589;gene_biotype=unprocessed_pseudogene;gene_name=TRAPPC2P10;gene_sources=liftoff;ID=HG00140_ch_G0000589;Name=TRAPPC2P10
HG00140_chrY_random0000005	CAT	transcript	449782	452912	1000	-	.	source_transcript=ENST00000415662.1;source_transcript_name=TRAPPC2P10-201;source_gene=ENSG00000228465.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228465.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415662.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P10;alternative_source_transcripts=ENST00000415662.1;transcript_id=HG00140_ch_T0001650;gene_id=HG00140_ch_G0000589;Parent=HG00140_ch_G0000589;transcript_name=HG00140_ch_T0001650;gene_name=TRAPPC2P10;ID=HG00140_ch_T0001650;Name=TRAPPC2P10
HG00140_chrY_random0000005	CAT	exon	449782	449860	.	-	.	source_transcript=ENST00000415662.1;source_transcript_name=TRAPPC2P10-201;source_gene=ENSG00000228465.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228465.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415662.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P10;alternative_source_transcripts=ENST00000415662.1;transcript_id=HG00140_ch_T0001650;gene_id=HG00140_ch_G0000589;Parent=HG00140_ch_T0001650;transcript_name=HG00140_ch_T0001650;gene_name=TRAPPC2P10;ID=exon:HG00140_ch_T0001650:0;Name=TRAPPC2P10;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	449861	450304	.	-	.	source_transcript=ENST00000415662.1;source_transcript_name=TRAPPC2P10-201;source_gene=ENSG00000228465.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228465.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415662.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P10;alternative_source_transcripts=ENST00000415662.1;transcript_id=HG00140_ch_T0001650;gene_id=HG00140_ch_G0000589;Parent=HG00140_ch_T0001650;transcript_name=HG00140_ch_T0001650;gene_name=TRAPPC2P10;ID=intron:HG00140_ch_T0001650:0;Name=TRAPPC2P10;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	450305	450436	.	-	.	source_transcript=ENST00000415662.1;source_transcript_name=TRAPPC2P10-201;source_gene=ENSG00000228465.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228465.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415662.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P10;alternative_source_transcripts=ENST00000415662.1;transcript_id=HG00140_ch_T0001650;gene_id=HG00140_ch_G0000589;Parent=HG00140_ch_T0001650;transcript_name=HG00140_ch_T0001650;gene_name=TRAPPC2P10;ID=exon:HG00140_ch_T0001650:1;Name=TRAPPC2P10;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	450437	452800	.	-	.	source_transcript=ENST00000415662.1;source_transcript_name=TRAPPC2P10-201;source_gene=ENSG00000228465.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228465.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415662.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P10;alternative_source_transcripts=ENST00000415662.1;transcript_id=HG00140_ch_T0001650;gene_id=HG00140_ch_G0000589;Parent=HG00140_ch_T0001650;transcript_name=HG00140_ch_T0001650;gene_name=TRAPPC2P10;ID=intron:HG00140_ch_T0001650:1;Name=TRAPPC2P10;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	452801	452912	.	-	.	source_transcript=ENST00000415662.1;source_transcript_name=TRAPPC2P10-201;source_gene=ENSG00000228465.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000228465.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415662.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415662.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P10;alternative_source_transcripts=ENST00000415662.1;transcript_id=HG00140_ch_T0001650;gene_id=HG00140_ch_G0000589;Parent=HG00140_ch_T0001650;transcript_name=HG00140_ch_T0001650;gene_name=TRAPPC2P10;ID=exon:HG00140_ch_T0001650:2;Name=TRAPPC2P10;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	454998	477295	.	+	.	source_gene_common_name=OFD1P13Y;source_gene=ENSG00000225287.1;gene_id=HG00140_ch_G0000590;gene_biotype=unprocessed_pseudogene;gene_name=OFD1P13Y;gene_sources=liftoff;ID=HG00140_ch_G0000590;Name=OFD1P13Y
HG00140_chrY_random0000005	CAT	transcript	454998	477295	1000	+	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=HG00140_ch_T0001651;gene_id=HG00140_ch_G0000590;Parent=HG00140_ch_G0000590;transcript_name=HG00140_ch_T0001651;gene_name=OFD1P13Y;ID=HG00140_ch_T0001651;Name=OFD1P13Y
HG00140_chrY_random0000005	CAT	exon	454998	455095	.	+	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=HG00140_ch_T0001651;gene_id=HG00140_ch_G0000590;Parent=HG00140_ch_T0001651;transcript_name=HG00140_ch_T0001651;gene_name=OFD1P13Y;ID=exon:HG00140_ch_T0001651:0;Name=OFD1P13Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	455096	456407	.	+	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=HG00140_ch_T0001651;gene_id=HG00140_ch_G0000590;Parent=HG00140_ch_T0001651;transcript_name=HG00140_ch_T0001651;gene_name=OFD1P13Y;ID=intron:HG00140_ch_T0001651:0;Name=OFD1P13Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	456408	456606	.	+	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=HG00140_ch_T0001651;gene_id=HG00140_ch_G0000590;Parent=HG00140_ch_T0001651;transcript_name=HG00140_ch_T0001651;gene_name=OFD1P13Y;ID=exon:HG00140_ch_T0001651:1;Name=OFD1P13Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	456607	458813	.	+	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=HG00140_ch_T0001651;gene_id=HG00140_ch_G0000590;Parent=HG00140_ch_T0001651;transcript_name=HG00140_ch_T0001651;gene_name=OFD1P13Y;ID=intron:HG00140_ch_T0001651:1;Name=OFD1P13Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	458814	458882	.	+	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=HG00140_ch_T0001651;gene_id=HG00140_ch_G0000590;Parent=HG00140_ch_T0001651;transcript_name=HG00140_ch_T0001651;gene_name=OFD1P13Y;ID=exon:HG00140_ch_T0001651:2;Name=OFD1P13Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	458883	458967	.	+	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=HG00140_ch_T0001651;gene_id=HG00140_ch_G0000590;Parent=HG00140_ch_T0001651;transcript_name=HG00140_ch_T0001651;gene_name=OFD1P13Y;ID=intron:HG00140_ch_T0001651:2;Name=OFD1P13Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	458968	459026	.	+	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=HG00140_ch_T0001651;gene_id=HG00140_ch_G0000590;Parent=HG00140_ch_T0001651;transcript_name=HG00140_ch_T0001651;gene_name=OFD1P13Y;ID=exon:HG00140_ch_T0001651:3;Name=OFD1P13Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	459027	466503	.	+	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=HG00140_ch_T0001651;gene_id=HG00140_ch_G0000590;Parent=HG00140_ch_T0001651;transcript_name=HG00140_ch_T0001651;gene_name=OFD1P13Y;ID=intron:HG00140_ch_T0001651:3;Name=OFD1P13Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	466504	466636	.	+	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=HG00140_ch_T0001651;gene_id=HG00140_ch_G0000590;Parent=HG00140_ch_T0001651;transcript_name=HG00140_ch_T0001651;gene_name=OFD1P13Y;ID=exon:HG00140_ch_T0001651:4;Name=OFD1P13Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	466637	466975	.	+	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=HG00140_ch_T0001651;gene_id=HG00140_ch_G0000590;Parent=HG00140_ch_T0001651;transcript_name=HG00140_ch_T0001651;gene_name=OFD1P13Y;ID=intron:HG00140_ch_T0001651:4;Name=OFD1P13Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	466976	467111	.	+	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=HG00140_ch_T0001651;gene_id=HG00140_ch_G0000590;Parent=HG00140_ch_T0001651;transcript_name=HG00140_ch_T0001651;gene_name=OFD1P13Y;ID=exon:HG00140_ch_T0001651:5;Name=OFD1P13Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	467112	470155	.	+	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=HG00140_ch_T0001651;gene_id=HG00140_ch_G0000590;Parent=HG00140_ch_T0001651;transcript_name=HG00140_ch_T0001651;gene_name=OFD1P13Y;ID=intron:HG00140_ch_T0001651:5;Name=OFD1P13Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	470156	470261	.	+	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=HG00140_ch_T0001651;gene_id=HG00140_ch_G0000590;Parent=HG00140_ch_T0001651;transcript_name=HG00140_ch_T0001651;gene_name=OFD1P13Y;ID=exon:HG00140_ch_T0001651:6;Name=OFD1P13Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	470262	472367	.	+	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=HG00140_ch_T0001651;gene_id=HG00140_ch_G0000590;Parent=HG00140_ch_T0001651;transcript_name=HG00140_ch_T0001651;gene_name=OFD1P13Y;ID=intron:HG00140_ch_T0001651:6;Name=OFD1P13Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	472368	472484	.	+	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=HG00140_ch_T0001651;gene_id=HG00140_ch_G0000590;Parent=HG00140_ch_T0001651;transcript_name=HG00140_ch_T0001651;gene_name=OFD1P13Y;ID=exon:HG00140_ch_T0001651:7;Name=OFD1P13Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	472485	474260	.	+	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=HG00140_ch_T0001651;gene_id=HG00140_ch_G0000590;Parent=HG00140_ch_T0001651;transcript_name=HG00140_ch_T0001651;gene_name=OFD1P13Y;ID=intron:HG00140_ch_T0001651:7;Name=OFD1P13Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	474261	474334	.	+	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=HG00140_ch_T0001651;gene_id=HG00140_ch_G0000590;Parent=HG00140_ch_T0001651;transcript_name=HG00140_ch_T0001651;gene_name=OFD1P13Y;ID=exon:HG00140_ch_T0001651:8;Name=OFD1P13Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	474335	475439	.	+	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=HG00140_ch_T0001651;gene_id=HG00140_ch_G0000590;Parent=HG00140_ch_T0001651;transcript_name=HG00140_ch_T0001651;gene_name=OFD1P13Y;ID=intron:HG00140_ch_T0001651:8;Name=OFD1P13Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	475440	475531	.	+	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=HG00140_ch_T0001651;gene_id=HG00140_ch_G0000590;Parent=HG00140_ch_T0001651;transcript_name=HG00140_ch_T0001651;gene_name=OFD1P13Y;ID=exon:HG00140_ch_T0001651:9;Name=OFD1P13Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	475532	477146	.	+	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=HG00140_ch_T0001651;gene_id=HG00140_ch_G0000590;Parent=HG00140_ch_T0001651;transcript_name=HG00140_ch_T0001651;gene_name=OFD1P13Y;ID=intron:HG00140_ch_T0001651:9;Name=OFD1P13Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	477147	477295	.	+	.	source_transcript=ENST00000431179.1;source_transcript_name=OFD1P13Y-201;source_gene=ENSG00000225287.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225287.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431179.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431179.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P13Y;transcript_id=HG00140_ch_T0001651;gene_id=HG00140_ch_G0000590;Parent=HG00140_ch_T0001651;transcript_name=HG00140_ch_T0001651;gene_name=OFD1P13Y;ID=exon:HG00140_ch_T0001651:10;Name=OFD1P13Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	489121	489447	.	-	.	source_gene_common_name=ELOCP34;source_gene=ENSG00000270535.1;alternative_source_transcripts=ENST00000440624.1;gene_id=HG00140_ch_G0000591;gene_biotype=processed_pseudogene;gene_name=ELOCP34;gene_sources=liftoff;ID=HG00140_ch_G0000591;Name=ELOCP34
HG00140_chrY_random0000005	CAT	transcript	489121	489447	1000	-	.	source_transcript=ENST00000604436.1;source_transcript_name=ELOCP34-201;source_gene=ENSG00000270535.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270535.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604436.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP34;alternative_source_transcripts=ENST00000440624.1;transcript_id=HG00140_ch_T0001652;gene_id=HG00140_ch_G0000591;Parent=HG00140_ch_G0000591;transcript_name=HG00140_ch_T0001652;gene_name=ELOCP34;ID=HG00140_ch_T0001652;Name=ELOCP34
HG00140_chrY_random0000005	CAT	exon	489121	489447	.	-	.	source_transcript=ENST00000604436.1;source_transcript_name=ELOCP34-201;source_gene=ENSG00000270535.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000270535.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000604436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000604436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP34;alternative_source_transcripts=ENST00000440624.1;transcript_id=HG00140_ch_T0001652;gene_id=HG00140_ch_G0000591;Parent=HG00140_ch_T0001652;transcript_name=HG00140_ch_T0001652;gene_name=ELOCP34;ID=exon:HG00140_ch_T0001652:0;Name=ELOCP34;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	527446	530186	.	-	.	source_gene_common_name=CDY1B;source_gene=ENSG00000172352.5;alternative_source_transcripts=ENST00000306882.4;gene_id=HG00140_ch_G0000592;gene_biotype=protein_coding;gene_name=CDY1B;gene_sources=liftoff;ID=HG00140_ch_G0000592;Name=CDY1B
HG00140_chrY_random0000005	CAT	transcript	527446	530186	100	-	.	source_transcript=ENST00000306882.4;source_transcript_name=CDY1B-201;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306882.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000306882.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=ENST00000306882.4;transcript_id=HG00140_ch_T0001653;gene_id=HG00140_ch_G0000592;Parent=HG00140_ch_G0000592;transcript_name=HG00140_ch_T0001653;gene_name=CDY1B;ID=HG00140_ch_T0001653;Name=CDY1B
HG00140_chrY_random0000005	CAT	exon	527446	527893	.	-	.	source_transcript=ENST00000306882.4;source_transcript_name=CDY1B-201;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306882.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000306882.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=ENST00000306882.4;transcript_id=HG00140_ch_T0001653;gene_id=HG00140_ch_G0000592;Parent=HG00140_ch_T0001653;transcript_name=HG00140_ch_T0001653;gene_name=CDY1B;ID=exon:HG00140_ch_T0001653:0;Name=CDY1B;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	527821	527893	.	-	1	source_transcript=ENST00000306882.4;source_transcript_name=CDY1B-201;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306882.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000306882.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=ENST00000306882.4;transcript_id=HG00140_ch_T0001653;gene_id=HG00140_ch_G0000592;Parent=HG00140_ch_T0001653;transcript_name=HG00140_ch_T0001653;gene_name=CDY1B;ID=CDS:HG00140_ch_T0001653:0;Name=CDY1B;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	stop_codon	527821	527823	.	-	0	source_transcript=ENST00000306882.4;source_transcript_name=CDY1B-201;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306882.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000306882.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=ENST00000306882.4;transcript_id=HG00140_ch_T0001653;gene_id=HG00140_ch_G0000592;Parent=HG00140_ch_T0001653;transcript_name=HG00140_ch_T0001653;gene_name=CDY1B;ID=stop_codon:HG00140_ch_T0001653;Name=CDY1B;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	527894	528313	.	-	.	source_transcript=ENST00000306882.4;source_transcript_name=CDY1B-201;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306882.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000306882.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=ENST00000306882.4;transcript_id=HG00140_ch_T0001653;gene_id=HG00140_ch_G0000592;Parent=HG00140_ch_T0001653;transcript_name=HG00140_ch_T0001653;gene_name=CDY1B;ID=intron:HG00140_ch_T0001653:0;Name=CDY1B;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	528314	530186	.	-	.	source_transcript=ENST00000306882.4;source_transcript_name=CDY1B-201;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306882.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000306882.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=ENST00000306882.4;transcript_id=HG00140_ch_T0001653;gene_id=HG00140_ch_G0000592;Parent=HG00140_ch_T0001653;transcript_name=HG00140_ch_T0001653;gene_name=CDY1B;ID=exon:HG00140_ch_T0001653:1;Name=CDY1B;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	528314	529905	.	-	0	source_transcript=ENST00000306882.4;source_transcript_name=CDY1B-201;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306882.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000306882.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=ENST00000306882.4;transcript_id=HG00140_ch_T0001653;gene_id=HG00140_ch_G0000592;Parent=HG00140_ch_T0001653;transcript_name=HG00140_ch_T0001653;gene_name=CDY1B;ID=CDS:HG00140_ch_T0001653:1;Name=CDY1B;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	start_codon	529903	529905	.	-	0	source_transcript=ENST00000306882.4;source_transcript_name=CDY1B-201;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306882.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000306882.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=ENST00000306882.4;transcript_id=HG00140_ch_T0001653;gene_id=HG00140_ch_G0000592;Parent=HG00140_ch_T0001653;transcript_name=HG00140_ch_T0001653;gene_name=CDY1B;ID=start_codon:HG00140_ch_T0001653;Name=CDY1B;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	528010	530236	100	-	.	source_transcript=ENST00000382407.1;source_transcript_name=CDY1B-202;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382407.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382407.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=ENST00000382407.1;transcript_id=HG00140_ch_T0001654;gene_id=HG00140_ch_G0000592;Parent=HG00140_ch_G0000592;transcript_name=HG00140_ch_T0001654;gene_name=CDY1B;ID=HG00140_ch_T0001654;Name=CDY1B
HG00140_chrY_random0000005	CAT	exon	528010	530236	.	-	.	source_transcript=ENST00000382407.1;source_transcript_name=CDY1B-202;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382407.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382407.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=ENST00000382407.1;transcript_id=HG00140_ch_T0001654;gene_id=HG00140_ch_G0000592;Parent=HG00140_ch_T0001654;transcript_name=HG00140_ch_T0001654;gene_name=CDY1B;ID=exon:HG00140_ch_T0001654:0;Name=CDY1B;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	528283	529905	.	-	0	source_transcript=ENST00000382407.1;source_transcript_name=CDY1B-202;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382407.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382407.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=ENST00000382407.1;transcript_id=HG00140_ch_T0001654;gene_id=HG00140_ch_G0000592;Parent=HG00140_ch_T0001654;transcript_name=HG00140_ch_T0001654;gene_name=CDY1B;ID=CDS:HG00140_ch_T0001654:0;Name=CDY1B;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	stop_codon	528283	528285	.	-	0	source_transcript=ENST00000382407.1;source_transcript_name=CDY1B-202;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382407.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382407.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=ENST00000382407.1;transcript_id=HG00140_ch_T0001654;gene_id=HG00140_ch_G0000592;Parent=HG00140_ch_T0001654;transcript_name=HG00140_ch_T0001654;gene_name=CDY1B;ID=stop_codon:HG00140_ch_T0001654;Name=CDY1B;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	start_codon	529903	529905	.	-	0	source_transcript=ENST00000382407.1;source_transcript_name=CDY1B-202;source_gene=ENSG00000172352.5;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172352.5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382407.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382407.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=ENST00000382407.1;transcript_id=HG00140_ch_T0001654;gene_id=HG00140_ch_G0000592;Parent=HG00140_ch_T0001654;transcript_name=HG00140_ch_T0001654;gene_name=CDY1B;ID=start_codon:HG00140_ch_T0001654;Name=CDY1B;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	532095	533704	.	-	.	source_gene_common_name=CDY17P;source_gene=ENSG00000231375.1;alternative_source_transcripts=ENST00000414121.1;gene_id=HG00140_ch_G0000593;gene_biotype=unprocessed_pseudogene;gene_name=CDY17P;gene_sources=liftoff;ID=HG00140_ch_G0000593;Name=CDY17P
HG00140_chrY_random0000005	CAT	transcript	532095	533704	1000	-	.	source_transcript=ENST00000414121.1;source_transcript_name=CDY17P-201;source_gene=ENSG00000231375.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231375.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414121.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414121.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY17P;alternative_source_transcripts=ENST00000414121.1;transcript_id=HG00140_ch_T0001655;gene_id=HG00140_ch_G0000593;Parent=HG00140_ch_G0000593;transcript_name=HG00140_ch_T0001655;gene_name=CDY17P;ID=HG00140_ch_T0001655;Name=CDY17P
HG00140_chrY_random0000005	CAT	exon	532095	533310	.	-	.	source_transcript=ENST00000414121.1;source_transcript_name=CDY17P-201;source_gene=ENSG00000231375.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231375.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414121.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414121.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY17P;alternative_source_transcripts=ENST00000414121.1;transcript_id=HG00140_ch_T0001655;gene_id=HG00140_ch_G0000593;Parent=HG00140_ch_T0001655;transcript_name=HG00140_ch_T0001655;gene_name=CDY17P;ID=exon:HG00140_ch_T0001655:0;Name=CDY17P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	533311	533638	.	-	.	source_transcript=ENST00000414121.1;source_transcript_name=CDY17P-201;source_gene=ENSG00000231375.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231375.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414121.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414121.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY17P;alternative_source_transcripts=ENST00000414121.1;transcript_id=HG00140_ch_T0001655;gene_id=HG00140_ch_G0000593;Parent=HG00140_ch_T0001655;transcript_name=HG00140_ch_T0001655;gene_name=CDY17P;ID=intron:HG00140_ch_T0001655:0;Name=CDY17P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	533639	533704	.	-	.	source_transcript=ENST00000414121.1;source_transcript_name=CDY17P-201;source_gene=ENSG00000231375.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231375.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000414121.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414121.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY17P;alternative_source_transcripts=ENST00000414121.1;transcript_id=HG00140_ch_T0001655;gene_id=HG00140_ch_G0000593;Parent=HG00140_ch_T0001655;transcript_name=HG00140_ch_T0001655;gene_name=CDY17P;ID=exon:HG00140_ch_T0001655:1;Name=CDY17P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	560015	562028	.	+	.	source_gene_common_name=USP9YP35;source_gene=ENSG00000237467.1;alternative_source_transcripts=ENST00000435696.1;gene_id=HG00140_ch_G0000594;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP35;gene_sources=liftoff;ID=HG00140_ch_G0000594;Name=USP9YP35
HG00140_chrY_random0000005	CAT	transcript	560015	562028	1000	+	.	source_transcript=ENST00000435696.1;source_transcript_name=USP9YP35-201;source_gene=ENSG00000237467.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237467.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435696.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP35;alternative_source_transcripts=ENST00000435696.1;transcript_id=HG00140_ch_T0001656;gene_id=HG00140_ch_G0000594;Parent=HG00140_ch_G0000594;transcript_name=HG00140_ch_T0001656;gene_name=USP9YP35;ID=HG00140_ch_T0001656;Name=USP9YP35
HG00140_chrY_random0000005	CAT	exon	560015	560236	.	+	.	source_transcript=ENST00000435696.1;source_transcript_name=USP9YP35-201;source_gene=ENSG00000237467.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237467.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP35;alternative_source_transcripts=ENST00000435696.1;transcript_id=HG00140_ch_T0001656;gene_id=HG00140_ch_G0000594;Parent=HG00140_ch_T0001656;transcript_name=HG00140_ch_T0001656;gene_name=USP9YP35;ID=exon:HG00140_ch_T0001656:0;Name=USP9YP35;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	560237	561838	.	+	.	source_transcript=ENST00000435696.1;source_transcript_name=USP9YP35-201;source_gene=ENSG00000237467.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237467.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP35;alternative_source_transcripts=ENST00000435696.1;transcript_id=HG00140_ch_T0001656;gene_id=HG00140_ch_G0000594;Parent=HG00140_ch_T0001656;transcript_name=HG00140_ch_T0001656;gene_name=USP9YP35;ID=intron:HG00140_ch_T0001656:0;Name=USP9YP35;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	561839	562028	.	+	.	source_transcript=ENST00000435696.1;source_transcript_name=USP9YP35-201;source_gene=ENSG00000237467.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237467.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000435696.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000435696.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP35;alternative_source_transcripts=ENST00000435696.1;transcript_id=HG00140_ch_T0001656;gene_id=HG00140_ch_G0000594;Parent=HG00140_ch_T0001656;transcript_name=HG00140_ch_T0001656;gene_name=USP9YP35;ID=exon:HG00140_ch_T0001656:1;Name=USP9YP35;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	563920	572561	.	-	.	source_gene_common_name=USP9YP31;source_gene=ENSG00000229250.1;alternative_source_transcripts=ENST00000431405.1;gene_id=HG00140_ch_G0000595;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP31;gene_sources=liftoff;ID=HG00140_ch_G0000595;Name=USP9YP31
HG00140_chrY_random0000005	CAT	transcript	563920	572561	1000	-	.	source_transcript=ENST00000431405.1;source_transcript_name=USP9YP31-201;source_gene=ENSG00000229250.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229250.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431405.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP31;alternative_source_transcripts=ENST00000431405.1;transcript_id=HG00140_ch_T0001657;gene_id=HG00140_ch_G0000595;Parent=HG00140_ch_G0000595;transcript_name=HG00140_ch_T0001657;gene_name=USP9YP31;ID=HG00140_ch_T0001657;Name=USP9YP31
HG00140_chrY_random0000005	CAT	exon	563920	564039	.	-	.	source_transcript=ENST00000431405.1;source_transcript_name=USP9YP31-201;source_gene=ENSG00000229250.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229250.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431405.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP31;alternative_source_transcripts=ENST00000431405.1;transcript_id=HG00140_ch_T0001657;gene_id=HG00140_ch_G0000595;Parent=HG00140_ch_T0001657;transcript_name=HG00140_ch_T0001657;gene_name=USP9YP31;ID=exon:HG00140_ch_T0001657:0;Name=USP9YP31;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	564040	566042	.	-	.	source_transcript=ENST00000431405.1;source_transcript_name=USP9YP31-201;source_gene=ENSG00000229250.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229250.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431405.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP31;alternative_source_transcripts=ENST00000431405.1;transcript_id=HG00140_ch_T0001657;gene_id=HG00140_ch_G0000595;Parent=HG00140_ch_T0001657;transcript_name=HG00140_ch_T0001657;gene_name=USP9YP31;ID=intron:HG00140_ch_T0001657:0;Name=USP9YP31;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	566043	566171	.	-	.	source_transcript=ENST00000431405.1;source_transcript_name=USP9YP31-201;source_gene=ENSG00000229250.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229250.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431405.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP31;alternative_source_transcripts=ENST00000431405.1;transcript_id=HG00140_ch_T0001657;gene_id=HG00140_ch_G0000595;Parent=HG00140_ch_T0001657;transcript_name=HG00140_ch_T0001657;gene_name=USP9YP31;ID=exon:HG00140_ch_T0001657:1;Name=USP9YP31;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	566172	567986	.	-	.	source_transcript=ENST00000431405.1;source_transcript_name=USP9YP31-201;source_gene=ENSG00000229250.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229250.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431405.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP31;alternative_source_transcripts=ENST00000431405.1;transcript_id=HG00140_ch_T0001657;gene_id=HG00140_ch_G0000595;Parent=HG00140_ch_T0001657;transcript_name=HG00140_ch_T0001657;gene_name=USP9YP31;ID=intron:HG00140_ch_T0001657:1;Name=USP9YP31;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	567987	568176	.	-	.	source_transcript=ENST00000431405.1;source_transcript_name=USP9YP31-201;source_gene=ENSG00000229250.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229250.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431405.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP31;alternative_source_transcripts=ENST00000431405.1;transcript_id=HG00140_ch_T0001657;gene_id=HG00140_ch_G0000595;Parent=HG00140_ch_T0001657;transcript_name=HG00140_ch_T0001657;gene_name=USP9YP31;ID=exon:HG00140_ch_T0001657:2;Name=USP9YP31;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	568177	569974	.	-	.	source_transcript=ENST00000431405.1;source_transcript_name=USP9YP31-201;source_gene=ENSG00000229250.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229250.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431405.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP31;alternative_source_transcripts=ENST00000431405.1;transcript_id=HG00140_ch_T0001657;gene_id=HG00140_ch_G0000595;Parent=HG00140_ch_T0001657;transcript_name=HG00140_ch_T0001657;gene_name=USP9YP31;ID=intron:HG00140_ch_T0001657:2;Name=USP9YP31;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	569975	570194	.	-	.	source_transcript=ENST00000431405.1;source_transcript_name=USP9YP31-201;source_gene=ENSG00000229250.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229250.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431405.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP31;alternative_source_transcripts=ENST00000431405.1;transcript_id=HG00140_ch_T0001657;gene_id=HG00140_ch_G0000595;Parent=HG00140_ch_T0001657;transcript_name=HG00140_ch_T0001657;gene_name=USP9YP31;ID=exon:HG00140_ch_T0001657:3;Name=USP9YP31;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	570195	572339	.	-	.	source_transcript=ENST00000431405.1;source_transcript_name=USP9YP31-201;source_gene=ENSG00000229250.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229250.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431405.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP31;alternative_source_transcripts=ENST00000431405.1;transcript_id=HG00140_ch_T0001657;gene_id=HG00140_ch_G0000595;Parent=HG00140_ch_T0001657;transcript_name=HG00140_ch_T0001657;gene_name=USP9YP31;ID=intron:HG00140_ch_T0001657:3;Name=USP9YP31;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	572340	572561	.	-	.	source_transcript=ENST00000431405.1;source_transcript_name=USP9YP31-201;source_gene=ENSG00000229250.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229250.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000431405.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000431405.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP31;alternative_source_transcripts=ENST00000431405.1;transcript_id=HG00140_ch_T0001657;gene_id=HG00140_ch_G0000595;Parent=HG00140_ch_T0001657;transcript_name=HG00140_ch_T0001657;gene_name=USP9YP31;ID=exon:HG00140_ch_T0001657:4;Name=USP9YP31;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	586323	588234	.	+	.	source_gene_common_name=CDY18P;source_gene=ENSG00000232205.1;alternative_source_transcripts=ENST00000438294.1;gene_id=HG00140_ch_G0000596;gene_biotype=unprocessed_pseudogene;gene_name=CDY18P;gene_sources=liftoff;ID=HG00140_ch_G0000596;Name=CDY18P
HG00140_chrY_random0000005	CAT	transcript	586323	588234	1000	+	.	source_transcript=ENST00000438294.1;source_transcript_name=CDY18P-201;source_gene=ENSG00000232205.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232205.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000438294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438294.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY18P;alternative_source_transcripts=ENST00000438294.1;transcript_id=HG00140_ch_T0001658;gene_id=HG00140_ch_G0000596;Parent=HG00140_ch_G0000596;transcript_name=HG00140_ch_T0001658;gene_name=CDY18P;ID=HG00140_ch_T0001658;Name=CDY18P
HG00140_chrY_random0000005	CAT	exon	586323	586516	.	+	.	source_transcript=ENST00000438294.1;source_transcript_name=CDY18P-201;source_gene=ENSG00000232205.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232205.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000438294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY18P;alternative_source_transcripts=ENST00000438294.1;transcript_id=HG00140_ch_T0001658;gene_id=HG00140_ch_G0000596;Parent=HG00140_ch_T0001658;transcript_name=HG00140_ch_T0001658;gene_name=CDY18P;ID=exon:HG00140_ch_T0001658:0;Name=CDY18P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	586517	586819	.	+	.	source_transcript=ENST00000438294.1;source_transcript_name=CDY18P-201;source_gene=ENSG00000232205.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232205.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000438294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY18P;alternative_source_transcripts=ENST00000438294.1;transcript_id=HG00140_ch_T0001658;gene_id=HG00140_ch_G0000596;Parent=HG00140_ch_T0001658;transcript_name=HG00140_ch_T0001658;gene_name=CDY18P;ID=intron:HG00140_ch_T0001658:0;Name=CDY18P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	586820	588234	.	+	.	source_transcript=ENST00000438294.1;source_transcript_name=CDY18P-201;source_gene=ENSG00000232205.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232205.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000438294.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438294.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY18P;alternative_source_transcripts=ENST00000438294.1;transcript_id=HG00140_ch_T0001658;gene_id=HG00140_ch_G0000596;Parent=HG00140_ch_T0001658;transcript_name=HG00140_ch_T0001658;gene_name=CDY18P;ID=exon:HG00140_ch_T0001658:1;Name=CDY18P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	619600	635580	.	+	.	source_gene_common_name=ENSG00000299288;source_gene=ENSG00000299288.1;gene_id=HG00140_ch_G0000597;gene_biotype=lncRNA;gene_name=ENSG00000299288;gene_sources=liftoff;ID=HG00140_ch_G0000597;Name=ENSG00000299288
HG00140_chrY_random0000005	CAT	transcript	619600	634997	1000	+	.	source_transcript=ENST00000762329.1;source_transcript_name=ENST00000762329;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762329.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001659;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_G0000597;transcript_name=HG00140_ch_T0001659;gene_name=ENSG00000299288;ID=HG00140_ch_T0001659;Name=ENSG00000299288
HG00140_chrY_random0000005	CAT	exon	619600	619704	.	+	.	source_transcript=ENST00000762329.1;source_transcript_name=ENST00000762329;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001659;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001659;transcript_name=HG00140_ch_T0001659;gene_name=ENSG00000299288;ID=exon:HG00140_ch_T0001659:0;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	619705	624571	.	+	.	source_transcript=ENST00000762329.1;source_transcript_name=ENST00000762329;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001659;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001659;transcript_name=HG00140_ch_T0001659;gene_name=ENSG00000299288;ID=intron:HG00140_ch_T0001659:0;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	624572	624709	.	+	.	source_transcript=ENST00000762329.1;source_transcript_name=ENST00000762329;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001659;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001659;transcript_name=HG00140_ch_T0001659;gene_name=ENSG00000299288;ID=exon:HG00140_ch_T0001659:1;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	624710	628247	.	+	.	source_transcript=ENST00000762329.1;source_transcript_name=ENST00000762329;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001659;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001659;transcript_name=HG00140_ch_T0001659;gene_name=ENSG00000299288;ID=intron:HG00140_ch_T0001659:1;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	628248	628332	.	+	.	source_transcript=ENST00000762329.1;source_transcript_name=ENST00000762329;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001659;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001659;transcript_name=HG00140_ch_T0001659;gene_name=ENSG00000299288;ID=exon:HG00140_ch_T0001659:2;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	628333	634561	.	+	.	source_transcript=ENST00000762329.1;source_transcript_name=ENST00000762329;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001659;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001659;transcript_name=HG00140_ch_T0001659;gene_name=ENSG00000299288;ID=intron:HG00140_ch_T0001659:2;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	634562	634997	.	+	.	source_transcript=ENST00000762329.1;source_transcript_name=ENST00000762329;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762329.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762329.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001659;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001659;transcript_name=HG00140_ch_T0001659;gene_name=ENSG00000299288;ID=exon:HG00140_ch_T0001659:3;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	619600	634997	1000	+	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001660;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_G0000597;transcript_name=HG00140_ch_T0001660;gene_name=ENSG00000299288;ID=HG00140_ch_T0001660;Name=ENSG00000299288
HG00140_chrY_random0000005	CAT	exon	619600	619704	.	+	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001660;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001660;transcript_name=HG00140_ch_T0001660;gene_name=ENSG00000299288;ID=exon:HG00140_ch_T0001660:0;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	619705	620452	.	+	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001660;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001660;transcript_name=HG00140_ch_T0001660;gene_name=ENSG00000299288;ID=intron:HG00140_ch_T0001660:0;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	620453	620615	.	+	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001660;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001660;transcript_name=HG00140_ch_T0001660;gene_name=ENSG00000299288;ID=exon:HG00140_ch_T0001660:1;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	620616	624571	.	+	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001660;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001660;transcript_name=HG00140_ch_T0001660;gene_name=ENSG00000299288;ID=intron:HG00140_ch_T0001660:1;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	624572	624709	.	+	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001660;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001660;transcript_name=HG00140_ch_T0001660;gene_name=ENSG00000299288;ID=exon:HG00140_ch_T0001660:2;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	624710	627069	.	+	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001660;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001660;transcript_name=HG00140_ch_T0001660;gene_name=ENSG00000299288;ID=intron:HG00140_ch_T0001660:2;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	627070	627154	.	+	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001660;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001660;transcript_name=HG00140_ch_T0001660;gene_name=ENSG00000299288;ID=exon:HG00140_ch_T0001660:3;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	627155	628247	.	+	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001660;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001660;transcript_name=HG00140_ch_T0001660;gene_name=ENSG00000299288;ID=intron:HG00140_ch_T0001660:3;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	628248	628332	.	+	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001660;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001660;transcript_name=HG00140_ch_T0001660;gene_name=ENSG00000299288;ID=exon:HG00140_ch_T0001660:4;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	628333	634561	.	+	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001660;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001660;transcript_name=HG00140_ch_T0001660;gene_name=ENSG00000299288;ID=intron:HG00140_ch_T0001660:4;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	634562	634997	.	+	.	source_transcript=ENST00000762330.1;source_transcript_name=ENST00000762330;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762330.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762330.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001660;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001660;transcript_name=HG00140_ch_T0001660;gene_name=ENSG00000299288;ID=exon:HG00140_ch_T0001660:5;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	619600	634997	1000	+	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001661;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_G0000597;transcript_name=HG00140_ch_T0001661;gene_name=ENSG00000299288;ID=HG00140_ch_T0001661;Name=ENSG00000299288
HG00140_chrY_random0000005	CAT	exon	619600	619704	.	+	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001661;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001661;transcript_name=HG00140_ch_T0001661;gene_name=ENSG00000299288;ID=exon:HG00140_ch_T0001661:0;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	619705	620452	.	+	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001661;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001661;transcript_name=HG00140_ch_T0001661;gene_name=ENSG00000299288;ID=intron:HG00140_ch_T0001661:0;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	620453	620615	.	+	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001661;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001661;transcript_name=HG00140_ch_T0001661;gene_name=ENSG00000299288;ID=exon:HG00140_ch_T0001661:1;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	620616	624571	.	+	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001661;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001661;transcript_name=HG00140_ch_T0001661;gene_name=ENSG00000299288;ID=intron:HG00140_ch_T0001661:1;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	624572	624693	.	+	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001661;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001661;transcript_name=HG00140_ch_T0001661;gene_name=ENSG00000299288;ID=exon:HG00140_ch_T0001661:2;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	624694	627069	.	+	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001661;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001661;transcript_name=HG00140_ch_T0001661;gene_name=ENSG00000299288;ID=intron:HG00140_ch_T0001661:2;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	627070	627154	.	+	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001661;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001661;transcript_name=HG00140_ch_T0001661;gene_name=ENSG00000299288;ID=exon:HG00140_ch_T0001661:3;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	627155	628247	.	+	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001661;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001661;transcript_name=HG00140_ch_T0001661;gene_name=ENSG00000299288;ID=intron:HG00140_ch_T0001661:3;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	628248	628332	.	+	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001661;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001661;transcript_name=HG00140_ch_T0001661;gene_name=ENSG00000299288;ID=exon:HG00140_ch_T0001661:4;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	628333	634561	.	+	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001661;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001661;transcript_name=HG00140_ch_T0001661;gene_name=ENSG00000299288;ID=intron:HG00140_ch_T0001661:4;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	634562	634997	.	+	.	source_transcript=ENST00000762328.1;source_transcript_name=ENST00000762328;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762328.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762328.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001661;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001661;transcript_name=HG00140_ch_T0001661;gene_name=ENSG00000299288;ID=exon:HG00140_ch_T0001661:5;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	619607	634984	1000	+	.	source_transcript=ENST00000762331.1;source_transcript_name=ENST00000762331;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762331.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001662;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_G0000597;transcript_name=HG00140_ch_T0001662;gene_name=ENSG00000299288;ID=HG00140_ch_T0001662;Name=ENSG00000299288
HG00140_chrY_random0000005	CAT	exon	619607	619704	.	+	.	source_transcript=ENST00000762331.1;source_transcript_name=ENST00000762331;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001662;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001662;transcript_name=HG00140_ch_T0001662;gene_name=ENSG00000299288;ID=exon:HG00140_ch_T0001662:0;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	619705	620452	.	+	.	source_transcript=ENST00000762331.1;source_transcript_name=ENST00000762331;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001662;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001662;transcript_name=HG00140_ch_T0001662;gene_name=ENSG00000299288;ID=intron:HG00140_ch_T0001662:0;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	620453	620615	.	+	.	source_transcript=ENST00000762331.1;source_transcript_name=ENST00000762331;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001662;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001662;transcript_name=HG00140_ch_T0001662;gene_name=ENSG00000299288;ID=exon:HG00140_ch_T0001662:1;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	620616	624571	.	+	.	source_transcript=ENST00000762331.1;source_transcript_name=ENST00000762331;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001662;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001662;transcript_name=HG00140_ch_T0001662;gene_name=ENSG00000299288;ID=intron:HG00140_ch_T0001662:1;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	624572	624709	.	+	.	source_transcript=ENST00000762331.1;source_transcript_name=ENST00000762331;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001662;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001662;transcript_name=HG00140_ch_T0001662;gene_name=ENSG00000299288;ID=exon:HG00140_ch_T0001662:2;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	624710	628247	.	+	.	source_transcript=ENST00000762331.1;source_transcript_name=ENST00000762331;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001662;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001662;transcript_name=HG00140_ch_T0001662;gene_name=ENSG00000299288;ID=intron:HG00140_ch_T0001662:2;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	628248	628332	.	+	.	source_transcript=ENST00000762331.1;source_transcript_name=ENST00000762331;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001662;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001662;transcript_name=HG00140_ch_T0001662;gene_name=ENSG00000299288;ID=exon:HG00140_ch_T0001662:3;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	628333	634561	.	+	.	source_transcript=ENST00000762331.1;source_transcript_name=ENST00000762331;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001662;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001662;transcript_name=HG00140_ch_T0001662;gene_name=ENSG00000299288;ID=intron:HG00140_ch_T0001662:3;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	634562	634984	.	+	.	source_transcript=ENST00000762331.1;source_transcript_name=ENST00000762331;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762331.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762331.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001662;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001662;transcript_name=HG00140_ch_T0001662;gene_name=ENSG00000299288;ID=exon:HG00140_ch_T0001662:4;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	620155	635580	1000	+	.	source_transcript=ENST00000762327.1;source_transcript_name=ENST00000762327;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762327.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001663;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_G0000597;transcript_name=HG00140_ch_T0001663;gene_name=ENSG00000299288;ID=HG00140_ch_T0001663;Name=ENSG00000299288
HG00140_chrY_random0000005	CAT	exon	620155	620615	.	+	.	source_transcript=ENST00000762327.1;source_transcript_name=ENST00000762327;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001663;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001663;transcript_name=HG00140_ch_T0001663;gene_name=ENSG00000299288;ID=exon:HG00140_ch_T0001663:0;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	620616	624571	.	+	.	source_transcript=ENST00000762327.1;source_transcript_name=ENST00000762327;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001663;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001663;transcript_name=HG00140_ch_T0001663;gene_name=ENSG00000299288;ID=intron:HG00140_ch_T0001663:0;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	624572	624693	.	+	.	source_transcript=ENST00000762327.1;source_transcript_name=ENST00000762327;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001663;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001663;transcript_name=HG00140_ch_T0001663;gene_name=ENSG00000299288;ID=exon:HG00140_ch_T0001663:1;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	624694	627069	.	+	.	source_transcript=ENST00000762327.1;source_transcript_name=ENST00000762327;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001663;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001663;transcript_name=HG00140_ch_T0001663;gene_name=ENSG00000299288;ID=intron:HG00140_ch_T0001663:1;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	627070	627154	.	+	.	source_transcript=ENST00000762327.1;source_transcript_name=ENST00000762327;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001663;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001663;transcript_name=HG00140_ch_T0001663;gene_name=ENSG00000299288;ID=exon:HG00140_ch_T0001663:2;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	627155	628247	.	+	.	source_transcript=ENST00000762327.1;source_transcript_name=ENST00000762327;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001663;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001663;transcript_name=HG00140_ch_T0001663;gene_name=ENSG00000299288;ID=intron:HG00140_ch_T0001663:2;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	628248	628332	.	+	.	source_transcript=ENST00000762327.1;source_transcript_name=ENST00000762327;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001663;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001663;transcript_name=HG00140_ch_T0001663;gene_name=ENSG00000299288;ID=exon:HG00140_ch_T0001663:3;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	628333	634561	.	+	.	source_transcript=ENST00000762327.1;source_transcript_name=ENST00000762327;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001663;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001663;transcript_name=HG00140_ch_T0001663;gene_name=ENSG00000299288;ID=intron:HG00140_ch_T0001663:3;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	634562	635580	.	+	.	source_transcript=ENST00000762327.1;source_transcript_name=ENST00000762327;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762327.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762327.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001663;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001663;transcript_name=HG00140_ch_T0001663;gene_name=ENSG00000299288;ID=exon:HG00140_ch_T0001663:4;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	620204	634984	1000	+	.	source_transcript=ENST00000762333.1;source_transcript_name=ENST00000762333;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762333.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001664;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_G0000597;transcript_name=HG00140_ch_T0001664;gene_name=ENSG00000299288;ID=HG00140_ch_T0001664;Name=ENSG00000299288
HG00140_chrY_random0000005	CAT	exon	620204	620615	.	+	.	source_transcript=ENST00000762333.1;source_transcript_name=ENST00000762333;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001664;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001664;transcript_name=HG00140_ch_T0001664;gene_name=ENSG00000299288;ID=exon:HG00140_ch_T0001664:0;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	620616	624571	.	+	.	source_transcript=ENST00000762333.1;source_transcript_name=ENST00000762333;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001664;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001664;transcript_name=HG00140_ch_T0001664;gene_name=ENSG00000299288;ID=intron:HG00140_ch_T0001664:0;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	624572	624693	.	+	.	source_transcript=ENST00000762333.1;source_transcript_name=ENST00000762333;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001664;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001664;transcript_name=HG00140_ch_T0001664;gene_name=ENSG00000299288;ID=exon:HG00140_ch_T0001664:1;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	624694	628247	.	+	.	source_transcript=ENST00000762333.1;source_transcript_name=ENST00000762333;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001664;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001664;transcript_name=HG00140_ch_T0001664;gene_name=ENSG00000299288;ID=intron:HG00140_ch_T0001664:1;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	628248	628332	.	+	.	source_transcript=ENST00000762333.1;source_transcript_name=ENST00000762333;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001664;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001664;transcript_name=HG00140_ch_T0001664;gene_name=ENSG00000299288;ID=exon:HG00140_ch_T0001664:2;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	628333	634561	.	+	.	source_transcript=ENST00000762333.1;source_transcript_name=ENST00000762333;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001664;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001664;transcript_name=HG00140_ch_T0001664;gene_name=ENSG00000299288;ID=intron:HG00140_ch_T0001664:2;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	634562	634984	.	+	.	source_transcript=ENST00000762333.1;source_transcript_name=ENST00000762333;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001664;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001664;transcript_name=HG00140_ch_T0001664;gene_name=ENSG00000299288;ID=exon:HG00140_ch_T0001664:3;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	620380	635580	1000	+	.	source_transcript=ENST00000762332.1;source_transcript_name=ENST00000762332;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762332.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001665;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_G0000597;transcript_name=HG00140_ch_T0001665;gene_name=ENSG00000299288;ID=HG00140_ch_T0001665;Name=ENSG00000299288
HG00140_chrY_random0000005	CAT	exon	620380	620615	.	+	.	source_transcript=ENST00000762332.1;source_transcript_name=ENST00000762332;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001665;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001665;transcript_name=HG00140_ch_T0001665;gene_name=ENSG00000299288;ID=exon:HG00140_ch_T0001665:0;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	620616	624571	.	+	.	source_transcript=ENST00000762332.1;source_transcript_name=ENST00000762332;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001665;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001665;transcript_name=HG00140_ch_T0001665;gene_name=ENSG00000299288;ID=intron:HG00140_ch_T0001665:0;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	624572	624709	.	+	.	source_transcript=ENST00000762332.1;source_transcript_name=ENST00000762332;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001665;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001665;transcript_name=HG00140_ch_T0001665;gene_name=ENSG00000299288;ID=exon:HG00140_ch_T0001665:1;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	624710	628247	.	+	.	source_transcript=ENST00000762332.1;source_transcript_name=ENST00000762332;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001665;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001665;transcript_name=HG00140_ch_T0001665;gene_name=ENSG00000299288;ID=intron:HG00140_ch_T0001665:1;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	628248	628332	.	+	.	source_transcript=ENST00000762332.1;source_transcript_name=ENST00000762332;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001665;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001665;transcript_name=HG00140_ch_T0001665;gene_name=ENSG00000299288;ID=exon:HG00140_ch_T0001665:2;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	628333	634561	.	+	.	source_transcript=ENST00000762332.1;source_transcript_name=ENST00000762332;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001665;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001665;transcript_name=HG00140_ch_T0001665;gene_name=ENSG00000299288;ID=intron:HG00140_ch_T0001665:2;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	634562	635580	.	+	.	source_transcript=ENST00000762332.1;source_transcript_name=ENST00000762332;source_gene=ENSG00000299288.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299288.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000762332.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000762332.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299288;transcript_id=HG00140_ch_T0001665;gene_id=HG00140_ch_G0000597;Parent=HG00140_ch_T0001665;transcript_name=HG00140_ch_T0001665;gene_name=ENSG00000299288;ID=exon:HG00140_ch_T0001665:3;Name=ENSG00000299288;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	624572	640059	.	+	.	source_gene_common_name=ENSG00000235981;source_gene=ENSG00000235981.2;gene_id=HG00140_ch_G0000598;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000235981;gene_sources=liftoff;ID=HG00140_ch_G0000598;Name=ENSG00000235981
HG00140_chrY_random0000005	CAT	transcript	624572	640059	1000	+	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=HG00140_ch_T0001666;gene_id=HG00140_ch_G0000598;Parent=HG00140_ch_G0000598;transcript_name=HG00140_ch_T0001666;gene_name=ENSG00000235981;ID=HG00140_ch_T0001666;Name=ENSG00000235981
HG00140_chrY_random0000005	CAT	exon	624572	624709	.	+	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=HG00140_ch_T0001666;gene_id=HG00140_ch_G0000598;Parent=HG00140_ch_T0001666;transcript_name=HG00140_ch_T0001666;gene_name=ENSG00000235981;ID=exon:HG00140_ch_T0001666:0;Name=ENSG00000235981;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	624710	627069	.	+	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=HG00140_ch_T0001666;gene_id=HG00140_ch_G0000598;Parent=HG00140_ch_T0001666;transcript_name=HG00140_ch_T0001666;gene_name=ENSG00000235981;ID=intron:HG00140_ch_T0001666:0;Name=ENSG00000235981;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	627070	627154	.	+	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=HG00140_ch_T0001666;gene_id=HG00140_ch_G0000598;Parent=HG00140_ch_T0001666;transcript_name=HG00140_ch_T0001666;gene_name=ENSG00000235981;ID=exon:HG00140_ch_T0001666:1;Name=ENSG00000235981;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	627155	628247	.	+	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=HG00140_ch_T0001666;gene_id=HG00140_ch_G0000598;Parent=HG00140_ch_T0001666;transcript_name=HG00140_ch_T0001666;gene_name=ENSG00000235981;ID=intron:HG00140_ch_T0001666:1;Name=ENSG00000235981;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	628248	628332	.	+	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=HG00140_ch_T0001666;gene_id=HG00140_ch_G0000598;Parent=HG00140_ch_T0001666;transcript_name=HG00140_ch_T0001666;gene_name=ENSG00000235981;ID=exon:HG00140_ch_T0001666:2;Name=ENSG00000235981;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	628333	632620	.	+	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=HG00140_ch_T0001666;gene_id=HG00140_ch_G0000598;Parent=HG00140_ch_T0001666;transcript_name=HG00140_ch_T0001666;gene_name=ENSG00000235981;ID=intron:HG00140_ch_T0001666:2;Name=ENSG00000235981;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	632621	632679	.	+	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=HG00140_ch_T0001666;gene_id=HG00140_ch_G0000598;Parent=HG00140_ch_T0001666;transcript_name=HG00140_ch_T0001666;gene_name=ENSG00000235981;ID=exon:HG00140_ch_T0001666:3;Name=ENSG00000235981;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	632680	639186	.	+	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=HG00140_ch_T0001666;gene_id=HG00140_ch_G0000598;Parent=HG00140_ch_T0001666;transcript_name=HG00140_ch_T0001666;gene_name=ENSG00000235981;ID=intron:HG00140_ch_T0001666:3;Name=ENSG00000235981;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	639187	639235	.	+	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=HG00140_ch_T0001666;gene_id=HG00140_ch_G0000598;Parent=HG00140_ch_T0001666;transcript_name=HG00140_ch_T0001666;gene_name=ENSG00000235981;ID=exon:HG00140_ch_T0001666:4;Name=ENSG00000235981;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	639236	639963	.	+	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=HG00140_ch_T0001666;gene_id=HG00140_ch_G0000598;Parent=HG00140_ch_T0001666;transcript_name=HG00140_ch_T0001666;gene_name=ENSG00000235981;ID=intron:HG00140_ch_T0001666:4;Name=ENSG00000235981;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	639964	640059	.	+	.	source_transcript=ENST00000445264.2;source_transcript_name=ENST00000445264;source_gene=ENSG00000235981.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235981.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000445264.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000445264.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235981;transcript_id=HG00140_ch_T0001666;gene_id=HG00140_ch_G0000598;Parent=HG00140_ch_T0001666;transcript_name=HG00140_ch_T0001666;gene_name=ENSG00000235981;ID=exon:HG00140_ch_T0001666:5;Name=ENSG00000235981;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	650402	656709	.	+	.	source_gene_common_name=GOLGA6L16P;source_gene=ENSG00000197092.5;gene_id=HG00140_ch_G0000599;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=GOLGA6L16P;gene_sources=liftoff;ID=HG00140_ch_G0000599;Name=GOLGA6L16P
HG00140_chrY_random0000005	CAT	transcript	650402	656709	1000	+	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG00140_ch_T0001667;gene_id=HG00140_ch_G0000599;Parent=HG00140_ch_G0000599;transcript_name=HG00140_ch_T0001667;gene_name=GOLGA6L16P;ID=HG00140_ch_T0001667;Name=GOLGA6L16P
HG00140_chrY_random0000005	CAT	exon	650402	650485	.	+	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG00140_ch_T0001667;gene_id=HG00140_ch_G0000599;Parent=HG00140_ch_T0001667;transcript_name=HG00140_ch_T0001667;gene_name=GOLGA6L16P;ID=exon:HG00140_ch_T0001667:0;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	650486	652128	.	+	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG00140_ch_T0001667;gene_id=HG00140_ch_G0000599;Parent=HG00140_ch_T0001667;transcript_name=HG00140_ch_T0001667;gene_name=GOLGA6L16P;ID=intron:HG00140_ch_T0001667:0;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	652129	652248	.	+	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG00140_ch_T0001667;gene_id=HG00140_ch_G0000599;Parent=HG00140_ch_T0001667;transcript_name=HG00140_ch_T0001667;gene_name=GOLGA6L16P;ID=exon:HG00140_ch_T0001667:1;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	652249	652870	.	+	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG00140_ch_T0001667;gene_id=HG00140_ch_G0000599;Parent=HG00140_ch_T0001667;transcript_name=HG00140_ch_T0001667;gene_name=GOLGA6L16P;ID=intron:HG00140_ch_T0001667:1;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	652871	652930	.	+	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG00140_ch_T0001667;gene_id=HG00140_ch_G0000599;Parent=HG00140_ch_T0001667;transcript_name=HG00140_ch_T0001667;gene_name=GOLGA6L16P;ID=exon:HG00140_ch_T0001667:2;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	652931	653115	.	+	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG00140_ch_T0001667;gene_id=HG00140_ch_G0000599;Parent=HG00140_ch_T0001667;transcript_name=HG00140_ch_T0001667;gene_name=GOLGA6L16P;ID=intron:HG00140_ch_T0001667:2;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	653116	653196	.	+	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG00140_ch_T0001667;gene_id=HG00140_ch_G0000599;Parent=HG00140_ch_T0001667;transcript_name=HG00140_ch_T0001667;gene_name=GOLGA6L16P;ID=exon:HG00140_ch_T0001667:3;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	653197	653852	.	+	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG00140_ch_T0001667;gene_id=HG00140_ch_G0000599;Parent=HG00140_ch_T0001667;transcript_name=HG00140_ch_T0001667;gene_name=GOLGA6L16P;ID=intron:HG00140_ch_T0001667:3;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	653853	653909	.	+	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG00140_ch_T0001667;gene_id=HG00140_ch_G0000599;Parent=HG00140_ch_T0001667;transcript_name=HG00140_ch_T0001667;gene_name=GOLGA6L16P;ID=exon:HG00140_ch_T0001667:4;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	653910	654314	.	+	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG00140_ch_T0001667;gene_id=HG00140_ch_G0000599;Parent=HG00140_ch_T0001667;transcript_name=HG00140_ch_T0001667;gene_name=GOLGA6L16P;ID=intron:HG00140_ch_T0001667:4;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	654315	654884	.	+	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG00140_ch_T0001667;gene_id=HG00140_ch_G0000599;Parent=HG00140_ch_T0001667;transcript_name=HG00140_ch_T0001667;gene_name=GOLGA6L16P;ID=exon:HG00140_ch_T0001667:5;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	654885	655151	.	+	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG00140_ch_T0001667;gene_id=HG00140_ch_G0000599;Parent=HG00140_ch_T0001667;transcript_name=HG00140_ch_T0001667;gene_name=GOLGA6L16P;ID=intron:HG00140_ch_T0001667:5;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	655152	655222	.	+	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG00140_ch_T0001667;gene_id=HG00140_ch_G0000599;Parent=HG00140_ch_T0001667;transcript_name=HG00140_ch_T0001667;gene_name=GOLGA6L16P;ID=exon:HG00140_ch_T0001667:6;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	655223	656244	.	+	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG00140_ch_T0001667;gene_id=HG00140_ch_G0000599;Parent=HG00140_ch_T0001667;transcript_name=HG00140_ch_T0001667;gene_name=GOLGA6L16P;ID=intron:HG00140_ch_T0001667:6;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	656245	656368	.	+	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG00140_ch_T0001667;gene_id=HG00140_ch_G0000599;Parent=HG00140_ch_T0001667;transcript_name=HG00140_ch_T0001667;gene_name=GOLGA6L16P;ID=exon:HG00140_ch_T0001667:7;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	656369	656577	.	+	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG00140_ch_T0001667;gene_id=HG00140_ch_G0000599;Parent=HG00140_ch_T0001667;transcript_name=HG00140_ch_T0001667;gene_name=GOLGA6L16P;ID=intron:HG00140_ch_T0001667:7;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	656578	656709	.	+	.	source_transcript=ENST00000441780.1;source_transcript_name=GOLGA6L16P-201;source_gene=ENSG00000197092.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000197092.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441780.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441780.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L16P;transcript_id=HG00140_ch_T0001667;gene_id=HG00140_ch_G0000599;Parent=HG00140_ch_T0001667;transcript_name=HG00140_ch_T0001667;gene_name=GOLGA6L16P;ID=exon:HG00140_ch_T0001667:8;Name=GOLGA6L16P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	653847	659430	.	+	.	source_gene_common_name=ENSG00000307363;source_gene=ENSG00000307363.1;gene_id=HG00140_ch_G0000600;gene_biotype=lncRNA;gene_name=ENSG00000307363;gene_sources=liftoff;ID=HG00140_ch_G0000600;Name=ENSG00000307363
HG00140_chrY_random0000005	CAT	transcript	653847	656741	1000	+	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001668;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_G0000600;transcript_name=HG00140_ch_T0001668;gene_name=ENSG00000307363;ID=HG00140_ch_T0001668;Name=ENSG00000307363
HG00140_chrY_random0000005	CAT	exon	653847	653927	.	+	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001668;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001668;transcript_name=HG00140_ch_T0001668;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001668:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	653928	655151	.	+	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001668;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001668;transcript_name=HG00140_ch_T0001668;gene_name=ENSG00000307363;ID=intron:HG00140_ch_T0001668:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	655152	655390	.	+	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001668;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001668;transcript_name=HG00140_ch_T0001668;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001668:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	655391	656252	.	+	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001668;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001668;transcript_name=HG00140_ch_T0001668;gene_name=ENSG00000307363;ID=intron:HG00140_ch_T0001668:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	656253	656367	.	+	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001668;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001668;transcript_name=HG00140_ch_T0001668;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001668:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	656368	656576	.	+	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001668;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001668;transcript_name=HG00140_ch_T0001668;gene_name=ENSG00000307363;ID=intron:HG00140_ch_T0001668:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	656577	656741	.	+	.	source_transcript=ENST00000825427.1;source_transcript_name=ENST00000825427;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825427.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825427.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001668;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001668;transcript_name=HG00140_ch_T0001668;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001668:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	653861	656741	1000	+	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001669;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_G0000600;transcript_name=HG00140_ch_T0001669;gene_name=ENSG00000307363;ID=HG00140_ch_T0001669;Name=ENSG00000307363
HG00140_chrY_random0000005	CAT	exon	653861	653927	.	+	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001669;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001669;transcript_name=HG00140_ch_T0001669;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001669:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	653928	655151	.	+	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001669;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001669;transcript_name=HG00140_ch_T0001669;gene_name=ENSG00000307363;ID=intron:HG00140_ch_T0001669:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	655152	655212	.	+	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001669;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001669;transcript_name=HG00140_ch_T0001669;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001669:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	655213	656252	.	+	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001669;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001669;transcript_name=HG00140_ch_T0001669;gene_name=ENSG00000307363;ID=intron:HG00140_ch_T0001669:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	656253	656367	.	+	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001669;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001669;transcript_name=HG00140_ch_T0001669;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001669:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	656368	656576	.	+	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001669;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001669;transcript_name=HG00140_ch_T0001669;gene_name=ENSG00000307363;ID=intron:HG00140_ch_T0001669:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	656577	656741	.	+	.	source_transcript=ENST00000825428.1;source_transcript_name=ENST00000825428;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825428.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825428.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001669;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001669;transcript_name=HG00140_ch_T0001669;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001669:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	654020	659430	1000	+	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001670;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_G0000600;transcript_name=HG00140_ch_T0001670;gene_name=ENSG00000307363;ID=HG00140_ch_T0001670;Name=ENSG00000307363
HG00140_chrY_random0000005	CAT	exon	654020	654884	.	+	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001670;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001670;transcript_name=HG00140_ch_T0001670;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001670:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	654885	655151	.	+	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001670;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001670;transcript_name=HG00140_ch_T0001670;gene_name=ENSG00000307363;ID=intron:HG00140_ch_T0001670:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	655152	655212	.	+	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001670;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001670;transcript_name=HG00140_ch_T0001670;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001670:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	655213	656252	.	+	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001670;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001670;transcript_name=HG00140_ch_T0001670;gene_name=ENSG00000307363;ID=intron:HG00140_ch_T0001670:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	656253	656367	.	+	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001670;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001670;transcript_name=HG00140_ch_T0001670;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001670:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	656368	656576	.	+	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001670;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001670;transcript_name=HG00140_ch_T0001670;gene_name=ENSG00000307363;ID=intron:HG00140_ch_T0001670:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	656577	659430	.	+	.	source_transcript=ENST00000825426.1;source_transcript_name=ENST00000825426;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825426.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825426.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001670;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001670;transcript_name=HG00140_ch_T0001670;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001670:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	654277	657143	1000	+	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001671;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_G0000600;transcript_name=HG00140_ch_T0001671;gene_name=ENSG00000307363;ID=HG00140_ch_T0001671;Name=ENSG00000307363
HG00140_chrY_random0000005	CAT	exon	654277	654884	.	+	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001671;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001671;transcript_name=HG00140_ch_T0001671;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001671:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	654885	655151	.	+	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001671;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001671;transcript_name=HG00140_ch_T0001671;gene_name=ENSG00000307363;ID=intron:HG00140_ch_T0001671:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	655152	655229	.	+	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001671;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001671;transcript_name=HG00140_ch_T0001671;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001671:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	655230	656252	.	+	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001671;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001671;transcript_name=HG00140_ch_T0001671;gene_name=ENSG00000307363;ID=intron:HG00140_ch_T0001671:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	656253	656367	.	+	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001671;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001671;transcript_name=HG00140_ch_T0001671;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001671:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	656368	656576	.	+	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001671;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001671;transcript_name=HG00140_ch_T0001671;gene_name=ENSG00000307363;ID=intron:HG00140_ch_T0001671:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	656577	657143	.	+	.	source_transcript=ENST00000825429.1;source_transcript_name=ENST00000825429;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825429.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001671;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001671;transcript_name=HG00140_ch_T0001671;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001671:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	654441	656741	1000	+	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001672;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_G0000600;transcript_name=HG00140_ch_T0001672;gene_name=ENSG00000307363;ID=HG00140_ch_T0001672;Name=ENSG00000307363
HG00140_chrY_random0000005	CAT	exon	654441	654613	.	+	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001672;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001672;transcript_name=HG00140_ch_T0001672;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001672:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	654614	655151	.	+	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001672;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001672;transcript_name=HG00140_ch_T0001672;gene_name=ENSG00000307363;ID=intron:HG00140_ch_T0001672:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	655152	655212	.	+	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001672;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001672;transcript_name=HG00140_ch_T0001672;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001672:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	655213	656252	.	+	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001672;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001672;transcript_name=HG00140_ch_T0001672;gene_name=ENSG00000307363;ID=intron:HG00140_ch_T0001672:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	656253	656367	.	+	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001672;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001672;transcript_name=HG00140_ch_T0001672;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001672:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	656368	656576	.	+	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001672;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001672;transcript_name=HG00140_ch_T0001672;gene_name=ENSG00000307363;ID=intron:HG00140_ch_T0001672:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	656577	656741	.	+	.	source_transcript=ENST00000825430.1;source_transcript_name=ENST00000825430;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825430.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825430.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001672;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001672;transcript_name=HG00140_ch_T0001672;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001672:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	654449	656741	1000	+	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001673;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_G0000600;transcript_name=HG00140_ch_T0001673;gene_name=ENSG00000307363;ID=HG00140_ch_T0001673;Name=ENSG00000307363
HG00140_chrY_random0000005	CAT	exon	654449	654613	.	+	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001673;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001673;transcript_name=HG00140_ch_T0001673;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001673:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	654614	655151	.	+	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001673;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001673;transcript_name=HG00140_ch_T0001673;gene_name=ENSG00000307363;ID=intron:HG00140_ch_T0001673:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	655152	655390	.	+	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001673;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001673;transcript_name=HG00140_ch_T0001673;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001673:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	655391	656252	.	+	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001673;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001673;transcript_name=HG00140_ch_T0001673;gene_name=ENSG00000307363;ID=intron:HG00140_ch_T0001673:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	656253	656367	.	+	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001673;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001673;transcript_name=HG00140_ch_T0001673;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001673:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	656368	656576	.	+	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001673;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001673;transcript_name=HG00140_ch_T0001673;gene_name=ENSG00000307363;ID=intron:HG00140_ch_T0001673:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	656577	656741	.	+	.	source_transcript=ENST00000825431.1;source_transcript_name=ENST00000825431;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825431.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001673;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001673;transcript_name=HG00140_ch_T0001673;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001673:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	654497	656741	1000	+	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001674;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_G0000600;transcript_name=HG00140_ch_T0001674;gene_name=ENSG00000307363;ID=HG00140_ch_T0001674;Name=ENSG00000307363
HG00140_chrY_random0000005	CAT	exon	654497	654613	.	+	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001674;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001674;transcript_name=HG00140_ch_T0001674;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001674:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	654614	655151	.	+	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001674;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001674;transcript_name=HG00140_ch_T0001674;gene_name=ENSG00000307363;ID=intron:HG00140_ch_T0001674:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	655152	655229	.	+	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001674;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001674;transcript_name=HG00140_ch_T0001674;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001674:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	655230	656252	.	+	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001674;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001674;transcript_name=HG00140_ch_T0001674;gene_name=ENSG00000307363;ID=intron:HG00140_ch_T0001674:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	656253	656367	.	+	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001674;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001674;transcript_name=HG00140_ch_T0001674;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001674:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	656368	656576	.	+	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001674;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001674;transcript_name=HG00140_ch_T0001674;gene_name=ENSG00000307363;ID=intron:HG00140_ch_T0001674:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	656577	656741	.	+	.	source_transcript=ENST00000825432.1;source_transcript_name=ENST00000825432;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001674;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001674;transcript_name=HG00140_ch_T0001674;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001674:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	654531	656741	1000	+	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001675;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_G0000600;transcript_name=HG00140_ch_T0001675;gene_name=ENSG00000307363;ID=HG00140_ch_T0001675;Name=ENSG00000307363
HG00140_chrY_random0000005	CAT	exon	654531	654713	.	+	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001675;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001675;transcript_name=HG00140_ch_T0001675;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001675:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	654714	655151	.	+	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001675;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001675;transcript_name=HG00140_ch_T0001675;gene_name=ENSG00000307363;ID=intron:HG00140_ch_T0001675:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	655152	655229	.	+	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001675;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001675;transcript_name=HG00140_ch_T0001675;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001675:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	655230	656252	.	+	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001675;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001675;transcript_name=HG00140_ch_T0001675;gene_name=ENSG00000307363;ID=intron:HG00140_ch_T0001675:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	656253	656367	.	+	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001675;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001675;transcript_name=HG00140_ch_T0001675;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001675:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	656368	656576	.	+	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001675;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001675;transcript_name=HG00140_ch_T0001675;gene_name=ENSG00000307363;ID=intron:HG00140_ch_T0001675:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	656577	656741	.	+	.	source_transcript=ENST00000825434.1;source_transcript_name=ENST00000825434;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001675;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001675;transcript_name=HG00140_ch_T0001675;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001675:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	654531	656741	1000	+	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001676;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_G0000600;transcript_name=HG00140_ch_T0001676;gene_name=ENSG00000307363;ID=HG00140_ch_T0001676;Name=ENSG00000307363
HG00140_chrY_random0000005	CAT	exon	654531	654713	.	+	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001676;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001676;transcript_name=HG00140_ch_T0001676;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001676:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	654714	655151	.	+	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001676;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001676;transcript_name=HG00140_ch_T0001676;gene_name=ENSG00000307363;ID=intron:HG00140_ch_T0001676:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	655152	655212	.	+	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001676;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001676;transcript_name=HG00140_ch_T0001676;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001676:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	655213	656252	.	+	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001676;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001676;transcript_name=HG00140_ch_T0001676;gene_name=ENSG00000307363;ID=intron:HG00140_ch_T0001676:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	656253	656367	.	+	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001676;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001676;transcript_name=HG00140_ch_T0001676;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001676:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	656368	656576	.	+	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001676;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001676;transcript_name=HG00140_ch_T0001676;gene_name=ENSG00000307363;ID=intron:HG00140_ch_T0001676:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	656577	656741	.	+	.	source_transcript=ENST00000825433.1;source_transcript_name=ENST00000825433;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001676;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001676;transcript_name=HG00140_ch_T0001676;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001676:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	654552	656741	1000	+	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001677;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_G0000600;transcript_name=HG00140_ch_T0001677;gene_name=ENSG00000307363;ID=HG00140_ch_T0001677;Name=ENSG00000307363
HG00140_chrY_random0000005	CAT	exon	654552	654713	.	+	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001677;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001677;transcript_name=HG00140_ch_T0001677;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001677:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	654714	655151	.	+	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001677;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001677;transcript_name=HG00140_ch_T0001677;gene_name=ENSG00000307363;ID=intron:HG00140_ch_T0001677:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	655152	655390	.	+	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001677;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001677;transcript_name=HG00140_ch_T0001677;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001677:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	655391	656252	.	+	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001677;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001677;transcript_name=HG00140_ch_T0001677;gene_name=ENSG00000307363;ID=intron:HG00140_ch_T0001677:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	656253	656367	.	+	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001677;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001677;transcript_name=HG00140_ch_T0001677;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001677:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	656368	656576	.	+	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001677;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001677;transcript_name=HG00140_ch_T0001677;gene_name=ENSG00000307363;ID=intron:HG00140_ch_T0001677:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	656577	656741	.	+	.	source_transcript=ENST00000825435.1;source_transcript_name=ENST00000825435;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825435.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001677;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001677;transcript_name=HG00140_ch_T0001677;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001677:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	654611	656740	1000	+	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001678;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_G0000600;transcript_name=HG00140_ch_T0001678;gene_name=ENSG00000307363;ID=HG00140_ch_T0001678;Name=ENSG00000307363
HG00140_chrY_random0000005	CAT	exon	654611	654799	.	+	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001678;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001678;transcript_name=HG00140_ch_T0001678;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001678:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	654800	655151	.	+	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001678;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001678;transcript_name=HG00140_ch_T0001678;gene_name=ENSG00000307363;ID=intron:HG00140_ch_T0001678:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	655152	655390	.	+	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001678;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001678;transcript_name=HG00140_ch_T0001678;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001678:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	655391	656252	.	+	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001678;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001678;transcript_name=HG00140_ch_T0001678;gene_name=ENSG00000307363;ID=intron:HG00140_ch_T0001678:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	656253	656367	.	+	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001678;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001678;transcript_name=HG00140_ch_T0001678;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001678:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	656368	656576	.	+	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001678;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001678;transcript_name=HG00140_ch_T0001678;gene_name=ENSG00000307363;ID=intron:HG00140_ch_T0001678:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	656577	656740	.	+	.	source_transcript=ENST00000825436.1;source_transcript_name=ENST00000825436;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001678;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001678;transcript_name=HG00140_ch_T0001678;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001678:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	654650	656741	1000	+	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001679;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_G0000600;transcript_name=HG00140_ch_T0001679;gene_name=ENSG00000307363;ID=HG00140_ch_T0001679;Name=ENSG00000307363
HG00140_chrY_random0000005	CAT	exon	654650	654884	.	+	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001679;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001679;transcript_name=HG00140_ch_T0001679;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001679:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	654885	655151	.	+	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001679;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001679;transcript_name=HG00140_ch_T0001679;gene_name=ENSG00000307363;ID=intron:HG00140_ch_T0001679:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	655152	655390	.	+	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001679;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001679;transcript_name=HG00140_ch_T0001679;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001679:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	655391	656252	.	+	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001679;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001679;transcript_name=HG00140_ch_T0001679;gene_name=ENSG00000307363;ID=intron:HG00140_ch_T0001679:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	656253	656367	.	+	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001679;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001679;transcript_name=HG00140_ch_T0001679;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001679:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	656368	656576	.	+	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001679;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001679;transcript_name=HG00140_ch_T0001679;gene_name=ENSG00000307363;ID=intron:HG00140_ch_T0001679:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	656577	656741	.	+	.	source_transcript=ENST00000825437.1;source_transcript_name=ENST00000825437;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001679;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001679;transcript_name=HG00140_ch_T0001679;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001679:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	654773	656741	1000	+	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001680;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_G0000600;transcript_name=HG00140_ch_T0001680;gene_name=ENSG00000307363;ID=HG00140_ch_T0001680;Name=ENSG00000307363
HG00140_chrY_random0000005	CAT	exon	654773	655040	.	+	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001680;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001680;transcript_name=HG00140_ch_T0001680;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001680:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	655041	655151	.	+	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001680;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001680;transcript_name=HG00140_ch_T0001680;gene_name=ENSG00000307363;ID=intron:HG00140_ch_T0001680:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	655152	655212	.	+	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001680;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001680;transcript_name=HG00140_ch_T0001680;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001680:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	655213	656252	.	+	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001680;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001680;transcript_name=HG00140_ch_T0001680;gene_name=ENSG00000307363;ID=intron:HG00140_ch_T0001680:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	656253	656367	.	+	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001680;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001680;transcript_name=HG00140_ch_T0001680;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001680:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	656368	656576	.	+	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001680;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001680;transcript_name=HG00140_ch_T0001680;gene_name=ENSG00000307363;ID=intron:HG00140_ch_T0001680:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	656577	656741	.	+	.	source_transcript=ENST00000825438.1;source_transcript_name=ENST00000825438;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825438.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001680;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001680;transcript_name=HG00140_ch_T0001680;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001680:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	654867	656741	1000	+	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001681;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_G0000600;transcript_name=HG00140_ch_T0001681;gene_name=ENSG00000307363;ID=HG00140_ch_T0001681;Name=ENSG00000307363
HG00140_chrY_random0000005	CAT	exon	654867	655040	.	+	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001681;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001681;transcript_name=HG00140_ch_T0001681;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001681:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	655041	655151	.	+	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001681;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001681;transcript_name=HG00140_ch_T0001681;gene_name=ENSG00000307363;ID=intron:HG00140_ch_T0001681:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	655152	655229	.	+	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001681;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001681;transcript_name=HG00140_ch_T0001681;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001681:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	655230	656252	.	+	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001681;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001681;transcript_name=HG00140_ch_T0001681;gene_name=ENSG00000307363;ID=intron:HG00140_ch_T0001681:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	656253	656367	.	+	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001681;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001681;transcript_name=HG00140_ch_T0001681;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001681:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	656368	656576	.	+	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001681;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001681;transcript_name=HG00140_ch_T0001681;gene_name=ENSG00000307363;ID=intron:HG00140_ch_T0001681:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	656577	656741	.	+	.	source_transcript=ENST00000825440.1;source_transcript_name=ENST00000825440;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001681;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001681;transcript_name=HG00140_ch_T0001681;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001681:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	654867	656741	1000	+	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001682;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_G0000600;transcript_name=HG00140_ch_T0001682;gene_name=ENSG00000307363;ID=HG00140_ch_T0001682;Name=ENSG00000307363
HG00140_chrY_random0000005	CAT	exon	654867	655040	.	+	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001682;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001682;transcript_name=HG00140_ch_T0001682;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001682:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	655041	655151	.	+	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001682;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001682;transcript_name=HG00140_ch_T0001682;gene_name=ENSG00000307363;ID=intron:HG00140_ch_T0001682:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	655152	655390	.	+	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001682;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001682;transcript_name=HG00140_ch_T0001682;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001682:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	655391	656252	.	+	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001682;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001682;transcript_name=HG00140_ch_T0001682;gene_name=ENSG00000307363;ID=intron:HG00140_ch_T0001682:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	656253	656367	.	+	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001682;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001682;transcript_name=HG00140_ch_T0001682;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001682:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	656368	656576	.	+	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001682;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001682;transcript_name=HG00140_ch_T0001682;gene_name=ENSG00000307363;ID=intron:HG00140_ch_T0001682:2;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	656577	656741	.	+	.	source_transcript=ENST00000825439.1;source_transcript_name=ENST00000825439;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001682;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001682;transcript_name=HG00140_ch_T0001682;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001682:3;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	656018	656742	1000	+	.	source_transcript=ENST00000825441.1;source_transcript_name=ENST00000825441;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825441.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825441.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001683;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_G0000600;transcript_name=HG00140_ch_T0001683;gene_name=ENSG00000307363;ID=HG00140_ch_T0001683;Name=ENSG00000307363
HG00140_chrY_random0000005	CAT	exon	656018	656367	.	+	.	source_transcript=ENST00000825441.1;source_transcript_name=ENST00000825441;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825441.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001683;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001683;transcript_name=HG00140_ch_T0001683;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001683:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	656368	656576	.	+	.	source_transcript=ENST00000825441.1;source_transcript_name=ENST00000825441;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825441.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001683;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001683;transcript_name=HG00140_ch_T0001683;gene_name=ENSG00000307363;ID=intron:HG00140_ch_T0001683:0;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	656577	656742	.	+	.	source_transcript=ENST00000825441.1;source_transcript_name=ENST00000825441;source_gene=ENSG00000307363.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307363.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000825441.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000825441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307363;transcript_id=HG00140_ch_T0001683;gene_id=HG00140_ch_G0000600;Parent=HG00140_ch_T0001683;transcript_name=HG00140_ch_T0001683;gene_name=ENSG00000307363;ID=exon:HG00140_ch_T0001683:1;Name=ENSG00000307363;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	664698	665076	.	+	.	source_gene_common_name=ENSG00000233619;source_gene=ENSG00000233619.1;gene_id=HG00140_ch_G0000601;gene_biotype=processed_pseudogene;gene_name=ENSG00000233619;gene_sources=liftoff;ID=HG00140_ch_G0000601;Name=ENSG00000233619
HG00140_chrY_random0000005	CAT	transcript	664698	665076	1000	+	.	source_transcript=ENST00000437571.1;source_transcript_name=ENST00000437571;source_gene=ENSG00000233619.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233619.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000437571.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437571.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000233619;transcript_id=HG00140_ch_T0001684;gene_id=HG00140_ch_G0000601;Parent=HG00140_ch_G0000601;transcript_name=HG00140_ch_T0001684;gene_name=ENSG00000233619;ID=HG00140_ch_T0001684;Name=ENSG00000233619
HG00140_chrY_random0000005	CAT	exon	664698	665076	.	+	.	source_transcript=ENST00000437571.1;source_transcript_name=ENST00000437571;source_gene=ENSG00000233619.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233619.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000437571.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437571.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000233619;transcript_id=HG00140_ch_T0001684;gene_id=HG00140_ch_G0000601;Parent=HG00140_ch_T0001684;transcript_name=HG00140_ch_T0001684;gene_name=ENSG00000233619;ID=exon:HG00140_ch_T0001684:0;Name=ENSG00000233619;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	665038	665720	.	-	.	source_gene_common_name=DNM1P48;source_gene=ENSG00000239304.1;gene_id=HG00140_ch_G0000602;gene_biotype=transcribed_processed_pseudogene;gene_name=DNM1P48;gene_sources=liftoff;ID=HG00140_ch_G0000602;Name=DNM1P48
HG00140_chrY_random0000005	CAT	transcript	665038	665720	1000	-	.	source_transcript=ENST00000419538.1;source_transcript_name=DNM1P48-201;source_gene=ENSG00000239304.1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000239304.1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000419538.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419538.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DNM1P48;transcript_id=HG00140_ch_T0001685;gene_id=HG00140_ch_G0000602;Parent=HG00140_ch_G0000602;transcript_name=HG00140_ch_T0001685;gene_name=DNM1P48;ID=HG00140_ch_T0001685;Name=DNM1P48
HG00140_chrY_random0000005	CAT	exon	665038	665250	.	-	.	source_transcript=ENST00000419538.1;source_transcript_name=DNM1P48-201;source_gene=ENSG00000239304.1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000239304.1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000419538.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DNM1P48;transcript_id=HG00140_ch_T0001685;gene_id=HG00140_ch_G0000602;Parent=HG00140_ch_T0001685;transcript_name=HG00140_ch_T0001685;gene_name=DNM1P48;ID=exon:HG00140_ch_T0001685:0;Name=DNM1P48;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	665251	665494	.	-	.	source_transcript=ENST00000419538.1;source_transcript_name=DNM1P48-201;source_gene=ENSG00000239304.1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000239304.1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000419538.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DNM1P48;transcript_id=HG00140_ch_T0001685;gene_id=HG00140_ch_G0000602;Parent=HG00140_ch_T0001685;transcript_name=HG00140_ch_T0001685;gene_name=DNM1P48;ID=intron:HG00140_ch_T0001685:0;Name=DNM1P48;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	665495	665720	.	-	.	source_transcript=ENST00000419538.1;source_transcript_name=DNM1P48-201;source_gene=ENSG00000239304.1;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000239304.1;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000419538.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DNM1P48;transcript_id=HG00140_ch_T0001685;gene_id=HG00140_ch_G0000602;Parent=HG00140_ch_T0001685;transcript_name=HG00140_ch_T0001685;gene_name=DNM1P48;ID=exon:HG00140_ch_T0001685:1;Name=DNM1P48;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	665655	669452	.	-	.	source_gene_common_name=CSPG4P1Y;source_gene=ENSG00000240450.1;gene_id=HG00140_ch_G0000603;gene_biotype=lncRNA;gene_name=CSPG4P1Y;gene_sources=liftoff;ID=HG00140_ch_G0000603;Name=CSPG4P1Y
HG00140_chrY_random0000005	CAT	transcript	665655	669452	1000	-	.	source_transcript=ENST00000306641.1;source_transcript_name=CSPG4P1Y-201;source_gene=ENSG00000240450.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000240450.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000306641.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000306641.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=HG00140_ch_T0001686;gene_id=HG00140_ch_G0000603;Parent=HG00140_ch_G0000603;transcript_name=HG00140_ch_T0001686;gene_name=CSPG4P1Y;ID=HG00140_ch_T0001686;Name=CSPG4P1Y
HG00140_chrY_random0000005	CAT	exon	665655	665726	.	-	.	source_transcript=ENST00000306641.1;source_transcript_name=CSPG4P1Y-201;source_gene=ENSG00000240450.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000240450.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000306641.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000306641.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=HG00140_ch_T0001686;gene_id=HG00140_ch_G0000603;Parent=HG00140_ch_T0001686;transcript_name=HG00140_ch_T0001686;gene_name=CSPG4P1Y;ID=exon:HG00140_ch_T0001686:0;Name=CSPG4P1Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	665727	668729	.	-	.	source_transcript=ENST00000306641.1;source_transcript_name=CSPG4P1Y-201;source_gene=ENSG00000240450.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000240450.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000306641.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000306641.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=HG00140_ch_T0001686;gene_id=HG00140_ch_G0000603;Parent=HG00140_ch_T0001686;transcript_name=HG00140_ch_T0001686;gene_name=CSPG4P1Y;ID=intron:HG00140_ch_T0001686:0;Name=CSPG4P1Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	668730	669452	.	-	.	source_transcript=ENST00000306641.1;source_transcript_name=CSPG4P1Y-201;source_gene=ENSG00000240450.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000240450.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000306641.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000306641.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=HG00140_ch_T0001686;gene_id=HG00140_ch_G0000603;Parent=HG00140_ch_T0001686;transcript_name=HG00140_ch_T0001686;gene_name=CSPG4P1Y;ID=exon:HG00140_ch_T0001686:1;Name=CSPG4P1Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	668730	674091	.	-	.	source_gene_common_name=CSPG4P4Y;source_gene=ENSG00000172294.7;gene_id=HG00140_ch_G0000604;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=CSPG4P4Y;gene_sources=liftoff;ID=HG00140_ch_G0000604;Name=CSPG4P4Y
HG00140_chrY_random0000005	CAT	transcript	668730	674091	1000	-	.	source_transcript=ENST00000333235.3;source_transcript_name=CSPG4P4Y-201;source_gene=ENSG00000172294.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000172294.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000333235.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000333235.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P4Y;transcript_id=HG00140_ch_T0001687;gene_id=HG00140_ch_G0000604;Parent=HG00140_ch_G0000604;transcript_name=HG00140_ch_T0001687;gene_name=CSPG4P4Y;ID=HG00140_ch_T0001687;Name=CSPG4P4Y
HG00140_chrY_random0000005	CAT	exon	668730	672289	.	-	.	source_transcript=ENST00000333235.3;source_transcript_name=CSPG4P4Y-201;source_gene=ENSG00000172294.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000172294.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000333235.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000333235.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P4Y;transcript_id=HG00140_ch_T0001687;gene_id=HG00140_ch_G0000604;Parent=HG00140_ch_T0001687;transcript_name=HG00140_ch_T0001687;gene_name=CSPG4P4Y;ID=exon:HG00140_ch_T0001687:0;Name=CSPG4P4Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	672290	673927	.	-	.	source_transcript=ENST00000333235.3;source_transcript_name=CSPG4P4Y-201;source_gene=ENSG00000172294.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000172294.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000333235.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000333235.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P4Y;transcript_id=HG00140_ch_T0001687;gene_id=HG00140_ch_G0000604;Parent=HG00140_ch_T0001687;transcript_name=HG00140_ch_T0001687;gene_name=CSPG4P4Y;ID=intron:HG00140_ch_T0001687:0;Name=CSPG4P4Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	673928	674091	.	-	.	source_transcript=ENST00000333235.3;source_transcript_name=CSPG4P4Y-201;source_gene=ENSG00000172294.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000172294.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000333235.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000333235.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P4Y;transcript_id=HG00140_ch_T0001687;gene_id=HG00140_ch_G0000604;Parent=HG00140_ch_T0001687;transcript_name=HG00140_ch_T0001687;gene_name=CSPG4P4Y;ID=exon:HG00140_ch_T0001687:1;Name=CSPG4P4Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	678680	688264	.	-	.	source_gene_common_name=ENSG00000310249;source_gene=ENSG00000310249.1;gene_id=HG00140_ch_G0000605;gene_biotype=lncRNA;gene_name=ENSG00000310249;gene_sources=liftoff;ID=HG00140_ch_G0000605;Name=ENSG00000310249
HG00140_chrY_random0000005	CAT	transcript	678680	688264	1000	-	.	source_transcript=ENST00000848543.1;source_transcript_name=ENST00000848543;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848543.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848543.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=HG00140_ch_T0001688;gene_id=HG00140_ch_G0000605;Parent=HG00140_ch_G0000605;transcript_name=HG00140_ch_T0001688;gene_name=ENSG00000310249;ID=HG00140_ch_T0001688;Name=ENSG00000310249
HG00140_chrY_random0000005	CAT	exon	678680	678900	.	-	.	source_transcript=ENST00000848543.1;source_transcript_name=ENST00000848543;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848543.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848543.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=HG00140_ch_T0001688;gene_id=HG00140_ch_G0000605;Parent=HG00140_ch_T0001688;transcript_name=HG00140_ch_T0001688;gene_name=ENSG00000310249;ID=exon:HG00140_ch_T0001688:0;Name=ENSG00000310249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	678901	686700	.	-	.	source_transcript=ENST00000848543.1;source_transcript_name=ENST00000848543;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848543.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848543.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=HG00140_ch_T0001688;gene_id=HG00140_ch_G0000605;Parent=HG00140_ch_T0001688;transcript_name=HG00140_ch_T0001688;gene_name=ENSG00000310249;ID=intron:HG00140_ch_T0001688:0;Name=ENSG00000310249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	686701	686850	.	-	.	source_transcript=ENST00000848543.1;source_transcript_name=ENST00000848543;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848543.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848543.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=HG00140_ch_T0001688;gene_id=HG00140_ch_G0000605;Parent=HG00140_ch_T0001688;transcript_name=HG00140_ch_T0001688;gene_name=ENSG00000310249;ID=exon:HG00140_ch_T0001688:1;Name=ENSG00000310249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	686851	687896	.	-	.	source_transcript=ENST00000848543.1;source_transcript_name=ENST00000848543;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848543.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848543.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=HG00140_ch_T0001688;gene_id=HG00140_ch_G0000605;Parent=HG00140_ch_T0001688;transcript_name=HG00140_ch_T0001688;gene_name=ENSG00000310249;ID=intron:HG00140_ch_T0001688:1;Name=ENSG00000310249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	687897	688264	.	-	.	source_transcript=ENST00000848543.1;source_transcript_name=ENST00000848543;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848543.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848543.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=HG00140_ch_T0001688;gene_id=HG00140_ch_G0000605;Parent=HG00140_ch_T0001688;transcript_name=HG00140_ch_T0001688;gene_name=ENSG00000310249;ID=exon:HG00140_ch_T0001688:2;Name=ENSG00000310249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	678680	688008	1000	-	.	source_transcript=ENST00000848544.1;source_transcript_name=ENST00000848544;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848544.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=HG00140_ch_T0001689;gene_id=HG00140_ch_G0000605;Parent=HG00140_ch_G0000605;transcript_name=HG00140_ch_T0001689;gene_name=ENSG00000310249;ID=HG00140_ch_T0001689;Name=ENSG00000310249
HG00140_chrY_random0000005	CAT	exon	678680	678900	.	-	.	source_transcript=ENST00000848544.1;source_transcript_name=ENST00000848544;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=HG00140_ch_T0001689;gene_id=HG00140_ch_G0000605;Parent=HG00140_ch_T0001689;transcript_name=HG00140_ch_T0001689;gene_name=ENSG00000310249;ID=exon:HG00140_ch_T0001689:0;Name=ENSG00000310249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	678901	686700	.	-	.	source_transcript=ENST00000848544.1;source_transcript_name=ENST00000848544;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=HG00140_ch_T0001689;gene_id=HG00140_ch_G0000605;Parent=HG00140_ch_T0001689;transcript_name=HG00140_ch_T0001689;gene_name=ENSG00000310249;ID=intron:HG00140_ch_T0001689:0;Name=ENSG00000310249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	686701	686879	.	-	.	source_transcript=ENST00000848544.1;source_transcript_name=ENST00000848544;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=HG00140_ch_T0001689;gene_id=HG00140_ch_G0000605;Parent=HG00140_ch_T0001689;transcript_name=HG00140_ch_T0001689;gene_name=ENSG00000310249;ID=exon:HG00140_ch_T0001689:1;Name=ENSG00000310249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	686880	687896	.	-	.	source_transcript=ENST00000848544.1;source_transcript_name=ENST00000848544;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=HG00140_ch_T0001689;gene_id=HG00140_ch_G0000605;Parent=HG00140_ch_T0001689;transcript_name=HG00140_ch_T0001689;gene_name=ENSG00000310249;ID=intron:HG00140_ch_T0001689:1;Name=ENSG00000310249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	687897	688008	.	-	.	source_transcript=ENST00000848544.1;source_transcript_name=ENST00000848544;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848544.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848544.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=HG00140_ch_T0001689;gene_id=HG00140_ch_G0000605;Parent=HG00140_ch_T0001689;transcript_name=HG00140_ch_T0001689;gene_name=ENSG00000310249;ID=exon:HG00140_ch_T0001689:2;Name=ENSG00000310249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	678801	686880	1000	-	.	source_transcript=ENST00000848545.1;source_transcript_name=ENST00000848545;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848545.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848545.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=HG00140_ch_T0001691;gene_id=HG00140_ch_G0000605;Parent=HG00140_ch_G0000605;transcript_name=HG00140_ch_T0001691;gene_name=ENSG00000310249;ID=HG00140_ch_T0001691;Name=ENSG00000310249
HG00140_chrY_random0000005	CAT	exon	678801	678900	.	-	.	source_transcript=ENST00000848545.1;source_transcript_name=ENST00000848545;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848545.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848545.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=HG00140_ch_T0001691;gene_id=HG00140_ch_G0000605;Parent=HG00140_ch_T0001691;transcript_name=HG00140_ch_T0001691;gene_name=ENSG00000310249;ID=exon:HG00140_ch_T0001691:0;Name=ENSG00000310249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	678901	686700	.	-	.	source_transcript=ENST00000848545.1;source_transcript_name=ENST00000848545;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848545.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848545.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=HG00140_ch_T0001691;gene_id=HG00140_ch_G0000605;Parent=HG00140_ch_T0001691;transcript_name=HG00140_ch_T0001691;gene_name=ENSG00000310249;ID=intron:HG00140_ch_T0001691:0;Name=ENSG00000310249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	686701	686880	.	-	.	source_transcript=ENST00000848545.1;source_transcript_name=ENST00000848545;source_gene=ENSG00000310249.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310249.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848545.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848545.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310249;transcript_id=HG00140_ch_T0001691;gene_id=HG00140_ch_G0000605;Parent=HG00140_ch_T0001691;transcript_name=HG00140_ch_T0001691;gene_name=ENSG00000310249;ID=exon:HG00140_ch_T0001691:1;Name=ENSG00000310249;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	678739	688356	.	-	.	source_gene_common_name=ENSG00000284380;source_gene=ENSG00000284380.1;alternative_source_transcripts=ENST00000624333.2;gene_id=HG00140_ch_G0000606;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000284380;gene_sources=liftoff;ID=HG00140_ch_G0000606;Name=ENSG00000284380
HG00140_chrY_random0000005	CAT	transcript	678739	688356	1000	-	.	source_transcript=ENST00000623198.2;source_transcript_name=ENST00000623198;source_gene=ENSG00000284380.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284380.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000623198.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000623198.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284380;alternative_source_transcripts=ENST00000624333.2;transcript_id=HG00140_ch_T0001690;gene_id=HG00140_ch_G0000606;Parent=HG00140_ch_G0000606;transcript_name=HG00140_ch_T0001690;gene_name=ENSG00000284380;ID=HG00140_ch_T0001690;Name=ENSG00000284380
HG00140_chrY_random0000005	CAT	exon	678739	678900	.	-	.	source_transcript=ENST00000623198.2;source_transcript_name=ENST00000623198;source_gene=ENSG00000284380.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284380.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000623198.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000623198.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284380;alternative_source_transcripts=ENST00000624333.2;transcript_id=HG00140_ch_T0001690;gene_id=HG00140_ch_G0000606;Parent=HG00140_ch_T0001690;transcript_name=HG00140_ch_T0001690;gene_name=ENSG00000284380;ID=exon:HG00140_ch_T0001690:0;Name=ENSG00000284380;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	678901	686700	.	-	.	source_transcript=ENST00000623198.2;source_transcript_name=ENST00000623198;source_gene=ENSG00000284380.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284380.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000623198.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000623198.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284380;alternative_source_transcripts=ENST00000624333.2;transcript_id=HG00140_ch_T0001690;gene_id=HG00140_ch_G0000606;Parent=HG00140_ch_T0001690;transcript_name=HG00140_ch_T0001690;gene_name=ENSG00000284380;ID=intron:HG00140_ch_T0001690:0;Name=ENSG00000284380;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	686701	686850	.	-	.	source_transcript=ENST00000623198.2;source_transcript_name=ENST00000623198;source_gene=ENSG00000284380.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284380.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000623198.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000623198.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284380;alternative_source_transcripts=ENST00000624333.2;transcript_id=HG00140_ch_T0001690;gene_id=HG00140_ch_G0000606;Parent=HG00140_ch_T0001690;transcript_name=HG00140_ch_T0001690;gene_name=ENSG00000284380;ID=exon:HG00140_ch_T0001690:1;Name=ENSG00000284380;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	686851	688271	.	-	.	source_transcript=ENST00000623198.2;source_transcript_name=ENST00000623198;source_gene=ENSG00000284380.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284380.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000623198.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000623198.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284380;alternative_source_transcripts=ENST00000624333.2;transcript_id=HG00140_ch_T0001690;gene_id=HG00140_ch_G0000606;Parent=HG00140_ch_T0001690;transcript_name=HG00140_ch_T0001690;gene_name=ENSG00000284380;ID=intron:HG00140_ch_T0001690:1;Name=ENSG00000284380;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	688272	688356	.	-	.	source_transcript=ENST00000623198.2;source_transcript_name=ENST00000623198;source_gene=ENSG00000284380.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284380.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000623198.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000623198.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284380;alternative_source_transcripts=ENST00000624333.2;transcript_id=HG00140_ch_T0001690;gene_id=HG00140_ch_G0000606;Parent=HG00140_ch_T0001690;transcript_name=HG00140_ch_T0001690;gene_name=ENSG00000284380;ID=exon:HG00140_ch_T0001690:2;Name=ENSG00000284380;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	691785	697799	.	-	.	source_gene_common_name=GOLGA2P2Y;source_gene=ENSG00000239533.7;gene_id=HG00140_ch_G0000607;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=GOLGA2P2Y;gene_sources=liftoff;ID=HG00140_ch_G0000607;Name=GOLGA2P2Y
HG00140_chrY_random0000005	CAT	transcript	691785	697799	1000	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00140_ch_T0001692;gene_id=HG00140_ch_G0000607;Parent=HG00140_ch_G0000607;transcript_name=HG00140_ch_T0001692;gene_name=GOLGA2P2Y;ID=HG00140_ch_T0001692;Name=GOLGA2P2Y
HG00140_chrY_random0000005	CAT	exon	691785	691841	.	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00140_ch_T0001692;gene_id=HG00140_ch_G0000607;Parent=HG00140_ch_T0001692;transcript_name=HG00140_ch_T0001692;gene_name=GOLGA2P2Y;ID=exon:HG00140_ch_T0001692:0;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	691842	691942	.	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00140_ch_T0001692;gene_id=HG00140_ch_G0000607;Parent=HG00140_ch_T0001692;transcript_name=HG00140_ch_T0001692;gene_name=GOLGA2P2Y;ID=intron:HG00140_ch_T0001692:0;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	691943	692089	.	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00140_ch_T0001692;gene_id=HG00140_ch_G0000607;Parent=HG00140_ch_T0001692;transcript_name=HG00140_ch_T0001692;gene_name=GOLGA2P2Y;ID=exon:HG00140_ch_T0001692:1;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	692090	692172	.	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00140_ch_T0001692;gene_id=HG00140_ch_G0000607;Parent=HG00140_ch_T0001692;transcript_name=HG00140_ch_T0001692;gene_name=GOLGA2P2Y;ID=intron:HG00140_ch_T0001692:1;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	692173	692268	.	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00140_ch_T0001692;gene_id=HG00140_ch_G0000607;Parent=HG00140_ch_T0001692;transcript_name=HG00140_ch_T0001692;gene_name=GOLGA2P2Y;ID=exon:HG00140_ch_T0001692:2;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	692269	692350	.	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00140_ch_T0001692;gene_id=HG00140_ch_G0000607;Parent=HG00140_ch_T0001692;transcript_name=HG00140_ch_T0001692;gene_name=GOLGA2P2Y;ID=intron:HG00140_ch_T0001692:2;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	692351	692443	.	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00140_ch_T0001692;gene_id=HG00140_ch_G0000607;Parent=HG00140_ch_T0001692;transcript_name=HG00140_ch_T0001692;gene_name=GOLGA2P2Y;ID=exon:HG00140_ch_T0001692:3;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	692444	692532	.	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00140_ch_T0001692;gene_id=HG00140_ch_G0000607;Parent=HG00140_ch_T0001692;transcript_name=HG00140_ch_T0001692;gene_name=GOLGA2P2Y;ID=intron:HG00140_ch_T0001692:3;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	692533	692721	.	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00140_ch_T0001692;gene_id=HG00140_ch_G0000607;Parent=HG00140_ch_T0001692;transcript_name=HG00140_ch_T0001692;gene_name=GOLGA2P2Y;ID=exon:HG00140_ch_T0001692:4;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	692722	692976	.	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00140_ch_T0001692;gene_id=HG00140_ch_G0000607;Parent=HG00140_ch_T0001692;transcript_name=HG00140_ch_T0001692;gene_name=GOLGA2P2Y;ID=intron:HG00140_ch_T0001692:4;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	692977	693065	.	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00140_ch_T0001692;gene_id=HG00140_ch_G0000607;Parent=HG00140_ch_T0001692;transcript_name=HG00140_ch_T0001692;gene_name=GOLGA2P2Y;ID=exon:HG00140_ch_T0001692:5;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	693066	693485	.	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00140_ch_T0001692;gene_id=HG00140_ch_G0000607;Parent=HG00140_ch_T0001692;transcript_name=HG00140_ch_T0001692;gene_name=GOLGA2P2Y;ID=intron:HG00140_ch_T0001692:5;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	693486	693560	.	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00140_ch_T0001692;gene_id=HG00140_ch_G0000607;Parent=HG00140_ch_T0001692;transcript_name=HG00140_ch_T0001692;gene_name=GOLGA2P2Y;ID=exon:HG00140_ch_T0001692:6;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	693561	694916	.	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00140_ch_T0001692;gene_id=HG00140_ch_G0000607;Parent=HG00140_ch_T0001692;transcript_name=HG00140_ch_T0001692;gene_name=GOLGA2P2Y;ID=intron:HG00140_ch_T0001692:6;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	694917	694974	.	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00140_ch_T0001692;gene_id=HG00140_ch_G0000607;Parent=HG00140_ch_T0001692;transcript_name=HG00140_ch_T0001692;gene_name=GOLGA2P2Y;ID=exon:HG00140_ch_T0001692:7;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	694975	695272	.	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00140_ch_T0001692;gene_id=HG00140_ch_G0000607;Parent=HG00140_ch_T0001692;transcript_name=HG00140_ch_T0001692;gene_name=GOLGA2P2Y;ID=intron:HG00140_ch_T0001692:7;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	695273	695623	.	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00140_ch_T0001692;gene_id=HG00140_ch_G0000607;Parent=HG00140_ch_T0001692;transcript_name=HG00140_ch_T0001692;gene_name=GOLGA2P2Y;ID=exon:HG00140_ch_T0001692:8;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	695624	696010	.	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00140_ch_T0001692;gene_id=HG00140_ch_G0000607;Parent=HG00140_ch_T0001692;transcript_name=HG00140_ch_T0001692;gene_name=GOLGA2P2Y;ID=intron:HG00140_ch_T0001692:8;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	696011	696100	.	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00140_ch_T0001692;gene_id=HG00140_ch_G0000607;Parent=HG00140_ch_T0001692;transcript_name=HG00140_ch_T0001692;gene_name=GOLGA2P2Y;ID=exon:HG00140_ch_T0001692:9;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	696101	696741	.	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00140_ch_T0001692;gene_id=HG00140_ch_G0000607;Parent=HG00140_ch_T0001692;transcript_name=HG00140_ch_T0001692;gene_name=GOLGA2P2Y;ID=intron:HG00140_ch_T0001692:9;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	696742	696822	.	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00140_ch_T0001692;gene_id=HG00140_ch_G0000607;Parent=HG00140_ch_T0001692;transcript_name=HG00140_ch_T0001692;gene_name=GOLGA2P2Y;ID=exon:HG00140_ch_T0001692:10;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	696823	697006	.	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00140_ch_T0001692;gene_id=HG00140_ch_G0000607;Parent=HG00140_ch_T0001692;transcript_name=HG00140_ch_T0001692;gene_name=GOLGA2P2Y;ID=intron:HG00140_ch_T0001692:10;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	697007	697066	.	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00140_ch_T0001692;gene_id=HG00140_ch_G0000607;Parent=HG00140_ch_T0001692;transcript_name=HG00140_ch_T0001692;gene_name=GOLGA2P2Y;ID=exon:HG00140_ch_T0001692:11;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	697067	697679	.	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00140_ch_T0001692;gene_id=HG00140_ch_G0000607;Parent=HG00140_ch_T0001692;transcript_name=HG00140_ch_T0001692;gene_name=GOLGA2P2Y;ID=intron:HG00140_ch_T0001692:11;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	697680	697799	.	-	.	source_transcript=ENST00000423852.4;source_transcript_name=GOLGA2P2Y-201;source_gene=ENSG00000239533.7;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000239533.7;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000423852.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000423852.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00140_ch_T0001692;gene_id=HG00140_ch_G0000607;Parent=HG00140_ch_T0001692;transcript_name=HG00140_ch_T0001692;gene_name=GOLGA2P2Y;ID=exon:HG00140_ch_T0001692:12;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	692185	697049	.	-	.	source_gene_common_name=GOLGA2P2Y;source_gene=ENSG00000291016.1;gene_id=HG00140_ch_G0000608;gene_biotype=lncRNA;gene_name=GOLGA2P2Y;gene_sources=liftoff;ID=HG00140_ch_G0000608;Name=GOLGA2P2Y
HG00140_chrY_random0000005	CAT	transcript	692185	697049	1000	-	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00140_ch_T0001693;gene_id=HG00140_ch_G0000608;Parent=HG00140_ch_G0000608;transcript_name=HG00140_ch_T0001693;gene_name=GOLGA2P2Y;ID=HG00140_ch_T0001693;Name=GOLGA2P2Y
HG00140_chrY_random0000005	CAT	exon	692185	692268	.	-	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00140_ch_T0001693;gene_id=HG00140_ch_G0000608;Parent=HG00140_ch_T0001693;transcript_name=HG00140_ch_T0001693;gene_name=GOLGA2P2Y;ID=exon:HG00140_ch_T0001693:0;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	692269	692350	.	-	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00140_ch_T0001693;gene_id=HG00140_ch_G0000608;Parent=HG00140_ch_T0001693;transcript_name=HG00140_ch_T0001693;gene_name=GOLGA2P2Y;ID=intron:HG00140_ch_T0001693:0;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	692351	692443	.	-	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00140_ch_T0001693;gene_id=HG00140_ch_G0000608;Parent=HG00140_ch_T0001693;transcript_name=HG00140_ch_T0001693;gene_name=GOLGA2P2Y;ID=exon:HG00140_ch_T0001693:1;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	692444	692532	.	-	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00140_ch_T0001693;gene_id=HG00140_ch_G0000608;Parent=HG00140_ch_T0001693;transcript_name=HG00140_ch_T0001693;gene_name=GOLGA2P2Y;ID=intron:HG00140_ch_T0001693:1;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	692533	692721	.	-	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00140_ch_T0001693;gene_id=HG00140_ch_G0000608;Parent=HG00140_ch_T0001693;transcript_name=HG00140_ch_T0001693;gene_name=GOLGA2P2Y;ID=exon:HG00140_ch_T0001693:2;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	692722	692976	.	-	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00140_ch_T0001693;gene_id=HG00140_ch_G0000608;Parent=HG00140_ch_T0001693;transcript_name=HG00140_ch_T0001693;gene_name=GOLGA2P2Y;ID=intron:HG00140_ch_T0001693:2;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	692977	693065	.	-	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00140_ch_T0001693;gene_id=HG00140_ch_G0000608;Parent=HG00140_ch_T0001693;transcript_name=HG00140_ch_T0001693;gene_name=GOLGA2P2Y;ID=exon:HG00140_ch_T0001693:3;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	693066	693485	.	-	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00140_ch_T0001693;gene_id=HG00140_ch_G0000608;Parent=HG00140_ch_T0001693;transcript_name=HG00140_ch_T0001693;gene_name=GOLGA2P2Y;ID=intron:HG00140_ch_T0001693:3;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	693486	693560	.	-	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00140_ch_T0001693;gene_id=HG00140_ch_G0000608;Parent=HG00140_ch_T0001693;transcript_name=HG00140_ch_T0001693;gene_name=GOLGA2P2Y;ID=exon:HG00140_ch_T0001693:4;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	693561	694916	.	-	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00140_ch_T0001693;gene_id=HG00140_ch_G0000608;Parent=HG00140_ch_T0001693;transcript_name=HG00140_ch_T0001693;gene_name=GOLGA2P2Y;ID=intron:HG00140_ch_T0001693:4;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	694917	694974	.	-	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00140_ch_T0001693;gene_id=HG00140_ch_G0000608;Parent=HG00140_ch_T0001693;transcript_name=HG00140_ch_T0001693;gene_name=GOLGA2P2Y;ID=exon:HG00140_ch_T0001693:5;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	694975	695272	.	-	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00140_ch_T0001693;gene_id=HG00140_ch_G0000608;Parent=HG00140_ch_T0001693;transcript_name=HG00140_ch_T0001693;gene_name=GOLGA2P2Y;ID=intron:HG00140_ch_T0001693:5;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	695273	695622	.	-	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00140_ch_T0001693;gene_id=HG00140_ch_G0000608;Parent=HG00140_ch_T0001693;transcript_name=HG00140_ch_T0001693;gene_name=GOLGA2P2Y;ID=exon:HG00140_ch_T0001693:6;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	695623	696741	.	-	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00140_ch_T0001693;gene_id=HG00140_ch_G0000608;Parent=HG00140_ch_T0001693;transcript_name=HG00140_ch_T0001693;gene_name=GOLGA2P2Y;ID=intron:HG00140_ch_T0001693:6;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	696742	696820	.	-	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00140_ch_T0001693;gene_id=HG00140_ch_G0000608;Parent=HG00140_ch_T0001693;transcript_name=HG00140_ch_T0001693;gene_name=GOLGA2P2Y;ID=exon:HG00140_ch_T0001693:7;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	696821	697006	.	-	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00140_ch_T0001693;gene_id=HG00140_ch_G0000608;Parent=HG00140_ch_T0001693;transcript_name=HG00140_ch_T0001693;gene_name=GOLGA2P2Y;ID=intron:HG00140_ch_T0001693:7;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	697007	697049	.	-	.	source_transcript=ENST00000398377.4;source_transcript_name=GOLGA2P2Y-202;source_gene=ENSG00000291016.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000291016.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000398377.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000398377.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;transcript_id=HG00140_ch_T0001693;gene_id=HG00140_ch_G0000608;Parent=HG00140_ch_T0001693;transcript_name=HG00140_ch_T0001693;gene_name=GOLGA2P2Y;ID=exon:HG00140_ch_T0001693:8;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	693176	693434	.	-	.	source_gene_common_name=RN7SL818P;source_gene=ENSG00000274234.1;alternative_source_transcripts=ENST00000485099.3;gene_id=HG00140_ch_G0000609;gene_biotype=misc_RNA;gene_name=RN7SL818P;gene_sources=liftoff;ID=HG00140_ch_G0000609;Name=RN7SL818P
HG00140_chrY_random0000005	CAT	transcript	693176	693434	1000	-	.	source_transcript=ENST00000485099.3;source_transcript_name=RN7SL818P-201;source_gene=ENSG00000274234.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000274234.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000485099.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000485099.3;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RN7SL818P;alternative_source_transcripts=ENST00000485099.3;transcript_id=HG00140_ch_T0001694;gene_id=HG00140_ch_G0000609;Parent=HG00140_ch_G0000609;transcript_name=HG00140_ch_T0001694;gene_name=RN7SL818P;ID=HG00140_ch_T0001694;Name=RN7SL818P
HG00140_chrY_random0000005	CAT	exon	693176	693434	.	-	.	source_transcript=ENST00000485099.3;source_transcript_name=RN7SL818P-201;source_gene=ENSG00000274234.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000274234.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000485099.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000485099.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RN7SL818P;alternative_source_transcripts=ENST00000485099.3;transcript_id=HG00140_ch_T0001694;gene_id=HG00140_ch_G0000609;Parent=HG00140_ch_T0001694;transcript_name=HG00140_ch_T0001694;gene_name=RN7SL818P;ID=exon:HG00140_ch_T0001694:0;Name=RN7SL818P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	715045	721206	.	-	.	source_gene_common_name=UBE2Q2P5Y;source_gene=ENSG00000223636.1;alternative_source_transcripts=ENST00000433767.1;gene_id=HG00140_ch_G0000610;gene_biotype=unprocessed_pseudogene;gene_name=UBE2Q2P5Y;gene_sources=liftoff;ID=HG00140_ch_G0000610;Name=UBE2Q2P5Y
HG00140_chrY_random0000005	CAT	transcript	715045	721206	1000	-	.	source_transcript=ENST00000413867.1;source_transcript_name=UBE2Q2P5Y-201;source_gene=ENSG00000223636.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223636.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413867.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413867.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UBE2Q2P5Y;alternative_source_transcripts=ENST00000433767.1;transcript_id=HG00140_ch_T0001695;gene_id=HG00140_ch_G0000610;Parent=HG00140_ch_G0000610;transcript_name=HG00140_ch_T0001695;gene_name=UBE2Q2P5Y;ID=HG00140_ch_T0001695;Name=UBE2Q2P5Y
HG00140_chrY_random0000005	CAT	exon	715045	715149	.	-	.	source_transcript=ENST00000413867.1;source_transcript_name=UBE2Q2P5Y-201;source_gene=ENSG00000223636.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223636.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413867.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413867.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UBE2Q2P5Y;alternative_source_transcripts=ENST00000433767.1;transcript_id=HG00140_ch_T0001695;gene_id=HG00140_ch_G0000610;Parent=HG00140_ch_T0001695;transcript_name=HG00140_ch_T0001695;gene_name=UBE2Q2P5Y;ID=exon:HG00140_ch_T0001695:0;Name=UBE2Q2P5Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	715150	721104	.	-	.	source_transcript=ENST00000413867.1;source_transcript_name=UBE2Q2P5Y-201;source_gene=ENSG00000223636.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223636.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413867.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413867.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UBE2Q2P5Y;alternative_source_transcripts=ENST00000433767.1;transcript_id=HG00140_ch_T0001695;gene_id=HG00140_ch_G0000610;Parent=HG00140_ch_T0001695;transcript_name=HG00140_ch_T0001695;gene_name=UBE2Q2P5Y;ID=intron:HG00140_ch_T0001695:0;Name=UBE2Q2P5Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	721105	721206	.	-	.	source_transcript=ENST00000413867.1;source_transcript_name=UBE2Q2P5Y-201;source_gene=ENSG00000223636.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223636.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413867.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413867.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UBE2Q2P5Y;alternative_source_transcripts=ENST00000433767.1;transcript_id=HG00140_ch_T0001695;gene_id=HG00140_ch_G0000610;Parent=HG00140_ch_T0001695;transcript_name=HG00140_ch_T0001695;gene_name=UBE2Q2P5Y;ID=exon:HG00140_ch_T0001695:1;Name=UBE2Q2P5Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	757650	774817	.	+	.	source_gene_common_name=ENSG00000293927;source_gene=ENSG00000293927.1;gene_id=HG00140_ch_G0000611;gene_biotype=lncRNA;gene_name=ENSG00000293927;gene_sources=liftoff;ID=HG00140_ch_G0000611;Name=ENSG00000293927
HG00140_chrY_random0000005	CAT	transcript	757650	774817	1000	+	.	source_transcript=ENST00000719987.1;source_transcript_name=ENST00000719987;source_gene=ENSG00000293927.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293927.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000719987.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000719987.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293927;transcript_id=HG00140_ch_T0001696;gene_id=HG00140_ch_G0000611;Parent=HG00140_ch_G0000611;transcript_name=HG00140_ch_T0001696;gene_name=ENSG00000293927;ID=HG00140_ch_T0001696;Name=ENSG00000293927
HG00140_chrY_random0000005	CAT	exon	757650	757748	.	+	.	source_transcript=ENST00000719987.1;source_transcript_name=ENST00000719987;source_gene=ENSG00000293927.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293927.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000719987.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000719987.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293927;transcript_id=HG00140_ch_T0001696;gene_id=HG00140_ch_G0000611;Parent=HG00140_ch_T0001696;transcript_name=HG00140_ch_T0001696;gene_name=ENSG00000293927;ID=exon:HG00140_ch_T0001696:0;Name=ENSG00000293927;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	757749	765289	.	+	.	source_transcript=ENST00000719987.1;source_transcript_name=ENST00000719987;source_gene=ENSG00000293927.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293927.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000719987.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000719987.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293927;transcript_id=HG00140_ch_T0001696;gene_id=HG00140_ch_G0000611;Parent=HG00140_ch_T0001696;transcript_name=HG00140_ch_T0001696;gene_name=ENSG00000293927;ID=intron:HG00140_ch_T0001696:0;Name=ENSG00000293927;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	765290	765458	.	+	.	source_transcript=ENST00000719987.1;source_transcript_name=ENST00000719987;source_gene=ENSG00000293927.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293927.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000719987.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000719987.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293927;transcript_id=HG00140_ch_T0001696;gene_id=HG00140_ch_G0000611;Parent=HG00140_ch_T0001696;transcript_name=HG00140_ch_T0001696;gene_name=ENSG00000293927;ID=exon:HG00140_ch_T0001696:1;Name=ENSG00000293927;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	765459	773495	.	+	.	source_transcript=ENST00000719987.1;source_transcript_name=ENST00000719987;source_gene=ENSG00000293927.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293927.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000719987.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000719987.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293927;transcript_id=HG00140_ch_T0001696;gene_id=HG00140_ch_G0000611;Parent=HG00140_ch_T0001696;transcript_name=HG00140_ch_T0001696;gene_name=ENSG00000293927;ID=intron:HG00140_ch_T0001696:1;Name=ENSG00000293927;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	773496	774817	.	+	.	source_transcript=ENST00000719987.1;source_transcript_name=ENST00000719987;source_gene=ENSG00000293927.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293927.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000719987.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000719987.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293927;transcript_id=HG00140_ch_T0001696;gene_id=HG00140_ch_G0000611;Parent=HG00140_ch_T0001696;transcript_name=HG00140_ch_T0001696;gene_name=ENSG00000293927;ID=exon:HG00140_ch_T0001696:2;Name=ENSG00000293927;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	758472	759253	.	+	.	source_gene_common_name=LINC00265-2P;source_gene=ENSG00000224827.1;alternative_source_transcripts=ENST00000413372.1;gene_id=HG00140_ch_G0000612;gene_biotype=processed_pseudogene;gene_name=LINC00265-2P;gene_sources=liftoff;ID=HG00140_ch_G0000612;Name=LINC00265-2P
HG00140_chrY_random0000005	CAT	transcript	758472	759253	1000	+	.	source_transcript=ENST00000413372.1;source_transcript_name=LINC00265-2P-201;source_gene=ENSG00000224827.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224827.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000413372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413372.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00265-2P;alternative_source_transcripts=ENST00000413372.1;transcript_id=HG00140_ch_T0001697;gene_id=HG00140_ch_G0000612;Parent=HG00140_ch_G0000612;transcript_name=HG00140_ch_T0001697;gene_name=LINC00265-2P;ID=HG00140_ch_T0001697;Name=LINC00265-2P
HG00140_chrY_random0000005	CAT	exon	758472	759253	.	+	.	source_transcript=ENST00000413372.1;source_transcript_name=LINC00265-2P-201;source_gene=ENSG00000224827.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224827.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000413372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413372.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00265-2P;alternative_source_transcripts=ENST00000413372.1;transcript_id=HG00140_ch_T0001697;gene_id=HG00140_ch_G0000612;Parent=HG00140_ch_T0001697;transcript_name=HG00140_ch_T0001697;gene_name=LINC00265-2P;ID=exon:HG00140_ch_T0001697:0;Name=LINC00265-2P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	760564	763383	.	-	.	source_gene_common_name=CICP1;source_gene=ENSG00000233652.1;gene_id=HG00140_ch_G0000613;gene_biotype=processed_pseudogene;gene_name=CICP1;gene_sources=liftoff;ID=HG00140_ch_G0000613;Name=CICP1
HG00140_chrY_random0000005	CAT	transcript	760564	763383	1000	-	.	source_transcript=ENST00000416803.1;source_transcript_name=CICP1-201;source_gene=ENSG00000233652.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233652.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000416803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416803.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP1;transcript_id=HG00140_ch_T0001698;gene_id=HG00140_ch_G0000613;Parent=HG00140_ch_G0000613;transcript_name=HG00140_ch_T0001698;gene_name=CICP1;ID=HG00140_ch_T0001698;Name=CICP1
HG00140_chrY_random0000005	CAT	exon	760564	760690	.	-	.	source_transcript=ENST00000416803.1;source_transcript_name=CICP1-201;source_gene=ENSG00000233652.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233652.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000416803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416803.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP1;transcript_id=HG00140_ch_T0001698;gene_id=HG00140_ch_G0000613;Parent=HG00140_ch_T0001698;transcript_name=HG00140_ch_T0001698;gene_name=CICP1;ID=exon:HG00140_ch_T0001698:0;Name=CICP1;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	760691	761100	.	-	.	source_transcript=ENST00000416803.1;source_transcript_name=CICP1-201;source_gene=ENSG00000233652.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233652.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000416803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416803.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP1;transcript_id=HG00140_ch_T0001698;gene_id=HG00140_ch_G0000613;Parent=HG00140_ch_T0001698;transcript_name=HG00140_ch_T0001698;gene_name=CICP1;ID=intron:HG00140_ch_T0001698:0;Name=CICP1;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	761101	763383	.	-	.	source_transcript=ENST00000416803.1;source_transcript_name=CICP1-201;source_gene=ENSG00000233652.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233652.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000416803.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416803.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP1;transcript_id=HG00140_ch_T0001698;gene_id=HG00140_ch_G0000613;Parent=HG00140_ch_T0001698;transcript_name=HG00140_ch_T0001698;gene_name=CICP1;ID=exon:HG00140_ch_T0001698:1;Name=CICP1;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	765290	765458	.	+	.	source_gene_common_name=SEPTIN14P22;source_gene=ENSG00000248792.2;alternative_source_transcripts=ENST00000509776.2,ENST00000509776.2;gene_id=HG00140_ch_G0000614;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=SEPTIN14P22;gene_sources=liftoff;ID=HG00140_ch_G0000614;Name=SEPTIN14P22
HG00140_chrY_random0000005	CAT	transcript	765290	765458	1000	+	.	source_transcript=ENST00000509776.2;source_transcript_name=SEPTIN14P22-201;source_gene=ENSG00000248792.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000248792.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000509776.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000509776.2;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P22;alternative_source_transcripts=ENST00000509776.2,ENST00000509776.2;transcript_id=HG00140_ch_T0001699;gene_id=HG00140_ch_G0000614;Parent=HG00140_ch_G0000614;transcript_name=HG00140_ch_T0001699;gene_name=SEPTIN14P22;ID=HG00140_ch_T0001699;Name=SEPTIN14P22
HG00140_chrY_random0000005	CAT	exon	765290	765458	.	+	.	source_transcript=ENST00000509776.2;source_transcript_name=SEPTIN14P22-201;source_gene=ENSG00000248792.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000248792.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000509776.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000509776.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P22;alternative_source_transcripts=ENST00000509776.2,ENST00000509776.2;transcript_id=HG00140_ch_T0001699;gene_id=HG00140_ch_G0000614;Parent=HG00140_ch_T0001699;transcript_name=HG00140_ch_T0001699;gene_name=SEPTIN14P22;ID=exon:HG00140_ch_T0001699:0;Name=SEPTIN14P22;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	803535	888137	.	-	.	source_gene_common_name=ENSG00000306715;source_gene=ENSG00000306715.1;gene_id=HG00140_ch_G0000615;gene_biotype=lncRNA;gene_name=ENSG00000306715;gene_sources=liftoff;ID=HG00140_ch_G0000615;Name=ENSG00000306715
HG00140_chrY_random0000005	CAT	transcript	803535	888137	1000	-	.	source_transcript=ENST00000820371.1;source_transcript_name=ENST00000820371;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820371.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;transcript_id=HG00140_ch_T0001700;gene_id=HG00140_ch_G0000615;Parent=HG00140_ch_G0000615;transcript_name=HG00140_ch_T0001700;gene_name=ENSG00000306715;ID=HG00140_ch_T0001700;Name=ENSG00000306715
HG00140_chrY_random0000005	CAT	exon	803535	803946	.	-	.	source_transcript=ENST00000820371.1;source_transcript_name=ENST00000820371;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;transcript_id=HG00140_ch_T0001700;gene_id=HG00140_ch_G0000615;Parent=HG00140_ch_T0001700;transcript_name=HG00140_ch_T0001700;gene_name=ENSG00000306715;ID=exon:HG00140_ch_T0001700:0;Name=ENSG00000306715;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	803947	861781	.	-	.	source_transcript=ENST00000820371.1;source_transcript_name=ENST00000820371;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;transcript_id=HG00140_ch_T0001700;gene_id=HG00140_ch_G0000615;Parent=HG00140_ch_T0001700;transcript_name=HG00140_ch_T0001700;gene_name=ENSG00000306715;ID=intron:HG00140_ch_T0001700:0;Name=ENSG00000306715;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	861782	861886	.	-	.	source_transcript=ENST00000820371.1;source_transcript_name=ENST00000820371;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;transcript_id=HG00140_ch_T0001700;gene_id=HG00140_ch_G0000615;Parent=HG00140_ch_T0001700;transcript_name=HG00140_ch_T0001700;gene_name=ENSG00000306715;ID=exon:HG00140_ch_T0001700:1;Name=ENSG00000306715;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	861887	876328	.	-	.	source_transcript=ENST00000820371.1;source_transcript_name=ENST00000820371;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;transcript_id=HG00140_ch_T0001700;gene_id=HG00140_ch_G0000615;Parent=HG00140_ch_T0001700;transcript_name=HG00140_ch_T0001700;gene_name=ENSG00000306715;ID=intron:HG00140_ch_T0001700:1;Name=ENSG00000306715;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	876329	876436	.	-	.	source_transcript=ENST00000820371.1;source_transcript_name=ENST00000820371;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;transcript_id=HG00140_ch_T0001700;gene_id=HG00140_ch_G0000615;Parent=HG00140_ch_T0001700;transcript_name=HG00140_ch_T0001700;gene_name=ENSG00000306715;ID=exon:HG00140_ch_T0001700:2;Name=ENSG00000306715;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	876437	888038	.	-	.	source_transcript=ENST00000820371.1;source_transcript_name=ENST00000820371;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;transcript_id=HG00140_ch_T0001700;gene_id=HG00140_ch_G0000615;Parent=HG00140_ch_T0001700;transcript_name=HG00140_ch_T0001700;gene_name=ENSG00000306715;ID=intron:HG00140_ch_T0001700:2;Name=ENSG00000306715;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	888039	888137	.	-	.	source_transcript=ENST00000820371.1;source_transcript_name=ENST00000820371;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;transcript_id=HG00140_ch_T0001700;gene_id=HG00140_ch_G0000615;Parent=HG00140_ch_T0001700;transcript_name=HG00140_ch_T0001700;gene_name=ENSG00000306715;ID=exon:HG00140_ch_T0001700:3;Name=ENSG00000306715;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	856498	888106	1000	-	.	source_transcript=ENST00000820372.1;source_transcript_name=ENST00000820372;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820372.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;transcript_id=HG00140_ch_T0001702;gene_id=HG00140_ch_G0000615;Parent=HG00140_ch_G0000615;transcript_name=HG00140_ch_T0001702;gene_name=ENSG00000306715;ID=HG00140_ch_T0001702;Name=ENSG00000306715
HG00140_chrY_random0000005	CAT	exon	856498	857152	.	-	.	source_transcript=ENST00000820372.1;source_transcript_name=ENST00000820372;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;transcript_id=HG00140_ch_T0001702;gene_id=HG00140_ch_G0000615;Parent=HG00140_ch_T0001702;transcript_name=HG00140_ch_T0001702;gene_name=ENSG00000306715;ID=exon:HG00140_ch_T0001702:0;Name=ENSG00000306715;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	857153	861781	.	-	.	source_transcript=ENST00000820372.1;source_transcript_name=ENST00000820372;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;transcript_id=HG00140_ch_T0001702;gene_id=HG00140_ch_G0000615;Parent=HG00140_ch_T0001702;transcript_name=HG00140_ch_T0001702;gene_name=ENSG00000306715;ID=intron:HG00140_ch_T0001702:0;Name=ENSG00000306715;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	861782	861886	.	-	.	source_transcript=ENST00000820372.1;source_transcript_name=ENST00000820372;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;transcript_id=HG00140_ch_T0001702;gene_id=HG00140_ch_G0000615;Parent=HG00140_ch_T0001702;transcript_name=HG00140_ch_T0001702;gene_name=ENSG00000306715;ID=exon:HG00140_ch_T0001702:1;Name=ENSG00000306715;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	861887	876328	.	-	.	source_transcript=ENST00000820372.1;source_transcript_name=ENST00000820372;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;transcript_id=HG00140_ch_T0001702;gene_id=HG00140_ch_G0000615;Parent=HG00140_ch_T0001702;transcript_name=HG00140_ch_T0001702;gene_name=ENSG00000306715;ID=intron:HG00140_ch_T0001702:1;Name=ENSG00000306715;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	876329	876436	.	-	.	source_transcript=ENST00000820372.1;source_transcript_name=ENST00000820372;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;transcript_id=HG00140_ch_T0001702;gene_id=HG00140_ch_G0000615;Parent=HG00140_ch_T0001702;transcript_name=HG00140_ch_T0001702;gene_name=ENSG00000306715;ID=exon:HG00140_ch_T0001702:2;Name=ENSG00000306715;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	876437	888038	.	-	.	source_transcript=ENST00000820372.1;source_transcript_name=ENST00000820372;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;transcript_id=HG00140_ch_T0001702;gene_id=HG00140_ch_G0000615;Parent=HG00140_ch_T0001702;transcript_name=HG00140_ch_T0001702;gene_name=ENSG00000306715;ID=intron:HG00140_ch_T0001702:2;Name=ENSG00000306715;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	888039	888106	.	-	.	source_transcript=ENST00000820372.1;source_transcript_name=ENST00000820372;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;transcript_id=HG00140_ch_T0001702;gene_id=HG00140_ch_G0000615;Parent=HG00140_ch_T0001702;transcript_name=HG00140_ch_T0001702;gene_name=ENSG00000306715;ID=exon:HG00140_ch_T0001702:3;Name=ENSG00000306715;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	844575	844649	.	-	.	source_gene_common_name=ENSG00000279115;source_gene=ENSG00000279115.2_1;alternative_source_transcripts=ENST00000624575.2;gene_id=HG00140_ch_G0000616;gene_biotype=processed_pseudogene;gene_name=ENSG00000279115;gene_sources=liftoff;ID=HG00140_ch_G0000616;Name=ENSG00000279115
HG00140_chrY_random0000005	CAT	transcript	844575	844649	1000	-	.	source_transcript=ENST00000624491.2;source_transcript_name=ENST00000624491;source_gene=ENSG00000279115.2_1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000279115.2_1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000624491.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000624491.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000279115;alternative_source_transcripts=ENST00000624575.2;transcript_id=HG00140_ch_T0001701;gene_id=HG00140_ch_G0000616;Parent=HG00140_ch_G0000616;transcript_name=HG00140_ch_T0001701;gene_name=ENSG00000279115;ID=HG00140_ch_T0001701;Name=ENSG00000279115
HG00140_chrY_random0000005	CAT	exon	844575	844649	.	-	.	source_transcript=ENST00000624491.2;source_transcript_name=ENST00000624491;source_gene=ENSG00000279115.2_1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000279115.2_1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000624491.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000624491.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000279115;alternative_source_transcripts=ENST00000624575.2;transcript_id=HG00140_ch_T0001701;gene_id=HG00140_ch_G0000616;Parent=HG00140_ch_T0001701;transcript_name=HG00140_ch_T0001701;gene_name=ENSG00000279115;ID=exon:HG00140_ch_T0001701:0;Name=ENSG00000279115;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	878854	885797	.	-	.	source_gene_common_name=RBMY2YP;source_gene=ENSG00000227633.1_1;gene_id=HG00140_ch_G0000617;gene_biotype=unprocessed_pseudogene;gene_name=RBMY2YP;gene_sources=liftoff;ID=HG00140_ch_G0000617;Name=RBMY2YP
HG00140_chrY_random0000005	CAT	transcript	878854	885797	1000	-	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1_1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1_1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;transcript_id=HG00140_ch_T0001703;gene_id=HG00140_ch_G0000617;Parent=HG00140_ch_G0000617;transcript_name=HG00140_ch_T0001703;gene_name=RBMY2YP;ID=HG00140_ch_T0001703;Name=RBMY2YP
HG00140_chrY_random0000005	CAT	exon	878854	879168	.	-	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1_1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1_1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;transcript_id=HG00140_ch_T0001703;gene_id=HG00140_ch_G0000617;Parent=HG00140_ch_T0001703;transcript_name=HG00140_ch_T0001703;gene_name=RBMY2YP;ID=exon:HG00140_ch_T0001703:0;Name=RBMY2YP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	879169	879581	.	-	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1_1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1_1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;transcript_id=HG00140_ch_T0001703;gene_id=HG00140_ch_G0000617;Parent=HG00140_ch_T0001703;transcript_name=HG00140_ch_T0001703;gene_name=RBMY2YP;ID=intron:HG00140_ch_T0001703:0;Name=RBMY2YP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	879582	879670	.	-	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1_1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1_1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;transcript_id=HG00140_ch_T0001703;gene_id=HG00140_ch_G0000617;Parent=HG00140_ch_T0001703;transcript_name=HG00140_ch_T0001703;gene_name=RBMY2YP;ID=exon:HG00140_ch_T0001703:1;Name=RBMY2YP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	879671	879751	.	-	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1_1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1_1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;transcript_id=HG00140_ch_T0001703;gene_id=HG00140_ch_G0000617;Parent=HG00140_ch_T0001703;transcript_name=HG00140_ch_T0001703;gene_name=RBMY2YP;ID=intron:HG00140_ch_T0001703:1;Name=RBMY2YP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	879752	879862	.	-	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1_1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1_1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;transcript_id=HG00140_ch_T0001703;gene_id=HG00140_ch_G0000617;Parent=HG00140_ch_T0001703;transcript_name=HG00140_ch_T0001703;gene_name=RBMY2YP;ID=exon:HG00140_ch_T0001703:2;Name=RBMY2YP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	879863	882602	.	-	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1_1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1_1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;transcript_id=HG00140_ch_T0001703;gene_id=HG00140_ch_G0000617;Parent=HG00140_ch_T0001703;transcript_name=HG00140_ch_T0001703;gene_name=RBMY2YP;ID=intron:HG00140_ch_T0001703:2;Name=RBMY2YP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	882603	882784	.	-	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1_1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1_1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;transcript_id=HG00140_ch_T0001703;gene_id=HG00140_ch_G0000617;Parent=HG00140_ch_T0001703;transcript_name=HG00140_ch_T0001703;gene_name=RBMY2YP;ID=exon:HG00140_ch_T0001703:3;Name=RBMY2YP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	882785	885172	.	-	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1_1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1_1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;transcript_id=HG00140_ch_T0001703;gene_id=HG00140_ch_G0000617;Parent=HG00140_ch_T0001703;transcript_name=HG00140_ch_T0001703;gene_name=RBMY2YP;ID=intron:HG00140_ch_T0001703:3;Name=RBMY2YP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	885173	885274	.	-	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1_1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1_1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;transcript_id=HG00140_ch_T0001703;gene_id=HG00140_ch_G0000617;Parent=HG00140_ch_T0001703;transcript_name=HG00140_ch_T0001703;gene_name=RBMY2YP;ID=exon:HG00140_ch_T0001703:4;Name=RBMY2YP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	885275	885684	.	-	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1_1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1_1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;transcript_id=HG00140_ch_T0001703;gene_id=HG00140_ch_G0000617;Parent=HG00140_ch_T0001703;transcript_name=HG00140_ch_T0001703;gene_name=RBMY2YP;ID=intron:HG00140_ch_T0001703:4;Name=RBMY2YP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	885685	885797	.	-	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1_1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1_1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;transcript_id=HG00140_ch_T0001703;gene_id=HG00140_ch_G0000617;Parent=HG00140_ch_T0001703;transcript_name=HG00140_ch_T0001703;gene_name=RBMY2YP;ID=exon:HG00140_ch_T0001703:5;Name=RBMY2YP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	933120	938210	.	-	.	source_gene_common_name=ENSG00000294545;source_gene=ENSG00000294545.1;alternative_source_transcripts=ENST00000833217.1;gene_id=HG00140_ch_G0000618;gene_biotype=lncRNA;gene_name=ENSG00000294545;gene_sources=liftoff;ID=HG00140_ch_G0000618;Name=ENSG00000294545
HG00140_chrY_random0000005	CAT	transcript	933120	938210	1000	-	.	source_transcript=ENST00000724319.1;source_transcript_name=ENST00000724319;source_gene=ENSG00000294545.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294545.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000724319.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000724319.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294545;alternative_source_transcripts=ENST00000833217.1;transcript_id=HG00140_ch_T0001704;gene_id=HG00140_ch_G0000618;Parent=HG00140_ch_G0000618;transcript_name=HG00140_ch_T0001704;gene_name=ENSG00000294545;ID=HG00140_ch_T0001704;Name=ENSG00000294545
HG00140_chrY_random0000005	CAT	exon	933120	933461	.	-	.	source_transcript=ENST00000724319.1;source_transcript_name=ENST00000724319;source_gene=ENSG00000294545.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294545.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000724319.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000724319.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294545;alternative_source_transcripts=ENST00000833217.1;transcript_id=HG00140_ch_T0001704;gene_id=HG00140_ch_G0000618;Parent=HG00140_ch_T0001704;transcript_name=HG00140_ch_T0001704;gene_name=ENSG00000294545;ID=exon:HG00140_ch_T0001704:0;Name=ENSG00000294545;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	933462	938113	.	-	.	source_transcript=ENST00000724319.1;source_transcript_name=ENST00000724319;source_gene=ENSG00000294545.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294545.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000724319.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000724319.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294545;alternative_source_transcripts=ENST00000833217.1;transcript_id=HG00140_ch_T0001704;gene_id=HG00140_ch_G0000618;Parent=HG00140_ch_T0001704;transcript_name=HG00140_ch_T0001704;gene_name=ENSG00000294545;ID=intron:HG00140_ch_T0001704:0;Name=ENSG00000294545;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	938114	938210	.	-	.	source_transcript=ENST00000724319.1;source_transcript_name=ENST00000724319;source_gene=ENSG00000294545.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000294545.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000724319.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000724319.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000294545;alternative_source_transcripts=ENST00000833217.1;transcript_id=HG00140_ch_T0001704;gene_id=HG00140_ch_G0000618;Parent=HG00140_ch_T0001704;transcript_name=HG00140_ch_T0001704;gene_name=ENSG00000294545;ID=exon:HG00140_ch_T0001704:1;Name=ENSG00000294545;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	938524	970115	.	+	.	source_gene_common_name=TTTY17C;source_gene=ENSG00000223641.3;gene_id=HG00140_ch_G0000619;gene_biotype=lncRNA;gene_name=TTTY17C;gene_sources=liftoff;ID=HG00140_ch_G0000619;Name=TTTY17C
HG00140_chrY_random0000005	CAT	transcript	938524	970115	1000	+	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG00140_ch_T0001705;gene_id=HG00140_ch_G0000619;Parent=HG00140_ch_G0000619;transcript_name=HG00140_ch_T0001705;gene_name=TTTY17C;ID=HG00140_ch_T0001705;Name=TTTY17C
HG00140_chrY_random0000005	CAT	exon	938524	938593	.	+	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG00140_ch_T0001705;gene_id=HG00140_ch_G0000619;Parent=HG00140_ch_T0001705;transcript_name=HG00140_ch_T0001705;gene_name=TTTY17C;ID=exon:HG00140_ch_T0001705:0;Name=TTTY17C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	938594	938987	.	+	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG00140_ch_T0001705;gene_id=HG00140_ch_G0000619;Parent=HG00140_ch_T0001705;transcript_name=HG00140_ch_T0001705;gene_name=TTTY17C;ID=intron:HG00140_ch_T0001705:0;Name=TTTY17C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	938988	939057	.	+	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG00140_ch_T0001705;gene_id=HG00140_ch_G0000619;Parent=HG00140_ch_T0001705;transcript_name=HG00140_ch_T0001705;gene_name=TTTY17C;ID=exon:HG00140_ch_T0001705:1;Name=TTTY17C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	939058	957295	.	+	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG00140_ch_T0001705;gene_id=HG00140_ch_G0000619;Parent=HG00140_ch_T0001705;transcript_name=HG00140_ch_T0001705;gene_name=TTTY17C;ID=intron:HG00140_ch_T0001705:1;Name=TTTY17C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	957296	957412	.	+	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG00140_ch_T0001705;gene_id=HG00140_ch_G0000619;Parent=HG00140_ch_T0001705;transcript_name=HG00140_ch_T0001705;gene_name=TTTY17C;ID=exon:HG00140_ch_T0001705:2;Name=TTTY17C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	957413	967542	.	+	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG00140_ch_T0001705;gene_id=HG00140_ch_G0000619;Parent=HG00140_ch_T0001705;transcript_name=HG00140_ch_T0001705;gene_name=TTTY17C;ID=intron:HG00140_ch_T0001705:2;Name=TTTY17C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	967543	967667	.	+	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG00140_ch_T0001705;gene_id=HG00140_ch_G0000619;Parent=HG00140_ch_T0001705;transcript_name=HG00140_ch_T0001705;gene_name=TTTY17C;ID=exon:HG00140_ch_T0001705:3;Name=TTTY17C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	967668	968633	.	+	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG00140_ch_T0001705;gene_id=HG00140_ch_G0000619;Parent=HG00140_ch_T0001705;transcript_name=HG00140_ch_T0001705;gene_name=TTTY17C;ID=intron:HG00140_ch_T0001705:3;Name=TTTY17C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	968634	968794	.	+	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG00140_ch_T0001705;gene_id=HG00140_ch_G0000619;Parent=HG00140_ch_T0001705;transcript_name=HG00140_ch_T0001705;gene_name=TTTY17C;ID=exon:HG00140_ch_T0001705:4;Name=TTTY17C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	968795	969794	.	+	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG00140_ch_T0001705;gene_id=HG00140_ch_G0000619;Parent=HG00140_ch_T0001705;transcript_name=HG00140_ch_T0001705;gene_name=TTTY17C;ID=intron:HG00140_ch_T0001705:4;Name=TTTY17C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	969795	970115	.	+	.	source_transcript=ENST00000772950.1;source_transcript_name=TTTY17C-202;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000772950.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000772950.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG00140_ch_T0001705;gene_id=HG00140_ch_G0000619;Parent=HG00140_ch_T0001705;transcript_name=HG00140_ch_T0001705;gene_name=TTTY17C;ID=exon:HG00140_ch_T0001705:5;Name=TTTY17C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	938656	970115	1000	+	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG00140_ch_T0001706;gene_id=HG00140_ch_G0000619;Parent=HG00140_ch_G0000619;transcript_name=HG00140_ch_T0001706;gene_name=TTTY17C;ID=HG00140_ch_T0001706;Name=TTTY17C
HG00140_chrY_random0000005	CAT	exon	938656	938701	.	+	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG00140_ch_T0001706;gene_id=HG00140_ch_G0000619;Parent=HG00140_ch_T0001706;transcript_name=HG00140_ch_T0001706;gene_name=TTTY17C;ID=exon:HG00140_ch_T0001706:0;Name=TTTY17C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	938702	938987	.	+	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG00140_ch_T0001706;gene_id=HG00140_ch_G0000619;Parent=HG00140_ch_T0001706;transcript_name=HG00140_ch_T0001706;gene_name=TTTY17C;ID=intron:HG00140_ch_T0001706:0;Name=TTTY17C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	938988	939057	.	+	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG00140_ch_T0001706;gene_id=HG00140_ch_G0000619;Parent=HG00140_ch_T0001706;transcript_name=HG00140_ch_T0001706;gene_name=TTTY17C;ID=exon:HG00140_ch_T0001706:1;Name=TTTY17C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	939058	951664	.	+	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG00140_ch_T0001706;gene_id=HG00140_ch_G0000619;Parent=HG00140_ch_T0001706;transcript_name=HG00140_ch_T0001706;gene_name=TTTY17C;ID=intron:HG00140_ch_T0001706:1;Name=TTTY17C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	951665	951773	.	+	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG00140_ch_T0001706;gene_id=HG00140_ch_G0000619;Parent=HG00140_ch_T0001706;transcript_name=HG00140_ch_T0001706;gene_name=TTTY17C;ID=exon:HG00140_ch_T0001706:2;Name=TTTY17C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	951774	967542	.	+	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG00140_ch_T0001706;gene_id=HG00140_ch_G0000619;Parent=HG00140_ch_T0001706;transcript_name=HG00140_ch_T0001706;gene_name=TTTY17C;ID=intron:HG00140_ch_T0001706:2;Name=TTTY17C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	967543	967667	.	+	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG00140_ch_T0001706;gene_id=HG00140_ch_G0000619;Parent=HG00140_ch_T0001706;transcript_name=HG00140_ch_T0001706;gene_name=TTTY17C;ID=exon:HG00140_ch_T0001706:3;Name=TTTY17C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	967668	968633	.	+	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG00140_ch_T0001706;gene_id=HG00140_ch_G0000619;Parent=HG00140_ch_T0001706;transcript_name=HG00140_ch_T0001706;gene_name=TTTY17C;ID=intron:HG00140_ch_T0001706:3;Name=TTTY17C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	968634	968794	.	+	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG00140_ch_T0001706;gene_id=HG00140_ch_G0000619;Parent=HG00140_ch_T0001706;transcript_name=HG00140_ch_T0001706;gene_name=TTTY17C;ID=exon:HG00140_ch_T0001706:4;Name=TTTY17C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	968795	969794	.	+	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG00140_ch_T0001706;gene_id=HG00140_ch_G0000619;Parent=HG00140_ch_T0001706;transcript_name=HG00140_ch_T0001706;gene_name=TTTY17C;ID=intron:HG00140_ch_T0001706:4;Name=TTTY17C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	969795	970115	.	+	.	source_transcript=ENST00000421387.3;source_transcript_name=TTTY17C-201;source_gene=ENSG00000223641.3;source_gene_biotype=lncRNA;original_gene_id=ENSG00000223641.3;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421387.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421387.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;transcript_id=HG00140_ch_T0001706;gene_id=HG00140_ch_G0000619;Parent=HG00140_ch_T0001706;transcript_name=HG00140_ch_T0001706;gene_name=TTTY17C;ID=exon:HG00140_ch_T0001706:5;Name=TTTY17C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	977145	977862	.	-	.	source_gene_common_name=ENSG00000274899;source_gene=ENSG00000274899.1;gene_id=HG00140_ch_G0000620;gene_biotype=processed_pseudogene;gene_name=ENSG00000274899;gene_sources=liftoff;ID=HG00140_ch_G0000620;Name=ENSG00000274899
HG00140_chrY_random0000005	CAT	transcript	977145	977862	1000	-	.	source_transcript=ENST00000619436.1;source_transcript_name=ENST00000619436;source_gene=ENSG00000274899.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274899.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000619436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000619436.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274899;transcript_id=HG00140_ch_T0001707;gene_id=HG00140_ch_G0000620;Parent=HG00140_ch_G0000620;transcript_name=HG00140_ch_T0001707;gene_name=ENSG00000274899;ID=HG00140_ch_T0001707;Name=ENSG00000274899
HG00140_chrY_random0000005	CAT	exon	977145	977286	.	-	.	source_transcript=ENST00000619436.1;source_transcript_name=ENST00000619436;source_gene=ENSG00000274899.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274899.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000619436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000619436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274899;transcript_id=HG00140_ch_T0001707;gene_id=HG00140_ch_G0000620;Parent=HG00140_ch_T0001707;transcript_name=HG00140_ch_T0001707;gene_name=ENSG00000274899;ID=exon:HG00140_ch_T0001707:0;Name=ENSG00000274899;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	977287	977589	.	-	.	source_transcript=ENST00000619436.1;source_transcript_name=ENST00000619436;source_gene=ENSG00000274899.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274899.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000619436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000619436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274899;transcript_id=HG00140_ch_T0001707;gene_id=HG00140_ch_G0000620;Parent=HG00140_ch_T0001707;transcript_name=HG00140_ch_T0001707;gene_name=ENSG00000274899;ID=intron:HG00140_ch_T0001707:0;Name=ENSG00000274899;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	977590	977862	.	-	.	source_transcript=ENST00000619436.1;source_transcript_name=ENST00000619436;source_gene=ENSG00000274899.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000274899.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000619436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000619436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000274899;transcript_id=HG00140_ch_T0001707;gene_id=HG00140_ch_G0000620;Parent=HG00140_ch_T0001707;transcript_name=HG00140_ch_T0001707;gene_name=ENSG00000274899;ID=exon:HG00140_ch_T0001707:1;Name=ENSG00000274899;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	982541	983783	.	-	.	source_gene_common_name=ZNF736P4Y;source_gene=ENSG00000236379.2;alternative_source_transcripts=ENST00000454995.1;gene_id=HG00140_ch_G0000621;gene_biotype=processed_pseudogene;gene_name=ZNF736P4Y;gene_sources=liftoff;ID=HG00140_ch_G0000621;Name=ZNF736P4Y
HG00140_chrY_random0000005	CAT	transcript	982541	983783	1000	-	.	source_transcript=ENST00000454995.1;source_transcript_name=ZNF736P4Y-201;source_gene=ENSG00000236379.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000236379.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000454995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454995.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P4Y;alternative_source_transcripts=ENST00000454995.1;transcript_id=HG00140_ch_T0001708;gene_id=HG00140_ch_G0000621;Parent=HG00140_ch_G0000621;transcript_name=HG00140_ch_T0001708;gene_name=ZNF736P4Y;ID=HG00140_ch_T0001708;Name=ZNF736P4Y
HG00140_chrY_random0000005	CAT	exon	982541	983783	.	-	.	source_transcript=ENST00000454995.1;source_transcript_name=ZNF736P4Y-201;source_gene=ENSG00000236379.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000236379.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000454995.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454995.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P4Y;alternative_source_transcripts=ENST00000454995.1;transcript_id=HG00140_ch_T0001708;gene_id=HG00140_ch_G0000621;Parent=HG00140_ch_T0001708;transcript_name=HG00140_ch_T0001708;gene_name=ZNF736P4Y;ID=exon:HG00140_ch_T0001708:0;Name=ZNF736P4Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	1052382	1089191	.	+	.	source_gene_common_name=TTTY4C;source_gene=ENSG00000228296.1;gene_id=HG00140_ch_G0000622;gene_biotype=lncRNA;gene_name=TTTY4C;gene_sources=liftoff;ID=HG00140_ch_G0000622;Name=TTTY4C
HG00140_chrY_random0000005	CAT	transcript	1052382	1089191	1000	+	.	source_transcript=ENST00000456123.1;source_transcript_name=TTTY4C-201;source_gene=ENSG00000228296.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228296.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456123.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;transcript_id=HG00140_ch_T0001709;gene_id=HG00140_ch_G0000622;Parent=HG00140_ch_G0000622;transcript_name=HG00140_ch_T0001709;gene_name=TTTY4C;ID=HG00140_ch_T0001709;Name=TTTY4C
HG00140_chrY_random0000005	CAT	exon	1052382	1052542	.	+	.	source_transcript=ENST00000456123.1;source_transcript_name=TTTY4C-201;source_gene=ENSG00000228296.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228296.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456123.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;transcript_id=HG00140_ch_T0001709;gene_id=HG00140_ch_G0000622;Parent=HG00140_ch_T0001709;transcript_name=HG00140_ch_T0001709;gene_name=TTTY4C;ID=exon:HG00140_ch_T0001709:0;Name=TTTY4C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1052543	1079552	.	+	.	source_transcript=ENST00000456123.1;source_transcript_name=TTTY4C-201;source_gene=ENSG00000228296.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228296.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456123.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;transcript_id=HG00140_ch_T0001709;gene_id=HG00140_ch_G0000622;Parent=HG00140_ch_T0001709;transcript_name=HG00140_ch_T0001709;gene_name=TTTY4C;ID=intron:HG00140_ch_T0001709:0;Name=TTTY4C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1079553	1079628	.	+	.	source_transcript=ENST00000456123.1;source_transcript_name=TTTY4C-201;source_gene=ENSG00000228296.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228296.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456123.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;transcript_id=HG00140_ch_T0001709;gene_id=HG00140_ch_G0000622;Parent=HG00140_ch_T0001709;transcript_name=HG00140_ch_T0001709;gene_name=TTTY4C;ID=exon:HG00140_ch_T0001709:1;Name=TTTY4C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1079629	1081432	.	+	.	source_transcript=ENST00000456123.1;source_transcript_name=TTTY4C-201;source_gene=ENSG00000228296.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228296.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456123.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;transcript_id=HG00140_ch_T0001709;gene_id=HG00140_ch_G0000622;Parent=HG00140_ch_T0001709;transcript_name=HG00140_ch_T0001709;gene_name=TTTY4C;ID=intron:HG00140_ch_T0001709:1;Name=TTTY4C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1081433	1081540	.	+	.	source_transcript=ENST00000456123.1;source_transcript_name=TTTY4C-201;source_gene=ENSG00000228296.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228296.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456123.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;transcript_id=HG00140_ch_T0001709;gene_id=HG00140_ch_G0000622;Parent=HG00140_ch_T0001709;transcript_name=HG00140_ch_T0001709;gene_name=TTTY4C;ID=exon:HG00140_ch_T0001709:2;Name=TTTY4C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1081541	1088190	.	+	.	source_transcript=ENST00000456123.1;source_transcript_name=TTTY4C-201;source_gene=ENSG00000228296.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228296.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456123.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;transcript_id=HG00140_ch_T0001709;gene_id=HG00140_ch_G0000622;Parent=HG00140_ch_T0001709;transcript_name=HG00140_ch_T0001709;gene_name=TTTY4C;ID=intron:HG00140_ch_T0001709:2;Name=TTTY4C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1088191	1089191	.	+	.	source_transcript=ENST00000456123.1;source_transcript_name=TTTY4C-201;source_gene=ENSG00000228296.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228296.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000456123.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000456123.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;transcript_id=HG00140_ch_T0001709;gene_id=HG00140_ch_G0000622;Parent=HG00140_ch_T0001709;transcript_name=HG00140_ch_T0001709;gene_name=TTTY4C;ID=exon:HG00140_ch_T0001709:3;Name=TTTY4C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	1089726	1121374	.	+	.	source_gene_common_name=BPY2C;source_gene=ENSG00000185894.8;gene_id=HG00140_ch_G0000623;gene_biotype=protein_coding;gene_name=BPY2C;gene_sources=liftoff;ID=HG00140_ch_G0000623;Name=BPY2C
HG00140_chrY_random0000005	CAT	transcript	1089726	1108284	10000	+	.	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001710;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_G0000623;transcript_name=HG00140_ch_T0001710;gene_name=BPY2C;ID=HG00140_ch_T0001710;Name=BPY2C
HG00140_chrY_random0000005	CAT	exon	1089726	1089881	.	+	.	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001710;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001710;transcript_name=HG00140_ch_T0001710;gene_name=BPY2C;ID=exon:HG00140_ch_T0001710:0;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1089882	1100055	.	+	.	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001710;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001710;transcript_name=HG00140_ch_T0001710;gene_name=BPY2C;ID=intron:HG00140_ch_T0001710:0;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1100056	1100124	.	+	.	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001710;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001710;transcript_name=HG00140_ch_T0001710;gene_name=BPY2C;ID=exon:HG00140_ch_T0001710:1;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1100125	1100476	.	+	.	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001710;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001710;transcript_name=HG00140_ch_T0001710;gene_name=BPY2C;ID=intron:HG00140_ch_T0001710:1;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1100477	1100599	.	+	.	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001710;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001710;transcript_name=HG00140_ch_T0001710;gene_name=BPY2C;ID=exon:HG00140_ch_T0001710:2;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1100600	1103664	.	+	.	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001710;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001710;transcript_name=HG00140_ch_T0001710;gene_name=BPY2C;ID=intron:HG00140_ch_T0001710:2;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1103665	1103801	.	+	.	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001710;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001710;transcript_name=HG00140_ch_T0001710;gene_name=BPY2C;ID=exon:HG00140_ch_T0001710:3;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1103802	1108210	.	+	.	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001710;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001710;transcript_name=HG00140_ch_T0001710;gene_name=BPY2C;ID=intron:HG00140_ch_T0001710:3;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1108211	1108284	.	+	.	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001710;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001710;transcript_name=HG00140_ch_T0001710;gene_name=BPY2C;ID=exon:HG00140_ch_T0001710:4;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1108252	1108284	.	+	0	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001710;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001710;transcript_name=HG00140_ch_T0001710;gene_name=BPY2C;ID=CDS:HG00140_ch_T0001710:0;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	start_codon	1108252	1108254	.	+	0	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001710;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001710;transcript_name=HG00140_ch_T0001710;gene_name=BPY2C;ID=start_codon:HG00140_ch_T0001710;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	stop_codon	1108282	1108284	.	+	0	source_transcript=ENST00000602680.1;source_transcript_name=BPY2C-203;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602680.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000602680.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001710;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001710;transcript_name=HG00140_ch_T0001710;gene_name=BPY2C;ID=stop_codon:HG00140_ch_T0001710;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	1100171	1121374	10000	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001711;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_G0000623;transcript_name=HG00140_ch_T0001711;gene_name=BPY2C;ID=HG00140_ch_T0001711;Name=BPY2C
HG00140_chrY_random0000005	CAT	exon	1100171	1100201	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001711;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001711;transcript_name=HG00140_ch_T0001711;gene_name=BPY2C;ID=exon:HG00140_ch_T0001711:0;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1100202	1100476	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001711;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001711;transcript_name=HG00140_ch_T0001711;gene_name=BPY2C;ID=intron:HG00140_ch_T0001711:0;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1100477	1100599	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001711;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001711;transcript_name=HG00140_ch_T0001711;gene_name=BPY2C;ID=exon:HG00140_ch_T0001711:1;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1100600	1103664	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001711;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001711;transcript_name=HG00140_ch_T0001711;gene_name=BPY2C;ID=intron:HG00140_ch_T0001711:1;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1103665	1103801	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001711;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001711;transcript_name=HG00140_ch_T0001711;gene_name=BPY2C;ID=exon:HG00140_ch_T0001711:2;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1103802	1108210	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001711;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001711;transcript_name=HG00140_ch_T0001711;gene_name=BPY2C;ID=intron:HG00140_ch_T0001711:2;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1108211	1108329	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001711;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001711;transcript_name=HG00140_ch_T0001711;gene_name=BPY2C;ID=exon:HG00140_ch_T0001711:3;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1108252	1108329	.	+	0	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001711;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001711;transcript_name=HG00140_ch_T0001711;gene_name=BPY2C;ID=CDS:HG00140_ch_T0001711:0;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	start_codon	1108252	1108254	.	+	0	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001711;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001711;transcript_name=HG00140_ch_T0001711;gene_name=BPY2C;ID=start_codon:HG00140_ch_T0001711;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1108330	1110388	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001711;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001711;transcript_name=HG00140_ch_T0001711;gene_name=BPY2C;ID=intron:HG00140_ch_T0001711:3;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1110389	1110506	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001711;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001711;transcript_name=HG00140_ch_T0001711;gene_name=BPY2C;ID=exon:HG00140_ch_T0001711:4;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1110389	1110506	.	+	0	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001711;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001711;transcript_name=HG00140_ch_T0001711;gene_name=BPY2C;ID=CDS:HG00140_ch_T0001711:1;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1110507	1113360	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001711;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001711;transcript_name=HG00140_ch_T0001711;gene_name=BPY2C;ID=intron:HG00140_ch_T0001711:4;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1113361	1113466	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001711;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001711;transcript_name=HG00140_ch_T0001711;gene_name=BPY2C;ID=exon:HG00140_ch_T0001711:5;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1113361	1113466	.	+	2	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001711;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001711;transcript_name=HG00140_ch_T0001711;gene_name=BPY2C;ID=CDS:HG00140_ch_T0001711:2;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1113467	1114158	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001711;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001711;transcript_name=HG00140_ch_T0001711;gene_name=BPY2C;ID=intron:HG00140_ch_T0001711:5;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1114159	1114283	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001711;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001711;transcript_name=HG00140_ch_T0001711;gene_name=BPY2C;ID=exon:HG00140_ch_T0001711:6;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1114159	1114177	.	+	1	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001711;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001711;transcript_name=HG00140_ch_T0001711;gene_name=BPY2C;ID=CDS:HG00140_ch_T0001711:3;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	stop_codon	1114175	1114177	.	+	0	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001711;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001711;transcript_name=HG00140_ch_T0001711;gene_name=BPY2C;ID=stop_codon:HG00140_ch_T0001711;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1114284	1120833	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001711;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001711;transcript_name=HG00140_ch_T0001711;gene_name=BPY2C;ID=intron:HG00140_ch_T0001711:6;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1120834	1120958	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001711;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001711;transcript_name=HG00140_ch_T0001711;gene_name=BPY2C;ID=exon:HG00140_ch_T0001711:7;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1120959	1121052	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001711;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001711;transcript_name=HG00140_ch_T0001711;gene_name=BPY2C;ID=intron:HG00140_ch_T0001711:7;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1121053	1121374	.	+	.	source_transcript=ENST00000382287.5;source_transcript_name=BPY2C-201;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382287.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000382287.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001711;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001711;transcript_name=HG00140_ch_T0001711;gene_name=BPY2C;ID=exon:HG00140_ch_T0001711:8;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	1100195	1121315	1000	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001712;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_G0000623;transcript_name=HG00140_ch_T0001712;gene_name=BPY2C;ID=HG00140_ch_T0001712;Name=BPY2C
HG00140_chrY_random0000005	CAT	exon	1100195	1100201	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001712;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001712;transcript_name=HG00140_ch_T0001712;gene_name=BPY2C;ID=exon:HG00140_ch_T0001712:0;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1100202	1100476	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001712;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001712;transcript_name=HG00140_ch_T0001712;gene_name=BPY2C;ID=intron:HG00140_ch_T0001712:0;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1100477	1100599	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001712;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001712;transcript_name=HG00140_ch_T0001712;gene_name=BPY2C;ID=exon:HG00140_ch_T0001712:1;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1100600	1103664	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001712;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001712;transcript_name=HG00140_ch_T0001712;gene_name=BPY2C;ID=intron:HG00140_ch_T0001712:1;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1103665	1103801	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001712;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001712;transcript_name=HG00140_ch_T0001712;gene_name=BPY2C;ID=exon:HG00140_ch_T0001712:2;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1103802	1108210	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001712;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001712;transcript_name=HG00140_ch_T0001712;gene_name=BPY2C;ID=intron:HG00140_ch_T0001712:2;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1108211	1108329	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001712;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001712;transcript_name=HG00140_ch_T0001712;gene_name=BPY2C;ID=exon:HG00140_ch_T0001712:3;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1108330	1113360	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001712;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001712;transcript_name=HG00140_ch_T0001712;gene_name=BPY2C;ID=intron:HG00140_ch_T0001712:3;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1113361	1113466	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001712;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001712;transcript_name=HG00140_ch_T0001712;gene_name=BPY2C;ID=exon:HG00140_ch_T0001712:4;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1113467	1114158	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001712;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001712;transcript_name=HG00140_ch_T0001712;gene_name=BPY2C;ID=intron:HG00140_ch_T0001712:4;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1114159	1114283	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001712;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001712;transcript_name=HG00140_ch_T0001712;gene_name=BPY2C;ID=exon:HG00140_ch_T0001712:5;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1114284	1120833	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001712;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001712;transcript_name=HG00140_ch_T0001712;gene_name=BPY2C;ID=intron:HG00140_ch_T0001712:5;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1120834	1120963	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001712;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001712;transcript_name=HG00140_ch_T0001712;gene_name=BPY2C;ID=exon:HG00140_ch_T0001712:6;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1120964	1121052	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001712;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001712;transcript_name=HG00140_ch_T0001712;gene_name=BPY2C;ID=intron:HG00140_ch_T0001712:6;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1121053	1121315	.	+	.	source_transcript=ENST00000602559.5;source_transcript_name=BPY2C-202;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602559.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602559.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001712;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001712;transcript_name=HG00140_ch_T0001712;gene_name=BPY2C;ID=exon:HG00140_ch_T0001712:7;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	1108252	1114177	10000	+	.	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001713;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_G0000623;transcript_name=HG00140_ch_T0001713;gene_name=BPY2C;ID=HG00140_ch_T0001713;Name=BPY2C
HG00140_chrY_random0000005	CAT	exon	1108252	1108329	.	+	.	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001713;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001713;transcript_name=HG00140_ch_T0001713;gene_name=BPY2C;ID=exon:HG00140_ch_T0001713:0;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1108252	1108329	.	+	0	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001713;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001713;transcript_name=HG00140_ch_T0001713;gene_name=BPY2C;ID=CDS:HG00140_ch_T0001713:0;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	start_codon	1108252	1108254	.	+	0	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001713;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001713;transcript_name=HG00140_ch_T0001713;gene_name=BPY2C;ID=start_codon:HG00140_ch_T0001713;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1108330	1110388	.	+	.	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001713;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001713;transcript_name=HG00140_ch_T0001713;gene_name=BPY2C;ID=intron:HG00140_ch_T0001713:0;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1110389	1110506	.	+	.	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001713;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001713;transcript_name=HG00140_ch_T0001713;gene_name=BPY2C;ID=exon:HG00140_ch_T0001713:1;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1110389	1110506	.	+	0	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001713;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001713;transcript_name=HG00140_ch_T0001713;gene_name=BPY2C;ID=CDS:HG00140_ch_T0001713:1;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1110507	1113360	.	+	.	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001713;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001713;transcript_name=HG00140_ch_T0001713;gene_name=BPY2C;ID=intron:HG00140_ch_T0001713:1;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1113361	1113466	.	+	.	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001713;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001713;transcript_name=HG00140_ch_T0001713;gene_name=BPY2C;ID=exon:HG00140_ch_T0001713:2;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1113361	1113466	.	+	2	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001713;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001713;transcript_name=HG00140_ch_T0001713;gene_name=BPY2C;ID=CDS:HG00140_ch_T0001713:2;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1113467	1114158	.	+	.	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001713;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001713;transcript_name=HG00140_ch_T0001713;gene_name=BPY2C;ID=intron:HG00140_ch_T0001713:2;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1114159	1114177	.	+	.	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001713;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001713;transcript_name=HG00140_ch_T0001713;gene_name=BPY2C;ID=exon:HG00140_ch_T0001713:3;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1114159	1114177	.	+	1	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001713;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001713;transcript_name=HG00140_ch_T0001713;gene_name=BPY2C;ID=CDS:HG00140_ch_T0001713:3;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	stop_codon	1114175	1114177	.	+	0	source_transcript=ENST00000618574.1;source_transcript_name=BPY2C-204;source_gene=ENSG00000185894.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000185894.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000618574.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618574.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG00140_ch_T0001713;gene_id=HG00140_ch_G0000623;Parent=HG00140_ch_T0001713;transcript_name=HG00140_ch_T0001713;gene_name=BPY2C;ID=stop_codon:HG00140_ch_T0001713;Name=BPY2C;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	1132972	1133731	.	+	.	source_gene_common_name=ENSG00000244000;source_gene=ENSG00000244000.1;gene_id=HG00140_ch_G0000624;gene_biotype=processed_pseudogene;gene_name=ENSG00000244000;gene_sources=liftoff;ID=HG00140_ch_G0000624;Name=ENSG00000244000
HG00140_chrY_random0000005	CAT	transcript	1132972	1133731	1000	+	.	source_transcript=ENST00000422002.1;source_transcript_name=ENST00000422002;source_gene=ENSG00000244000.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000244000.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000422002.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422002.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000244000;transcript_id=HG00140_ch_T0001714;gene_id=HG00140_ch_G0000624;Parent=HG00140_ch_G0000624;transcript_name=HG00140_ch_T0001714;gene_name=ENSG00000244000;ID=HG00140_ch_T0001714;Name=ENSG00000244000
HG00140_chrY_random0000005	CAT	exon	1132972	1133731	.	+	.	source_transcript=ENST00000422002.1;source_transcript_name=ENST00000422002;source_gene=ENSG00000244000.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000244000.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000422002.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000422002.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000244000;transcript_id=HG00140_ch_T0001714;gene_id=HG00140_ch_G0000624;Parent=HG00140_ch_T0001714;transcript_name=HG00140_ch_T0001714;gene_name=ENSG00000244000;ID=exon:HG00140_ch_T0001714:0;Name=ENSG00000244000;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	1141507	1142576	.	+	.	source_gene_common_name=TRIM60P8Y;source_gene=ENSG00000232764.1;gene_id=HG00140_ch_G0000625;gene_biotype=processed_pseudogene;gene_name=TRIM60P8Y;gene_sources=liftoff;ID=HG00140_ch_G0000625;Name=TRIM60P8Y
HG00140_chrY_random0000005	CAT	transcript	1141507	1142576	1000	+	.	source_transcript=ENST00000436338.1;source_transcript_name=TRIM60P8Y-201;source_gene=ENSG00000232764.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232764.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436338.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P8Y;transcript_id=HG00140_ch_T0001715;gene_id=HG00140_ch_G0000625;Parent=HG00140_ch_G0000625;transcript_name=HG00140_ch_T0001715;gene_name=TRIM60P8Y;ID=HG00140_ch_T0001715;Name=TRIM60P8Y
HG00140_chrY_random0000005	CAT	exon	1141507	1141757	.	+	.	source_transcript=ENST00000436338.1;source_transcript_name=TRIM60P8Y-201;source_gene=ENSG00000232764.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232764.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436338.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P8Y;transcript_id=HG00140_ch_T0001715;gene_id=HG00140_ch_G0000625;Parent=HG00140_ch_T0001715;transcript_name=HG00140_ch_T0001715;gene_name=TRIM60P8Y;ID=exon:HG00140_ch_T0001715:0;Name=TRIM60P8Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1141758	1142065	.	+	.	source_transcript=ENST00000436338.1;source_transcript_name=TRIM60P8Y-201;source_gene=ENSG00000232764.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232764.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436338.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P8Y;transcript_id=HG00140_ch_T0001715;gene_id=HG00140_ch_G0000625;Parent=HG00140_ch_T0001715;transcript_name=HG00140_ch_T0001715;gene_name=TRIM60P8Y;ID=intron:HG00140_ch_T0001715:0;Name=TRIM60P8Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1142066	1142576	.	+	.	source_transcript=ENST00000436338.1;source_transcript_name=TRIM60P8Y-201;source_gene=ENSG00000232764.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232764.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436338.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436338.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P8Y;transcript_id=HG00140_ch_T0001715;gene_id=HG00140_ch_G0000625;Parent=HG00140_ch_T0001715;transcript_name=HG00140_ch_T0001715;gene_name=TRIM60P8Y;ID=exon:HG00140_ch_T0001715:1;Name=TRIM60P8Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	1165160	1167108	.	+	.	source_gene_common_name=ZNF736P3Y;source_gene=ENSG00000233126.3;gene_id=HG00140_ch_G0000626;gene_biotype=processed_pseudogene;gene_name=ZNF736P3Y;gene_sources=liftoff;ID=HG00140_ch_G0000626;Name=ZNF736P3Y
HG00140_chrY_random0000005	CAT	transcript	1165160	1167108	1000	+	.	source_transcript=ENST00000428264.1;source_transcript_name=ZNF736P3Y-201;source_gene=ENSG00000233126.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233126.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428264.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P3Y;transcript_id=HG00140_ch_T0001716;gene_id=HG00140_ch_G0000626;Parent=HG00140_ch_G0000626;transcript_name=HG00140_ch_T0001716;gene_name=ZNF736P3Y;ID=HG00140_ch_T0001716;Name=ZNF736P3Y
HG00140_chrY_random0000005	CAT	exon	1165160	1165273	.	+	.	source_transcript=ENST00000428264.1;source_transcript_name=ZNF736P3Y-201;source_gene=ENSG00000233126.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233126.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428264.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P3Y;transcript_id=HG00140_ch_T0001716;gene_id=HG00140_ch_G0000626;Parent=HG00140_ch_T0001716;transcript_name=HG00140_ch_T0001716;gene_name=ZNF736P3Y;ID=exon:HG00140_ch_T0001716:0;Name=ZNF736P3Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1165274	1165592	.	+	.	source_transcript=ENST00000428264.1;source_transcript_name=ZNF736P3Y-201;source_gene=ENSG00000233126.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233126.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428264.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P3Y;transcript_id=HG00140_ch_T0001716;gene_id=HG00140_ch_G0000626;Parent=HG00140_ch_T0001716;transcript_name=HG00140_ch_T0001716;gene_name=ZNF736P3Y;ID=intron:HG00140_ch_T0001716:0;Name=ZNF736P3Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1165593	1165649	.	+	.	source_transcript=ENST00000428264.1;source_transcript_name=ZNF736P3Y-201;source_gene=ENSG00000233126.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233126.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428264.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P3Y;transcript_id=HG00140_ch_T0001716;gene_id=HG00140_ch_G0000626;Parent=HG00140_ch_T0001716;transcript_name=HG00140_ch_T0001716;gene_name=ZNF736P3Y;ID=exon:HG00140_ch_T0001716:1;Name=ZNF736P3Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1165650	1165814	.	+	.	source_transcript=ENST00000428264.1;source_transcript_name=ZNF736P3Y-201;source_gene=ENSG00000233126.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233126.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428264.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P3Y;transcript_id=HG00140_ch_T0001716;gene_id=HG00140_ch_G0000626;Parent=HG00140_ch_T0001716;transcript_name=HG00140_ch_T0001716;gene_name=ZNF736P3Y;ID=intron:HG00140_ch_T0001716:1;Name=ZNF736P3Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1165815	1167108	.	+	.	source_transcript=ENST00000428264.1;source_transcript_name=ZNF736P3Y-201;source_gene=ENSG00000233126.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233126.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000428264.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428264.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P3Y;transcript_id=HG00140_ch_T0001716;gene_id=HG00140_ch_G0000626;Parent=HG00140_ch_T0001716;transcript_name=HG00140_ch_T0001716;gene_name=ZNF736P3Y;ID=exon:HG00140_ch_T0001716:2;Name=ZNF736P3Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	1173952	1175093	.	+	.	source_gene_common_name=TRIM60P11Y;source_gene=ENSG00000227837.1;gene_id=HG00140_ch_G0000627;gene_biotype=processed_pseudogene;gene_name=TRIM60P11Y;gene_sources=liftoff;ID=HG00140_ch_G0000627;Name=TRIM60P11Y
HG00140_chrY_random0000005	CAT	transcript	1173952	1175093	1000	+	.	source_transcript=ENST00000445313.1;source_transcript_name=TRIM60P11Y-201;source_gene=ENSG00000227837.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227837.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445313.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445313.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P11Y;transcript_id=HG00140_ch_T0001717;gene_id=HG00140_ch_G0000627;Parent=HG00140_ch_G0000627;transcript_name=HG00140_ch_T0001717;gene_name=TRIM60P11Y;ID=HG00140_ch_T0001717;Name=TRIM60P11Y
HG00140_chrY_random0000005	CAT	exon	1173952	1174236	.	+	.	source_transcript=ENST00000445313.1;source_transcript_name=TRIM60P11Y-201;source_gene=ENSG00000227837.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227837.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445313.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445313.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P11Y;transcript_id=HG00140_ch_T0001717;gene_id=HG00140_ch_G0000627;Parent=HG00140_ch_T0001717;transcript_name=HG00140_ch_T0001717;gene_name=TRIM60P11Y;ID=exon:HG00140_ch_T0001717:0;Name=TRIM60P11Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1174237	1174577	.	+	.	source_transcript=ENST00000445313.1;source_transcript_name=TRIM60P11Y-201;source_gene=ENSG00000227837.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227837.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445313.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445313.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P11Y;transcript_id=HG00140_ch_T0001717;gene_id=HG00140_ch_G0000627;Parent=HG00140_ch_T0001717;transcript_name=HG00140_ch_T0001717;gene_name=TRIM60P11Y;ID=intron:HG00140_ch_T0001717:0;Name=TRIM60P11Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1174578	1175093	.	+	.	source_transcript=ENST00000445313.1;source_transcript_name=TRIM60P11Y-201;source_gene=ENSG00000227837.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227837.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000445313.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000445313.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P11Y;transcript_id=HG00140_ch_T0001717;gene_id=HG00140_ch_G0000627;Parent=HG00140_ch_T0001717;transcript_name=HG00140_ch_T0001717;gene_name=TRIM60P11Y;ID=exon:HG00140_ch_T0001717:1;Name=TRIM60P11Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	1245234	1298053	.	-	.	source_gene_common_name=DAZ4;source_gene=ENSG00000205916.12;gene_id=HG00140_ch_G0000628;gene_biotype=protein_coding;gene_name=DAZ4;gene_sources=liftoff;ID=HG00140_ch_G0000628;Name=DAZ4
HG00140_chrY_random0000005	CAT	transcript	1245234	1298053	9920	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;frameshift=True;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001718;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_G0000628;transcript_name=HG00140_ch_T0001718;gene_name=DAZ4;ID=HG00140_ch_T0001718;Name=DAZ4
HG00140_chrY_random0000005	CAT	exon	1245234	1247090	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001718;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001718;transcript_name=HG00140_ch_T0001718;gene_name=DAZ4;ID=exon:HG00140_ch_T0001718:0;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1247091	1251062	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001718;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001718;transcript_name=HG00140_ch_T0001718;gene_name=DAZ4;ID=intron:HG00140_ch_T0001718:0;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1251063	1251161	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001718;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001718;transcript_name=HG00140_ch_T0001718;gene_name=DAZ4;ID=exon:HG00140_ch_T0001718:1;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1251098	1251161	.	-	1	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001718;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001718;transcript_name=HG00140_ch_T0001718;gene_name=DAZ4;ID=CDS:HG00140_ch_T0001718:0;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	stop_codon	1251098	1251100	.	-	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001718;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001718;transcript_name=HG00140_ch_T0001718;gene_name=DAZ4;ID=stop_codon:HG00140_ch_T0001718;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1251162	1255733	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001718;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001718;transcript_name=HG00140_ch_T0001718;gene_name=DAZ4;ID=intron:HG00140_ch_T0001718:1;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1255734	1255768	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001718;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001718;transcript_name=HG00140_ch_T0001718;gene_name=DAZ4;ID=exon:HG00140_ch_T0001718:2;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1255734	1255768	.	-	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001718;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001718;transcript_name=HG00140_ch_T0001718;gene_name=DAZ4;ID=CDS:HG00140_ch_T0001718:1;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1255769	1256513	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001718;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001718;transcript_name=HG00140_ch_T0001718;gene_name=DAZ4;ID=intron:HG00140_ch_T0001718:2;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1256514	1256585	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001718;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001718;transcript_name=HG00140_ch_T0001718;gene_name=DAZ4;ID=exon:HG00140_ch_T0001718:3;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1256514	1256585	.	-	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001718;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001718;transcript_name=HG00140_ch_T0001718;gene_name=DAZ4;ID=CDS:HG00140_ch_T0001718:2;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1256586	1263666	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001718;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001718;transcript_name=HG00140_ch_T0001718;gene_name=DAZ4;ID=intron:HG00140_ch_T0001718:3;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1263667	1263738	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001718;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001718;transcript_name=HG00140_ch_T0001718;gene_name=DAZ4;ID=exon:HG00140_ch_T0001718:4;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1263667	1263738	.	-	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001718;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001718;transcript_name=HG00140_ch_T0001718;gene_name=DAZ4;ID=CDS:HG00140_ch_T0001718:3;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1263739	1266050	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001718;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001718;transcript_name=HG00140_ch_T0001718;gene_name=DAZ4;ID=intron:HG00140_ch_T0001718:4;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1266051	1266122	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001718;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001718;transcript_name=HG00140_ch_T0001718;gene_name=DAZ4;ID=exon:HG00140_ch_T0001718:5;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1266051	1266122	.	-	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001718;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001718;transcript_name=HG00140_ch_T0001718;gene_name=DAZ4;ID=CDS:HG00140_ch_T0001718:4;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1266123	1268435	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001718;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001718;transcript_name=HG00140_ch_T0001718;gene_name=DAZ4;ID=intron:HG00140_ch_T0001718:5;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1268436	1268507	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001718;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001718;transcript_name=HG00140_ch_T0001718;gene_name=DAZ4;ID=exon:HG00140_ch_T0001718:6;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1268436	1268507	.	-	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001718;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001718;transcript_name=HG00140_ch_T0001718;gene_name=DAZ4;ID=CDS:HG00140_ch_T0001718:5;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1268508	1285396	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001718;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001718;transcript_name=HG00140_ch_T0001718;gene_name=DAZ4;ID=intron:HG00140_ch_T0001718:6;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1285397	1285468	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001718;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001718;transcript_name=HG00140_ch_T0001718;gene_name=DAZ4;ID=exon:HG00140_ch_T0001718:7;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1285397	1285468	.	-	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001718;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001718;transcript_name=HG00140_ch_T0001718;gene_name=DAZ4;ID=CDS:HG00140_ch_T0001718:6;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1285469	1287839	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001718;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001718;transcript_name=HG00140_ch_T0001718;gene_name=DAZ4;ID=intron:HG00140_ch_T0001718:7;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1287840	1287911	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001718;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001718;transcript_name=HG00140_ch_T0001718;gene_name=DAZ4;ID=exon:HG00140_ch_T0001718:8;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1287840	1287911	.	-	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001718;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001718;transcript_name=HG00140_ch_T0001718;gene_name=DAZ4;ID=CDS:HG00140_ch_T0001718:7;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1287912	1297766	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001718;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001718;transcript_name=HG00140_ch_T0001718;gene_name=DAZ4;ID=intron:HG00140_ch_T0001718:8;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1297767	1298053	.	-	.	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001718;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001718;transcript_name=HG00140_ch_T0001718;gene_name=DAZ4;ID=exon:HG00140_ch_T0001718:9;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1297767	1297769	.	-	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001718;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001718;transcript_name=HG00140_ch_T0001718;gene_name=DAZ4;ID=CDS:HG00140_ch_T0001718:8;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	start_codon	1297767	1297769	.	-	0	source_transcript=ENST00000415508.6;source_transcript_name=DAZ4-204;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000415508.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000415508.6;transcript_score=208.224;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001718;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001718;transcript_name=HG00140_ch_T0001718;gene_name=DAZ4;ID=start_codon:HG00140_ch_T0001718;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	1245234	1297977	9940	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;frameshift=True;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_G0000628;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=HG00140_ch_T0001719;Name=DAZ4
HG00140_chrY_random0000005	CAT	exon	1245234	1247090	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=exon:HG00140_ch_T0001719:0;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1247091	1251062	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=intron:HG00140_ch_T0001719:0;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1251063	1251161	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=exon:HG00140_ch_T0001719:1;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1251098	1251161	.	-	1	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=CDS:HG00140_ch_T0001719:0;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	stop_codon	1251098	1251100	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=stop_codon:HG00140_ch_T0001719;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1251162	1255733	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=intron:HG00140_ch_T0001719:1;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1255734	1255768	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=exon:HG00140_ch_T0001719:2;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1255734	1255768	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=CDS:HG00140_ch_T0001719:1;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1255769	1256513	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=intron:HG00140_ch_T0001719:2;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1256514	1256585	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=exon:HG00140_ch_T0001719:3;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1256514	1256585	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=CDS:HG00140_ch_T0001719:2;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1256586	1258897	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=intron:HG00140_ch_T0001719:3;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1258898	1258969	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=exon:HG00140_ch_T0001719:4;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1258898	1258969	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=CDS:HG00140_ch_T0001719:3;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1258970	1261282	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=intron:HG00140_ch_T0001719:4;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1261283	1261354	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=exon:HG00140_ch_T0001719:5;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1261283	1261354	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=CDS:HG00140_ch_T0001719:4;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1261355	1263666	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=intron:HG00140_ch_T0001719:5;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1263667	1263738	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=exon:HG00140_ch_T0001719:6;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1263667	1263738	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=CDS:HG00140_ch_T0001719:5;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1263739	1266050	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=intron:HG00140_ch_T0001719:6;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1266051	1266122	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=exon:HG00140_ch_T0001719:7;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1266051	1266122	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=CDS:HG00140_ch_T0001719:6;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1266123	1268435	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=intron:HG00140_ch_T0001719:7;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1268436	1268507	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=exon:HG00140_ch_T0001719:8;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1268436	1268507	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=CDS:HG00140_ch_T0001719:7;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1268508	1280610	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=intron:HG00140_ch_T0001719:8;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1280611	1280682	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=exon:HG00140_ch_T0001719:9;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1280611	1280682	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=CDS:HG00140_ch_T0001719:8;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1280683	1283006	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=intron:HG00140_ch_T0001719:9;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1283007	1283078	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=exon:HG00140_ch_T0001719:10;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1283007	1283078	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=CDS:HG00140_ch_T0001719:9;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1283079	1285396	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=intron:HG00140_ch_T0001719:10;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1285397	1285468	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=exon:HG00140_ch_T0001719:11;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1285397	1285468	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=CDS:HG00140_ch_T0001719:10;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1285469	1287839	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=intron:HG00140_ch_T0001719:11;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1287840	1287911	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=exon:HG00140_ch_T0001719:12;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1287840	1287911	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=CDS:HG00140_ch_T0001719:11;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1287912	1289311	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=intron:HG00140_ch_T0001719:12;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1289312	1289451	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=exon:HG00140_ch_T0001719:13;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1289312	1289451	.	-	2	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=CDS:HG00140_ch_T0001719:12;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1289452	1289540	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=intron:HG00140_ch_T0001719:13;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1289541	1289604	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=exon:HG00140_ch_T0001719:14;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1289541	1289604	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=CDS:HG00140_ch_T0001719:13;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1289605	1290040	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=intron:HG00140_ch_T0001719:14;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1290041	1290092	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=exon:HG00140_ch_T0001719:15;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1290041	1290092	.	-	1	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=CDS:HG00140_ch_T0001719:14;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1290093	1290652	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=intron:HG00140_ch_T0001719:15;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1290653	1290744	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=exon:HG00140_ch_T0001719:16;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1290653	1290744	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=CDS:HG00140_ch_T0001719:15;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1290745	1291018	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=intron:HG00140_ch_T0001719:16;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1291019	1291165	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=exon:HG00140_ch_T0001719:17;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1291019	1291165	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=CDS:HG00140_ch_T0001719:16;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1291166	1297766	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=intron:HG00140_ch_T0001719:17;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1297767	1297977	.	-	.	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=exon:HG00140_ch_T0001719:18;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1297767	1297769	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=CDS:HG00140_ch_T0001719:17;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	start_codon	1297767	1297769	.	-	0	source_transcript=ENST00000682740.1;source_transcript_name=DAZ4-208;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000682740.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000682740.1;transcript_score=224.7987142857143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001719;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001719;transcript_name=HG00140_ch_T0001719;gene_name=DAZ4;ID=start_codon:HG00140_ch_T0001719;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	1245238	1297979	9910	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=169.47699999999998;frameshift=True;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001720;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_G0000628;transcript_name=HG00140_ch_T0001720;gene_name=DAZ4;ID=HG00140_ch_T0001720;Name=DAZ4
HG00140_chrY_random0000005	CAT	exon	1245238	1247090	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=169.47699999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001720;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001720;transcript_name=HG00140_ch_T0001720;gene_name=DAZ4;ID=exon:HG00140_ch_T0001720:0;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1247091	1251062	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=169.47699999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001720;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001720;transcript_name=HG00140_ch_T0001720;gene_name=DAZ4;ID=intron:HG00140_ch_T0001720:0;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1251063	1251161	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=169.47699999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001720;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001720;transcript_name=HG00140_ch_T0001720;gene_name=DAZ4;ID=exon:HG00140_ch_T0001720:1;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1251098	1251161	.	-	1	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=169.47699999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001720;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001720;transcript_name=HG00140_ch_T0001720;gene_name=DAZ4;ID=CDS:HG00140_ch_T0001720:0;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	stop_codon	1251098	1251100	.	-	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=169.47699999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001720;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001720;transcript_name=HG00140_ch_T0001720;gene_name=DAZ4;ID=stop_codon:HG00140_ch_T0001720;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1251162	1255733	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=169.47699999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001720;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001720;transcript_name=HG00140_ch_T0001720;gene_name=DAZ4;ID=intron:HG00140_ch_T0001720:1;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1255734	1255768	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=169.47699999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001720;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001720;transcript_name=HG00140_ch_T0001720;gene_name=DAZ4;ID=exon:HG00140_ch_T0001720:2;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1255734	1255768	.	-	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=169.47699999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001720;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001720;transcript_name=HG00140_ch_T0001720;gene_name=DAZ4;ID=CDS:HG00140_ch_T0001720:1;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1255769	1256513	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=169.47699999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001720;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001720;transcript_name=HG00140_ch_T0001720;gene_name=DAZ4;ID=intron:HG00140_ch_T0001720:2;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1256514	1256585	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=169.47699999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001720;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001720;transcript_name=HG00140_ch_T0001720;gene_name=DAZ4;ID=exon:HG00140_ch_T0001720:3;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1256514	1256585	.	-	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=169.47699999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001720;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001720;transcript_name=HG00140_ch_T0001720;gene_name=DAZ4;ID=CDS:HG00140_ch_T0001720:2;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1256586	1283006	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=169.47699999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001720;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001720;transcript_name=HG00140_ch_T0001720;gene_name=DAZ4;ID=intron:HG00140_ch_T0001720:3;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1283007	1283078	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=169.47699999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001720;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001720;transcript_name=HG00140_ch_T0001720;gene_name=DAZ4;ID=exon:HG00140_ch_T0001720:4;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1283007	1283078	.	-	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=169.47699999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001720;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001720;transcript_name=HG00140_ch_T0001720;gene_name=DAZ4;ID=CDS:HG00140_ch_T0001720:3;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1283079	1285396	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=169.47699999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001720;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001720;transcript_name=HG00140_ch_T0001720;gene_name=DAZ4;ID=intron:HG00140_ch_T0001720:4;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1285397	1285468	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=169.47699999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001720;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001720;transcript_name=HG00140_ch_T0001720;gene_name=DAZ4;ID=exon:HG00140_ch_T0001720:5;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1285397	1285468	.	-	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=169.47699999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001720;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001720;transcript_name=HG00140_ch_T0001720;gene_name=DAZ4;ID=CDS:HG00140_ch_T0001720:4;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1285469	1287839	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=169.47699999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001720;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001720;transcript_name=HG00140_ch_T0001720;gene_name=DAZ4;ID=intron:HG00140_ch_T0001720:5;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1287840	1287911	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=169.47699999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001720;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001720;transcript_name=HG00140_ch_T0001720;gene_name=DAZ4;ID=exon:HG00140_ch_T0001720:6;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1287840	1287911	.	-	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=169.47699999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001720;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001720;transcript_name=HG00140_ch_T0001720;gene_name=DAZ4;ID=CDS:HG00140_ch_T0001720:5;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1287912	1297766	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=169.47699999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001720;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001720;transcript_name=HG00140_ch_T0001720;gene_name=DAZ4;ID=intron:HG00140_ch_T0001720:6;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1297767	1297979	.	-	.	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=169.47699999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001720;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001720;transcript_name=HG00140_ch_T0001720;gene_name=DAZ4;ID=exon:HG00140_ch_T0001720:7;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1297767	1297769	.	-	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=169.47699999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001720;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001720;transcript_name=HG00140_ch_T0001720;gene_name=DAZ4;ID=CDS:HG00140_ch_T0001720:6;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	start_codon	1297767	1297769	.	-	0	source_transcript=ENST00000449750.7;source_transcript_name=DAZ4-206;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000449750.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000449750.7;transcript_score=169.47699999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001720;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001720;transcript_name=HG00140_ch_T0001720;gene_name=DAZ4;ID=start_codon:HG00140_ch_T0001720;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	1245238	1297979	9930	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;frameshift=True;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001721;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_G0000628;transcript_name=HG00140_ch_T0001721;gene_name=DAZ4;ID=HG00140_ch_T0001721;Name=DAZ4
HG00140_chrY_random0000005	CAT	exon	1245238	1247090	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001721;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001721;transcript_name=HG00140_ch_T0001721;gene_name=DAZ4;ID=exon:HG00140_ch_T0001721:0;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1247091	1251062	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001721;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001721;transcript_name=HG00140_ch_T0001721;gene_name=DAZ4;ID=intron:HG00140_ch_T0001721:0;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1251063	1251161	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001721;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001721;transcript_name=HG00140_ch_T0001721;gene_name=DAZ4;ID=exon:HG00140_ch_T0001721:1;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1251098	1251161	.	-	1	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001721;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001721;transcript_name=HG00140_ch_T0001721;gene_name=DAZ4;ID=CDS:HG00140_ch_T0001721:0;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	stop_codon	1251098	1251100	.	-	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001721;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001721;transcript_name=HG00140_ch_T0001721;gene_name=DAZ4;ID=stop_codon:HG00140_ch_T0001721;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1251162	1255733	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001721;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001721;transcript_name=HG00140_ch_T0001721;gene_name=DAZ4;ID=intron:HG00140_ch_T0001721:1;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1255734	1255768	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001721;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001721;transcript_name=HG00140_ch_T0001721;gene_name=DAZ4;ID=exon:HG00140_ch_T0001721:2;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1255734	1255768	.	-	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001721;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001721;transcript_name=HG00140_ch_T0001721;gene_name=DAZ4;ID=CDS:HG00140_ch_T0001721:1;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1255769	1256513	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001721;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001721;transcript_name=HG00140_ch_T0001721;gene_name=DAZ4;ID=intron:HG00140_ch_T0001721:2;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1256514	1256585	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001721;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001721;transcript_name=HG00140_ch_T0001721;gene_name=DAZ4;ID=exon:HG00140_ch_T0001721:3;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1256514	1256585	.	-	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001721;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001721;transcript_name=HG00140_ch_T0001721;gene_name=DAZ4;ID=CDS:HG00140_ch_T0001721:2;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1256586	1280610	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001721;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001721;transcript_name=HG00140_ch_T0001721;gene_name=DAZ4;ID=intron:HG00140_ch_T0001721:3;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1280611	1280682	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001721;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001721;transcript_name=HG00140_ch_T0001721;gene_name=DAZ4;ID=exon:HG00140_ch_T0001721:4;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1280611	1280682	.	-	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001721;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001721;transcript_name=HG00140_ch_T0001721;gene_name=DAZ4;ID=CDS:HG00140_ch_T0001721:3;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1280683	1283006	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001721;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001721;transcript_name=HG00140_ch_T0001721;gene_name=DAZ4;ID=intron:HG00140_ch_T0001721:4;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1283007	1283078	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001721;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001721;transcript_name=HG00140_ch_T0001721;gene_name=DAZ4;ID=exon:HG00140_ch_T0001721:5;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1283007	1283078	.	-	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001721;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001721;transcript_name=HG00140_ch_T0001721;gene_name=DAZ4;ID=CDS:HG00140_ch_T0001721:4;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1283079	1285396	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001721;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001721;transcript_name=HG00140_ch_T0001721;gene_name=DAZ4;ID=intron:HG00140_ch_T0001721:5;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1285397	1285468	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001721;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001721;transcript_name=HG00140_ch_T0001721;gene_name=DAZ4;ID=exon:HG00140_ch_T0001721:6;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1285397	1285468	.	-	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001721;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001721;transcript_name=HG00140_ch_T0001721;gene_name=DAZ4;ID=CDS:HG00140_ch_T0001721:5;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1285469	1287839	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001721;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001721;transcript_name=HG00140_ch_T0001721;gene_name=DAZ4;ID=intron:HG00140_ch_T0001721:6;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1287840	1287911	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001721;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001721;transcript_name=HG00140_ch_T0001721;gene_name=DAZ4;ID=exon:HG00140_ch_T0001721:7;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1287840	1287911	.	-	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001721;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001721;transcript_name=HG00140_ch_T0001721;gene_name=DAZ4;ID=CDS:HG00140_ch_T0001721:6;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1287912	1289311	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001721;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001721;transcript_name=HG00140_ch_T0001721;gene_name=DAZ4;ID=intron:HG00140_ch_T0001721:7;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1289312	1289451	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001721;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001721;transcript_name=HG00140_ch_T0001721;gene_name=DAZ4;ID=exon:HG00140_ch_T0001721:8;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1289312	1289451	.	-	2	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001721;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001721;transcript_name=HG00140_ch_T0001721;gene_name=DAZ4;ID=CDS:HG00140_ch_T0001721:7;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1289452	1289540	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001721;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001721;transcript_name=HG00140_ch_T0001721;gene_name=DAZ4;ID=intron:HG00140_ch_T0001721:8;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1289541	1289604	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001721;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001721;transcript_name=HG00140_ch_T0001721;gene_name=DAZ4;ID=exon:HG00140_ch_T0001721:9;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1289541	1289604	.	-	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001721;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001721;transcript_name=HG00140_ch_T0001721;gene_name=DAZ4;ID=CDS:HG00140_ch_T0001721:8;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1289605	1290040	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001721;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001721;transcript_name=HG00140_ch_T0001721;gene_name=DAZ4;ID=intron:HG00140_ch_T0001721:9;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1290041	1290092	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001721;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001721;transcript_name=HG00140_ch_T0001721;gene_name=DAZ4;ID=exon:HG00140_ch_T0001721:10;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1290041	1290092	.	-	1	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001721;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001721;transcript_name=HG00140_ch_T0001721;gene_name=DAZ4;ID=CDS:HG00140_ch_T0001721:9;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1290093	1290652	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001721;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001721;transcript_name=HG00140_ch_T0001721;gene_name=DAZ4;ID=intron:HG00140_ch_T0001721:10;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1290653	1290744	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001721;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001721;transcript_name=HG00140_ch_T0001721;gene_name=DAZ4;ID=exon:HG00140_ch_T0001721:11;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1290653	1290744	.	-	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001721;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001721;transcript_name=HG00140_ch_T0001721;gene_name=DAZ4;ID=CDS:HG00140_ch_T0001721:10;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1290745	1291018	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001721;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001721;transcript_name=HG00140_ch_T0001721;gene_name=DAZ4;ID=intron:HG00140_ch_T0001721:11;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1291019	1291165	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001721;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001721;transcript_name=HG00140_ch_T0001721;gene_name=DAZ4;ID=exon:HG00140_ch_T0001721:12;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1291019	1291165	.	-	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001721;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001721;transcript_name=HG00140_ch_T0001721;gene_name=DAZ4;ID=CDS:HG00140_ch_T0001721:11;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1291166	1297766	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001721;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001721;transcript_name=HG00140_ch_T0001721;gene_name=DAZ4;ID=intron:HG00140_ch_T0001721:12;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1297767	1297979	.	-	.	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001721;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001721;transcript_name=HG00140_ch_T0001721;gene_name=DAZ4;ID=exon:HG00140_ch_T0001721:13;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1297767	1297769	.	-	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001721;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001721;transcript_name=HG00140_ch_T0001721;gene_name=DAZ4;ID=CDS:HG00140_ch_T0001721:12;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	start_codon	1297767	1297769	.	-	0	source_transcript=ENST00000382314.6;source_transcript_name=DAZ4-202;source_gene=ENSG00000205916.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000205916.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382314.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000382314.6;transcript_score=209.17673913043478;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG00140_ch_T0001721;gene_id=HG00140_ch_G0000628;Parent=HG00140_ch_T0001721;transcript_name=HG00140_ch_T0001721;gene_name=DAZ4;ID=start_codon:HG00140_ch_T0001721;Name=DAZ4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	1318405	1379675	.	+	.	source_gene_common_name=DAZ3;source_gene=ENSG00000187191.16;gene_id=HG00140_ch_G0000629;gene_biotype=protein_coding;gene_name=DAZ3;gene_sources=liftoff,transMap;ID=HG00140_ch_G0000629;Name=DAZ3
HG00140_chrY_random0000005	CAT	transcript	1318405	1379675	10000	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_G0000629;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=HG00140_ch_T0001722;Name=DAZ3
HG00140_chrY_random0000005	CAT	exon	1318405	1318714	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001722;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=exon:HG00140_ch_T0001722:0;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1318712	1318714	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001722;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001722:0;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	start_codon	1318712	1318714	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001722;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=start_codon:HG00140_ch_T0001722;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1318715	1325315	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001722;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=intron:HG00140_ch_T0001722:0;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1325316	1325462	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001722;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=exon:HG00140_ch_T0001722:1;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1325316	1325462	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001722;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001722:1;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1325463	1336585	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001722;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=intron:HG00140_ch_T0001722:1;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1336586	1336677	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001722;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=exon:HG00140_ch_T0001722:2;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1336586	1336677	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001722;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001722:2;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1336678	1337237	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001722;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=intron:HG00140_ch_T0001722:2;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1337238	1337289	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001722;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=exon:HG00140_ch_T0001722:3;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1337238	1337289	.	+	1	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001722;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001722:3;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1337290	1337725	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001722;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=intron:HG00140_ch_T0001722:3;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1337726	1337789	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001722;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=exon:HG00140_ch_T0001722:4;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1337726	1337789	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001722;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001722:4;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1337790	1337878	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001722;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=intron:HG00140_ch_T0001722:4;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1337879	1338018	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001722;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=exon:HG00140_ch_T0001722:5;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1337879	1338018	.	+	2	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001722;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001722:5;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1338019	1339418	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001722;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=intron:HG00140_ch_T0001722:5;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1339419	1339490	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001722;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=exon:HG00140_ch_T0001722:6;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1339419	1339490	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001722;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001722:6;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1339491	1341861	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001722;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=intron:HG00140_ch_T0001722:6;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1341862	1341933	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001722;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=exon:HG00140_ch_T0001722:7;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1341862	1341933	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001722;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001722:7;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1341934	1344251	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001722;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=intron:HG00140_ch_T0001722:7;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1344252	1344323	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001722;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=exon:HG00140_ch_T0001722:8;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1344252	1344323	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001722;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001722:8;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1344324	1346647	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001722;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=intron:HG00140_ch_T0001722:8;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1346648	1346719	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001722;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=exon:HG00140_ch_T0001722:9;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1346648	1346719	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001722;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001722:9;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1346720	1349024	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001722;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=intron:HG00140_ch_T0001722:9;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1349025	1349096	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001722;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=exon:HG00140_ch_T0001722:10;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1349025	1349096	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001722;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001722:10;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1349097	1351404	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001722;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=intron:HG00140_ch_T0001722:10;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1351405	1351476	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001722;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=exon:HG00140_ch_T0001722:11;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1351405	1351476	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001722;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001722:11;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1351477	1353781	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001722;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=intron:HG00140_ch_T0001722:11;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1353782	1353853	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001722;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=exon:HG00140_ch_T0001722:12;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1353782	1353853	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001722;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001722:12;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1353854	1368325	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001722;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=intron:HG00140_ch_T0001722:12;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1368326	1368397	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001722;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=exon:HG00140_ch_T0001722:13;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1368326	1368397	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001722;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001722:13;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1368398	1369142	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001722;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=intron:HG00140_ch_T0001722:13;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1369143	1369177	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001722;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=exon:HG00140_ch_T0001722:14;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1369143	1369177	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001722;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001722:14;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1369178	1373749	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001722;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=intron:HG00140_ch_T0001722:14;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1373750	1373848	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001722;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=exon:HG00140_ch_T0001722:15;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1373750	1373813	.	+	1	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001722;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001722:15;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	stop_codon	1373811	1373813	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001722;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=stop_codon:HG00140_ch_T0001722;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1373849	1377818	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001722;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=intron:HG00140_ch_T0001722:15;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1377819	1379675	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=transMap;normalized_transcript_id=ENST00000446723.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001722;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001722;transcript_name=HG00140_ch_T0001722;gene_name=DAZ3;ID=exon:HG00140_ch_T0001722:16;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	1318405	1379675	100	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_G0000629;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=HG00140_ch_T0001723;Name=DAZ3
HG00140_chrY_random0000005	CAT	exon	1318405	1318714	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001723;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=exon:HG00140_ch_T0001723:0;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1318712	1318714	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001723;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001723:0;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	start_codon	1318712	1318714	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001723;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=start_codon:HG00140_ch_T0001723;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1318715	1336164	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001723;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=intron:HG00140_ch_T0001723:0;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1336165	1336311	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001723;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=exon:HG00140_ch_T0001723:1;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1336165	1336311	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001723;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001723:1;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1336312	1336585	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001723;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=intron:HG00140_ch_T0001723:1;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1336586	1336677	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001723;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=exon:HG00140_ch_T0001723:2;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1336586	1336677	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001723;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001723:2;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1336678	1337237	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001723;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=intron:HG00140_ch_T0001723:2;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1337238	1337289	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001723;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=exon:HG00140_ch_T0001723:3;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1337238	1337289	.	+	1	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001723;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001723:3;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1337290	1337725	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001723;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=intron:HG00140_ch_T0001723:3;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1337726	1337789	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001723;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=exon:HG00140_ch_T0001723:4;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1337726	1337789	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001723;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001723:4;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1337790	1337878	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001723;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=intron:HG00140_ch_T0001723:4;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1337879	1338018	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001723;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=exon:HG00140_ch_T0001723:5;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1337879	1338018	.	+	2	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001723;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001723:5;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1338019	1339418	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001723;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=intron:HG00140_ch_T0001723:5;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1339419	1339490	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001723;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=exon:HG00140_ch_T0001723:6;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1339419	1339490	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001723;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001723:6;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1339491	1341861	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001723;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=intron:HG00140_ch_T0001723:6;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1341862	1341933	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001723;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=exon:HG00140_ch_T0001723:7;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1341862	1341933	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001723;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001723:7;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1341934	1344251	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001723;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=intron:HG00140_ch_T0001723:7;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1344252	1344323	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001723;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=exon:HG00140_ch_T0001723:8;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1344252	1344323	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001723;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001723:8;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1344324	1346647	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001723;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=intron:HG00140_ch_T0001723:8;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1346648	1346719	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001723;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=exon:HG00140_ch_T0001723:9;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1346648	1346719	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001723;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001723:9;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1346720	1349024	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001723;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=intron:HG00140_ch_T0001723:9;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1349025	1349096	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001723;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=exon:HG00140_ch_T0001723:10;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1349025	1349096	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001723;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001723:10;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1349097	1351404	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001723;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=intron:HG00140_ch_T0001723:10;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1351405	1351476	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001723;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=exon:HG00140_ch_T0001723:11;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1351405	1351476	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001723;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001723:11;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1351477	1353781	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001723;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=intron:HG00140_ch_T0001723:11;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1353782	1353853	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001723;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=exon:HG00140_ch_T0001723:12;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1353782	1353853	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001723;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001723:12;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1353854	1368325	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001723;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=intron:HG00140_ch_T0001723:12;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1368326	1368397	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001723;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=exon:HG00140_ch_T0001723:13;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1368326	1368397	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001723;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001723:13;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1368398	1369142	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001723;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=intron:HG00140_ch_T0001723:13;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1369143	1369177	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001723;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=exon:HG00140_ch_T0001723:14;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1369143	1369177	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001723;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001723:14;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1369178	1373749	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001723;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=intron:HG00140_ch_T0001723:14;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1373750	1373848	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001723;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=exon:HG00140_ch_T0001723:15;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1373750	1373813	.	+	1	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001723;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001723:15;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	stop_codon	1373811	1373813	.	+	0	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001723;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=stop_codon:HG00140_ch_T0001723;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1373849	1377818	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001723;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=intron:HG00140_ch_T0001723:15;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1377819	1379675	.	+	.	source_transcript=ENST00000446723.4;source_transcript_name=DAZ3-203;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000446723.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000446723.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001723;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001723;transcript_name=HG00140_ch_T0001723;gene_name=DAZ3;ID=exon:HG00140_ch_T0001723:16;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	1318428	1379675	10000	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=transMap;normalized_transcript_id=ENST00000315357.9;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001724;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_G0000629;transcript_name=HG00140_ch_T0001724;gene_name=DAZ3;ID=HG00140_ch_T0001724;Name=DAZ3
HG00140_chrY_random0000005	CAT	exon	1318428	1318714	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=transMap;normalized_transcript_id=ENST00000315357.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001724;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001724;transcript_name=HG00140_ch_T0001724;gene_name=DAZ3;ID=exon:HG00140_ch_T0001724:0;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1318712	1318714	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=transMap;normalized_transcript_id=ENST00000315357.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001724;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001724;transcript_name=HG00140_ch_T0001724;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001724:0;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	start_codon	1318712	1318714	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=transMap;normalized_transcript_id=ENST00000315357.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001724;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001724;transcript_name=HG00140_ch_T0001724;gene_name=DAZ3;ID=start_codon:HG00140_ch_T0001724;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1318715	1325315	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=transMap;normalized_transcript_id=ENST00000315357.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001724;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001724;transcript_name=HG00140_ch_T0001724;gene_name=DAZ3;ID=intron:HG00140_ch_T0001724:0;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1325316	1325462	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=transMap;normalized_transcript_id=ENST00000315357.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001724;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001724;transcript_name=HG00140_ch_T0001724;gene_name=DAZ3;ID=exon:HG00140_ch_T0001724:1;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1325316	1325462	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=transMap;normalized_transcript_id=ENST00000315357.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001724;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001724;transcript_name=HG00140_ch_T0001724;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001724:1;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1325463	1336585	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=transMap;normalized_transcript_id=ENST00000315357.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001724;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001724;transcript_name=HG00140_ch_T0001724;gene_name=DAZ3;ID=intron:HG00140_ch_T0001724:1;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1336586	1336677	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=transMap;normalized_transcript_id=ENST00000315357.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001724;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001724;transcript_name=HG00140_ch_T0001724;gene_name=DAZ3;ID=exon:HG00140_ch_T0001724:2;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1336586	1336677	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=transMap;normalized_transcript_id=ENST00000315357.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001724;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001724;transcript_name=HG00140_ch_T0001724;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001724:2;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1336678	1337237	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=transMap;normalized_transcript_id=ENST00000315357.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001724;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001724;transcript_name=HG00140_ch_T0001724;gene_name=DAZ3;ID=intron:HG00140_ch_T0001724:2;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1337238	1337289	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=transMap;normalized_transcript_id=ENST00000315357.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001724;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001724;transcript_name=HG00140_ch_T0001724;gene_name=DAZ3;ID=exon:HG00140_ch_T0001724:3;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1337238	1337289	.	+	1	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=transMap;normalized_transcript_id=ENST00000315357.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001724;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001724;transcript_name=HG00140_ch_T0001724;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001724:3;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1337290	1337725	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=transMap;normalized_transcript_id=ENST00000315357.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001724;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001724;transcript_name=HG00140_ch_T0001724;gene_name=DAZ3;ID=intron:HG00140_ch_T0001724:3;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1337726	1337789	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=transMap;normalized_transcript_id=ENST00000315357.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001724;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001724;transcript_name=HG00140_ch_T0001724;gene_name=DAZ3;ID=exon:HG00140_ch_T0001724:4;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1337726	1337789	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=transMap;normalized_transcript_id=ENST00000315357.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001724;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001724;transcript_name=HG00140_ch_T0001724;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001724:4;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1337790	1337878	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=transMap;normalized_transcript_id=ENST00000315357.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001724;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001724;transcript_name=HG00140_ch_T0001724;gene_name=DAZ3;ID=intron:HG00140_ch_T0001724:4;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1337879	1338018	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=transMap;normalized_transcript_id=ENST00000315357.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001724;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001724;transcript_name=HG00140_ch_T0001724;gene_name=DAZ3;ID=exon:HG00140_ch_T0001724:5;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1337879	1338018	.	+	2	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=transMap;normalized_transcript_id=ENST00000315357.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001724;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001724;transcript_name=HG00140_ch_T0001724;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001724:5;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1338019	1339418	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=transMap;normalized_transcript_id=ENST00000315357.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001724;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001724;transcript_name=HG00140_ch_T0001724;gene_name=DAZ3;ID=intron:HG00140_ch_T0001724:5;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1339419	1339490	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=transMap;normalized_transcript_id=ENST00000315357.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001724;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001724;transcript_name=HG00140_ch_T0001724;gene_name=DAZ3;ID=exon:HG00140_ch_T0001724:6;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1339419	1339490	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=transMap;normalized_transcript_id=ENST00000315357.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001724;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001724;transcript_name=HG00140_ch_T0001724;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001724:6;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1339491	1341861	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=transMap;normalized_transcript_id=ENST00000315357.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001724;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001724;transcript_name=HG00140_ch_T0001724;gene_name=DAZ3;ID=intron:HG00140_ch_T0001724:6;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1341862	1341933	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=transMap;normalized_transcript_id=ENST00000315357.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001724;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001724;transcript_name=HG00140_ch_T0001724;gene_name=DAZ3;ID=exon:HG00140_ch_T0001724:7;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1341862	1341933	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=transMap;normalized_transcript_id=ENST00000315357.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001724;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001724;transcript_name=HG00140_ch_T0001724;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001724:7;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1341934	1344251	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=transMap;normalized_transcript_id=ENST00000315357.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001724;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001724;transcript_name=HG00140_ch_T0001724;gene_name=DAZ3;ID=intron:HG00140_ch_T0001724:7;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1344252	1344323	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=transMap;normalized_transcript_id=ENST00000315357.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001724;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001724;transcript_name=HG00140_ch_T0001724;gene_name=DAZ3;ID=exon:HG00140_ch_T0001724:8;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1344252	1344323	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=transMap;normalized_transcript_id=ENST00000315357.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001724;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001724;transcript_name=HG00140_ch_T0001724;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001724:8;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1344324	1349024	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=transMap;normalized_transcript_id=ENST00000315357.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001724;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001724;transcript_name=HG00140_ch_T0001724;gene_name=DAZ3;ID=intron:HG00140_ch_T0001724:8;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1349025	1349096	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=transMap;normalized_transcript_id=ENST00000315357.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001724;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001724;transcript_name=HG00140_ch_T0001724;gene_name=DAZ3;ID=exon:HG00140_ch_T0001724:9;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1349025	1349096	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=transMap;normalized_transcript_id=ENST00000315357.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001724;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001724;transcript_name=HG00140_ch_T0001724;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001724:9;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1349097	1353781	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=transMap;normalized_transcript_id=ENST00000315357.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001724;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001724;transcript_name=HG00140_ch_T0001724;gene_name=DAZ3;ID=intron:HG00140_ch_T0001724:9;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1353782	1353853	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=transMap;normalized_transcript_id=ENST00000315357.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001724;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001724;transcript_name=HG00140_ch_T0001724;gene_name=DAZ3;ID=exon:HG00140_ch_T0001724:10;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1353782	1353853	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=transMap;normalized_transcript_id=ENST00000315357.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001724;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001724;transcript_name=HG00140_ch_T0001724;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001724:10;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1353854	1358538	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=transMap;normalized_transcript_id=ENST00000315357.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001724;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001724;transcript_name=HG00140_ch_T0001724;gene_name=DAZ3;ID=intron:HG00140_ch_T0001724:10;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1358539	1358610	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=transMap;normalized_transcript_id=ENST00000315357.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001724;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001724;transcript_name=HG00140_ch_T0001724;gene_name=DAZ3;ID=exon:HG00140_ch_T0001724:11;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1358539	1358610	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=transMap;normalized_transcript_id=ENST00000315357.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001724;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001724;transcript_name=HG00140_ch_T0001724;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001724:11;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1358611	1368325	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=transMap;normalized_transcript_id=ENST00000315357.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001724;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001724;transcript_name=HG00140_ch_T0001724;gene_name=DAZ3;ID=intron:HG00140_ch_T0001724:11;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1368326	1368397	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=transMap;normalized_transcript_id=ENST00000315357.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001724;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001724;transcript_name=HG00140_ch_T0001724;gene_name=DAZ3;ID=exon:HG00140_ch_T0001724:12;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1368326	1368397	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=transMap;normalized_transcript_id=ENST00000315357.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001724;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001724;transcript_name=HG00140_ch_T0001724;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001724:12;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1368398	1369142	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=transMap;normalized_transcript_id=ENST00000315357.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001724;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001724;transcript_name=HG00140_ch_T0001724;gene_name=DAZ3;ID=intron:HG00140_ch_T0001724:12;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1369143	1369177	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=transMap;normalized_transcript_id=ENST00000315357.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001724;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001724;transcript_name=HG00140_ch_T0001724;gene_name=DAZ3;ID=exon:HG00140_ch_T0001724:13;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1369143	1369177	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=transMap;normalized_transcript_id=ENST00000315357.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001724;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001724;transcript_name=HG00140_ch_T0001724;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001724:13;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1369178	1373749	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=transMap;normalized_transcript_id=ENST00000315357.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001724;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001724;transcript_name=HG00140_ch_T0001724;gene_name=DAZ3;ID=intron:HG00140_ch_T0001724:13;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1373750	1373848	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=transMap;normalized_transcript_id=ENST00000315357.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001724;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001724;transcript_name=HG00140_ch_T0001724;gene_name=DAZ3;ID=exon:HG00140_ch_T0001724:14;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1373750	1373813	.	+	1	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=transMap;normalized_transcript_id=ENST00000315357.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001724;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001724;transcript_name=HG00140_ch_T0001724;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001724:14;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	stop_codon	1373811	1373813	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=transMap;normalized_transcript_id=ENST00000315357.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001724;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001724;transcript_name=HG00140_ch_T0001724;gene_name=DAZ3;ID=stop_codon:HG00140_ch_T0001724;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1373849	1377818	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=transMap;normalized_transcript_id=ENST00000315357.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001724;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001724;transcript_name=HG00140_ch_T0001724;gene_name=DAZ3;ID=intron:HG00140_ch_T0001724:14;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1377819	1379675	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=transMap;normalized_transcript_id=ENST00000315357.9;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001724;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001724;transcript_name=HG00140_ch_T0001724;gene_name=DAZ3;ID=exon:HG00140_ch_T0001724:15;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	1318428	1379675	100	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001725;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_G0000629;transcript_name=HG00140_ch_T0001725;gene_name=DAZ3;ID=HG00140_ch_T0001725;Name=DAZ3
HG00140_chrY_random0000005	CAT	exon	1318428	1318714	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001725;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001725;transcript_name=HG00140_ch_T0001725;gene_name=DAZ3;ID=exon:HG00140_ch_T0001725:0;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1318712	1318714	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001725;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001725;transcript_name=HG00140_ch_T0001725;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001725:0;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	start_codon	1318712	1318714	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001725;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001725;transcript_name=HG00140_ch_T0001725;gene_name=DAZ3;ID=start_codon:HG00140_ch_T0001725;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1318715	1336164	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001725;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001725;transcript_name=HG00140_ch_T0001725;gene_name=DAZ3;ID=intron:HG00140_ch_T0001725:0;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1336165	1336311	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001725;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001725;transcript_name=HG00140_ch_T0001725;gene_name=DAZ3;ID=exon:HG00140_ch_T0001725:1;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1336165	1336311	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001725;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001725;transcript_name=HG00140_ch_T0001725;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001725:1;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1336312	1336585	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001725;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001725;transcript_name=HG00140_ch_T0001725;gene_name=DAZ3;ID=intron:HG00140_ch_T0001725:1;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1336586	1336677	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001725;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001725;transcript_name=HG00140_ch_T0001725;gene_name=DAZ3;ID=exon:HG00140_ch_T0001725:2;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1336586	1336677	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001725;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001725;transcript_name=HG00140_ch_T0001725;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001725:2;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1336678	1337237	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001725;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001725;transcript_name=HG00140_ch_T0001725;gene_name=DAZ3;ID=intron:HG00140_ch_T0001725:2;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1337238	1337289	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001725;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001725;transcript_name=HG00140_ch_T0001725;gene_name=DAZ3;ID=exon:HG00140_ch_T0001725:3;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1337238	1337289	.	+	1	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001725;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001725;transcript_name=HG00140_ch_T0001725;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001725:3;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1337290	1337725	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001725;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001725;transcript_name=HG00140_ch_T0001725;gene_name=DAZ3;ID=intron:HG00140_ch_T0001725:3;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1337726	1337789	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001725;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001725;transcript_name=HG00140_ch_T0001725;gene_name=DAZ3;ID=exon:HG00140_ch_T0001725:4;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1337726	1337789	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001725;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001725;transcript_name=HG00140_ch_T0001725;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001725:4;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1337790	1337878	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001725;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001725;transcript_name=HG00140_ch_T0001725;gene_name=DAZ3;ID=intron:HG00140_ch_T0001725:4;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1337879	1338018	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001725;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001725;transcript_name=HG00140_ch_T0001725;gene_name=DAZ3;ID=exon:HG00140_ch_T0001725:5;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1337879	1338018	.	+	2	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001725;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001725;transcript_name=HG00140_ch_T0001725;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001725:5;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1338019	1339418	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001725;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001725;transcript_name=HG00140_ch_T0001725;gene_name=DAZ3;ID=intron:HG00140_ch_T0001725:5;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1339419	1339490	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001725;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001725;transcript_name=HG00140_ch_T0001725;gene_name=DAZ3;ID=exon:HG00140_ch_T0001725:6;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1339419	1339490	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001725;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001725;transcript_name=HG00140_ch_T0001725;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001725:6;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1339491	1341861	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001725;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001725;transcript_name=HG00140_ch_T0001725;gene_name=DAZ3;ID=intron:HG00140_ch_T0001725:6;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1341862	1341933	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001725;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001725;transcript_name=HG00140_ch_T0001725;gene_name=DAZ3;ID=exon:HG00140_ch_T0001725:7;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1341862	1341933	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001725;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001725;transcript_name=HG00140_ch_T0001725;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001725:7;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1341934	1344251	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001725;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001725;transcript_name=HG00140_ch_T0001725;gene_name=DAZ3;ID=intron:HG00140_ch_T0001725:7;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1344252	1344323	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001725;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001725;transcript_name=HG00140_ch_T0001725;gene_name=DAZ3;ID=exon:HG00140_ch_T0001725:8;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1344252	1344323	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001725;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001725;transcript_name=HG00140_ch_T0001725;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001725:8;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1344324	1349024	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001725;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001725;transcript_name=HG00140_ch_T0001725;gene_name=DAZ3;ID=intron:HG00140_ch_T0001725:8;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1349025	1349096	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001725;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001725;transcript_name=HG00140_ch_T0001725;gene_name=DAZ3;ID=exon:HG00140_ch_T0001725:9;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1349025	1349096	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001725;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001725;transcript_name=HG00140_ch_T0001725;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001725:9;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1349097	1353781	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001725;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001725;transcript_name=HG00140_ch_T0001725;gene_name=DAZ3;ID=intron:HG00140_ch_T0001725:9;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1353782	1353853	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001725;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001725;transcript_name=HG00140_ch_T0001725;gene_name=DAZ3;ID=exon:HG00140_ch_T0001725:10;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1353782	1353853	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001725;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001725;transcript_name=HG00140_ch_T0001725;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001725:10;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1353854	1358538	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001725;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001725;transcript_name=HG00140_ch_T0001725;gene_name=DAZ3;ID=intron:HG00140_ch_T0001725:10;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1358539	1358610	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001725;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001725;transcript_name=HG00140_ch_T0001725;gene_name=DAZ3;ID=exon:HG00140_ch_T0001725:11;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1358539	1358610	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001725;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001725;transcript_name=HG00140_ch_T0001725;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001725:11;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1358611	1368325	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001725;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001725;transcript_name=HG00140_ch_T0001725;gene_name=DAZ3;ID=intron:HG00140_ch_T0001725:11;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1368326	1368397	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001725;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001725;transcript_name=HG00140_ch_T0001725;gene_name=DAZ3;ID=exon:HG00140_ch_T0001725:12;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1368326	1368397	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001725;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001725;transcript_name=HG00140_ch_T0001725;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001725:12;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1368398	1369142	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001725;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001725;transcript_name=HG00140_ch_T0001725;gene_name=DAZ3;ID=intron:HG00140_ch_T0001725:12;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1369143	1369177	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001725;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001725;transcript_name=HG00140_ch_T0001725;gene_name=DAZ3;ID=exon:HG00140_ch_T0001725:13;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1369143	1369177	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001725;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001725;transcript_name=HG00140_ch_T0001725;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001725:13;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1369178	1373749	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001725;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001725;transcript_name=HG00140_ch_T0001725;gene_name=DAZ3;ID=intron:HG00140_ch_T0001725:13;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1373750	1373848	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001725;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001725;transcript_name=HG00140_ch_T0001725;gene_name=DAZ3;ID=exon:HG00140_ch_T0001725:14;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1373750	1373813	.	+	1	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001725;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001725;transcript_name=HG00140_ch_T0001725;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001725:14;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	stop_codon	1373811	1373813	.	+	0	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001725;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001725;transcript_name=HG00140_ch_T0001725;gene_name=DAZ3;ID=stop_codon:HG00140_ch_T0001725;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1373849	1377818	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001725;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001725;transcript_name=HG00140_ch_T0001725;gene_name=DAZ3;ID=intron:HG00140_ch_T0001725:14;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1377819	1379675	.	+	.	source_transcript=ENST00000315357.9;source_transcript_name=DAZ3-201;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000315357.9;alignment_mode=liftoff;normalized_transcript_id=ENST00000315357.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001725;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001725;transcript_name=HG00140_ch_T0001725;gene_name=DAZ3;ID=exon:HG00140_ch_T0001725:15;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	1318504	1379675	10000	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_G0000629;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=HG00140_ch_T0001726;Name=DAZ3
HG00140_chrY_random0000005	CAT	exon	1318504	1318714	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=exon:HG00140_ch_T0001726:0;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1318712	1318714	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001726:0;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	start_codon	1318712	1318714	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=start_codon:HG00140_ch_T0001726;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1318715	1325315	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=intron:HG00140_ch_T0001726:0;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1325316	1325462	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=exon:HG00140_ch_T0001726:1;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1325316	1325462	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001726:1;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1325463	1336585	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=intron:HG00140_ch_T0001726:1;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1336586	1336677	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=exon:HG00140_ch_T0001726:2;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1336586	1336677	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001726:2;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1336678	1337237	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=intron:HG00140_ch_T0001726:2;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1337238	1337289	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=exon:HG00140_ch_T0001726:3;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1337238	1337289	.	+	1	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001726:3;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1337290	1337725	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=intron:HG00140_ch_T0001726:3;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1337726	1337789	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=exon:HG00140_ch_T0001726:4;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1337726	1337789	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001726:4;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1337790	1337878	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=intron:HG00140_ch_T0001726:4;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1337879	1338018	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=exon:HG00140_ch_T0001726:5;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1337879	1338018	.	+	2	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001726:5;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1338019	1339418	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=intron:HG00140_ch_T0001726:5;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1339419	1339490	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=exon:HG00140_ch_T0001726:6;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1339419	1339490	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001726:6;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1339491	1341861	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=intron:HG00140_ch_T0001726:6;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1341862	1341933	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=exon:HG00140_ch_T0001726:7;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1341862	1341933	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001726:7;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1341934	1344251	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=intron:HG00140_ch_T0001726:7;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1344252	1344323	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=exon:HG00140_ch_T0001726:8;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1344252	1344323	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001726:8;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1344324	1346647	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=intron:HG00140_ch_T0001726:8;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1346648	1346719	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=exon:HG00140_ch_T0001726:9;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1346648	1346719	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001726:9;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1346720	1349024	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=intron:HG00140_ch_T0001726:9;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1349025	1349096	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=exon:HG00140_ch_T0001726:10;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1349025	1349096	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001726:10;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1349097	1351404	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=intron:HG00140_ch_T0001726:10;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1351405	1351476	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=exon:HG00140_ch_T0001726:11;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1351405	1351476	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001726:11;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1351477	1353781	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=intron:HG00140_ch_T0001726:11;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1353782	1353853	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=exon:HG00140_ch_T0001726:12;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1353782	1353853	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001726:12;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1353854	1356161	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=intron:HG00140_ch_T0001726:12;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1356162	1356233	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=exon:HG00140_ch_T0001726:13;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1356162	1356233	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001726:13;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1356234	1358538	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=intron:HG00140_ch_T0001726:13;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1358539	1358610	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=exon:HG00140_ch_T0001726:14;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1358539	1358610	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001726:14;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1358611	1368325	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=intron:HG00140_ch_T0001726:14;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1368326	1368397	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=exon:HG00140_ch_T0001726:15;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1368326	1368397	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001726:15;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1368398	1369142	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=intron:HG00140_ch_T0001726:15;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1369143	1369177	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=exon:HG00140_ch_T0001726:16;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1369143	1369177	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001726:16;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1369178	1373749	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=intron:HG00140_ch_T0001726:16;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1373750	1373848	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=exon:HG00140_ch_T0001726:17;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1373750	1373813	.	+	1	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001726:17;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	stop_codon	1373811	1373813	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=stop_codon:HG00140_ch_T0001726;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1373849	1377818	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=intron:HG00140_ch_T0001726:17;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1377819	1379675	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=transMap;normalized_transcript_id=ENST00000382365.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001726;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001726;transcript_name=HG00140_ch_T0001726;gene_name=DAZ3;ID=exon:HG00140_ch_T0001726:18;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	1318504	1379675	100	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_G0000629;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=HG00140_ch_T0001727;Name=DAZ3
HG00140_chrY_random0000005	CAT	exon	1318504	1318714	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=exon:HG00140_ch_T0001727:0;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1318712	1318714	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001727:0;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	start_codon	1318712	1318714	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=start_codon:HG00140_ch_T0001727;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1318715	1336164	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=intron:HG00140_ch_T0001727:0;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1336165	1336311	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=exon:HG00140_ch_T0001727:1;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1336165	1336311	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001727:1;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1336312	1336585	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=intron:HG00140_ch_T0001727:1;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1336586	1336677	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=exon:HG00140_ch_T0001727:2;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1336586	1336677	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001727:2;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1336678	1337237	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=intron:HG00140_ch_T0001727:2;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1337238	1337289	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=exon:HG00140_ch_T0001727:3;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1337238	1337289	.	+	1	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001727:3;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1337290	1337725	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=intron:HG00140_ch_T0001727:3;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1337726	1337789	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=exon:HG00140_ch_T0001727:4;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1337726	1337789	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001727:4;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1337790	1337878	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=intron:HG00140_ch_T0001727:4;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1337879	1338018	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=exon:HG00140_ch_T0001727:5;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1337879	1338018	.	+	2	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001727:5;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1338019	1339418	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=intron:HG00140_ch_T0001727:5;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1339419	1339490	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=exon:HG00140_ch_T0001727:6;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1339419	1339490	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001727:6;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1339491	1341861	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=intron:HG00140_ch_T0001727:6;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1341862	1341933	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=exon:HG00140_ch_T0001727:7;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1341862	1341933	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001727:7;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1341934	1344251	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=intron:HG00140_ch_T0001727:7;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1344252	1344323	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=exon:HG00140_ch_T0001727:8;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1344252	1344323	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001727:8;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1344324	1346647	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=intron:HG00140_ch_T0001727:8;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1346648	1346719	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=exon:HG00140_ch_T0001727:9;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1346648	1346719	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001727:9;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1346720	1349024	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=intron:HG00140_ch_T0001727:9;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1349025	1349096	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=exon:HG00140_ch_T0001727:10;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1349025	1349096	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001727:10;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1349097	1351404	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=intron:HG00140_ch_T0001727:10;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1351405	1351476	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=exon:HG00140_ch_T0001727:11;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1351405	1351476	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001727:11;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1351477	1353781	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=intron:HG00140_ch_T0001727:11;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1353782	1353853	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=exon:HG00140_ch_T0001727:12;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1353782	1353853	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001727:12;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1353854	1356161	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=intron:HG00140_ch_T0001727:12;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1356162	1356233	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=exon:HG00140_ch_T0001727:13;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1356162	1356233	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001727:13;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1356234	1358538	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=intron:HG00140_ch_T0001727:13;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1358539	1358610	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=exon:HG00140_ch_T0001727:14;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1358539	1358610	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001727:14;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1358611	1368325	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=intron:HG00140_ch_T0001727:14;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1368326	1368397	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=exon:HG00140_ch_T0001727:15;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1368326	1368397	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001727:15;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1368398	1369142	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=intron:HG00140_ch_T0001727:15;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1369143	1369177	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=exon:HG00140_ch_T0001727:16;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1369143	1369177	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001727:16;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1369178	1373749	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=intron:HG00140_ch_T0001727:16;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1373750	1373848	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=exon:HG00140_ch_T0001727:17;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1373750	1373813	.	+	1	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=CDS:HG00140_ch_T0001727:17;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	stop_codon	1373811	1373813	.	+	0	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=stop_codon:HG00140_ch_T0001727;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1373849	1377818	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=intron:HG00140_ch_T0001727:17;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1377819	1379675	.	+	.	source_transcript=ENST00000382365.7;source_transcript_name=DAZ3-202;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382365.7;alignment_mode=liftoff;normalized_transcript_id=ENST00000382365.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001727;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001727;transcript_name=HG00140_ch_T0001727;gene_name=DAZ3;ID=exon:HG00140_ch_T0001727:18;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	1368199	1378987	1000	+	.	source_transcript=ENST00000691059.1;source_transcript_name=DAZ3-204;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000691059.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691059.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001728;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_G0000629;transcript_name=HG00140_ch_T0001728;gene_name=DAZ3;ID=HG00140_ch_T0001728;Name=DAZ3
HG00140_chrY_random0000005	CAT	exon	1368199	1368397	.	+	.	source_transcript=ENST00000691059.1;source_transcript_name=DAZ3-204;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000691059.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691059.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001728;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001728;transcript_name=HG00140_ch_T0001728;gene_name=DAZ3;ID=exon:HG00140_ch_T0001728:0;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1368398	1369142	.	+	.	source_transcript=ENST00000691059.1;source_transcript_name=DAZ3-204;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000691059.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691059.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001728;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001728;transcript_name=HG00140_ch_T0001728;gene_name=DAZ3;ID=intron:HG00140_ch_T0001728:0;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1369143	1369177	.	+	.	source_transcript=ENST00000691059.1;source_transcript_name=DAZ3-204;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000691059.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691059.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001728;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001728;transcript_name=HG00140_ch_T0001728;gene_name=DAZ3;ID=exon:HG00140_ch_T0001728:1;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1369178	1373749	.	+	.	source_transcript=ENST00000691059.1;source_transcript_name=DAZ3-204;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000691059.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691059.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001728;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001728;transcript_name=HG00140_ch_T0001728;gene_name=DAZ3;ID=intron:HG00140_ch_T0001728:1;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1373750	1373848	.	+	.	source_transcript=ENST00000691059.1;source_transcript_name=DAZ3-204;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000691059.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691059.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001728;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001728;transcript_name=HG00140_ch_T0001728;gene_name=DAZ3;ID=exon:HG00140_ch_T0001728:2;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1373849	1377818	.	+	.	source_transcript=ENST00000691059.1;source_transcript_name=DAZ3-204;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000691059.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691059.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001728;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001728;transcript_name=HG00140_ch_T0001728;gene_name=DAZ3;ID=intron:HG00140_ch_T0001728:2;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1377819	1378987	.	+	.	source_transcript=ENST00000691059.1;source_transcript_name=DAZ3-204;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000691059.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000691059.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001728;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001728;transcript_name=HG00140_ch_T0001728;gene_name=DAZ3;ID=exon:HG00140_ch_T0001728:3;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	1368211	1379667	1000	+	.	source_transcript=ENST00000692367.1;source_transcript_name=DAZ3-205;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000692367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000692367.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001729;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_G0000629;transcript_name=HG00140_ch_T0001729;gene_name=DAZ3;ID=HG00140_ch_T0001729;Name=DAZ3
HG00140_chrY_random0000005	CAT	exon	1368211	1368397	.	+	.	source_transcript=ENST00000692367.1;source_transcript_name=DAZ3-205;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000692367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000692367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001729;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001729;transcript_name=HG00140_ch_T0001729;gene_name=DAZ3;ID=exon:HG00140_ch_T0001729:0;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1368398	1369142	.	+	.	source_transcript=ENST00000692367.1;source_transcript_name=DAZ3-205;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000692367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000692367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001729;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001729;transcript_name=HG00140_ch_T0001729;gene_name=DAZ3;ID=intron:HG00140_ch_T0001729:0;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1369143	1369177	.	+	.	source_transcript=ENST00000692367.1;source_transcript_name=DAZ3-205;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000692367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000692367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001729;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001729;transcript_name=HG00140_ch_T0001729;gene_name=DAZ3;ID=exon:HG00140_ch_T0001729:1;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1369178	1370742	.	+	.	source_transcript=ENST00000692367.1;source_transcript_name=DAZ3-205;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000692367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000692367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001729;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001729;transcript_name=HG00140_ch_T0001729;gene_name=DAZ3;ID=intron:HG00140_ch_T0001729:1;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1370743	1370814	.	+	.	source_transcript=ENST00000692367.1;source_transcript_name=DAZ3-205;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000692367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000692367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001729;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001729;transcript_name=HG00140_ch_T0001729;gene_name=DAZ3;ID=exon:HG00140_ch_T0001729:2;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1370815	1373749	.	+	.	source_transcript=ENST00000692367.1;source_transcript_name=DAZ3-205;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000692367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000692367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001729;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001729;transcript_name=HG00140_ch_T0001729;gene_name=DAZ3;ID=intron:HG00140_ch_T0001729:2;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1373750	1373848	.	+	.	source_transcript=ENST00000692367.1;source_transcript_name=DAZ3-205;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000692367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000692367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001729;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001729;transcript_name=HG00140_ch_T0001729;gene_name=DAZ3;ID=exon:HG00140_ch_T0001729:3;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1373849	1377818	.	+	.	source_transcript=ENST00000692367.1;source_transcript_name=DAZ3-205;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000692367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000692367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001729;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001729;transcript_name=HG00140_ch_T0001729;gene_name=DAZ3;ID=intron:HG00140_ch_T0001729:3;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1377819	1379667	.	+	.	source_transcript=ENST00000692367.1;source_transcript_name=DAZ3-205;source_gene=ENSG00000187191.16;source_gene_biotype=protein_coding;original_gene_id=ENSG00000187191.16;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000692367.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000692367.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG00140_ch_T0001729;gene_id=HG00140_ch_G0000629;Parent=HG00140_ch_T0001729;transcript_name=HG00140_ch_T0001729;gene_name=DAZ3;ID=exon:HG00140_ch_T0001729:4;Name=DAZ3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	1449822	1450978	.	-	.	source_gene_common_name=TRIM60P9Y;source_gene=ENSG00000227251.1;gene_id=HG00140_ch_G0000630;gene_biotype=processed_pseudogene;gene_name=TRIM60P9Y;gene_sources=liftoff;ID=HG00140_ch_G0000630;Name=TRIM60P9Y
HG00140_chrY_random0000005	CAT	transcript	1449822	1450978	1000	-	.	source_transcript=ENST00000438459.1;source_transcript_name=TRIM60P9Y-201;source_gene=ENSG00000227251.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227251.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000438459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438459.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P9Y;transcript_id=HG00140_ch_T0001730;gene_id=HG00140_ch_G0000630;Parent=HG00140_ch_G0000630;transcript_name=HG00140_ch_T0001730;gene_name=TRIM60P9Y;ID=HG00140_ch_T0001730;Name=TRIM60P9Y
HG00140_chrY_random0000005	CAT	exon	1449822	1450337	.	-	.	source_transcript=ENST00000438459.1;source_transcript_name=TRIM60P9Y-201;source_gene=ENSG00000227251.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227251.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000438459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438459.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P9Y;transcript_id=HG00140_ch_T0001730;gene_id=HG00140_ch_G0000630;Parent=HG00140_ch_T0001730;transcript_name=HG00140_ch_T0001730;gene_name=TRIM60P9Y;ID=exon:HG00140_ch_T0001730:0;Name=TRIM60P9Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1450338	1450678	.	-	.	source_transcript=ENST00000438459.1;source_transcript_name=TRIM60P9Y-201;source_gene=ENSG00000227251.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227251.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000438459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438459.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P9Y;transcript_id=HG00140_ch_T0001730;gene_id=HG00140_ch_G0000630;Parent=HG00140_ch_T0001730;transcript_name=HG00140_ch_T0001730;gene_name=TRIM60P9Y;ID=intron:HG00140_ch_T0001730:0;Name=TRIM60P9Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1450679	1450978	.	-	.	source_transcript=ENST00000438459.1;source_transcript_name=TRIM60P9Y-201;source_gene=ENSG00000227251.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227251.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000438459.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000438459.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P9Y;transcript_id=HG00140_ch_T0001730;gene_id=HG00140_ch_G0000630;Parent=HG00140_ch_T0001730;transcript_name=HG00140_ch_T0001730;gene_name=TRIM60P9Y;ID=exon:HG00140_ch_T0001730:1;Name=TRIM60P9Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	1457856	1459131	.	-	.	source_gene_common_name=ZNF736P1Y;source_gene=ENSG00000223978.1;alternative_source_transcripts=ENST00000440402.1;gene_id=HG00140_ch_G0000631;gene_biotype=processed_pseudogene;gene_name=ZNF736P1Y;gene_sources=liftoff;ID=HG00140_ch_G0000631;Name=ZNF736P1Y
HG00140_chrY_random0000005	CAT	transcript	1457856	1459131	1000	-	.	source_transcript=ENST00000440402.1;source_transcript_name=ZNF736P1Y-201;source_gene=ENSG00000223978.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000223978.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000440402.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440402.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P1Y;alternative_source_transcripts=ENST00000440402.1;transcript_id=HG00140_ch_T0001731;gene_id=HG00140_ch_G0000631;Parent=HG00140_ch_G0000631;transcript_name=HG00140_ch_T0001731;gene_name=ZNF736P1Y;ID=HG00140_ch_T0001731;Name=ZNF736P1Y
HG00140_chrY_random0000005	CAT	exon	1457856	1459131	.	-	.	source_transcript=ENST00000440402.1;source_transcript_name=ZNF736P1Y-201;source_gene=ENSG00000223978.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000223978.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000440402.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440402.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P1Y;alternative_source_transcripts=ENST00000440402.1;transcript_id=HG00140_ch_T0001731;gene_id=HG00140_ch_G0000631;Parent=HG00140_ch_T0001731;transcript_name=HG00140_ch_T0001731;gene_name=ZNF736P1Y;ID=exon:HG00140_ch_T0001731:0;Name=ZNF736P1Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	1482352	1483421	.	-	.	source_gene_common_name=ENSG00000278197;source_gene=ENSG00000278197.1;gene_id=HG00140_ch_G0000632;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000278197;gene_sources=liftoff;ID=HG00140_ch_G0000632;Name=ENSG00000278197
HG00140_chrY_random0000005	CAT	transcript	1482352	1483421	1000	-	.	source_transcript=ENST00000618453.1;source_transcript_name=ENST00000618453;source_gene=ENSG00000278197.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000278197.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000618453.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618453.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278197;transcript_id=HG00140_ch_T0001732;gene_id=HG00140_ch_G0000632;Parent=HG00140_ch_G0000632;transcript_name=HG00140_ch_T0001732;gene_name=ENSG00000278197;ID=HG00140_ch_T0001732;Name=ENSG00000278197
HG00140_chrY_random0000005	CAT	exon	1482352	1482873	.	-	.	source_transcript=ENST00000618453.1;source_transcript_name=ENST00000618453;source_gene=ENSG00000278197.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000278197.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000618453.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278197;transcript_id=HG00140_ch_T0001732;gene_id=HG00140_ch_G0000632;Parent=HG00140_ch_T0001732;transcript_name=HG00140_ch_T0001732;gene_name=ENSG00000278197;ID=exon:HG00140_ch_T0001732:0;Name=ENSG00000278197;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1482874	1483194	.	-	.	source_transcript=ENST00000618453.1;source_transcript_name=ENST00000618453;source_gene=ENSG00000278197.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000278197.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000618453.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278197;transcript_id=HG00140_ch_T0001732;gene_id=HG00140_ch_G0000632;Parent=HG00140_ch_T0001732;transcript_name=HG00140_ch_T0001732;gene_name=ENSG00000278197;ID=intron:HG00140_ch_T0001732:0;Name=ENSG00000278197;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1483195	1483421	.	-	.	source_transcript=ENST00000618453.1;source_transcript_name=ENST00000618453;source_gene=ENSG00000278197.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000278197.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000618453.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000278197;transcript_id=HG00140_ch_T0001732;gene_id=HG00140_ch_G0000632;Parent=HG00140_ch_T0001732;transcript_name=HG00140_ch_T0001732;gene_name=ENSG00000278197;ID=exon:HG00140_ch_T0001732:1;Name=ENSG00000278197;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	1491152	1491956	.	-	.	source_gene_common_name=ZNF736P5Y;source_gene=ENSG00000230819.1;gene_id=HG00140_ch_G0000633;gene_biotype=processed_pseudogene;gene_name=ZNF736P5Y;gene_sources=liftoff;ID=HG00140_ch_G0000633;Name=ZNF736P5Y
HG00140_chrY_random0000005	CAT	transcript	1491152	1491956	1000	-	.	source_transcript=ENST00000451173.1;source_transcript_name=ZNF736P5Y-201;source_gene=ENSG00000230819.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000230819.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000451173.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451173.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P5Y;transcript_id=HG00140_ch_T0001733;gene_id=HG00140_ch_G0000633;Parent=HG00140_ch_G0000633;transcript_name=HG00140_ch_T0001733;gene_name=ZNF736P5Y;ID=HG00140_ch_T0001733;Name=ZNF736P5Y
HG00140_chrY_random0000005	CAT	exon	1491152	1491956	.	-	.	source_transcript=ENST00000451173.1;source_transcript_name=ZNF736P5Y-201;source_gene=ENSG00000230819.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000230819.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000451173.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451173.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P5Y;transcript_id=HG00140_ch_T0001733;gene_id=HG00140_ch_G0000633;Parent=HG00140_ch_T0001733;transcript_name=HG00140_ch_T0001733;gene_name=ZNF736P5Y;ID=exon:HG00140_ch_T0001733:0;Name=ZNF736P5Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	1503553	1535200	.	-	.	source_gene_common_name=BPY2;source_gene=ENSG00000183753.10;alternative_source_transcripts=ENST00000382392.5;gene_id=HG00140_ch_G0000634;gene_biotype=protein_coding;gene_name=BPY2;gene_sources=liftoff;ID=HG00140_ch_G0000634;Name=BPY2
HG00140_chrY_random0000005	CAT	transcript	1503553	1524756	100	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382392.5;transcript_id=HG00140_ch_T0001734;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_G0000634;transcript_name=HG00140_ch_T0001734;gene_name=BPY2;ID=HG00140_ch_T0001734;Name=BPY2
HG00140_chrY_random0000005	CAT	exon	1503553	1503874	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382392.5;transcript_id=HG00140_ch_T0001734;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001734;transcript_name=HG00140_ch_T0001734;gene_name=BPY2;ID=exon:HG00140_ch_T0001734:0;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1503875	1503968	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382392.5;transcript_id=HG00140_ch_T0001734;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001734;transcript_name=HG00140_ch_T0001734;gene_name=BPY2;ID=intron:HG00140_ch_T0001734:0;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1503969	1504093	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382392.5;transcript_id=HG00140_ch_T0001734;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001734;transcript_name=HG00140_ch_T0001734;gene_name=BPY2;ID=exon:HG00140_ch_T0001734:1;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1504094	1510643	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382392.5;transcript_id=HG00140_ch_T0001734;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001734;transcript_name=HG00140_ch_T0001734;gene_name=BPY2;ID=intron:HG00140_ch_T0001734:1;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1510644	1510768	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382392.5;transcript_id=HG00140_ch_T0001734;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001734;transcript_name=HG00140_ch_T0001734;gene_name=BPY2;ID=exon:HG00140_ch_T0001734:2;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1510750	1510768	.	-	1	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382392.5;transcript_id=HG00140_ch_T0001734;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001734;transcript_name=HG00140_ch_T0001734;gene_name=BPY2;ID=CDS:HG00140_ch_T0001734:0;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	stop_codon	1510750	1510752	.	-	0	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382392.5;transcript_id=HG00140_ch_T0001734;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001734;transcript_name=HG00140_ch_T0001734;gene_name=BPY2;ID=stop_codon:HG00140_ch_T0001734;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1510769	1511460	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382392.5;transcript_id=HG00140_ch_T0001734;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001734;transcript_name=HG00140_ch_T0001734;gene_name=BPY2;ID=intron:HG00140_ch_T0001734:2;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1511461	1511566	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382392.5;transcript_id=HG00140_ch_T0001734;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001734;transcript_name=HG00140_ch_T0001734;gene_name=BPY2;ID=exon:HG00140_ch_T0001734:3;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1511461	1511566	.	-	2	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382392.5;transcript_id=HG00140_ch_T0001734;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001734;transcript_name=HG00140_ch_T0001734;gene_name=BPY2;ID=CDS:HG00140_ch_T0001734:1;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1511567	1514420	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382392.5;transcript_id=HG00140_ch_T0001734;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001734;transcript_name=HG00140_ch_T0001734;gene_name=BPY2;ID=intron:HG00140_ch_T0001734:3;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1514421	1514538	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382392.5;transcript_id=HG00140_ch_T0001734;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001734;transcript_name=HG00140_ch_T0001734;gene_name=BPY2;ID=exon:HG00140_ch_T0001734:4;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1514421	1514538	.	-	0	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382392.5;transcript_id=HG00140_ch_T0001734;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001734;transcript_name=HG00140_ch_T0001734;gene_name=BPY2;ID=CDS:HG00140_ch_T0001734:2;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1514539	1516597	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382392.5;transcript_id=HG00140_ch_T0001734;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001734;transcript_name=HG00140_ch_T0001734;gene_name=BPY2;ID=intron:HG00140_ch_T0001734:4;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1516598	1516716	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382392.5;transcript_id=HG00140_ch_T0001734;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001734;transcript_name=HG00140_ch_T0001734;gene_name=BPY2;ID=exon:HG00140_ch_T0001734:5;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1516598	1516675	.	-	0	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382392.5;transcript_id=HG00140_ch_T0001734;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001734;transcript_name=HG00140_ch_T0001734;gene_name=BPY2;ID=CDS:HG00140_ch_T0001734:3;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	start_codon	1516673	1516675	.	-	0	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382392.5;transcript_id=HG00140_ch_T0001734;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001734;transcript_name=HG00140_ch_T0001734;gene_name=BPY2;ID=start_codon:HG00140_ch_T0001734;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1516717	1521125	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382392.5;transcript_id=HG00140_ch_T0001734;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001734;transcript_name=HG00140_ch_T0001734;gene_name=BPY2;ID=intron:HG00140_ch_T0001734:5;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1521126	1521262	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382392.5;transcript_id=HG00140_ch_T0001734;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001734;transcript_name=HG00140_ch_T0001734;gene_name=BPY2;ID=exon:HG00140_ch_T0001734:6;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1521263	1524327	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382392.5;transcript_id=HG00140_ch_T0001734;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001734;transcript_name=HG00140_ch_T0001734;gene_name=BPY2;ID=intron:HG00140_ch_T0001734:6;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1524328	1524450	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382392.5;transcript_id=HG00140_ch_T0001734;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001734;transcript_name=HG00140_ch_T0001734;gene_name=BPY2;ID=exon:HG00140_ch_T0001734:7;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1524451	1524725	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382392.5;transcript_id=HG00140_ch_T0001734;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001734;transcript_name=HG00140_ch_T0001734;gene_name=BPY2;ID=intron:HG00140_ch_T0001734:7;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1524726	1524756	.	-	.	source_transcript=ENST00000331070.8;source_transcript_name=BPY2-201;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000331070.8;alignment_mode=liftoff;normalized_transcript_id=ENST00000331070.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000382392.5;transcript_id=HG00140_ch_T0001734;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001734;transcript_name=HG00140_ch_T0001734;gene_name=BPY2;ID=exon:HG00140_ch_T0001734:8;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	1503612	1524732	1000	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602549.1;transcript_id=HG00140_ch_T0001735;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_G0000634;transcript_name=HG00140_ch_T0001735;gene_name=BPY2;ID=HG00140_ch_T0001735;Name=BPY2
HG00140_chrY_random0000005	CAT	exon	1503612	1503874	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602549.1;transcript_id=HG00140_ch_T0001735;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001735;transcript_name=HG00140_ch_T0001735;gene_name=BPY2;ID=exon:HG00140_ch_T0001735:0;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1503875	1503963	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602549.1;transcript_id=HG00140_ch_T0001735;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001735;transcript_name=HG00140_ch_T0001735;gene_name=BPY2;ID=intron:HG00140_ch_T0001735:0;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1503964	1504093	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602549.1;transcript_id=HG00140_ch_T0001735;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001735;transcript_name=HG00140_ch_T0001735;gene_name=BPY2;ID=exon:HG00140_ch_T0001735:1;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1504094	1510643	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602549.1;transcript_id=HG00140_ch_T0001735;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001735;transcript_name=HG00140_ch_T0001735;gene_name=BPY2;ID=intron:HG00140_ch_T0001735:1;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1510644	1510768	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602549.1;transcript_id=HG00140_ch_T0001735;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001735;transcript_name=HG00140_ch_T0001735;gene_name=BPY2;ID=exon:HG00140_ch_T0001735:2;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1510769	1511460	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602549.1;transcript_id=HG00140_ch_T0001735;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001735;transcript_name=HG00140_ch_T0001735;gene_name=BPY2;ID=intron:HG00140_ch_T0001735:2;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1511461	1511566	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602549.1;transcript_id=HG00140_ch_T0001735;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001735;transcript_name=HG00140_ch_T0001735;gene_name=BPY2;ID=exon:HG00140_ch_T0001735:3;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1511567	1516597	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602549.1;transcript_id=HG00140_ch_T0001735;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001735;transcript_name=HG00140_ch_T0001735;gene_name=BPY2;ID=intron:HG00140_ch_T0001735:3;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1516598	1516716	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602549.1;transcript_id=HG00140_ch_T0001735;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001735;transcript_name=HG00140_ch_T0001735;gene_name=BPY2;ID=exon:HG00140_ch_T0001735:4;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1516717	1521125	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602549.1;transcript_id=HG00140_ch_T0001735;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001735;transcript_name=HG00140_ch_T0001735;gene_name=BPY2;ID=intron:HG00140_ch_T0001735:4;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1521126	1521262	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602549.1;transcript_id=HG00140_ch_T0001735;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001735;transcript_name=HG00140_ch_T0001735;gene_name=BPY2;ID=exon:HG00140_ch_T0001735:5;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1521263	1524327	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602549.1;transcript_id=HG00140_ch_T0001735;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001735;transcript_name=HG00140_ch_T0001735;gene_name=BPY2;ID=intron:HG00140_ch_T0001735:5;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1524328	1524450	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602549.1;transcript_id=HG00140_ch_T0001735;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001735;transcript_name=HG00140_ch_T0001735;gene_name=BPY2;ID=exon:HG00140_ch_T0001735:6;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1524451	1524725	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602549.1;transcript_id=HG00140_ch_T0001735;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001735;transcript_name=HG00140_ch_T0001735;gene_name=BPY2;ID=intron:HG00140_ch_T0001735:6;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1524726	1524732	.	-	.	source_transcript=ENST00000602818.2;source_transcript_name=BPY2-204;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000602818.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000602818.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000602549.1;transcript_id=HG00140_ch_T0001735;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001735;transcript_name=HG00140_ch_T0001735;gene_name=BPY2;ID=exon:HG00140_ch_T0001735:7;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	1510750	1516675	100	-	.	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000615850.1;transcript_id=HG00140_ch_T0001736;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_G0000634;transcript_name=HG00140_ch_T0001736;gene_name=BPY2;ID=HG00140_ch_T0001736;Name=BPY2
HG00140_chrY_random0000005	CAT	exon	1510750	1510768	.	-	.	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000615850.1;transcript_id=HG00140_ch_T0001736;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001736;transcript_name=HG00140_ch_T0001736;gene_name=BPY2;ID=exon:HG00140_ch_T0001736:0;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1510750	1510768	.	-	1	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000615850.1;transcript_id=HG00140_ch_T0001736;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001736;transcript_name=HG00140_ch_T0001736;gene_name=BPY2;ID=CDS:HG00140_ch_T0001736:0;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	stop_codon	1510750	1510752	.	-	0	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000615850.1;transcript_id=HG00140_ch_T0001736;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001736;transcript_name=HG00140_ch_T0001736;gene_name=BPY2;ID=stop_codon:HG00140_ch_T0001736;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1510769	1511460	.	-	.	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000615850.1;transcript_id=HG00140_ch_T0001736;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001736;transcript_name=HG00140_ch_T0001736;gene_name=BPY2;ID=intron:HG00140_ch_T0001736:0;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1511461	1511566	.	-	.	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000615850.1;transcript_id=HG00140_ch_T0001736;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001736;transcript_name=HG00140_ch_T0001736;gene_name=BPY2;ID=exon:HG00140_ch_T0001736:1;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1511461	1511566	.	-	2	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000615850.1;transcript_id=HG00140_ch_T0001736;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001736;transcript_name=HG00140_ch_T0001736;gene_name=BPY2;ID=CDS:HG00140_ch_T0001736:1;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1511567	1514420	.	-	.	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000615850.1;transcript_id=HG00140_ch_T0001736;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001736;transcript_name=HG00140_ch_T0001736;gene_name=BPY2;ID=intron:HG00140_ch_T0001736:1;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1514421	1514538	.	-	.	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000615850.1;transcript_id=HG00140_ch_T0001736;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001736;transcript_name=HG00140_ch_T0001736;gene_name=BPY2;ID=exon:HG00140_ch_T0001736:2;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1514421	1514538	.	-	0	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000615850.1;transcript_id=HG00140_ch_T0001736;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001736;transcript_name=HG00140_ch_T0001736;gene_name=BPY2;ID=CDS:HG00140_ch_T0001736:2;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1514539	1516597	.	-	.	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000615850.1;transcript_id=HG00140_ch_T0001736;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001736;transcript_name=HG00140_ch_T0001736;gene_name=BPY2;ID=intron:HG00140_ch_T0001736:2;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1516598	1516675	.	-	.	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000615850.1;transcript_id=HG00140_ch_T0001736;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001736;transcript_name=HG00140_ch_T0001736;gene_name=BPY2;ID=exon:HG00140_ch_T0001736:3;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1516598	1516675	.	-	0	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000615850.1;transcript_id=HG00140_ch_T0001736;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001736;transcript_name=HG00140_ch_T0001736;gene_name=BPY2;ID=CDS:HG00140_ch_T0001736:3;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	start_codon	1516673	1516675	.	-	0	source_transcript=ENST00000382585.2;source_transcript_name=BPY2-202;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382585.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000382585.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=ENST00000615850.1;transcript_id=HG00140_ch_T0001736;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001736;transcript_name=HG00140_ch_T0001736;gene_name=BPY2;ID=start_codon:HG00140_ch_T0001736;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	1516643	1535200	100	-	.	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG00140_ch_T0001737;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_G0000634;transcript_name=HG00140_ch_T0001737;gene_name=BPY2;ID=HG00140_ch_T0001737;Name=BPY2
HG00140_chrY_random0000005	CAT	exon	1516643	1516716	.	-	.	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG00140_ch_T0001737;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001737;transcript_name=HG00140_ch_T0001737;gene_name=BPY2;ID=exon:HG00140_ch_T0001737:0;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	1516643	1516675	.	-	0	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG00140_ch_T0001737;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001737;transcript_name=HG00140_ch_T0001737;gene_name=BPY2;ID=CDS:HG00140_ch_T0001737:0;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	start_codon	1516673	1516675	.	-	0	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG00140_ch_T0001737;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001737;transcript_name=HG00140_ch_T0001737;gene_name=BPY2;ID=start_codon:HG00140_ch_T0001737;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1516717	1521125	.	-	.	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG00140_ch_T0001737;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001737;transcript_name=HG00140_ch_T0001737;gene_name=BPY2;ID=intron:HG00140_ch_T0001737:0;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1521126	1521262	.	-	.	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG00140_ch_T0001737;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001737;transcript_name=HG00140_ch_T0001737;gene_name=BPY2;ID=exon:HG00140_ch_T0001737:1;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1521263	1524327	.	-	.	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG00140_ch_T0001737;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001737;transcript_name=HG00140_ch_T0001737;gene_name=BPY2;ID=intron:HG00140_ch_T0001737:1;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1524328	1524450	.	-	.	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG00140_ch_T0001737;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001737;transcript_name=HG00140_ch_T0001737;gene_name=BPY2;ID=exon:HG00140_ch_T0001737:2;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1524451	1524802	.	-	.	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG00140_ch_T0001737;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001737;transcript_name=HG00140_ch_T0001737;gene_name=BPY2;ID=intron:HG00140_ch_T0001737:2;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1524803	1524871	.	-	.	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG00140_ch_T0001737;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001737;transcript_name=HG00140_ch_T0001737;gene_name=BPY2;ID=exon:HG00140_ch_T0001737:3;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1524872	1535044	.	-	.	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG00140_ch_T0001737;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001737;transcript_name=HG00140_ch_T0001737;gene_name=BPY2;ID=intron:HG00140_ch_T0001737:3;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1535045	1535200	.	-	.	source_transcript=ENST00000602732.5;source_transcript_name=BPY2-203;source_gene=ENSG00000183753.10;source_gene_biotype=protein_coding;original_gene_id=ENSG00000183753.10;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000602732.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000602732.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;transcript_id=HG00140_ch_T0001737;gene_id=HG00140_ch_G0000634;Parent=HG00140_ch_T0001737;transcript_name=HG00140_ch_T0001737;gene_name=BPY2;ID=exon:HG00140_ch_T0001737:4;Name=BPY2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	1535735	1572560	.	-	.	source_gene_common_name=TTTY4;source_gene=ENSG00000226906.1;alternative_source_transcripts=ENST00000420149.1;gene_id=HG00140_ch_G0000635;gene_biotype=lncRNA;gene_name=TTTY4;gene_sources=liftoff;ID=HG00140_ch_G0000635;Name=TTTY4
HG00140_chrY_random0000005	CAT	transcript	1535735	1572560	1000	-	.	source_transcript=ENST00000436568.1;source_transcript_name=TTTY4-201;source_gene=ENSG00000226906.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000226906.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436568.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436568.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=ENST00000420149.1;transcript_id=HG00140_ch_T0001738;gene_id=HG00140_ch_G0000635;Parent=HG00140_ch_G0000635;transcript_name=HG00140_ch_T0001738;gene_name=TTTY4;ID=HG00140_ch_T0001738;Name=TTTY4
HG00140_chrY_random0000005	CAT	exon	1535735	1536735	.	-	.	source_transcript=ENST00000436568.1;source_transcript_name=TTTY4-201;source_gene=ENSG00000226906.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000226906.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436568.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436568.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=ENST00000420149.1;transcript_id=HG00140_ch_T0001738;gene_id=HG00140_ch_G0000635;Parent=HG00140_ch_T0001738;transcript_name=HG00140_ch_T0001738;gene_name=TTTY4;ID=exon:HG00140_ch_T0001738:0;Name=TTTY4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1536736	1543403	.	-	.	source_transcript=ENST00000436568.1;source_transcript_name=TTTY4-201;source_gene=ENSG00000226906.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000226906.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436568.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436568.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=ENST00000420149.1;transcript_id=HG00140_ch_T0001738;gene_id=HG00140_ch_G0000635;Parent=HG00140_ch_T0001738;transcript_name=HG00140_ch_T0001738;gene_name=TTTY4;ID=intron:HG00140_ch_T0001738:0;Name=TTTY4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1543404	1543511	.	-	.	source_transcript=ENST00000436568.1;source_transcript_name=TTTY4-201;source_gene=ENSG00000226906.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000226906.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436568.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436568.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=ENST00000420149.1;transcript_id=HG00140_ch_T0001738;gene_id=HG00140_ch_G0000635;Parent=HG00140_ch_T0001738;transcript_name=HG00140_ch_T0001738;gene_name=TTTY4;ID=exon:HG00140_ch_T0001738:1;Name=TTTY4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1543512	1545315	.	-	.	source_transcript=ENST00000436568.1;source_transcript_name=TTTY4-201;source_gene=ENSG00000226906.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000226906.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436568.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436568.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=ENST00000420149.1;transcript_id=HG00140_ch_T0001738;gene_id=HG00140_ch_G0000635;Parent=HG00140_ch_T0001738;transcript_name=HG00140_ch_T0001738;gene_name=TTTY4;ID=intron:HG00140_ch_T0001738:1;Name=TTTY4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1545316	1545391	.	-	.	source_transcript=ENST00000436568.1;source_transcript_name=TTTY4-201;source_gene=ENSG00000226906.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000226906.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436568.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436568.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=ENST00000420149.1;transcript_id=HG00140_ch_T0001738;gene_id=HG00140_ch_G0000635;Parent=HG00140_ch_T0001738;transcript_name=HG00140_ch_T0001738;gene_name=TTTY4;ID=exon:HG00140_ch_T0001738:2;Name=TTTY4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1545392	1572399	.	-	.	source_transcript=ENST00000436568.1;source_transcript_name=TTTY4-201;source_gene=ENSG00000226906.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000226906.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436568.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436568.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=ENST00000420149.1;transcript_id=HG00140_ch_T0001738;gene_id=HG00140_ch_G0000635;Parent=HG00140_ch_T0001738;transcript_name=HG00140_ch_T0001738;gene_name=TTTY4;ID=intron:HG00140_ch_T0001738:2;Name=TTTY4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1572400	1572560	.	-	.	source_transcript=ENST00000436568.1;source_transcript_name=TTTY4-201;source_gene=ENSG00000226906.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000226906.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000436568.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436568.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;alternative_source_transcripts=ENST00000420149.1;transcript_id=HG00140_ch_T0001738;gene_id=HG00140_ch_G0000635;Parent=HG00140_ch_T0001738;transcript_name=HG00140_ch_T0001738;gene_name=TTTY4;ID=exon:HG00140_ch_T0001738:3;Name=TTTY4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	1641258	1642470	.	+	.	source_gene_common_name=ZNF736P11Y;source_gene=ENSG00000215537.3;gene_id=HG00140_ch_G0000636;gene_biotype=processed_pseudogene;gene_name=ZNF736P11Y;gene_sources=liftoff;ID=HG00140_ch_G0000636;Name=ZNF736P11Y
HG00140_chrY_random0000005	CAT	transcript	1641258	1642470	1000	+	.	source_transcript=ENST00000442535.1;source_transcript_name=ZNF736P11Y-201;source_gene=ENSG00000215537.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000215537.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000442535.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442535.1;transcript_score=199.67000000000002;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P11Y;transcript_id=HG00140_ch_T0001739;gene_id=HG00140_ch_G0000636;Parent=HG00140_ch_G0000636;transcript_name=HG00140_ch_T0001739;gene_name=ZNF736P11Y;ID=HG00140_ch_T0001739;Name=ZNF736P11Y
HG00140_chrY_random0000005	CAT	exon	1641258	1642470	.	+	.	source_transcript=ENST00000442535.1;source_transcript_name=ZNF736P11Y-201;source_gene=ENSG00000215537.3;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000215537.3;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000442535.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442535.1;transcript_score=199.67000000000002;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZNF736P11Y;transcript_id=HG00140_ch_T0001739;gene_id=HG00140_ch_G0000636;Parent=HG00140_ch_T0001739;transcript_name=HG00140_ch_T0001739;gene_name=ZNF736P11Y;ID=exon:HG00140_ch_T0001739:0;Name=ZNF736P11Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	1647180	1648055	.	+	.	source_gene_common_name=TRIM60P5Y;source_gene=ENSG00000224210.1;gene_id=HG00140_ch_G0000637;gene_biotype=processed_pseudogene;gene_name=TRIM60P5Y;gene_sources=liftoff;ID=HG00140_ch_G0000637;Name=TRIM60P5Y
HG00140_chrY_random0000005	CAT	transcript	1647180	1648055	1000	+	.	source_transcript=ENST00000413946.1;source_transcript_name=TRIM60P5Y-201;source_gene=ENSG00000224210.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224210.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000413946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413946.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P5Y;transcript_id=HG00140_ch_T0001740;gene_id=HG00140_ch_G0000637;Parent=HG00140_ch_G0000637;transcript_name=HG00140_ch_T0001740;gene_name=TRIM60P5Y;ID=HG00140_ch_T0001740;Name=TRIM60P5Y
HG00140_chrY_random0000005	CAT	exon	1647180	1647455	.	+	.	source_transcript=ENST00000413946.1;source_transcript_name=TRIM60P5Y-201;source_gene=ENSG00000224210.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224210.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000413946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P5Y;transcript_id=HG00140_ch_T0001740;gene_id=HG00140_ch_G0000637;Parent=HG00140_ch_T0001740;transcript_name=HG00140_ch_T0001740;gene_name=TRIM60P5Y;ID=exon:HG00140_ch_T0001740:0;Name=TRIM60P5Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1647456	1647756	.	+	.	source_transcript=ENST00000413946.1;source_transcript_name=TRIM60P5Y-201;source_gene=ENSG00000224210.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224210.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000413946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P5Y;transcript_id=HG00140_ch_T0001740;gene_id=HG00140_ch_G0000637;Parent=HG00140_ch_T0001740;transcript_name=HG00140_ch_T0001740;gene_name=TRIM60P5Y;ID=intron:HG00140_ch_T0001740:0;Name=TRIM60P5Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1647757	1648055	.	+	.	source_transcript=ENST00000413946.1;source_transcript_name=TRIM60P5Y-201;source_gene=ENSG00000224210.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000224210.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000413946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413946.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRIM60P5Y;transcript_id=HG00140_ch_T0001740;gene_id=HG00140_ch_G0000637;Parent=HG00140_ch_T0001740;transcript_name=HG00140_ch_T0001740;gene_name=TRIM60P5Y;ID=exon:HG00140_ch_T0001740:1;Name=TRIM60P5Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	1656301	1657432	.	-	.	source_gene_common_name=TTTY17A;source_gene=ENSG00000228240.1;gene_id=HG00140_ch_G0000638;gene_biotype=lncRNA;gene_name=TTTY17A;gene_sources=liftoff;ID=HG00140_ch_G0000638;Name=TTTY17A
HG00140_chrY_random0000005	CAT	transcript	1656301	1657432	1000	-	.	source_transcript=ENST00000416110.1;source_transcript_name=TTTY17A-201;source_gene=ENSG00000228240.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228240.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000416110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416110.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;transcript_id=HG00140_ch_T0001741;gene_id=HG00140_ch_G0000638;Parent=HG00140_ch_G0000638;transcript_name=HG00140_ch_T0001741;gene_name=TTTY17A;ID=HG00140_ch_T0001741;Name=TTTY17A
HG00140_chrY_random0000005	CAT	exon	1656301	1656406	.	-	.	source_transcript=ENST00000416110.1;source_transcript_name=TTTY17A-201;source_gene=ENSG00000228240.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228240.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000416110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416110.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;transcript_id=HG00140_ch_T0001741;gene_id=HG00140_ch_G0000638;Parent=HG00140_ch_T0001741;transcript_name=HG00140_ch_T0001741;gene_name=TTTY17A;ID=exon:HG00140_ch_T0001741:0;Name=TTTY17A;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1656407	1657372	.	-	.	source_transcript=ENST00000416110.1;source_transcript_name=TTTY17A-201;source_gene=ENSG00000228240.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228240.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000416110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416110.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;transcript_id=HG00140_ch_T0001741;gene_id=HG00140_ch_G0000638;Parent=HG00140_ch_T0001741;transcript_name=HG00140_ch_T0001741;gene_name=TTTY17A;ID=intron:HG00140_ch_T0001741:0;Name=TTTY17A;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1657373	1657432	.	-	.	source_transcript=ENST00000416110.1;source_transcript_name=TTTY17A-201;source_gene=ENSG00000228240.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228240.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000416110.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416110.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;transcript_id=HG00140_ch_T0001741;gene_id=HG00140_ch_G0000638;Parent=HG00140_ch_T0001741;transcript_name=HG00140_ch_T0001741;gene_name=TTTY17A;ID=exon:HG00140_ch_T0001741:1;Name=TTTY17A;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	1686823	1691913	.	+	.	source_gene_common_name=ENSG00000308317;source_gene=ENSG00000308317.1;gene_id=HG00140_ch_G0000639;gene_biotype=lncRNA;gene_name=ENSG00000308317;gene_sources=liftoff;ID=HG00140_ch_G0000639;Name=ENSG00000308317
HG00140_chrY_random0000005	CAT	transcript	1686823	1691913	1000	+	.	source_transcript=ENST00000833217.1;source_transcript_name=ENST00000833217;source_gene=ENSG00000308317.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308317.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000833217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000833217.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308317;transcript_id=HG00140_ch_T0001742;gene_id=HG00140_ch_G0000639;Parent=HG00140_ch_G0000639;transcript_name=HG00140_ch_T0001742;gene_name=ENSG00000308317;ID=HG00140_ch_T0001742;Name=ENSG00000308317
HG00140_chrY_random0000005	CAT	exon	1686823	1686919	.	+	.	source_transcript=ENST00000833217.1;source_transcript_name=ENST00000833217;source_gene=ENSG00000308317.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308317.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000833217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000833217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308317;transcript_id=HG00140_ch_T0001742;gene_id=HG00140_ch_G0000639;Parent=HG00140_ch_T0001742;transcript_name=HG00140_ch_T0001742;gene_name=ENSG00000308317;ID=exon:HG00140_ch_T0001742:0;Name=ENSG00000308317;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1686920	1691571	.	+	.	source_transcript=ENST00000833217.1;source_transcript_name=ENST00000833217;source_gene=ENSG00000308317.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308317.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000833217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000833217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308317;transcript_id=HG00140_ch_T0001742;gene_id=HG00140_ch_G0000639;Parent=HG00140_ch_T0001742;transcript_name=HG00140_ch_T0001742;gene_name=ENSG00000308317;ID=intron:HG00140_ch_T0001742:0;Name=ENSG00000308317;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1691572	1691913	.	+	.	source_transcript=ENST00000833217.1;source_transcript_name=ENST00000833217;source_gene=ENSG00000308317.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000308317.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000833217.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000833217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000308317;transcript_id=HG00140_ch_T0001742;gene_id=HG00140_ch_G0000639;Parent=HG00140_ch_T0001742;transcript_name=HG00140_ch_T0001742;gene_name=ENSG00000308317;ID=exon:HG00140_ch_T0001742:1;Name=ENSG00000308317;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	1736891	1821482	.	+	.	source_gene_common_name=ENSG00000306715;source_gene=ENSG00000306715.1;gene_id=HG00140_ch_G0000640;gene_biotype=lncRNA;gene_name=ENSG00000306715;gene_sources=liftoff;ID=HG00140_ch_G0000640;Name=ENSG00000306715
HG00140_chrY_random0000005	CAT	transcript	1736891	1821482	1000	+	.	source_transcript=ENST00000820371.1;source_transcript_name=ENST00000820371;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820371.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;transcript_id=HG00140_ch_T0001743;gene_id=HG00140_ch_G0000640;Parent=HG00140_ch_G0000640;transcript_name=HG00140_ch_T0001743;gene_name=ENSG00000306715;ID=HG00140_ch_T0001743;Name=ENSG00000306715
HG00140_chrY_random0000005	CAT	exon	1736891	1736989	.	+	.	source_transcript=ENST00000820371.1;source_transcript_name=ENST00000820371;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;transcript_id=HG00140_ch_T0001743;gene_id=HG00140_ch_G0000640;Parent=HG00140_ch_T0001743;transcript_name=HG00140_ch_T0001743;gene_name=ENSG00000306715;ID=exon:HG00140_ch_T0001743:0;Name=ENSG00000306715;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1736990	1748589	.	+	.	source_transcript=ENST00000820371.1;source_transcript_name=ENST00000820371;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;transcript_id=HG00140_ch_T0001743;gene_id=HG00140_ch_G0000640;Parent=HG00140_ch_T0001743;transcript_name=HG00140_ch_T0001743;gene_name=ENSG00000306715;ID=intron:HG00140_ch_T0001743:0;Name=ENSG00000306715;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1748590	1748697	.	+	.	source_transcript=ENST00000820371.1;source_transcript_name=ENST00000820371;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;transcript_id=HG00140_ch_T0001743;gene_id=HG00140_ch_G0000640;Parent=HG00140_ch_T0001743;transcript_name=HG00140_ch_T0001743;gene_name=ENSG00000306715;ID=exon:HG00140_ch_T0001743:1;Name=ENSG00000306715;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1748698	1763147	.	+	.	source_transcript=ENST00000820371.1;source_transcript_name=ENST00000820371;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;transcript_id=HG00140_ch_T0001743;gene_id=HG00140_ch_G0000640;Parent=HG00140_ch_T0001743;transcript_name=HG00140_ch_T0001743;gene_name=ENSG00000306715;ID=intron:HG00140_ch_T0001743:1;Name=ENSG00000306715;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1763148	1763252	.	+	.	source_transcript=ENST00000820371.1;source_transcript_name=ENST00000820371;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;transcript_id=HG00140_ch_T0001743;gene_id=HG00140_ch_G0000640;Parent=HG00140_ch_T0001743;transcript_name=HG00140_ch_T0001743;gene_name=ENSG00000306715;ID=exon:HG00140_ch_T0001743:2;Name=ENSG00000306715;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1763253	1821070	.	+	.	source_transcript=ENST00000820371.1;source_transcript_name=ENST00000820371;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;transcript_id=HG00140_ch_T0001743;gene_id=HG00140_ch_G0000640;Parent=HG00140_ch_T0001743;transcript_name=HG00140_ch_T0001743;gene_name=ENSG00000306715;ID=intron:HG00140_ch_T0001743:2;Name=ENSG00000306715;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1821071	1821482	.	+	.	source_transcript=ENST00000820371.1;source_transcript_name=ENST00000820371;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820371.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820371.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;transcript_id=HG00140_ch_T0001743;gene_id=HG00140_ch_G0000640;Parent=HG00140_ch_T0001743;transcript_name=HG00140_ch_T0001743;gene_name=ENSG00000306715;ID=exon:HG00140_ch_T0001743:3;Name=ENSG00000306715;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	1736922	1768536	1000	+	.	source_transcript=ENST00000820372.1;source_transcript_name=ENST00000820372;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820372.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820372.1;transcript_id=HG00140_ch_T0001744;gene_id=HG00140_ch_G0000640;Parent=HG00140_ch_G0000640;transcript_name=HG00140_ch_T0001744;gene_name=ENSG00000306715;ID=HG00140_ch_T0001744;Name=ENSG00000306715
HG00140_chrY_random0000005	CAT	exon	1736922	1736989	.	+	.	source_transcript=ENST00000820372.1;source_transcript_name=ENST00000820372;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820372.1;transcript_id=HG00140_ch_T0001744;gene_id=HG00140_ch_G0000640;Parent=HG00140_ch_T0001744;transcript_name=HG00140_ch_T0001744;gene_name=ENSG00000306715;ID=exon:HG00140_ch_T0001744:0;Name=ENSG00000306715;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1736990	1748589	.	+	.	source_transcript=ENST00000820372.1;source_transcript_name=ENST00000820372;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820372.1;transcript_id=HG00140_ch_T0001744;gene_id=HG00140_ch_G0000640;Parent=HG00140_ch_T0001744;transcript_name=HG00140_ch_T0001744;gene_name=ENSG00000306715;ID=intron:HG00140_ch_T0001744:0;Name=ENSG00000306715;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1748590	1748697	.	+	.	source_transcript=ENST00000820372.1;source_transcript_name=ENST00000820372;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820372.1;transcript_id=HG00140_ch_T0001744;gene_id=HG00140_ch_G0000640;Parent=HG00140_ch_T0001744;transcript_name=HG00140_ch_T0001744;gene_name=ENSG00000306715;ID=exon:HG00140_ch_T0001744:1;Name=ENSG00000306715;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1748698	1763147	.	+	.	source_transcript=ENST00000820372.1;source_transcript_name=ENST00000820372;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820372.1;transcript_id=HG00140_ch_T0001744;gene_id=HG00140_ch_G0000640;Parent=HG00140_ch_T0001744;transcript_name=HG00140_ch_T0001744;gene_name=ENSG00000306715;ID=intron:HG00140_ch_T0001744:1;Name=ENSG00000306715;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1763148	1763252	.	+	.	source_transcript=ENST00000820372.1;source_transcript_name=ENST00000820372;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820372.1;transcript_id=HG00140_ch_T0001744;gene_id=HG00140_ch_G0000640;Parent=HG00140_ch_T0001744;transcript_name=HG00140_ch_T0001744;gene_name=ENSG00000306715;ID=exon:HG00140_ch_T0001744:2;Name=ENSG00000306715;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1763253	1767881	.	+	.	source_transcript=ENST00000820372.1;source_transcript_name=ENST00000820372;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820372.1;transcript_id=HG00140_ch_T0001744;gene_id=HG00140_ch_G0000640;Parent=HG00140_ch_T0001744;transcript_name=HG00140_ch_T0001744;gene_name=ENSG00000306715;ID=intron:HG00140_ch_T0001744:2;Name=ENSG00000306715;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1767882	1768536	.	+	.	source_transcript=ENST00000820372.1;source_transcript_name=ENST00000820372;source_gene=ENSG00000306715.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000306715.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000820372.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000820372.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000306715;alternative_source_transcripts=ENST00000820372.1;transcript_id=HG00140_ch_T0001744;gene_id=HG00140_ch_G0000640;Parent=HG00140_ch_T0001744;transcript_name=HG00140_ch_T0001744;gene_name=ENSG00000306715;ID=exon:HG00140_ch_T0001744:3;Name=ENSG00000306715;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	1739231	1746170	.	+	.	source_gene_common_name=RBMY2YP;source_gene=ENSG00000227633.1;gene_id=HG00140_ch_G0000641;gene_biotype=unprocessed_pseudogene;gene_name=RBMY2YP;gene_sources=liftoff;ID=HG00140_ch_G0000641;Name=RBMY2YP
HG00140_chrY_random0000005	CAT	transcript	1739231	1746170	1000	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;transcript_id=HG00140_ch_T0001745;gene_id=HG00140_ch_G0000641;Parent=HG00140_ch_G0000641;transcript_name=HG00140_ch_T0001745;gene_name=RBMY2YP;ID=HG00140_ch_T0001745;Name=RBMY2YP
HG00140_chrY_random0000005	CAT	exon	1739231	1739343	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;transcript_id=HG00140_ch_T0001745;gene_id=HG00140_ch_G0000641;Parent=HG00140_ch_T0001745;transcript_name=HG00140_ch_T0001745;gene_name=RBMY2YP;ID=exon:HG00140_ch_T0001745:0;Name=RBMY2YP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1739344	1739751	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;transcript_id=HG00140_ch_T0001745;gene_id=HG00140_ch_G0000641;Parent=HG00140_ch_T0001745;transcript_name=HG00140_ch_T0001745;gene_name=RBMY2YP;ID=intron:HG00140_ch_T0001745:0;Name=RBMY2YP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1739752	1739853	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;transcript_id=HG00140_ch_T0001745;gene_id=HG00140_ch_G0000641;Parent=HG00140_ch_T0001745;transcript_name=HG00140_ch_T0001745;gene_name=RBMY2YP;ID=exon:HG00140_ch_T0001745:1;Name=RBMY2YP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1739854	1742241	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;transcript_id=HG00140_ch_T0001745;gene_id=HG00140_ch_G0000641;Parent=HG00140_ch_T0001745;transcript_name=HG00140_ch_T0001745;gene_name=RBMY2YP;ID=intron:HG00140_ch_T0001745:1;Name=RBMY2YP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1742242	1742423	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;transcript_id=HG00140_ch_T0001745;gene_id=HG00140_ch_G0000641;Parent=HG00140_ch_T0001745;transcript_name=HG00140_ch_T0001745;gene_name=RBMY2YP;ID=exon:HG00140_ch_T0001745:2;Name=RBMY2YP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1742424	1745159	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;transcript_id=HG00140_ch_T0001745;gene_id=HG00140_ch_G0000641;Parent=HG00140_ch_T0001745;transcript_name=HG00140_ch_T0001745;gene_name=RBMY2YP;ID=intron:HG00140_ch_T0001745:2;Name=RBMY2YP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1745160	1745270	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;transcript_id=HG00140_ch_T0001745;gene_id=HG00140_ch_G0000641;Parent=HG00140_ch_T0001745;transcript_name=HG00140_ch_T0001745;gene_name=RBMY2YP;ID=exon:HG00140_ch_T0001745:3;Name=RBMY2YP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1745271	1745351	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;transcript_id=HG00140_ch_T0001745;gene_id=HG00140_ch_G0000641;Parent=HG00140_ch_T0001745;transcript_name=HG00140_ch_T0001745;gene_name=RBMY2YP;ID=intron:HG00140_ch_T0001745:3;Name=RBMY2YP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1745352	1745440	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;transcript_id=HG00140_ch_T0001745;gene_id=HG00140_ch_G0000641;Parent=HG00140_ch_T0001745;transcript_name=HG00140_ch_T0001745;gene_name=RBMY2YP;ID=exon:HG00140_ch_T0001745:4;Name=RBMY2YP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1745441	1745855	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;transcript_id=HG00140_ch_T0001745;gene_id=HG00140_ch_G0000641;Parent=HG00140_ch_T0001745;transcript_name=HG00140_ch_T0001745;gene_name=RBMY2YP;ID=intron:HG00140_ch_T0001745:4;Name=RBMY2YP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1745856	1746170	.	+	.	source_transcript=ENST00000423333.1;source_transcript_name=RBMY2YP-201;source_gene=ENSG00000227633.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227633.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423333.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2YP;transcript_id=HG00140_ch_T0001745;gene_id=HG00140_ch_G0000641;Parent=HG00140_ch_T0001745;transcript_name=HG00140_ch_T0001745;gene_name=RBMY2YP;ID=exon:HG00140_ch_T0001745:5;Name=RBMY2YP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	1780385	1780459	.	+	.	source_gene_common_name=ENSG00000279115;source_gene=ENSG00000279115.2;gene_id=HG00140_ch_G0000642;gene_biotype=processed_pseudogene;gene_name=ENSG00000279115;gene_sources=liftoff;ID=HG00140_ch_G0000642;Name=ENSG00000279115
HG00140_chrY_random0000005	CAT	transcript	1780385	1780459	1000	+	.	source_transcript=ENST00000624491.2;source_transcript_name=ENST00000624491;source_gene=ENSG00000279115.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000279115.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000624491.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000624491.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000279115;transcript_id=HG00140_ch_T0001746;gene_id=HG00140_ch_G0000642;Parent=HG00140_ch_G0000642;transcript_name=HG00140_ch_T0001746;gene_name=ENSG00000279115;ID=HG00140_ch_T0001746;Name=ENSG00000279115
HG00140_chrY_random0000005	CAT	exon	1780385	1780459	.	+	.	source_transcript=ENST00000624491.2;source_transcript_name=ENST00000624491;source_gene=ENSG00000279115.2;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000279115.2;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000624491.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000624491.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000279115;transcript_id=HG00140_ch_T0001746;gene_id=HG00140_ch_G0000642;Parent=HG00140_ch_T0001746;transcript_name=HG00140_ch_T0001746;gene_name=ENSG00000279115;ID=exon:HG00140_ch_T0001746:0;Name=ENSG00000279115;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	1850207	1867371	.	-	.	source_gene_common_name=SEPTIN14P23;source_gene=ENSG00000228786.7;gene_id=HG00140_ch_G0000643;gene_biotype=lncRNA;gene_name=SEPTIN14P23;gene_sources=liftoff;ID=HG00140_ch_G0000643;Name=SEPTIN14P23
HG00140_chrY_random0000005	CAT	transcript	1850207	1867371	1000	-	.	source_transcript=ENST00000427373.6;source_transcript_name=SEPTIN14P23-201;source_gene=ENSG00000228786.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228786.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427373.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000427373.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;transcript_id=HG00140_ch_T0001747;gene_id=HG00140_ch_G0000643;Parent=HG00140_ch_G0000643;transcript_name=HG00140_ch_T0001747;gene_name=SEPTIN14P23;ID=HG00140_ch_T0001747;Name=SEPTIN14P23
HG00140_chrY_random0000005	CAT	exon	1850207	1851529	.	-	.	source_transcript=ENST00000427373.6;source_transcript_name=SEPTIN14P23-201;source_gene=ENSG00000228786.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228786.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427373.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000427373.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;transcript_id=HG00140_ch_T0001747;gene_id=HG00140_ch_G0000643;Parent=HG00140_ch_T0001747;transcript_name=HG00140_ch_T0001747;gene_name=SEPTIN14P23;ID=exon:HG00140_ch_T0001747:0;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1851530	1859567	.	-	.	source_transcript=ENST00000427373.6;source_transcript_name=SEPTIN14P23-201;source_gene=ENSG00000228786.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228786.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427373.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000427373.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;transcript_id=HG00140_ch_T0001747;gene_id=HG00140_ch_G0000643;Parent=HG00140_ch_T0001747;transcript_name=HG00140_ch_T0001747;gene_name=SEPTIN14P23;ID=intron:HG00140_ch_T0001747:0;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1859568	1859736	.	-	.	source_transcript=ENST00000427373.6;source_transcript_name=SEPTIN14P23-201;source_gene=ENSG00000228786.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228786.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427373.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000427373.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;transcript_id=HG00140_ch_T0001747;gene_id=HG00140_ch_G0000643;Parent=HG00140_ch_T0001747;transcript_name=HG00140_ch_T0001747;gene_name=SEPTIN14P23;ID=exon:HG00140_ch_T0001747:1;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1859737	1867277	.	-	.	source_transcript=ENST00000427373.6;source_transcript_name=SEPTIN14P23-201;source_gene=ENSG00000228786.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228786.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427373.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000427373.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;transcript_id=HG00140_ch_T0001747;gene_id=HG00140_ch_G0000643;Parent=HG00140_ch_T0001747;transcript_name=HG00140_ch_T0001747;gene_name=SEPTIN14P23;ID=intron:HG00140_ch_T0001747:1;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1867278	1867371	.	-	.	source_transcript=ENST00000427373.6;source_transcript_name=SEPTIN14P23-201;source_gene=ENSG00000228786.7;source_gene_biotype=lncRNA;original_gene_id=ENSG00000228786.7;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000427373.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000427373.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;transcript_id=HG00140_ch_T0001747;gene_id=HG00140_ch_G0000643;Parent=HG00140_ch_T0001747;transcript_name=HG00140_ch_T0001747;gene_name=SEPTIN14P23;ID=exon:HG00140_ch_T0001747:2;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	1861657	1864461	.	+	.	source_gene_common_name=CICP2;source_gene=ENSG00000233740.1;gene_id=HG00140_ch_G0000644;gene_biotype=processed_pseudogene;gene_name=CICP2;gene_sources=liftoff;ID=HG00140_ch_G0000644;Name=CICP2
HG00140_chrY_random0000005	CAT	transcript	1861657	1864461	1000	+	.	source_transcript=ENST00000420675.1;source_transcript_name=CICP2-201;source_gene=ENSG00000233740.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233740.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420675.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP2;transcript_id=HG00140_ch_T0001748;gene_id=HG00140_ch_G0000644;Parent=HG00140_ch_G0000644;transcript_name=HG00140_ch_T0001748;gene_name=CICP2;ID=HG00140_ch_T0001748;Name=CICP2
HG00140_chrY_random0000005	CAT	exon	1861657	1863436	.	+	.	source_transcript=ENST00000420675.1;source_transcript_name=CICP2-201;source_gene=ENSG00000233740.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233740.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420675.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP2;transcript_id=HG00140_ch_T0001748;gene_id=HG00140_ch_G0000644;Parent=HG00140_ch_T0001748;transcript_name=HG00140_ch_T0001748;gene_name=CICP2;ID=exon:HG00140_ch_T0001748:0;Name=CICP2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1863437	1863502	.	+	.	source_transcript=ENST00000420675.1;source_transcript_name=CICP2-201;source_gene=ENSG00000233740.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233740.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420675.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP2;transcript_id=HG00140_ch_T0001748;gene_id=HG00140_ch_G0000644;Parent=HG00140_ch_T0001748;transcript_name=HG00140_ch_T0001748;gene_name=CICP2;ID=intron:HG00140_ch_T0001748:0;Name=CICP2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1863503	1863924	.	+	.	source_transcript=ENST00000420675.1;source_transcript_name=CICP2-201;source_gene=ENSG00000233740.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233740.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420675.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP2;transcript_id=HG00140_ch_T0001748;gene_id=HG00140_ch_G0000644;Parent=HG00140_ch_T0001748;transcript_name=HG00140_ch_T0001748;gene_name=CICP2;ID=exon:HG00140_ch_T0001748:1;Name=CICP2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1863925	1864334	.	+	.	source_transcript=ENST00000420675.1;source_transcript_name=CICP2-201;source_gene=ENSG00000233740.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233740.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420675.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP2;transcript_id=HG00140_ch_T0001748;gene_id=HG00140_ch_G0000644;Parent=HG00140_ch_T0001748;transcript_name=HG00140_ch_T0001748;gene_name=CICP2;ID=intron:HG00140_ch_T0001748:1;Name=CICP2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1864335	1864461	.	+	.	source_transcript=ENST00000420675.1;source_transcript_name=CICP2-201;source_gene=ENSG00000233740.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233740.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000420675.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420675.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CICP2;transcript_id=HG00140_ch_T0001748;gene_id=HG00140_ch_G0000644;Parent=HG00140_ch_T0001748;transcript_name=HG00140_ch_T0001748;gene_name=CICP2;ID=exon:HG00140_ch_T0001748:2;Name=CICP2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	1865805	1866708	.	-	.	source_gene_common_name=LINC00265-3P;source_gene=ENSG00000233944.1;gene_id=HG00140_ch_G0000645;gene_biotype=processed_pseudogene;gene_name=LINC00265-3P;gene_sources=liftoff;ID=HG00140_ch_G0000645;Name=LINC00265-3P
HG00140_chrY_random0000005	CAT	transcript	1865805	1866708	1000	-	.	source_transcript=ENST00000447588.1;source_transcript_name=LINC00265-3P-201;source_gene=ENSG00000233944.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233944.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000447588.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447588.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00265-3P;transcript_id=HG00140_ch_T0001749;gene_id=HG00140_ch_G0000645;Parent=HG00140_ch_G0000645;transcript_name=HG00140_ch_T0001749;gene_name=LINC00265-3P;ID=HG00140_ch_T0001749;Name=LINC00265-3P
HG00140_chrY_random0000005	CAT	exon	1865805	1866708	.	-	.	source_transcript=ENST00000447588.1;source_transcript_name=LINC00265-3P-201;source_gene=ENSG00000233944.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000233944.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000447588.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447588.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00265-3P;transcript_id=HG00140_ch_T0001749;gene_id=HG00140_ch_G0000645;Parent=HG00140_ch_T0001749;transcript_name=HG00140_ch_T0001749;gene_name=LINC00265-3P;ID=exon:HG00140_ch_T0001749:0;Name=LINC00265-3P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	1903810	1909968	.	+	.	source_gene_common_name=UBE2Q2P4Y;source_gene=ENSG00000225491.1;gene_id=HG00140_ch_G0000646;gene_biotype=unprocessed_pseudogene;gene_name=UBE2Q2P4Y;gene_sources=liftoff;ID=HG00140_ch_G0000646;Name=UBE2Q2P4Y
HG00140_chrY_random0000005	CAT	transcript	1903810	1909968	1000	+	.	source_transcript=ENST00000433767.1;source_transcript_name=UBE2Q2P4Y-201;source_gene=ENSG00000225491.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225491.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433767.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UBE2Q2P4Y;transcript_id=HG00140_ch_T0001750;gene_id=HG00140_ch_G0000646;Parent=HG00140_ch_G0000646;transcript_name=HG00140_ch_T0001750;gene_name=UBE2Q2P4Y;ID=HG00140_ch_T0001750;Name=UBE2Q2P4Y
HG00140_chrY_random0000005	CAT	exon	1903810	1903911	.	+	.	source_transcript=ENST00000433767.1;source_transcript_name=UBE2Q2P4Y-201;source_gene=ENSG00000225491.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225491.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433767.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UBE2Q2P4Y;transcript_id=HG00140_ch_T0001750;gene_id=HG00140_ch_G0000646;Parent=HG00140_ch_T0001750;transcript_name=HG00140_ch_T0001750;gene_name=UBE2Q2P4Y;ID=exon:HG00140_ch_T0001750:0;Name=UBE2Q2P4Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1903912	1909863	.	+	.	source_transcript=ENST00000433767.1;source_transcript_name=UBE2Q2P4Y-201;source_gene=ENSG00000225491.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225491.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433767.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UBE2Q2P4Y;transcript_id=HG00140_ch_T0001750;gene_id=HG00140_ch_G0000646;Parent=HG00140_ch_T0001750;transcript_name=HG00140_ch_T0001750;gene_name=UBE2Q2P4Y;ID=intron:HG00140_ch_T0001750:0;Name=UBE2Q2P4Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1909864	1909968	.	+	.	source_transcript=ENST00000433767.1;source_transcript_name=UBE2Q2P4Y-201;source_gene=ENSG00000225491.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225491.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000433767.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000433767.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UBE2Q2P4Y;transcript_id=HG00140_ch_T0001750;gene_id=HG00140_ch_G0000646;Parent=HG00140_ch_T0001750;transcript_name=HG00140_ch_T0001750;gene_name=UBE2Q2P4Y;ID=exon:HG00140_ch_T0001750:1;Name=UBE2Q2P4Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	1927213	1933225	.	+	.	source_gene_common_name=GOLGA2P3Y;source_gene=ENSG00000172297.7;gene_id=HG00140_ch_G0000647;gene_biotype=unprocessed_pseudogene;gene_name=GOLGA2P3Y;gene_sources=liftoff;ID=HG00140_ch_G0000647;Name=GOLGA2P3Y
HG00140_chrY_random0000005	CAT	transcript	1927213	1933225	1000	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00140_ch_T0001751;gene_id=HG00140_ch_G0000647;Parent=HG00140_ch_G0000647;transcript_name=HG00140_ch_T0001751;gene_name=GOLGA2P3Y;ID=HG00140_ch_T0001751;Name=GOLGA2P3Y
HG00140_chrY_random0000005	CAT	exon	1927213	1927332	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00140_ch_T0001751;gene_id=HG00140_ch_G0000647;Parent=HG00140_ch_T0001751;transcript_name=HG00140_ch_T0001751;gene_name=GOLGA2P3Y;ID=exon:HG00140_ch_T0001751:0;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1927333	1927945	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00140_ch_T0001751;gene_id=HG00140_ch_G0000647;Parent=HG00140_ch_T0001751;transcript_name=HG00140_ch_T0001751;gene_name=GOLGA2P3Y;ID=intron:HG00140_ch_T0001751:0;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1927946	1928005	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00140_ch_T0001751;gene_id=HG00140_ch_G0000647;Parent=HG00140_ch_T0001751;transcript_name=HG00140_ch_T0001751;gene_name=GOLGA2P3Y;ID=exon:HG00140_ch_T0001751:1;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1928006	1928191	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00140_ch_T0001751;gene_id=HG00140_ch_G0000647;Parent=HG00140_ch_T0001751;transcript_name=HG00140_ch_T0001751;gene_name=GOLGA2P3Y;ID=intron:HG00140_ch_T0001751:1;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1928192	1928270	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00140_ch_T0001751;gene_id=HG00140_ch_G0000647;Parent=HG00140_ch_T0001751;transcript_name=HG00140_ch_T0001751;gene_name=GOLGA2P3Y;ID=exon:HG00140_ch_T0001751:2;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1928271	1929390	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00140_ch_T0001751;gene_id=HG00140_ch_G0000647;Parent=HG00140_ch_T0001751;transcript_name=HG00140_ch_T0001751;gene_name=GOLGA2P3Y;ID=intron:HG00140_ch_T0001751:2;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1929391	1929740	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00140_ch_T0001751;gene_id=HG00140_ch_G0000647;Parent=HG00140_ch_T0001751;transcript_name=HG00140_ch_T0001751;gene_name=GOLGA2P3Y;ID=exon:HG00140_ch_T0001751:3;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1929741	1930038	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00140_ch_T0001751;gene_id=HG00140_ch_G0000647;Parent=HG00140_ch_T0001751;transcript_name=HG00140_ch_T0001751;gene_name=GOLGA2P3Y;ID=intron:HG00140_ch_T0001751:3;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1930039	1930096	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00140_ch_T0001751;gene_id=HG00140_ch_G0000647;Parent=HG00140_ch_T0001751;transcript_name=HG00140_ch_T0001751;gene_name=GOLGA2P3Y;ID=exon:HG00140_ch_T0001751:4;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1930097	1931126	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00140_ch_T0001751;gene_id=HG00140_ch_G0000647;Parent=HG00140_ch_T0001751;transcript_name=HG00140_ch_T0001751;gene_name=GOLGA2P3Y;ID=intron:HG00140_ch_T0001751:4;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1931127	1931196	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00140_ch_T0001751;gene_id=HG00140_ch_G0000647;Parent=HG00140_ch_T0001751;transcript_name=HG00140_ch_T0001751;gene_name=GOLGA2P3Y;ID=exon:HG00140_ch_T0001751:5;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1931197	1931215	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00140_ch_T0001751;gene_id=HG00140_ch_G0000647;Parent=HG00140_ch_T0001751;transcript_name=HG00140_ch_T0001751;gene_name=GOLGA2P3Y;ID=intron:HG00140_ch_T0001751:5;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1931216	1931376	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00140_ch_T0001751;gene_id=HG00140_ch_G0000647;Parent=HG00140_ch_T0001751;transcript_name=HG00140_ch_T0001751;gene_name=GOLGA2P3Y;ID=exon:HG00140_ch_T0001751:6;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1931377	1931452	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00140_ch_T0001751;gene_id=HG00140_ch_G0000647;Parent=HG00140_ch_T0001751;transcript_name=HG00140_ch_T0001751;gene_name=GOLGA2P3Y;ID=intron:HG00140_ch_T0001751:6;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1931453	1931527	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00140_ch_T0001751;gene_id=HG00140_ch_G0000647;Parent=HG00140_ch_T0001751;transcript_name=HG00140_ch_T0001751;gene_name=GOLGA2P3Y;ID=exon:HG00140_ch_T0001751:7;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1931528	1931947	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00140_ch_T0001751;gene_id=HG00140_ch_G0000647;Parent=HG00140_ch_T0001751;transcript_name=HG00140_ch_T0001751;gene_name=GOLGA2P3Y;ID=intron:HG00140_ch_T0001751:7;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1931948	1932036	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00140_ch_T0001751;gene_id=HG00140_ch_G0000647;Parent=HG00140_ch_T0001751;transcript_name=HG00140_ch_T0001751;gene_name=GOLGA2P3Y;ID=exon:HG00140_ch_T0001751:8;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1932037	1932291	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00140_ch_T0001751;gene_id=HG00140_ch_G0000647;Parent=HG00140_ch_T0001751;transcript_name=HG00140_ch_T0001751;gene_name=GOLGA2P3Y;ID=intron:HG00140_ch_T0001751:8;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1932292	1932480	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00140_ch_T0001751;gene_id=HG00140_ch_G0000647;Parent=HG00140_ch_T0001751;transcript_name=HG00140_ch_T0001751;gene_name=GOLGA2P3Y;ID=exon:HG00140_ch_T0001751:9;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1932481	1932569	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00140_ch_T0001751;gene_id=HG00140_ch_G0000647;Parent=HG00140_ch_T0001751;transcript_name=HG00140_ch_T0001751;gene_name=GOLGA2P3Y;ID=intron:HG00140_ch_T0001751:9;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1932570	1932662	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00140_ch_T0001751;gene_id=HG00140_ch_G0000647;Parent=HG00140_ch_T0001751;transcript_name=HG00140_ch_T0001751;gene_name=GOLGA2P3Y;ID=exon:HG00140_ch_T0001751:10;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1932663	1932744	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00140_ch_T0001751;gene_id=HG00140_ch_G0000647;Parent=HG00140_ch_T0001751;transcript_name=HG00140_ch_T0001751;gene_name=GOLGA2P3Y;ID=intron:HG00140_ch_T0001751:10;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1932745	1932835	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00140_ch_T0001751;gene_id=HG00140_ch_G0000647;Parent=HG00140_ch_T0001751;transcript_name=HG00140_ch_T0001751;gene_name=GOLGA2P3Y;ID=exon:HG00140_ch_T0001751:11;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1932836	1932917	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00140_ch_T0001751;gene_id=HG00140_ch_G0000647;Parent=HG00140_ch_T0001751;transcript_name=HG00140_ch_T0001751;gene_name=GOLGA2P3Y;ID=intron:HG00140_ch_T0001751:11;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1932918	1933073	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00140_ch_T0001751;gene_id=HG00140_ch_G0000647;Parent=HG00140_ch_T0001751;transcript_name=HG00140_ch_T0001751;gene_name=GOLGA2P3Y;ID=exon:HG00140_ch_T0001751:12;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1933074	1933163	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00140_ch_T0001751;gene_id=HG00140_ch_G0000647;Parent=HG00140_ch_T0001751;transcript_name=HG00140_ch_T0001751;gene_name=GOLGA2P3Y;ID=intron:HG00140_ch_T0001751:12;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1933164	1933225	.	+	.	source_transcript=ENST00000416946.1;source_transcript_name=GOLGA2P3Y-201;source_gene=ENSG00000172297.7;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000172297.7;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000416946.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000416946.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;transcript_id=HG00140_ch_T0001751;gene_id=HG00140_ch_G0000647;Parent=HG00140_ch_T0001751;transcript_name=HG00140_ch_T0001751;gene_name=GOLGA2P3Y;ID=exon:HG00140_ch_T0001751:13;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	1931579	1931837	.	+	.	source_gene_common_name=RN7SL725P;source_gene=ENSG00000278242.1;gene_id=HG00140_ch_G0000648;gene_biotype=misc_RNA;gene_name=RN7SL725P;gene_sources=liftoff;ID=HG00140_ch_G0000648;Name=RN7SL725P
HG00140_chrY_random0000005	CAT	transcript	1931579	1931837	1000	+	.	source_transcript=ENST00000606439.2;source_transcript_name=RN7SL725P-201;source_gene=ENSG00000278242.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000278242.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000606439.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000606439.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RN7SL725P;transcript_id=HG00140_ch_T0001752;gene_id=HG00140_ch_G0000648;Parent=HG00140_ch_G0000648;transcript_name=HG00140_ch_T0001752;gene_name=RN7SL725P;ID=HG00140_ch_T0001752;Name=RN7SL725P
HG00140_chrY_random0000005	CAT	exon	1931579	1931837	.	+	.	source_transcript=ENST00000606439.2;source_transcript_name=RN7SL725P-201;source_gene=ENSG00000278242.1;source_gene_biotype=misc_RNA;original_gene_id=ENSG00000278242.1;gene_biotype=misc_RNA;transcript_biotype=misc_RNA;alignment_id=ENST00000606439.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000606439.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RN7SL725P;transcript_id=HG00140_ch_T0001752;gene_id=HG00140_ch_G0000648;Parent=HG00140_ch_T0001752;transcript_name=HG00140_ch_T0001752;gene_name=RN7SL725P;ID=exon:HG00140_ch_T0001752:0;Name=RN7SL725P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	1936663	1946277	.	+	.	source_gene_common_name=ENSG00000284071;source_gene=ENSG00000284071.1;gene_id=HG00140_ch_G0000649;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000284071;gene_sources=liftoff;ID=HG00140_ch_G0000649;Name=ENSG00000284071
HG00140_chrY_random0000005	CAT	transcript	1936663	1946277	1000	+	.	source_transcript=ENST00000624333.2;source_transcript_name=ENST00000624333;source_gene=ENSG00000284071.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284071.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000624333.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000624333.2;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284071;transcript_id=HG00140_ch_T0001753;gene_id=HG00140_ch_G0000649;Parent=HG00140_ch_G0000649;transcript_name=HG00140_ch_T0001753;gene_name=ENSG00000284071;ID=HG00140_ch_T0001753;Name=ENSG00000284071
HG00140_chrY_random0000005	CAT	exon	1936663	1936747	.	+	.	source_transcript=ENST00000624333.2;source_transcript_name=ENST00000624333;source_gene=ENSG00000284071.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284071.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000624333.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000624333.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284071;transcript_id=HG00140_ch_T0001753;gene_id=HG00140_ch_G0000649;Parent=HG00140_ch_T0001753;transcript_name=HG00140_ch_T0001753;gene_name=ENSG00000284071;ID=exon:HG00140_ch_T0001753:0;Name=ENSG00000284071;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1936748	1938168	.	+	.	source_transcript=ENST00000624333.2;source_transcript_name=ENST00000624333;source_gene=ENSG00000284071.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284071.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000624333.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000624333.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284071;transcript_id=HG00140_ch_T0001753;gene_id=HG00140_ch_G0000649;Parent=HG00140_ch_T0001753;transcript_name=HG00140_ch_T0001753;gene_name=ENSG00000284071;ID=intron:HG00140_ch_T0001753:0;Name=ENSG00000284071;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1938169	1938318	.	+	.	source_transcript=ENST00000624333.2;source_transcript_name=ENST00000624333;source_gene=ENSG00000284071.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284071.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000624333.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000624333.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284071;transcript_id=HG00140_ch_T0001753;gene_id=HG00140_ch_G0000649;Parent=HG00140_ch_T0001753;transcript_name=HG00140_ch_T0001753;gene_name=ENSG00000284071;ID=exon:HG00140_ch_T0001753:1;Name=ENSG00000284071;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1938319	1946115	.	+	.	source_transcript=ENST00000624333.2;source_transcript_name=ENST00000624333;source_gene=ENSG00000284071.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284071.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000624333.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000624333.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284071;transcript_id=HG00140_ch_T0001753;gene_id=HG00140_ch_G0000649;Parent=HG00140_ch_T0001753;transcript_name=HG00140_ch_T0001753;gene_name=ENSG00000284071;ID=intron:HG00140_ch_T0001753:1;Name=ENSG00000284071;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1946116	1946277	.	+	.	source_transcript=ENST00000624333.2;source_transcript_name=ENST00000624333;source_gene=ENSG00000284071.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000284071.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000624333.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000624333.2;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000284071;transcript_id=HG00140_ch_T0001753;gene_id=HG00140_ch_G0000649;Parent=HG00140_ch_T0001753;transcript_name=HG00140_ch_T0001753;gene_name=ENSG00000284071;ID=exon:HG00140_ch_T0001753:2;Name=ENSG00000284071;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	1936755	1953301	.	+	.	source_gene_common_name=ENSG00000296017;source_gene=ENSG00000296017.1;gene_id=HG00140_ch_G0000650;gene_biotype=lncRNA;gene_name=ENSG00000296017;gene_sources=liftoff;ID=HG00140_ch_G0000650;Name=ENSG00000296017
HG00140_chrY_random0000005	CAT	transcript	1936755	1946336	1000	+	.	source_transcript=ENST00000735436.1;source_transcript_name=ENST00000735436;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735436.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=HG00140_ch_T0001754;gene_id=HG00140_ch_G0000650;Parent=HG00140_ch_G0000650;transcript_name=HG00140_ch_T0001754;gene_name=ENSG00000296017;ID=HG00140_ch_T0001754;Name=ENSG00000296017
HG00140_chrY_random0000005	CAT	exon	1936755	1937122	.	+	.	source_transcript=ENST00000735436.1;source_transcript_name=ENST00000735436;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=HG00140_ch_T0001754;gene_id=HG00140_ch_G0000650;Parent=HG00140_ch_T0001754;transcript_name=HG00140_ch_T0001754;gene_name=ENSG00000296017;ID=exon:HG00140_ch_T0001754:0;Name=ENSG00000296017;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1937123	1938168	.	+	.	source_transcript=ENST00000735436.1;source_transcript_name=ENST00000735436;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=HG00140_ch_T0001754;gene_id=HG00140_ch_G0000650;Parent=HG00140_ch_T0001754;transcript_name=HG00140_ch_T0001754;gene_name=ENSG00000296017;ID=intron:HG00140_ch_T0001754:0;Name=ENSG00000296017;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1938169	1938318	.	+	.	source_transcript=ENST00000735436.1;source_transcript_name=ENST00000735436;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=HG00140_ch_T0001754;gene_id=HG00140_ch_G0000650;Parent=HG00140_ch_T0001754;transcript_name=HG00140_ch_T0001754;gene_name=ENSG00000296017;ID=exon:HG00140_ch_T0001754:1;Name=ENSG00000296017;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1938319	1946115	.	+	.	source_transcript=ENST00000735436.1;source_transcript_name=ENST00000735436;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=HG00140_ch_T0001754;gene_id=HG00140_ch_G0000650;Parent=HG00140_ch_T0001754;transcript_name=HG00140_ch_T0001754;gene_name=ENSG00000296017;ID=intron:HG00140_ch_T0001754:1;Name=ENSG00000296017;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1946116	1946336	.	+	.	source_transcript=ENST00000735436.1;source_transcript_name=ENST00000735436;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=HG00140_ch_T0001754;gene_id=HG00140_ch_G0000650;Parent=HG00140_ch_T0001754;transcript_name=HG00140_ch_T0001754;gene_name=ENSG00000296017;ID=exon:HG00140_ch_T0001754:2;Name=ENSG00000296017;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	1936756	1953301	1000	+	.	source_transcript=ENST00000735435.1;source_transcript_name=ENST00000735435;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735435.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;alternative_source_transcripts=ENST00000735435.1,ENST00000735435.1;transcript_id=HG00140_ch_T0001755;gene_id=HG00140_ch_G0000650;Parent=HG00140_ch_G0000650;transcript_name=HG00140_ch_T0001755;gene_name=ENSG00000296017;ID=HG00140_ch_T0001755;Name=ENSG00000296017
HG00140_chrY_random0000005	CAT	exon	1936756	1937122	.	+	.	source_transcript=ENST00000735435.1;source_transcript_name=ENST00000735435;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735435.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;alternative_source_transcripts=ENST00000735435.1,ENST00000735435.1;transcript_id=HG00140_ch_T0001755;gene_id=HG00140_ch_G0000650;Parent=HG00140_ch_T0001755;transcript_name=HG00140_ch_T0001755;gene_name=ENSG00000296017;ID=exon:HG00140_ch_T0001755:0;Name=ENSG00000296017;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1937123	1938139	.	+	.	source_transcript=ENST00000735435.1;source_transcript_name=ENST00000735435;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735435.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;alternative_source_transcripts=ENST00000735435.1,ENST00000735435.1;transcript_id=HG00140_ch_T0001755;gene_id=HG00140_ch_G0000650;Parent=HG00140_ch_T0001755;transcript_name=HG00140_ch_T0001755;gene_name=ENSG00000296017;ID=intron:HG00140_ch_T0001755:0;Name=ENSG00000296017;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1938140	1938318	.	+	.	source_transcript=ENST00000735435.1;source_transcript_name=ENST00000735435;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735435.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;alternative_source_transcripts=ENST00000735435.1,ENST00000735435.1;transcript_id=HG00140_ch_T0001755;gene_id=HG00140_ch_G0000650;Parent=HG00140_ch_T0001755;transcript_name=HG00140_ch_T0001755;gene_name=ENSG00000296017;ID=exon:HG00140_ch_T0001755:1;Name=ENSG00000296017;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1938319	1946115	.	+	.	source_transcript=ENST00000735435.1;source_transcript_name=ENST00000735435;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735435.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;alternative_source_transcripts=ENST00000735435.1,ENST00000735435.1;transcript_id=HG00140_ch_T0001755;gene_id=HG00140_ch_G0000650;Parent=HG00140_ch_T0001755;transcript_name=HG00140_ch_T0001755;gene_name=ENSG00000296017;ID=intron:HG00140_ch_T0001755:1;Name=ENSG00000296017;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1946116	1946220	.	+	.	source_transcript=ENST00000735435.1;source_transcript_name=ENST00000735435;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735435.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;alternative_source_transcripts=ENST00000735435.1,ENST00000735435.1;transcript_id=HG00140_ch_T0001755;gene_id=HG00140_ch_G0000650;Parent=HG00140_ch_T0001755;transcript_name=HG00140_ch_T0001755;gene_name=ENSG00000296017;ID=exon:HG00140_ch_T0001755:2;Name=ENSG00000296017;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1946221	1950924	.	+	.	source_transcript=ENST00000735435.1;source_transcript_name=ENST00000735435;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735435.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;alternative_source_transcripts=ENST00000735435.1,ENST00000735435.1;transcript_id=HG00140_ch_T0001755;gene_id=HG00140_ch_G0000650;Parent=HG00140_ch_T0001755;transcript_name=HG00140_ch_T0001755;gene_name=ENSG00000296017;ID=intron:HG00140_ch_T0001755:2;Name=ENSG00000296017;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1950925	1951088	.	+	.	source_transcript=ENST00000735435.1;source_transcript_name=ENST00000735435;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735435.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;alternative_source_transcripts=ENST00000735435.1,ENST00000735435.1;transcript_id=HG00140_ch_T0001755;gene_id=HG00140_ch_G0000650;Parent=HG00140_ch_T0001755;transcript_name=HG00140_ch_T0001755;gene_name=ENSG00000296017;ID=exon:HG00140_ch_T0001755:3;Name=ENSG00000296017;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1951089	1952726	.	+	.	source_transcript=ENST00000735435.1;source_transcript_name=ENST00000735435;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735435.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;alternative_source_transcripts=ENST00000735435.1,ENST00000735435.1;transcript_id=HG00140_ch_T0001755;gene_id=HG00140_ch_G0000650;Parent=HG00140_ch_T0001755;transcript_name=HG00140_ch_T0001755;gene_name=ENSG00000296017;ID=intron:HG00140_ch_T0001755:3;Name=ENSG00000296017;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1952727	1953301	.	+	.	source_transcript=ENST00000735435.1;source_transcript_name=ENST00000735435;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735435.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;alternative_source_transcripts=ENST00000735435.1,ENST00000735435.1;transcript_id=HG00140_ch_T0001755;gene_id=HG00140_ch_G0000650;Parent=HG00140_ch_T0001755;transcript_name=HG00140_ch_T0001755;gene_name=ENSG00000296017;ID=exon:HG00140_ch_T0001755:4;Name=ENSG00000296017;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	1936910	1946336	1000	+	.	source_transcript=ENST00000735437.1;source_transcript_name=ENST00000735437;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735437.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=HG00140_ch_T0001756;gene_id=HG00140_ch_G0000650;Parent=HG00140_ch_G0000650;transcript_name=HG00140_ch_T0001756;gene_name=ENSG00000296017;ID=HG00140_ch_T0001756;Name=ENSG00000296017
HG00140_chrY_random0000005	CAT	exon	1936910	1937122	.	+	.	source_transcript=ENST00000735437.1;source_transcript_name=ENST00000735437;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=HG00140_ch_T0001756;gene_id=HG00140_ch_G0000650;Parent=HG00140_ch_T0001756;transcript_name=HG00140_ch_T0001756;gene_name=ENSG00000296017;ID=exon:HG00140_ch_T0001756:0;Name=ENSG00000296017;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1937123	1938139	.	+	.	source_transcript=ENST00000735437.1;source_transcript_name=ENST00000735437;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=HG00140_ch_T0001756;gene_id=HG00140_ch_G0000650;Parent=HG00140_ch_T0001756;transcript_name=HG00140_ch_T0001756;gene_name=ENSG00000296017;ID=intron:HG00140_ch_T0001756:0;Name=ENSG00000296017;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1938140	1938318	.	+	.	source_transcript=ENST00000735437.1;source_transcript_name=ENST00000735437;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=HG00140_ch_T0001756;gene_id=HG00140_ch_G0000650;Parent=HG00140_ch_T0001756;transcript_name=HG00140_ch_T0001756;gene_name=ENSG00000296017;ID=exon:HG00140_ch_T0001756:1;Name=ENSG00000296017;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1938319	1946115	.	+	.	source_transcript=ENST00000735437.1;source_transcript_name=ENST00000735437;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=HG00140_ch_T0001756;gene_id=HG00140_ch_G0000650;Parent=HG00140_ch_T0001756;transcript_name=HG00140_ch_T0001756;gene_name=ENSG00000296017;ID=intron:HG00140_ch_T0001756:1;Name=ENSG00000296017;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1946116	1946336	.	+	.	source_transcript=ENST00000735437.1;source_transcript_name=ENST00000735437;source_gene=ENSG00000296017.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000296017.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000735437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000735437.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000296017;transcript_id=HG00140_ch_T0001756;gene_id=HG00140_ch_G0000650;Parent=HG00140_ch_T0001756;transcript_name=HG00140_ch_T0001756;gene_name=ENSG00000296017;ID=exon:HG00140_ch_T0001756:2;Name=ENSG00000296017;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	1950925	1956286	.	+	.	source_gene_common_name=CSPG4P3Y;source_gene=ENSG00000172342.5;gene_id=HG00140_ch_G0000651;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=CSPG4P3Y;gene_sources=liftoff;ID=HG00140_ch_G0000651;Name=CSPG4P3Y
HG00140_chrY_random0000005	CAT	transcript	1950925	1956286	1000	+	.	source_transcript=ENST00000418188.1;source_transcript_name=CSPG4P3Y-201;source_gene=ENSG00000172342.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000172342.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418188.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P3Y;transcript_id=HG00140_ch_T0001757;gene_id=HG00140_ch_G0000651;Parent=HG00140_ch_G0000651;transcript_name=HG00140_ch_T0001757;gene_name=CSPG4P3Y;ID=HG00140_ch_T0001757;Name=CSPG4P3Y
HG00140_chrY_random0000005	CAT	exon	1950925	1951088	.	+	.	source_transcript=ENST00000418188.1;source_transcript_name=CSPG4P3Y-201;source_gene=ENSG00000172342.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000172342.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P3Y;transcript_id=HG00140_ch_T0001757;gene_id=HG00140_ch_G0000651;Parent=HG00140_ch_T0001757;transcript_name=HG00140_ch_T0001757;gene_name=CSPG4P3Y;ID=exon:HG00140_ch_T0001757:0;Name=CSPG4P3Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1951089	1952726	.	+	.	source_transcript=ENST00000418188.1;source_transcript_name=CSPG4P3Y-201;source_gene=ENSG00000172342.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000172342.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P3Y;transcript_id=HG00140_ch_T0001757;gene_id=HG00140_ch_G0000651;Parent=HG00140_ch_T0001757;transcript_name=HG00140_ch_T0001757;gene_name=CSPG4P3Y;ID=intron:HG00140_ch_T0001757:0;Name=CSPG4P3Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1952727	1956286	.	+	.	source_transcript=ENST00000418188.1;source_transcript_name=CSPG4P3Y-201;source_gene=ENSG00000172342.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000172342.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000418188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P3Y;transcript_id=HG00140_ch_T0001757;gene_id=HG00140_ch_G0000651;Parent=HG00140_ch_T0001757;transcript_name=HG00140_ch_T0001757;gene_name=CSPG4P3Y;ID=exon:HG00140_ch_T0001757:1;Name=CSPG4P3Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	1955564	1959361	.	+	.	source_gene_common_name=CSPG4P2Y;source_gene=ENSG00000244231.1;gene_id=HG00140_ch_G0000652;gene_biotype=lncRNA;gene_name=CSPG4P2Y;gene_sources=liftoff;ID=HG00140_ch_G0000652;Name=CSPG4P2Y
HG00140_chrY_random0000005	CAT	transcript	1955564	1959361	1000	+	.	source_transcript=ENST00000306853.1;source_transcript_name=CSPG4P2Y-201;source_gene=ENSG00000244231.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000244231.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000306853.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000306853.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P2Y;transcript_id=HG00140_ch_T0001758;gene_id=HG00140_ch_G0000652;Parent=HG00140_ch_G0000652;transcript_name=HG00140_ch_T0001758;gene_name=CSPG4P2Y;ID=HG00140_ch_T0001758;Name=CSPG4P2Y
HG00140_chrY_random0000005	CAT	exon	1955564	1956286	.	+	.	source_transcript=ENST00000306853.1;source_transcript_name=CSPG4P2Y-201;source_gene=ENSG00000244231.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000244231.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000306853.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000306853.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P2Y;transcript_id=HG00140_ch_T0001758;gene_id=HG00140_ch_G0000652;Parent=HG00140_ch_T0001758;transcript_name=HG00140_ch_T0001758;gene_name=CSPG4P2Y;ID=exon:HG00140_ch_T0001758:0;Name=CSPG4P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1956287	1959289	.	+	.	source_transcript=ENST00000306853.1;source_transcript_name=CSPG4P2Y-201;source_gene=ENSG00000244231.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000244231.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000306853.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000306853.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P2Y;transcript_id=HG00140_ch_T0001758;gene_id=HG00140_ch_G0000652;Parent=HG00140_ch_T0001758;transcript_name=HG00140_ch_T0001758;gene_name=CSPG4P2Y;ID=intron:HG00140_ch_T0001758:0;Name=CSPG4P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1959290	1959361	.	+	.	source_transcript=ENST00000306853.1;source_transcript_name=CSPG4P2Y-201;source_gene=ENSG00000244231.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000244231.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000306853.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000306853.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P2Y;transcript_id=HG00140_ch_T0001758;gene_id=HG00140_ch_G0000652;Parent=HG00140_ch_T0001758;transcript_name=HG00140_ch_T0001758;gene_name=CSPG4P2Y;ID=exon:HG00140_ch_T0001758:1;Name=CSPG4P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	1959290	1963479	.	+	.	source_gene_common_name=DNM1P24;source_gene=ENSG00000242854.1;gene_id=HG00140_ch_G0000653;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=DNM1P24;gene_sources=liftoff;ID=HG00140_ch_G0000653;Name=DNM1P24
HG00140_chrY_random0000005	CAT	transcript	1959290	1963479	1000	+	.	source_transcript=ENST00000441091.1;source_transcript_name=DNM1P24-201;source_gene=ENSG00000242854.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242854.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441091.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441091.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DNM1P24;transcript_id=HG00140_ch_T0001759;gene_id=HG00140_ch_G0000653;Parent=HG00140_ch_G0000653;transcript_name=HG00140_ch_T0001759;gene_name=DNM1P24;ID=HG00140_ch_T0001759;Name=DNM1P24
HG00140_chrY_random0000005	CAT	exon	1959290	1959521	.	+	.	source_transcript=ENST00000441091.1;source_transcript_name=DNM1P24-201;source_gene=ENSG00000242854.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242854.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441091.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441091.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DNM1P24;transcript_id=HG00140_ch_T0001759;gene_id=HG00140_ch_G0000653;Parent=HG00140_ch_T0001759;transcript_name=HG00140_ch_T0001759;gene_name=DNM1P24;ID=exon:HG00140_ch_T0001759:0;Name=DNM1P24;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1959522	1959772	.	+	.	source_transcript=ENST00000441091.1;source_transcript_name=DNM1P24-201;source_gene=ENSG00000242854.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242854.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441091.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441091.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DNM1P24;transcript_id=HG00140_ch_T0001759;gene_id=HG00140_ch_G0000653;Parent=HG00140_ch_T0001759;transcript_name=HG00140_ch_T0001759;gene_name=DNM1P24;ID=intron:HG00140_ch_T0001759:0;Name=DNM1P24;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1959773	1959977	.	+	.	source_transcript=ENST00000441091.1;source_transcript_name=DNM1P24-201;source_gene=ENSG00000242854.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242854.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441091.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441091.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DNM1P24;transcript_id=HG00140_ch_T0001759;gene_id=HG00140_ch_G0000653;Parent=HG00140_ch_T0001759;transcript_name=HG00140_ch_T0001759;gene_name=DNM1P24;ID=exon:HG00140_ch_T0001759:1;Name=DNM1P24;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1959978	1963426	.	+	.	source_transcript=ENST00000441091.1;source_transcript_name=DNM1P24-201;source_gene=ENSG00000242854.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242854.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441091.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441091.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DNM1P24;transcript_id=HG00140_ch_T0001759;gene_id=HG00140_ch_G0000653;Parent=HG00140_ch_T0001759;transcript_name=HG00140_ch_T0001759;gene_name=DNM1P24;ID=intron:HG00140_ch_T0001759:1;Name=DNM1P24;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1963427	1963479	.	+	.	source_transcript=ENST00000441091.1;source_transcript_name=DNM1P24-201;source_gene=ENSG00000242854.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000242854.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000441091.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000441091.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DNM1P24;transcript_id=HG00140_ch_T0001759;gene_id=HG00140_ch_G0000653;Parent=HG00140_ch_T0001759;transcript_name=HG00140_ch_T0001759;gene_name=DNM1P24;ID=exon:HG00140_ch_T0001759:2;Name=DNM1P24;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	1959724	1960318	.	-	.	source_gene_common_name=ENSG00000230977;source_gene=ENSG00000230977.1;gene_id=HG00140_ch_G0000654;gene_biotype=unprocessed_pseudogene;gene_name=ENSG00000230977;gene_sources=liftoff;ID=HG00140_ch_G0000654;Name=ENSG00000230977
HG00140_chrY_random0000005	CAT	transcript	1959724	1960318	1000	-	.	source_transcript=ENST00000418278.1;source_transcript_name=ENST00000418278;source_gene=ENSG00000230977.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230977.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418278.1;transcript_score=199.832;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230977;transcript_id=HG00140_ch_T0001760;gene_id=HG00140_ch_G0000654;Parent=HG00140_ch_G0000654;transcript_name=HG00140_ch_T0001760;gene_name=ENSG00000230977;ID=HG00140_ch_T0001760;Name=ENSG00000230977
HG00140_chrY_random0000005	CAT	exon	1959724	1960318	.	-	.	source_transcript=ENST00000418278.1;source_transcript_name=ENST00000418278;source_gene=ENSG00000230977.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230977.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418278.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418278.1;transcript_score=199.832;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000230977;transcript_id=HG00140_ch_T0001760;gene_id=HG00140_ch_G0000654;Parent=HG00140_ch_T0001760;transcript_name=HG00140_ch_T0001760;gene_name=ENSG00000230977;ID=exon:HG00140_ch_T0001760:0;Name=ENSG00000230977;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	1966364	1971166	.	-	.	source_gene_common_name=ENSG00000297966;source_gene=ENSG00000297966.1;gene_id=HG00140_ch_G0000655;gene_biotype=lncRNA;gene_name=ENSG00000297966;gene_sources=liftoff;ID=HG00140_ch_G0000655;Name=ENSG00000297966
HG00140_chrY_random0000005	CAT	transcript	1966364	1970735	1000	-	.	source_transcript=ENST00000752181.1;source_transcript_name=ENST00000752181;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752181.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001761;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_G0000655;transcript_name=HG00140_ch_T0001761;gene_name=ENSG00000297966;ID=HG00140_ch_T0001761;Name=ENSG00000297966
HG00140_chrY_random0000005	CAT	exon	1966364	1968435	.	-	.	source_transcript=ENST00000752181.1;source_transcript_name=ENST00000752181;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001761;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001761;transcript_name=HG00140_ch_T0001761;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001761:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1968436	1968644	.	-	.	source_transcript=ENST00000752181.1;source_transcript_name=ENST00000752181;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001761;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001761;transcript_name=HG00140_ch_T0001761;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001761:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1968645	1968759	.	-	.	source_transcript=ENST00000752181.1;source_transcript_name=ENST00000752181;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001761;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001761;transcript_name=HG00140_ch_T0001761;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001761:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1968760	1969799	.	-	.	source_transcript=ENST00000752181.1;source_transcript_name=ENST00000752181;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001761;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001761;transcript_name=HG00140_ch_T0001761;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001761:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1969800	1969860	.	-	.	source_transcript=ENST00000752181.1;source_transcript_name=ENST00000752181;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001761;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001761;transcript_name=HG00140_ch_T0001761;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001761:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1969861	1970127	.	-	.	source_transcript=ENST00000752181.1;source_transcript_name=ENST00000752181;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001761;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001761;transcript_name=HG00140_ch_T0001761;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001761:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1970128	1970735	.	-	.	source_transcript=ENST00000752181.1;source_transcript_name=ENST00000752181;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752181.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001761;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001761;transcript_name=HG00140_ch_T0001761;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001761:3;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	1968271	1970609	1000	-	.	source_transcript=ENST00000752184.1;source_transcript_name=ENST00000752184;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752184.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001762;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_G0000655;transcript_name=HG00140_ch_T0001762;gene_name=ENSG00000297966;ID=HG00140_ch_T0001762;Name=ENSG00000297966
HG00140_chrY_random0000005	CAT	exon	1968271	1968435	.	-	.	source_transcript=ENST00000752184.1;source_transcript_name=ENST00000752184;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752184.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001762;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001762;transcript_name=HG00140_ch_T0001762;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001762:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1968436	1968644	.	-	.	source_transcript=ENST00000752184.1;source_transcript_name=ENST00000752184;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752184.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001762;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001762;transcript_name=HG00140_ch_T0001762;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001762:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1968645	1968759	.	-	.	source_transcript=ENST00000752184.1;source_transcript_name=ENST00000752184;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752184.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001762;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001762;transcript_name=HG00140_ch_T0001762;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001762:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1968760	1969621	.	-	.	source_transcript=ENST00000752184.1;source_transcript_name=ENST00000752184;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752184.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001762;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001762;transcript_name=HG00140_ch_T0001762;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001762:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1969622	1969860	.	-	.	source_transcript=ENST00000752184.1;source_transcript_name=ENST00000752184;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752184.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001762;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001762;transcript_name=HG00140_ch_T0001762;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001762:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1969861	1970298	.	-	.	source_transcript=ENST00000752184.1;source_transcript_name=ENST00000752184;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752184.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001762;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001762;transcript_name=HG00140_ch_T0001762;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001762:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1970299	1970609	.	-	.	source_transcript=ENST00000752184.1;source_transcript_name=ENST00000752184;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752184.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752184.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001762;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001762;transcript_name=HG00140_ch_T0001762;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001762:3;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	1968271	1970422	1000	-	.	source_transcript=ENST00000752190.1;source_transcript_name=ENST00000752190;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752190.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001763;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_G0000655;transcript_name=HG00140_ch_T0001763;gene_name=ENSG00000297966;ID=HG00140_ch_T0001763;Name=ENSG00000297966
HG00140_chrY_random0000005	CAT	exon	1968271	1968435	.	-	.	source_transcript=ENST00000752190.1;source_transcript_name=ENST00000752190;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001763;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001763;transcript_name=HG00140_ch_T0001763;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001763:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1968436	1968644	.	-	.	source_transcript=ENST00000752190.1;source_transcript_name=ENST00000752190;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001763;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001763;transcript_name=HG00140_ch_T0001763;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001763:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1968645	1968759	.	-	.	source_transcript=ENST00000752190.1;source_transcript_name=ENST00000752190;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001763;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001763;transcript_name=HG00140_ch_T0001763;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001763:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1968760	1969782	.	-	.	source_transcript=ENST00000752190.1;source_transcript_name=ENST00000752190;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001763;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001763;transcript_name=HG00140_ch_T0001763;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001763:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1969783	1969860	.	-	.	source_transcript=ENST00000752190.1;source_transcript_name=ENST00000752190;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001763;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001763;transcript_name=HG00140_ch_T0001763;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001763:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1969861	1970298	.	-	.	source_transcript=ENST00000752190.1;source_transcript_name=ENST00000752190;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001763;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001763;transcript_name=HG00140_ch_T0001763;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001763:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1970299	1970422	.	-	.	source_transcript=ENST00000752190.1;source_transcript_name=ENST00000752190;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001763;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001763;transcript_name=HG00140_ch_T0001763;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001763:3;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	1968271	1971166	1000	-	.	source_transcript=ENST00000752182.1;source_transcript_name=ENST00000752182;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752182.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;alternative_source_transcripts=ENST00000825427.1;transcript_id=HG00140_ch_T0001764;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_G0000655;transcript_name=HG00140_ch_T0001764;gene_name=ENSG00000297966;ID=HG00140_ch_T0001764;Name=ENSG00000297966
HG00140_chrY_random0000005	CAT	exon	1968271	1968435	.	-	.	source_transcript=ENST00000752182.1;source_transcript_name=ENST00000752182;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752182.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;alternative_source_transcripts=ENST00000825427.1;transcript_id=HG00140_ch_T0001764;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001764;transcript_name=HG00140_ch_T0001764;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001764:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1968436	1968644	.	-	.	source_transcript=ENST00000752182.1;source_transcript_name=ENST00000752182;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752182.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;alternative_source_transcripts=ENST00000825427.1;transcript_id=HG00140_ch_T0001764;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001764;transcript_name=HG00140_ch_T0001764;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001764:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1968645	1968759	.	-	.	source_transcript=ENST00000752182.1;source_transcript_name=ENST00000752182;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752182.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;alternative_source_transcripts=ENST00000825427.1;transcript_id=HG00140_ch_T0001764;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001764;transcript_name=HG00140_ch_T0001764;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001764:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1968760	1969621	.	-	.	source_transcript=ENST00000752182.1;source_transcript_name=ENST00000752182;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752182.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;alternative_source_transcripts=ENST00000825427.1;transcript_id=HG00140_ch_T0001764;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001764;transcript_name=HG00140_ch_T0001764;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001764:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1969622	1969860	.	-	.	source_transcript=ENST00000752182.1;source_transcript_name=ENST00000752182;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752182.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;alternative_source_transcripts=ENST00000825427.1;transcript_id=HG00140_ch_T0001764;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001764;transcript_name=HG00140_ch_T0001764;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001764:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1969861	1971085	.	-	.	source_transcript=ENST00000752182.1;source_transcript_name=ENST00000752182;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752182.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;alternative_source_transcripts=ENST00000825427.1;transcript_id=HG00140_ch_T0001764;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001764;transcript_name=HG00140_ch_T0001764;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001764:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1971086	1971166	.	-	.	source_transcript=ENST00000752182.1;source_transcript_name=ENST00000752182;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752182.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752182.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;alternative_source_transcripts=ENST00000825427.1;transcript_id=HG00140_ch_T0001764;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001764;transcript_name=HG00140_ch_T0001764;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001764:3;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	1968271	1970609	1000	-	.	source_transcript=ENST00000752185.1;source_transcript_name=ENST00000752185;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752185.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001765;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_G0000655;transcript_name=HG00140_ch_T0001765;gene_name=ENSG00000297966;ID=HG00140_ch_T0001765;Name=ENSG00000297966
HG00140_chrY_random0000005	CAT	exon	1968271	1968435	.	-	.	source_transcript=ENST00000752185.1;source_transcript_name=ENST00000752185;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752185.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001765;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001765;transcript_name=HG00140_ch_T0001765;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001765:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1968436	1968644	.	-	.	source_transcript=ENST00000752185.1;source_transcript_name=ENST00000752185;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752185.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001765;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001765;transcript_name=HG00140_ch_T0001765;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001765:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1968645	1968759	.	-	.	source_transcript=ENST00000752185.1;source_transcript_name=ENST00000752185;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752185.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001765;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001765;transcript_name=HG00140_ch_T0001765;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001765:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1968760	1969782	.	-	.	source_transcript=ENST00000752185.1;source_transcript_name=ENST00000752185;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752185.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001765;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001765;transcript_name=HG00140_ch_T0001765;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001765:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1969783	1969860	.	-	.	source_transcript=ENST00000752185.1;source_transcript_name=ENST00000752185;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752185.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001765;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001765;transcript_name=HG00140_ch_T0001765;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001765:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1969861	1970127	.	-	.	source_transcript=ENST00000752185.1;source_transcript_name=ENST00000752185;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752185.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001765;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001765;transcript_name=HG00140_ch_T0001765;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001765:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1970128	1970609	.	-	.	source_transcript=ENST00000752185.1;source_transcript_name=ENST00000752185;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752185.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752185.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001765;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001765;transcript_name=HG00140_ch_T0001765;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001765:3;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	1968271	1970541	1000	-	.	source_transcript=ENST00000752188.1;source_transcript_name=ENST00000752188;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752188.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001766;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_G0000655;transcript_name=HG00140_ch_T0001766;gene_name=ENSG00000297966;ID=HG00140_ch_T0001766;Name=ENSG00000297966
HG00140_chrY_random0000005	CAT	exon	1968271	1968435	.	-	.	source_transcript=ENST00000752188.1;source_transcript_name=ENST00000752188;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001766;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001766;transcript_name=HG00140_ch_T0001766;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001766:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1968436	1968644	.	-	.	source_transcript=ENST00000752188.1;source_transcript_name=ENST00000752188;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001766;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001766;transcript_name=HG00140_ch_T0001766;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001766:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1968645	1968759	.	-	.	source_transcript=ENST00000752188.1;source_transcript_name=ENST00000752188;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001766;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001766;transcript_name=HG00140_ch_T0001766;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001766:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1968760	1969799	.	-	.	source_transcript=ENST00000752188.1;source_transcript_name=ENST00000752188;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001766;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001766;transcript_name=HG00140_ch_T0001766;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001766:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1969800	1969860	.	-	.	source_transcript=ENST00000752188.1;source_transcript_name=ENST00000752188;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001766;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001766;transcript_name=HG00140_ch_T0001766;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001766:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1969861	1970298	.	-	.	source_transcript=ENST00000752188.1;source_transcript_name=ENST00000752188;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001766;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001766;transcript_name=HG00140_ch_T0001766;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001766:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1970299	1970541	.	-	.	source_transcript=ENST00000752188.1;source_transcript_name=ENST00000752188;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752188.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752188.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001766;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001766;transcript_name=HG00140_ch_T0001766;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001766:3;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	1968271	1969958	1000	-	.	source_transcript=ENST00000752199.1;source_transcript_name=ENST00000752199;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752199.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001767;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_G0000655;transcript_name=HG00140_ch_T0001767;gene_name=ENSG00000297966;ID=HG00140_ch_T0001767;Name=ENSG00000297966
HG00140_chrY_random0000005	CAT	exon	1968271	1968435	.	-	.	source_transcript=ENST00000752199.1;source_transcript_name=ENST00000752199;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752199.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001767;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001767;transcript_name=HG00140_ch_T0001767;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001767:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1968436	1968644	.	-	.	source_transcript=ENST00000752199.1;source_transcript_name=ENST00000752199;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752199.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001767;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001767;transcript_name=HG00140_ch_T0001767;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001767:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1968645	1968759	.	-	.	source_transcript=ENST00000752199.1;source_transcript_name=ENST00000752199;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752199.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001767;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001767;transcript_name=HG00140_ch_T0001767;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001767:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1968760	1969799	.	-	.	source_transcript=ENST00000752199.1;source_transcript_name=ENST00000752199;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752199.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001767;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001767;transcript_name=HG00140_ch_T0001767;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001767:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1969800	1969958	.	-	.	source_transcript=ENST00000752199.1;source_transcript_name=ENST00000752199;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752199.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752199.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001767;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001767;transcript_name=HG00140_ch_T0001767;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001767:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	1968271	1970571	1000	-	.	source_transcript=ENST00000752186.1;source_transcript_name=ENST00000752186;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752186.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001768;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_G0000655;transcript_name=HG00140_ch_T0001768;gene_name=ENSG00000297966;ID=HG00140_ch_T0001768;Name=ENSG00000297966
HG00140_chrY_random0000005	CAT	exon	1968271	1968435	.	-	.	source_transcript=ENST00000752186.1;source_transcript_name=ENST00000752186;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752186.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001768;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001768;transcript_name=HG00140_ch_T0001768;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001768:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1968436	1968644	.	-	.	source_transcript=ENST00000752186.1;source_transcript_name=ENST00000752186;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752186.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001768;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001768;transcript_name=HG00140_ch_T0001768;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001768:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1968645	1968759	.	-	.	source_transcript=ENST00000752186.1;source_transcript_name=ENST00000752186;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752186.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001768;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001768;transcript_name=HG00140_ch_T0001768;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001768:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1968760	1969799	.	-	.	source_transcript=ENST00000752186.1;source_transcript_name=ENST00000752186;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752186.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001768;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001768;transcript_name=HG00140_ch_T0001768;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001768:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1969800	1969860	.	-	.	source_transcript=ENST00000752186.1;source_transcript_name=ENST00000752186;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752186.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001768;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001768;transcript_name=HG00140_ch_T0001768;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001768:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1969861	1970398	.	-	.	source_transcript=ENST00000752186.1;source_transcript_name=ENST00000752186;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752186.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001768;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001768;transcript_name=HG00140_ch_T0001768;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001768:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1970399	1970571	.	-	.	source_transcript=ENST00000752186.1;source_transcript_name=ENST00000752186;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752186.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752186.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001768;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001768;transcript_name=HG00140_ch_T0001768;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001768:3;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	1968271	1971143	1000	-	.	source_transcript=ENST00000752183.1;source_transcript_name=ENST00000752183;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752183.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001769;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_G0000655;transcript_name=HG00140_ch_T0001769;gene_name=ENSG00000297966;ID=HG00140_ch_T0001769;Name=ENSG00000297966
HG00140_chrY_random0000005	CAT	exon	1968271	1968435	.	-	.	source_transcript=ENST00000752183.1;source_transcript_name=ENST00000752183;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001769;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001769;transcript_name=HG00140_ch_T0001769;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001769:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1968436	1968644	.	-	.	source_transcript=ENST00000752183.1;source_transcript_name=ENST00000752183;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001769;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001769;transcript_name=HG00140_ch_T0001769;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001769:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1968645	1968759	.	-	.	source_transcript=ENST00000752183.1;source_transcript_name=ENST00000752183;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001769;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001769;transcript_name=HG00140_ch_T0001769;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001769:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1968760	1969799	.	-	.	source_transcript=ENST00000752183.1;source_transcript_name=ENST00000752183;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001769;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001769;transcript_name=HG00140_ch_T0001769;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001769:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1969800	1969860	.	-	.	source_transcript=ENST00000752183.1;source_transcript_name=ENST00000752183;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001769;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001769;transcript_name=HG00140_ch_T0001769;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001769:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1969861	1971085	.	-	.	source_transcript=ENST00000752183.1;source_transcript_name=ENST00000752183;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001769;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001769;transcript_name=HG00140_ch_T0001769;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001769:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1971086	1971143	.	-	.	source_transcript=ENST00000752183.1;source_transcript_name=ENST00000752183;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752183.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001769;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001769;transcript_name=HG00140_ch_T0001769;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001769:3;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	1968271	1970570	1000	-	.	source_transcript=ENST00000752187.1;source_transcript_name=ENST00000752187;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752187.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001770;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_G0000655;transcript_name=HG00140_ch_T0001770;gene_name=ENSG00000297966;ID=HG00140_ch_T0001770;Name=ENSG00000297966
HG00140_chrY_random0000005	CAT	exon	1968271	1968435	.	-	.	source_transcript=ENST00000752187.1;source_transcript_name=ENST00000752187;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001770;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001770;transcript_name=HG00140_ch_T0001770;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001770:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1968436	1968644	.	-	.	source_transcript=ENST00000752187.1;source_transcript_name=ENST00000752187;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001770;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001770;transcript_name=HG00140_ch_T0001770;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001770:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1968645	1968759	.	-	.	source_transcript=ENST00000752187.1;source_transcript_name=ENST00000752187;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001770;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001770;transcript_name=HG00140_ch_T0001770;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001770:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1968760	1969621	.	-	.	source_transcript=ENST00000752187.1;source_transcript_name=ENST00000752187;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001770;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001770;transcript_name=HG00140_ch_T0001770;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001770:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1969622	1969860	.	-	.	source_transcript=ENST00000752187.1;source_transcript_name=ENST00000752187;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001770;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001770;transcript_name=HG00140_ch_T0001770;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001770:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1969861	1970398	.	-	.	source_transcript=ENST00000752187.1;source_transcript_name=ENST00000752187;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001770;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001770;transcript_name=HG00140_ch_T0001770;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001770:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1970399	1970570	.	-	.	source_transcript=ENST00000752187.1;source_transcript_name=ENST00000752187;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752187.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752187.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001770;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001770;transcript_name=HG00140_ch_T0001770;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001770:3;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	1968271	1970332	1000	-	.	source_transcript=ENST00000752193.1;source_transcript_name=ENST00000752193;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752193.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001771;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_G0000655;transcript_name=HG00140_ch_T0001771;gene_name=ENSG00000297966;ID=HG00140_ch_T0001771;Name=ENSG00000297966
HG00140_chrY_random0000005	CAT	exon	1968271	1968435	.	-	.	source_transcript=ENST00000752193.1;source_transcript_name=ENST00000752193;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001771;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001771;transcript_name=HG00140_ch_T0001771;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001771:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1968436	1968644	.	-	.	source_transcript=ENST00000752193.1;source_transcript_name=ENST00000752193;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001771;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001771;transcript_name=HG00140_ch_T0001771;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001771:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1968645	1968759	.	-	.	source_transcript=ENST00000752193.1;source_transcript_name=ENST00000752193;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001771;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001771;transcript_name=HG00140_ch_T0001771;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001771:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1968760	1969799	.	-	.	source_transcript=ENST00000752193.1;source_transcript_name=ENST00000752193;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001771;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001771;transcript_name=HG00140_ch_T0001771;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001771:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1969800	1969860	.	-	.	source_transcript=ENST00000752193.1;source_transcript_name=ENST00000752193;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001771;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001771;transcript_name=HG00140_ch_T0001771;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001771:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1969861	1970212	.	-	.	source_transcript=ENST00000752193.1;source_transcript_name=ENST00000752193;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001771;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001771;transcript_name=HG00140_ch_T0001771;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001771:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1970213	1970332	.	-	.	source_transcript=ENST00000752193.1;source_transcript_name=ENST00000752193;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752193.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001771;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001771;transcript_name=HG00140_ch_T0001771;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001771:3;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	1968271	1970540	1000	-	.	source_transcript=ENST00000752189.1;source_transcript_name=ENST00000752189;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752189.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001772;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_G0000655;transcript_name=HG00140_ch_T0001772;gene_name=ENSG00000297966;ID=HG00140_ch_T0001772;Name=ENSG00000297966
HG00140_chrY_random0000005	CAT	exon	1968271	1968435	.	-	.	source_transcript=ENST00000752189.1;source_transcript_name=ENST00000752189;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001772;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001772;transcript_name=HG00140_ch_T0001772;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001772:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1968436	1968644	.	-	.	source_transcript=ENST00000752189.1;source_transcript_name=ENST00000752189;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001772;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001772;transcript_name=HG00140_ch_T0001772;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001772:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1968645	1968759	.	-	.	source_transcript=ENST00000752189.1;source_transcript_name=ENST00000752189;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001772;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001772;transcript_name=HG00140_ch_T0001772;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001772:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1968760	1969621	.	-	.	source_transcript=ENST00000752189.1;source_transcript_name=ENST00000752189;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001772;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001772;transcript_name=HG00140_ch_T0001772;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001772:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1969622	1969860	.	-	.	source_transcript=ENST00000752189.1;source_transcript_name=ENST00000752189;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001772;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001772;transcript_name=HG00140_ch_T0001772;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001772:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1969861	1970127	.	-	.	source_transcript=ENST00000752189.1;source_transcript_name=ENST00000752189;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001772;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001772;transcript_name=HG00140_ch_T0001772;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001772:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1970128	1970540	.	-	.	source_transcript=ENST00000752189.1;source_transcript_name=ENST00000752189;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001772;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001772;transcript_name=HG00140_ch_T0001772;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001772:3;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	1968271	1970239	1000	-	.	source_transcript=ENST00000752195.1;source_transcript_name=ENST00000752195;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752195.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001773;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_G0000655;transcript_name=HG00140_ch_T0001773;gene_name=ENSG00000297966;ID=HG00140_ch_T0001773;Name=ENSG00000297966
HG00140_chrY_random0000005	CAT	exon	1968271	1968435	.	-	.	source_transcript=ENST00000752195.1;source_transcript_name=ENST00000752195;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001773;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001773;transcript_name=HG00140_ch_T0001773;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001773:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1968436	1968644	.	-	.	source_transcript=ENST00000752195.1;source_transcript_name=ENST00000752195;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001773;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001773;transcript_name=HG00140_ch_T0001773;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001773:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1968645	1968759	.	-	.	source_transcript=ENST00000752195.1;source_transcript_name=ENST00000752195;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001773;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001773;transcript_name=HG00140_ch_T0001773;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001773:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1968760	1969799	.	-	.	source_transcript=ENST00000752195.1;source_transcript_name=ENST00000752195;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001773;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001773;transcript_name=HG00140_ch_T0001773;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001773:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1969800	1969860	.	-	.	source_transcript=ENST00000752195.1;source_transcript_name=ENST00000752195;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001773;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001773;transcript_name=HG00140_ch_T0001773;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001773:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1969861	1969971	.	-	.	source_transcript=ENST00000752195.1;source_transcript_name=ENST00000752195;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001773;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001773;transcript_name=HG00140_ch_T0001773;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001773:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1969972	1970239	.	-	.	source_transcript=ENST00000752195.1;source_transcript_name=ENST00000752195;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752195.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001773;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001773;transcript_name=HG00140_ch_T0001773;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001773:3;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	1968271	1970320	1000	-	.	source_transcript=ENST00000752194.1;source_transcript_name=ENST00000752194;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752194.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001774;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_G0000655;transcript_name=HG00140_ch_T0001774;gene_name=ENSG00000297966;ID=HG00140_ch_T0001774;Name=ENSG00000297966
HG00140_chrY_random0000005	CAT	exon	1968271	1968759	.	-	.	source_transcript=ENST00000752194.1;source_transcript_name=ENST00000752194;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752194.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001774;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001774;transcript_name=HG00140_ch_T0001774;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001774:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1968760	1969799	.	-	.	source_transcript=ENST00000752194.1;source_transcript_name=ENST00000752194;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752194.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001774;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001774;transcript_name=HG00140_ch_T0001774;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001774:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1969800	1969860	.	-	.	source_transcript=ENST00000752194.1;source_transcript_name=ENST00000752194;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752194.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001774;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001774;transcript_name=HG00140_ch_T0001774;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001774:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1969861	1970127	.	-	.	source_transcript=ENST00000752194.1;source_transcript_name=ENST00000752194;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752194.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001774;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001774;transcript_name=HG00140_ch_T0001774;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001774:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1970128	1970320	.	-	.	source_transcript=ENST00000752194.1;source_transcript_name=ENST00000752194;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752194.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752194.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001774;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001774;transcript_name=HG00140_ch_T0001774;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001774:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	1968272	1970145	1000	-	.	source_transcript=ENST00000752197.1;source_transcript_name=ENST00000752197;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752197.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001775;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_G0000655;transcript_name=HG00140_ch_T0001775;gene_name=ENSG00000297966;ID=HG00140_ch_T0001775;Name=ENSG00000297966
HG00140_chrY_random0000005	CAT	exon	1968272	1968435	.	-	.	source_transcript=ENST00000752197.1;source_transcript_name=ENST00000752197;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001775;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001775;transcript_name=HG00140_ch_T0001775;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001775:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1968436	1968644	.	-	.	source_transcript=ENST00000752197.1;source_transcript_name=ENST00000752197;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001775;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001775;transcript_name=HG00140_ch_T0001775;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001775:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1968645	1968759	.	-	.	source_transcript=ENST00000752197.1;source_transcript_name=ENST00000752197;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001775;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001775;transcript_name=HG00140_ch_T0001775;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001775:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1968760	1969782	.	-	.	source_transcript=ENST00000752197.1;source_transcript_name=ENST00000752197;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001775;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001775;transcript_name=HG00140_ch_T0001775;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001775:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1969783	1969860	.	-	.	source_transcript=ENST00000752197.1;source_transcript_name=ENST00000752197;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001775;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001775;transcript_name=HG00140_ch_T0001775;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001775:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1969861	1969971	.	-	.	source_transcript=ENST00000752197.1;source_transcript_name=ENST00000752197;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001775;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001775;transcript_name=HG00140_ch_T0001775;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001775:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1969972	1970145	.	-	.	source_transcript=ENST00000752197.1;source_transcript_name=ENST00000752197;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752197.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001775;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001775;transcript_name=HG00140_ch_T0001775;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001775:3;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	1968272	1970155	1000	-	.	source_transcript=ENST00000752196.1;source_transcript_name=ENST00000752196;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752196.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001776;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_G0000655;transcript_name=HG00140_ch_T0001776;gene_name=ENSG00000297966;ID=HG00140_ch_T0001776;Name=ENSG00000297966
HG00140_chrY_random0000005	CAT	exon	1968272	1968435	.	-	.	source_transcript=ENST00000752196.1;source_transcript_name=ENST00000752196;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752196.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001776;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001776;transcript_name=HG00140_ch_T0001776;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001776:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1968436	1968644	.	-	.	source_transcript=ENST00000752196.1;source_transcript_name=ENST00000752196;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752196.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001776;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001776;transcript_name=HG00140_ch_T0001776;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001776:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1968645	1968759	.	-	.	source_transcript=ENST00000752196.1;source_transcript_name=ENST00000752196;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752196.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001776;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001776;transcript_name=HG00140_ch_T0001776;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001776:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1968760	1969621	.	-	.	source_transcript=ENST00000752196.1;source_transcript_name=ENST00000752196;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752196.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001776;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001776;transcript_name=HG00140_ch_T0001776;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001776:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1969622	1969860	.	-	.	source_transcript=ENST00000752196.1;source_transcript_name=ENST00000752196;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752196.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001776;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001776;transcript_name=HG00140_ch_T0001776;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001776:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1969861	1969971	.	-	.	source_transcript=ENST00000752196.1;source_transcript_name=ENST00000752196;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752196.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001776;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001776;transcript_name=HG00140_ch_T0001776;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001776:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1969972	1970155	.	-	.	source_transcript=ENST00000752196.1;source_transcript_name=ENST00000752196;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752196.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752196.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001776;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001776;transcript_name=HG00140_ch_T0001776;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001776:3;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	1968272	1970113	1000	-	.	source_transcript=ENST00000752198.1;source_transcript_name=ENST00000752198;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752198.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001777;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_G0000655;transcript_name=HG00140_ch_T0001777;gene_name=ENSG00000297966;ID=HG00140_ch_T0001777;Name=ENSG00000297966
HG00140_chrY_random0000005	CAT	exon	1968272	1968759	.	-	.	source_transcript=ENST00000752198.1;source_transcript_name=ENST00000752198;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752198.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001777;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001777;transcript_name=HG00140_ch_T0001777;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001777:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1968760	1969621	.	-	.	source_transcript=ENST00000752198.1;source_transcript_name=ENST00000752198;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752198.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001777;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001777;transcript_name=HG00140_ch_T0001777;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001777:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1969622	1969860	.	-	.	source_transcript=ENST00000752198.1;source_transcript_name=ENST00000752198;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752198.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001777;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001777;transcript_name=HG00140_ch_T0001777;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001777:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1969861	1969971	.	-	.	source_transcript=ENST00000752198.1;source_transcript_name=ENST00000752198;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752198.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001777;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001777;transcript_name=HG00140_ch_T0001777;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001777:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1969972	1970113	.	-	.	source_transcript=ENST00000752198.1;source_transcript_name=ENST00000752198;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752198.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752198.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001777;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001777;transcript_name=HG00140_ch_T0001777;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001777:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	1968272	1968964	1000	-	.	source_transcript=ENST00000752200.1;source_transcript_name=ENST00000752200;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752200.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001778;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_G0000655;transcript_name=HG00140_ch_T0001778;gene_name=ENSG00000297966;ID=HG00140_ch_T0001778;Name=ENSG00000297966
HG00140_chrY_random0000005	CAT	exon	1968272	1968435	.	-	.	source_transcript=ENST00000752200.1;source_transcript_name=ENST00000752200;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752200.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001778;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001778;transcript_name=HG00140_ch_T0001778;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001778:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1968436	1968644	.	-	.	source_transcript=ENST00000752200.1;source_transcript_name=ENST00000752200;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752200.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001778;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001778;transcript_name=HG00140_ch_T0001778;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001778:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1968645	1968964	.	-	.	source_transcript=ENST00000752200.1;source_transcript_name=ENST00000752200;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752200.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001778;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001778;transcript_name=HG00140_ch_T0001778;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001778:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	1968273	1970336	1000	-	.	source_transcript=ENST00000752192.1;source_transcript_name=ENST00000752192;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752192.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001779;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_G0000655;transcript_name=HG00140_ch_T0001779;gene_name=ENSG00000297966;ID=HG00140_ch_T0001779;Name=ENSG00000297966
HG00140_chrY_random0000005	CAT	exon	1968273	1968759	.	-	.	source_transcript=ENST00000752192.1;source_transcript_name=ENST00000752192;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001779;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001779;transcript_name=HG00140_ch_T0001779;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001779:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1968760	1969621	.	-	.	source_transcript=ENST00000752192.1;source_transcript_name=ENST00000752192;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001779;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001779;transcript_name=HG00140_ch_T0001779;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001779:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1969622	1969860	.	-	.	source_transcript=ENST00000752192.1;source_transcript_name=ENST00000752192;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001779;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001779;transcript_name=HG00140_ch_T0001779;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001779:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1969861	1970127	.	-	.	source_transcript=ENST00000752192.1;source_transcript_name=ENST00000752192;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001779;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001779;transcript_name=HG00140_ch_T0001779;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001779:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1970128	1970336	.	-	.	source_transcript=ENST00000752192.1;source_transcript_name=ENST00000752192;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752192.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752192.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001779;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001779;transcript_name=HG00140_ch_T0001779;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001779:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	1968274	1970355	1000	-	.	source_transcript=ENST00000752191.1;source_transcript_name=ENST00000752191;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752191.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001780;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_G0000655;transcript_name=HG00140_ch_T0001780;gene_name=ENSG00000297966;ID=HG00140_ch_T0001780;Name=ENSG00000297966
HG00140_chrY_random0000005	CAT	exon	1968274	1968435	.	-	.	source_transcript=ENST00000752191.1;source_transcript_name=ENST00000752191;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001780;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001780;transcript_name=HG00140_ch_T0001780;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001780:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1968436	1968644	.	-	.	source_transcript=ENST00000752191.1;source_transcript_name=ENST00000752191;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001780;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001780;transcript_name=HG00140_ch_T0001780;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001780:0;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1968645	1968759	.	-	.	source_transcript=ENST00000752191.1;source_transcript_name=ENST00000752191;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001780;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001780;transcript_name=HG00140_ch_T0001780;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001780:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1968760	1969782	.	-	.	source_transcript=ENST00000752191.1;source_transcript_name=ENST00000752191;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001780;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001780;transcript_name=HG00140_ch_T0001780;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001780:1;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1969783	1969860	.	-	.	source_transcript=ENST00000752191.1;source_transcript_name=ENST00000752191;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001780;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001780;transcript_name=HG00140_ch_T0001780;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001780:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1969861	1970212	.	-	.	source_transcript=ENST00000752191.1;source_transcript_name=ENST00000752191;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001780;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001780;transcript_name=HG00140_ch_T0001780;gene_name=ENSG00000297966;ID=intron:HG00140_ch_T0001780:2;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1970213	1970355	.	-	.	source_transcript=ENST00000752191.1;source_transcript_name=ENST00000752191;source_gene=ENSG00000297966.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297966.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752191.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752191.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297966;transcript_id=HG00140_ch_T0001780;gene_id=HG00140_ch_G0000655;Parent=HG00140_ch_T0001780;transcript_name=HG00140_ch_T0001780;gene_name=ENSG00000297966;ID=exon:HG00140_ch_T0001780:3;Name=ENSG00000297966;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	1968303	1974611	.	-	.	source_gene_common_name=GOLGA6L11P;source_gene=ENSG00000223698.3;gene_id=HG00140_ch_G0000656;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=GOLGA6L11P;gene_sources=liftoff;ID=HG00140_ch_G0000656;Name=GOLGA6L11P
HG00140_chrY_random0000005	CAT	transcript	1968303	1974611	1000	-	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=HG00140_ch_T0001781;gene_id=HG00140_ch_G0000656;Parent=HG00140_ch_G0000656;transcript_name=HG00140_ch_T0001781;gene_name=GOLGA6L11P;ID=HG00140_ch_T0001781;Name=GOLGA6L11P
HG00140_chrY_random0000005	CAT	exon	1968303	1968435	.	-	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=HG00140_ch_T0001781;gene_id=HG00140_ch_G0000656;Parent=HG00140_ch_T0001781;transcript_name=HG00140_ch_T0001781;gene_name=GOLGA6L11P;ID=exon:HG00140_ch_T0001781:0;Name=GOLGA6L11P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1968436	1968644	.	-	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=HG00140_ch_T0001781;gene_id=HG00140_ch_G0000656;Parent=HG00140_ch_T0001781;transcript_name=HG00140_ch_T0001781;gene_name=GOLGA6L11P;ID=intron:HG00140_ch_T0001781:0;Name=GOLGA6L11P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1968645	1968759	.	-	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=HG00140_ch_T0001781;gene_id=HG00140_ch_G0000656;Parent=HG00140_ch_T0001781;transcript_name=HG00140_ch_T0001781;gene_name=GOLGA6L11P;ID=exon:HG00140_ch_T0001781:1;Name=GOLGA6L11P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1968760	1969799	.	-	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=HG00140_ch_T0001781;gene_id=HG00140_ch_G0000656;Parent=HG00140_ch_T0001781;transcript_name=HG00140_ch_T0001781;gene_name=GOLGA6L11P;ID=intron:HG00140_ch_T0001781:1;Name=GOLGA6L11P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1969800	1969860	.	-	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=HG00140_ch_T0001781;gene_id=HG00140_ch_G0000656;Parent=HG00140_ch_T0001781;transcript_name=HG00140_ch_T0001781;gene_name=GOLGA6L11P;ID=exon:HG00140_ch_T0001781:2;Name=GOLGA6L11P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1969861	1970127	.	-	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=HG00140_ch_T0001781;gene_id=HG00140_ch_G0000656;Parent=HG00140_ch_T0001781;transcript_name=HG00140_ch_T0001781;gene_name=GOLGA6L11P;ID=intron:HG00140_ch_T0001781:2;Name=GOLGA6L11P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1970128	1970696	.	-	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=HG00140_ch_T0001781;gene_id=HG00140_ch_G0000656;Parent=HG00140_ch_T0001781;transcript_name=HG00140_ch_T0001781;gene_name=GOLGA6L11P;ID=exon:HG00140_ch_T0001781:3;Name=GOLGA6L11P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1970697	1971085	.	-	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=HG00140_ch_T0001781;gene_id=HG00140_ch_G0000656;Parent=HG00140_ch_T0001781;transcript_name=HG00140_ch_T0001781;gene_name=GOLGA6L11P;ID=intron:HG00140_ch_T0001781:3;Name=GOLGA6L11P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1971086	1971160	.	-	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=HG00140_ch_T0001781;gene_id=HG00140_ch_G0000656;Parent=HG00140_ch_T0001781;transcript_name=HG00140_ch_T0001781;gene_name=GOLGA6L11P;ID=exon:HG00140_ch_T0001781:4;Name=GOLGA6L11P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1971161	1971816	.	-	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=HG00140_ch_T0001781;gene_id=HG00140_ch_G0000656;Parent=HG00140_ch_T0001781;transcript_name=HG00140_ch_T0001781;gene_name=GOLGA6L11P;ID=intron:HG00140_ch_T0001781:4;Name=GOLGA6L11P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1971817	1971897	.	-	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=HG00140_ch_T0001781;gene_id=HG00140_ch_G0000656;Parent=HG00140_ch_T0001781;transcript_name=HG00140_ch_T0001781;gene_name=GOLGA6L11P;ID=exon:HG00140_ch_T0001781:5;Name=GOLGA6L11P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1971898	1972082	.	-	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=HG00140_ch_T0001781;gene_id=HG00140_ch_G0000656;Parent=HG00140_ch_T0001781;transcript_name=HG00140_ch_T0001781;gene_name=GOLGA6L11P;ID=intron:HG00140_ch_T0001781:5;Name=GOLGA6L11P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1972083	1972142	.	-	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=HG00140_ch_T0001781;gene_id=HG00140_ch_G0000656;Parent=HG00140_ch_T0001781;transcript_name=HG00140_ch_T0001781;gene_name=GOLGA6L11P;ID=exon:HG00140_ch_T0001781:6;Name=GOLGA6L11P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1972143	1972764	.	-	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=HG00140_ch_T0001781;gene_id=HG00140_ch_G0000656;Parent=HG00140_ch_T0001781;transcript_name=HG00140_ch_T0001781;gene_name=GOLGA6L11P;ID=intron:HG00140_ch_T0001781:6;Name=GOLGA6L11P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1972765	1972884	.	-	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=HG00140_ch_T0001781;gene_id=HG00140_ch_G0000656;Parent=HG00140_ch_T0001781;transcript_name=HG00140_ch_T0001781;gene_name=GOLGA6L11P;ID=exon:HG00140_ch_T0001781:7;Name=GOLGA6L11P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1972885	1974527	.	-	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=HG00140_ch_T0001781;gene_id=HG00140_ch_G0000656;Parent=HG00140_ch_T0001781;transcript_name=HG00140_ch_T0001781;gene_name=GOLGA6L11P;ID=intron:HG00140_ch_T0001781:7;Name=GOLGA6L11P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1974528	1974611	.	-	.	source_transcript=ENST00000417252.2;source_transcript_name=GOLGA6L11P-201;source_gene=ENSG00000223698.3;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000223698.3;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000417252.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000417252.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA6L11P;transcript_id=HG00140_ch_T0001781;gene_id=HG00140_ch_G0000656;Parent=HG00140_ch_T0001781;transcript_name=HG00140_ch_T0001781;gene_name=GOLGA6L11P;ID=exon:HG00140_ch_T0001781:8;Name=GOLGA6L11P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	1984954	2000439	.	-	.	source_gene_common_name=ENSG00000235583;source_gene=ENSG00000235583.2;gene_id=HG00140_ch_G0000657;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000235583;gene_sources=liftoff;ID=HG00140_ch_G0000657;Name=ENSG00000235583
HG00140_chrY_random0000005	CAT	transcript	1984954	2000439	1000	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=HG00140_ch_T0001782;gene_id=HG00140_ch_G0000657;Parent=HG00140_ch_G0000657;transcript_name=HG00140_ch_T0001782;gene_name=ENSG00000235583;ID=HG00140_ch_T0001782;Name=ENSG00000235583
HG00140_chrY_random0000005	CAT	exon	1984954	1985049	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=HG00140_ch_T0001782;gene_id=HG00140_ch_G0000657;Parent=HG00140_ch_T0001782;transcript_name=HG00140_ch_T0001782;gene_name=ENSG00000235583;ID=exon:HG00140_ch_T0001782:0;Name=ENSG00000235583;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1985050	1985777	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=HG00140_ch_T0001782;gene_id=HG00140_ch_G0000657;Parent=HG00140_ch_T0001782;transcript_name=HG00140_ch_T0001782;gene_name=ENSG00000235583;ID=intron:HG00140_ch_T0001782:0;Name=ENSG00000235583;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1985778	1985826	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=HG00140_ch_T0001782;gene_id=HG00140_ch_G0000657;Parent=HG00140_ch_T0001782;transcript_name=HG00140_ch_T0001782;gene_name=ENSG00000235583;ID=exon:HG00140_ch_T0001782:1;Name=ENSG00000235583;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1985827	1992331	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=HG00140_ch_T0001782;gene_id=HG00140_ch_G0000657;Parent=HG00140_ch_T0001782;transcript_name=HG00140_ch_T0001782;gene_name=ENSG00000235583;ID=intron:HG00140_ch_T0001782:1;Name=ENSG00000235583;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1992332	1992390	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=HG00140_ch_T0001782;gene_id=HG00140_ch_G0000657;Parent=HG00140_ch_T0001782;transcript_name=HG00140_ch_T0001782;gene_name=ENSG00000235583;ID=exon:HG00140_ch_T0001782:2;Name=ENSG00000235583;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1992391	1996673	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=HG00140_ch_T0001782;gene_id=HG00140_ch_G0000657;Parent=HG00140_ch_T0001782;transcript_name=HG00140_ch_T0001782;gene_name=ENSG00000235583;ID=intron:HG00140_ch_T0001782:2;Name=ENSG00000235583;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1996674	1996763	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=HG00140_ch_T0001782;gene_id=HG00140_ch_G0000657;Parent=HG00140_ch_T0001782;transcript_name=HG00140_ch_T0001782;gene_name=ENSG00000235583;ID=exon:HG00140_ch_T0001782:3;Name=ENSG00000235583;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1996764	1997856	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=HG00140_ch_T0001782;gene_id=HG00140_ch_G0000657;Parent=HG00140_ch_T0001782;transcript_name=HG00140_ch_T0001782;gene_name=ENSG00000235583;ID=intron:HG00140_ch_T0001782:3;Name=ENSG00000235583;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1997857	1997941	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=HG00140_ch_T0001782;gene_id=HG00140_ch_G0000657;Parent=HG00140_ch_T0001782;transcript_name=HG00140_ch_T0001782;gene_name=ENSG00000235583;ID=exon:HG00140_ch_T0001782:4;Name=ENSG00000235583;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1997942	2000301	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=HG00140_ch_T0001782;gene_id=HG00140_ch_G0000657;Parent=HG00140_ch_T0001782;transcript_name=HG00140_ch_T0001782;gene_name=ENSG00000235583;ID=intron:HG00140_ch_T0001782:4;Name=ENSG00000235583;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2000302	2000439	.	-	.	source_transcript=ENST00000421819.1;source_transcript_name=ENST00000421819;source_gene=ENSG00000235583.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000235583.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421819.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421819.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000235583;transcript_id=HG00140_ch_T0001782;gene_id=HG00140_ch_G0000657;Parent=HG00140_ch_T0001782;transcript_name=HG00140_ch_T0001782;gene_name=ENSG00000235583;ID=exon:HG00140_ch_T0001782:5;Name=ENSG00000235583;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	1990016	2005412	.	-	.	source_gene_common_name=ENSG00000304207;source_gene=ENSG00000304207.1;gene_id=HG00140_ch_G0000658;gene_biotype=lncRNA;gene_name=ENSG00000304207;gene_sources=liftoff;ID=HG00140_ch_G0000658;Name=ENSG00000304207
HG00140_chrY_random0000005	CAT	transcript	1990016	2005411	1000	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001783;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_G0000658;transcript_name=HG00140_ch_T0001783;gene_name=ENSG00000304207;ID=HG00140_ch_T0001783;Name=ENSG00000304207
HG00140_chrY_random0000005	CAT	exon	1990016	1990451	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001783;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001783;transcript_name=HG00140_ch_T0001783;gene_name=ENSG00000304207;ID=exon:HG00140_ch_T0001783:0;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1990452	1996678	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001783;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001783;transcript_name=HG00140_ch_T0001783;gene_name=ENSG00000304207;ID=intron:HG00140_ch_T0001783:0;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1996679	1996763	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001783;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001783;transcript_name=HG00140_ch_T0001783;gene_name=ENSG00000304207;ID=exon:HG00140_ch_T0001783:1;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1996764	1997856	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001783;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001783;transcript_name=HG00140_ch_T0001783;gene_name=ENSG00000304207;ID=intron:HG00140_ch_T0001783:1;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1997857	1997941	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001783;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001783;transcript_name=HG00140_ch_T0001783;gene_name=ENSG00000304207;ID=exon:HG00140_ch_T0001783:2;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1997942	2000317	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001783;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001783;transcript_name=HG00140_ch_T0001783;gene_name=ENSG00000304207;ID=intron:HG00140_ch_T0001783:2;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2000318	2000439	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001783;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001783;transcript_name=HG00140_ch_T0001783;gene_name=ENSG00000304207;ID=exon:HG00140_ch_T0001783:3;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2000440	2004395	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001783;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001783;transcript_name=HG00140_ch_T0001783;gene_name=ENSG00000304207;ID=intron:HG00140_ch_T0001783:3;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2004396	2004558	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001783;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001783;transcript_name=HG00140_ch_T0001783;gene_name=ENSG00000304207;ID=exon:HG00140_ch_T0001783:4;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2004559	2005306	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001783;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001783;transcript_name=HG00140_ch_T0001783;gene_name=ENSG00000304207;ID=intron:HG00140_ch_T0001783:4;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2005307	2005411	.	-	.	source_transcript=ENST00000801027.1;source_transcript_name=ENST00000801027;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801027.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801027.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001783;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001783;transcript_name=HG00140_ch_T0001783;gene_name=ENSG00000304207;ID=exon:HG00140_ch_T0001783:5;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	1990016	2005412	1000	-	.	source_transcript=ENST00000801026.1;source_transcript_name=ENST00000801026;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801026.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001784;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_G0000658;transcript_name=HG00140_ch_T0001784;gene_name=ENSG00000304207;ID=HG00140_ch_T0001784;Name=ENSG00000304207
HG00140_chrY_random0000005	CAT	exon	1990016	1990451	.	-	.	source_transcript=ENST00000801026.1;source_transcript_name=ENST00000801026;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001784;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001784;transcript_name=HG00140_ch_T0001784;gene_name=ENSG00000304207;ID=exon:HG00140_ch_T0001784:0;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1990452	1996678	.	-	.	source_transcript=ENST00000801026.1;source_transcript_name=ENST00000801026;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001784;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001784;transcript_name=HG00140_ch_T0001784;gene_name=ENSG00000304207;ID=intron:HG00140_ch_T0001784:0;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1996679	1996763	.	-	.	source_transcript=ENST00000801026.1;source_transcript_name=ENST00000801026;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001784;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001784;transcript_name=HG00140_ch_T0001784;gene_name=ENSG00000304207;ID=exon:HG00140_ch_T0001784:1;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1996764	2000301	.	-	.	source_transcript=ENST00000801026.1;source_transcript_name=ENST00000801026;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001784;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001784;transcript_name=HG00140_ch_T0001784;gene_name=ENSG00000304207;ID=intron:HG00140_ch_T0001784:1;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2000302	2000439	.	-	.	source_transcript=ENST00000801026.1;source_transcript_name=ENST00000801026;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001784;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001784;transcript_name=HG00140_ch_T0001784;gene_name=ENSG00000304207;ID=exon:HG00140_ch_T0001784:2;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2000440	2005306	.	-	.	source_transcript=ENST00000801026.1;source_transcript_name=ENST00000801026;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001784;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001784;transcript_name=HG00140_ch_T0001784;gene_name=ENSG00000304207;ID=intron:HG00140_ch_T0001784:2;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2005307	2005412	.	-	.	source_transcript=ENST00000801026.1;source_transcript_name=ENST00000801026;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801026.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801026.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001784;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001784;transcript_name=HG00140_ch_T0001784;gene_name=ENSG00000304207;ID=exon:HG00140_ch_T0001784:3;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	1990016	2005404	1000	-	.	source_transcript=ENST00000801028.1;source_transcript_name=ENST00000801028;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801028.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001785;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_G0000658;transcript_name=HG00140_ch_T0001785;gene_name=ENSG00000304207;ID=HG00140_ch_T0001785;Name=ENSG00000304207
HG00140_chrY_random0000005	CAT	exon	1990016	1990451	.	-	.	source_transcript=ENST00000801028.1;source_transcript_name=ENST00000801028;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001785;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001785;transcript_name=HG00140_ch_T0001785;gene_name=ENSG00000304207;ID=exon:HG00140_ch_T0001785:0;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1990452	1996678	.	-	.	source_transcript=ENST00000801028.1;source_transcript_name=ENST00000801028;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001785;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001785;transcript_name=HG00140_ch_T0001785;gene_name=ENSG00000304207;ID=intron:HG00140_ch_T0001785:0;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1996679	1996763	.	-	.	source_transcript=ENST00000801028.1;source_transcript_name=ENST00000801028;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001785;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001785;transcript_name=HG00140_ch_T0001785;gene_name=ENSG00000304207;ID=exon:HG00140_ch_T0001785:1;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1996764	2000317	.	-	.	source_transcript=ENST00000801028.1;source_transcript_name=ENST00000801028;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001785;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001785;transcript_name=HG00140_ch_T0001785;gene_name=ENSG00000304207;ID=intron:HG00140_ch_T0001785:1;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2000318	2000439	.	-	.	source_transcript=ENST00000801028.1;source_transcript_name=ENST00000801028;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001785;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001785;transcript_name=HG00140_ch_T0001785;gene_name=ENSG00000304207;ID=exon:HG00140_ch_T0001785:2;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2000440	2004395	.	-	.	source_transcript=ENST00000801028.1;source_transcript_name=ENST00000801028;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001785;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001785;transcript_name=HG00140_ch_T0001785;gene_name=ENSG00000304207;ID=intron:HG00140_ch_T0001785:2;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2004396	2004558	.	-	.	source_transcript=ENST00000801028.1;source_transcript_name=ENST00000801028;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001785;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001785;transcript_name=HG00140_ch_T0001785;gene_name=ENSG00000304207;ID=exon:HG00140_ch_T0001785:3;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2004559	2005306	.	-	.	source_transcript=ENST00000801028.1;source_transcript_name=ENST00000801028;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001785;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001785;transcript_name=HG00140_ch_T0001785;gene_name=ENSG00000304207;ID=intron:HG00140_ch_T0001785:3;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2005307	2005404	.	-	.	source_transcript=ENST00000801028.1;source_transcript_name=ENST00000801028;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801028.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801028.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001785;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001785;transcript_name=HG00140_ch_T0001785;gene_name=ENSG00000304207;ID=exon:HG00140_ch_T0001785:4;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	1990029	2005353	1000	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001786;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_G0000658;transcript_name=HG00140_ch_T0001786;gene_name=ENSG00000304207;ID=HG00140_ch_T0001786;Name=ENSG00000304207
HG00140_chrY_random0000005	CAT	exon	1990029	1990451	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001786;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001786;transcript_name=HG00140_ch_T0001786;gene_name=ENSG00000304207;ID=exon:HG00140_ch_T0001786:0;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1990452	1996678	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001786;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001786;transcript_name=HG00140_ch_T0001786;gene_name=ENSG00000304207;ID=intron:HG00140_ch_T0001786:0;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1996679	1996763	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001786;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001786;transcript_name=HG00140_ch_T0001786;gene_name=ENSG00000304207;ID=exon:HG00140_ch_T0001786:1;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1996764	1997856	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001786;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001786;transcript_name=HG00140_ch_T0001786;gene_name=ENSG00000304207;ID=intron:HG00140_ch_T0001786:1;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1997857	1997941	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001786;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001786;transcript_name=HG00140_ch_T0001786;gene_name=ENSG00000304207;ID=exon:HG00140_ch_T0001786:2;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1997942	2000301	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001786;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001786;transcript_name=HG00140_ch_T0001786;gene_name=ENSG00000304207;ID=intron:HG00140_ch_T0001786:2;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2000302	2000439	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001786;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001786;transcript_name=HG00140_ch_T0001786;gene_name=ENSG00000304207;ID=exon:HG00140_ch_T0001786:3;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2000440	2004395	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001786;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001786;transcript_name=HG00140_ch_T0001786;gene_name=ENSG00000304207;ID=intron:HG00140_ch_T0001786:3;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2004396	2004558	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001786;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001786;transcript_name=HG00140_ch_T0001786;gene_name=ENSG00000304207;ID=exon:HG00140_ch_T0001786:4;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2004559	2005306	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001786;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001786;transcript_name=HG00140_ch_T0001786;gene_name=ENSG00000304207;ID=intron:HG00140_ch_T0001786:4;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2005307	2005353	.	-	.	source_transcript=ENST00000801030.1;source_transcript_name=ENST00000801030;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801030.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801030.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001786;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001786;transcript_name=HG00140_ch_T0001786;gene_name=ENSG00000304207;ID=exon:HG00140_ch_T0001786:5;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	1990029	2005395	1000	-	.	source_transcript=ENST00000801029.1;source_transcript_name=ENST00000801029;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801029.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001787;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_G0000658;transcript_name=HG00140_ch_T0001787;gene_name=ENSG00000304207;ID=HG00140_ch_T0001787;Name=ENSG00000304207
HG00140_chrY_random0000005	CAT	exon	1990029	1990451	.	-	.	source_transcript=ENST00000801029.1;source_transcript_name=ENST00000801029;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001787;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001787;transcript_name=HG00140_ch_T0001787;gene_name=ENSG00000304207;ID=exon:HG00140_ch_T0001787:0;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1990452	1996678	.	-	.	source_transcript=ENST00000801029.1;source_transcript_name=ENST00000801029;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001787;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001787;transcript_name=HG00140_ch_T0001787;gene_name=ENSG00000304207;ID=intron:HG00140_ch_T0001787:0;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1996679	1996763	.	-	.	source_transcript=ENST00000801029.1;source_transcript_name=ENST00000801029;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001787;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001787;transcript_name=HG00140_ch_T0001787;gene_name=ENSG00000304207;ID=exon:HG00140_ch_T0001787:1;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1996764	1997856	.	-	.	source_transcript=ENST00000801029.1;source_transcript_name=ENST00000801029;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001787;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001787;transcript_name=HG00140_ch_T0001787;gene_name=ENSG00000304207;ID=intron:HG00140_ch_T0001787:1;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1997857	1997941	.	-	.	source_transcript=ENST00000801029.1;source_transcript_name=ENST00000801029;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001787;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001787;transcript_name=HG00140_ch_T0001787;gene_name=ENSG00000304207;ID=exon:HG00140_ch_T0001787:2;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1997942	2000301	.	-	.	source_transcript=ENST00000801029.1;source_transcript_name=ENST00000801029;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001787;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001787;transcript_name=HG00140_ch_T0001787;gene_name=ENSG00000304207;ID=intron:HG00140_ch_T0001787:2;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2000302	2000439	.	-	.	source_transcript=ENST00000801029.1;source_transcript_name=ENST00000801029;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001787;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001787;transcript_name=HG00140_ch_T0001787;gene_name=ENSG00000304207;ID=exon:HG00140_ch_T0001787:3;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2000440	2005306	.	-	.	source_transcript=ENST00000801029.1;source_transcript_name=ENST00000801029;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001787;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001787;transcript_name=HG00140_ch_T0001787;gene_name=ENSG00000304207;ID=intron:HG00140_ch_T0001787:3;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2005307	2005395	.	-	.	source_transcript=ENST00000801029.1;source_transcript_name=ENST00000801029;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801029.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801029.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001787;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001787;transcript_name=HG00140_ch_T0001787;gene_name=ENSG00000304207;ID=exon:HG00140_ch_T0001787:4;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	1990262	2004703	1000	-	.	source_transcript=ENST00000801031.1;source_transcript_name=ENST00000801031;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801031.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001788;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_G0000658;transcript_name=HG00140_ch_T0001788;gene_name=ENSG00000304207;ID=HG00140_ch_T0001788;Name=ENSG00000304207
HG00140_chrY_random0000005	CAT	exon	1990262	1990451	.	-	.	source_transcript=ENST00000801031.1;source_transcript_name=ENST00000801031;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001788;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001788;transcript_name=HG00140_ch_T0001788;gene_name=ENSG00000304207;ID=exon:HG00140_ch_T0001788:0;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1990452	1996678	.	-	.	source_transcript=ENST00000801031.1;source_transcript_name=ENST00000801031;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001788;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001788;transcript_name=HG00140_ch_T0001788;gene_name=ENSG00000304207;ID=intron:HG00140_ch_T0001788:0;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1996679	1996763	.	-	.	source_transcript=ENST00000801031.1;source_transcript_name=ENST00000801031;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001788;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001788;transcript_name=HG00140_ch_T0001788;gene_name=ENSG00000304207;ID=exon:HG00140_ch_T0001788:1;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1996764	1997856	.	-	.	source_transcript=ENST00000801031.1;source_transcript_name=ENST00000801031;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001788;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001788;transcript_name=HG00140_ch_T0001788;gene_name=ENSG00000304207;ID=intron:HG00140_ch_T0001788:1;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	1997857	1997941	.	-	.	source_transcript=ENST00000801031.1;source_transcript_name=ENST00000801031;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001788;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001788;transcript_name=HG00140_ch_T0001788;gene_name=ENSG00000304207;ID=exon:HG00140_ch_T0001788:2;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	1997942	2000317	.	-	.	source_transcript=ENST00000801031.1;source_transcript_name=ENST00000801031;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001788;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001788;transcript_name=HG00140_ch_T0001788;gene_name=ENSG00000304207;ID=intron:HG00140_ch_T0001788:2;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2000318	2000439	.	-	.	source_transcript=ENST00000801031.1;source_transcript_name=ENST00000801031;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001788;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001788;transcript_name=HG00140_ch_T0001788;gene_name=ENSG00000304207;ID=exon:HG00140_ch_T0001788:3;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2000440	2004395	.	-	.	source_transcript=ENST00000801031.1;source_transcript_name=ENST00000801031;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001788;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001788;transcript_name=HG00140_ch_T0001788;gene_name=ENSG00000304207;ID=intron:HG00140_ch_T0001788:3;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2004396	2004703	.	-	.	source_transcript=ENST00000801031.1;source_transcript_name=ENST00000801031;source_gene=ENSG00000304207.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000304207.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000801031.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000801031.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000304207;transcript_id=HG00140_ch_T0001788;gene_id=HG00140_ch_G0000658;Parent=HG00140_ch_T0001788;transcript_name=HG00140_ch_T0001788;gene_name=ENSG00000304207;ID=exon:HG00140_ch_T0001788:4;Name=ENSG00000304207;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	2036762	2038673	.	-	.	source_gene_common_name=CDY19P;source_gene=ENSG00000237823.1;gene_id=HG00140_ch_G0000659;gene_biotype=unprocessed_pseudogene;gene_name=CDY19P;gene_sources=liftoff;ID=HG00140_ch_G0000659;Name=CDY19P
HG00140_chrY_random0000005	CAT	transcript	2036762	2038673	1000	-	.	source_transcript=ENST00000411668.1;source_transcript_name=CDY19P-201;source_gene=ENSG00000237823.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237823.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000411668.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411668.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY19P;transcript_id=HG00140_ch_T0001789;gene_id=HG00140_ch_G0000659;Parent=HG00140_ch_G0000659;transcript_name=HG00140_ch_T0001789;gene_name=CDY19P;ID=HG00140_ch_T0001789;Name=CDY19P
HG00140_chrY_random0000005	CAT	exon	2036762	2038203	.	-	.	source_transcript=ENST00000411668.1;source_transcript_name=CDY19P-201;source_gene=ENSG00000237823.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237823.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000411668.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY19P;transcript_id=HG00140_ch_T0001789;gene_id=HG00140_ch_G0000659;Parent=HG00140_ch_T0001789;transcript_name=HG00140_ch_T0001789;gene_name=CDY19P;ID=exon:HG00140_ch_T0001789:0;Name=CDY19P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2038204	2038502	.	-	.	source_transcript=ENST00000411668.1;source_transcript_name=CDY19P-201;source_gene=ENSG00000237823.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237823.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000411668.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY19P;transcript_id=HG00140_ch_T0001789;gene_id=HG00140_ch_G0000659;Parent=HG00140_ch_T0001789;transcript_name=HG00140_ch_T0001789;gene_name=CDY19P;ID=intron:HG00140_ch_T0001789:0;Name=CDY19P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2038503	2038673	.	-	.	source_transcript=ENST00000411668.1;source_transcript_name=CDY19P-201;source_gene=ENSG00000237823.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237823.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000411668.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY19P;transcript_id=HG00140_ch_T0001789;gene_id=HG00140_ch_G0000659;Parent=HG00140_ch_T0001789;transcript_name=HG00140_ch_T0001789;gene_name=CDY19P;ID=exon:HG00140_ch_T0001789:1;Name=CDY19P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	2052430	2061084	.	+	.	source_gene_common_name=USP9YP36;source_gene=ENSG00000229709.1;gene_id=HG00140_ch_G0000660;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP36;gene_sources=liftoff;ID=HG00140_ch_G0000660;Name=USP9YP36
HG00140_chrY_random0000005	CAT	transcript	2052430	2061084	1000	+	.	source_transcript=ENST00000424581.1;source_transcript_name=USP9YP36-201;source_gene=ENSG00000229709.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229709.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424581.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424581.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP36;transcript_id=HG00140_ch_T0001790;gene_id=HG00140_ch_G0000660;Parent=HG00140_ch_G0000660;transcript_name=HG00140_ch_T0001790;gene_name=USP9YP36;ID=HG00140_ch_T0001790;Name=USP9YP36
HG00140_chrY_random0000005	CAT	exon	2052430	2052635	.	+	.	source_transcript=ENST00000424581.1;source_transcript_name=USP9YP36-201;source_gene=ENSG00000229709.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229709.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424581.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424581.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP36;transcript_id=HG00140_ch_T0001790;gene_id=HG00140_ch_G0000660;Parent=HG00140_ch_T0001790;transcript_name=HG00140_ch_T0001790;gene_name=USP9YP36;ID=exon:HG00140_ch_T0001790:0;Name=USP9YP36;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2052636	2054798	.	+	.	source_transcript=ENST00000424581.1;source_transcript_name=USP9YP36-201;source_gene=ENSG00000229709.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229709.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424581.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424581.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP36;transcript_id=HG00140_ch_T0001790;gene_id=HG00140_ch_G0000660;Parent=HG00140_ch_T0001790;transcript_name=HG00140_ch_T0001790;gene_name=USP9YP36;ID=intron:HG00140_ch_T0001790:0;Name=USP9YP36;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2054799	2055022	.	+	.	source_transcript=ENST00000424581.1;source_transcript_name=USP9YP36-201;source_gene=ENSG00000229709.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229709.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424581.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424581.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP36;transcript_id=HG00140_ch_T0001790;gene_id=HG00140_ch_G0000660;Parent=HG00140_ch_T0001790;transcript_name=HG00140_ch_T0001790;gene_name=USP9YP36;ID=exon:HG00140_ch_T0001790:1;Name=USP9YP36;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2055023	2056826	.	+	.	source_transcript=ENST00000424581.1;source_transcript_name=USP9YP36-201;source_gene=ENSG00000229709.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229709.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424581.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424581.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP36;transcript_id=HG00140_ch_T0001790;gene_id=HG00140_ch_G0000660;Parent=HG00140_ch_T0001790;transcript_name=HG00140_ch_T0001790;gene_name=USP9YP36;ID=intron:HG00140_ch_T0001790:1;Name=USP9YP36;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2056827	2057005	.	+	.	source_transcript=ENST00000424581.1;source_transcript_name=USP9YP36-201;source_gene=ENSG00000229709.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229709.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424581.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424581.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP36;transcript_id=HG00140_ch_T0001790;gene_id=HG00140_ch_G0000660;Parent=HG00140_ch_T0001790;transcript_name=HG00140_ch_T0001790;gene_name=USP9YP36;ID=exon:HG00140_ch_T0001790:2;Name=USP9YP36;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2057006	2058817	.	+	.	source_transcript=ENST00000424581.1;source_transcript_name=USP9YP36-201;source_gene=ENSG00000229709.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229709.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424581.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424581.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP36;transcript_id=HG00140_ch_T0001790;gene_id=HG00140_ch_G0000660;Parent=HG00140_ch_T0001790;transcript_name=HG00140_ch_T0001790;gene_name=USP9YP36;ID=intron:HG00140_ch_T0001790:2;Name=USP9YP36;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2058818	2058907	.	+	.	source_transcript=ENST00000424581.1;source_transcript_name=USP9YP36-201;source_gene=ENSG00000229709.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229709.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424581.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424581.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP36;transcript_id=HG00140_ch_T0001790;gene_id=HG00140_ch_G0000660;Parent=HG00140_ch_T0001790;transcript_name=HG00140_ch_T0001790;gene_name=USP9YP36;ID=exon:HG00140_ch_T0001790:3;Name=USP9YP36;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2058908	2060954	.	+	.	source_transcript=ENST00000424581.1;source_transcript_name=USP9YP36-201;source_gene=ENSG00000229709.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229709.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424581.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424581.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP36;transcript_id=HG00140_ch_T0001790;gene_id=HG00140_ch_G0000660;Parent=HG00140_ch_T0001790;transcript_name=HG00140_ch_T0001790;gene_name=USP9YP36;ID=intron:HG00140_ch_T0001790:3;Name=USP9YP36;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2060955	2061084	.	+	.	source_transcript=ENST00000424581.1;source_transcript_name=USP9YP36-201;source_gene=ENSG00000229709.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229709.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000424581.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000424581.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP36;transcript_id=HG00140_ch_T0001790;gene_id=HG00140_ch_G0000660;Parent=HG00140_ch_T0001790;transcript_name=HG00140_ch_T0001790;gene_name=USP9YP36;ID=exon:HG00140_ch_T0001790:4;Name=USP9YP36;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	2062963	2064985	.	-	.	source_gene_common_name=USP9YP33;source_gene=ENSG00000232064.1;gene_id=HG00140_ch_G0000661;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP33;gene_sources=liftoff;ID=HG00140_ch_G0000661;Name=USP9YP33
HG00140_chrY_random0000005	CAT	transcript	2062963	2064985	1000	-	.	source_transcript=ENST00000412220.1;source_transcript_name=USP9YP33-201;source_gene=ENSG00000232064.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232064.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412220.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP33;transcript_id=HG00140_ch_T0001791;gene_id=HG00140_ch_G0000661;Parent=HG00140_ch_G0000661;transcript_name=HG00140_ch_T0001791;gene_name=USP9YP33;ID=HG00140_ch_T0001791;Name=USP9YP33
HG00140_chrY_random0000005	CAT	exon	2062963	2063153	.	-	.	source_transcript=ENST00000412220.1;source_transcript_name=USP9YP33-201;source_gene=ENSG00000232064.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232064.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412220.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP33;transcript_id=HG00140_ch_T0001791;gene_id=HG00140_ch_G0000661;Parent=HG00140_ch_T0001791;transcript_name=HG00140_ch_T0001791;gene_name=USP9YP33;ID=exon:HG00140_ch_T0001791:0;Name=USP9YP33;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2063154	2064755	.	-	.	source_transcript=ENST00000412220.1;source_transcript_name=USP9YP33-201;source_gene=ENSG00000232064.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232064.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412220.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP33;transcript_id=HG00140_ch_T0001791;gene_id=HG00140_ch_G0000661;Parent=HG00140_ch_T0001791;transcript_name=HG00140_ch_T0001791;gene_name=USP9YP33;ID=intron:HG00140_ch_T0001791:0;Name=USP9YP33;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2064756	2064985	.	-	.	source_transcript=ENST00000412220.1;source_transcript_name=USP9YP33-201;source_gene=ENSG00000232064.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232064.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412220.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412220.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP33;transcript_id=HG00140_ch_T0001791;gene_id=HG00140_ch_G0000661;Parent=HG00140_ch_T0001791;transcript_name=HG00140_ch_T0001791;gene_name=USP9YP33;ID=exon:HG00140_ch_T0001791:1;Name=USP9YP33;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	2091290	2092899	.	+	.	source_gene_common_name=CDY20P;source_gene=ENSG00000225609.1;gene_id=HG00140_ch_G0000662;gene_biotype=unprocessed_pseudogene;gene_name=CDY20P;gene_sources=liftoff;ID=HG00140_ch_G0000662;Name=CDY20P
HG00140_chrY_random0000005	CAT	transcript	2091290	2092899	1000	+	.	source_transcript=ENST00000447528.1;source_transcript_name=CDY20P-201;source_gene=ENSG00000225609.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225609.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447528.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447528.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY20P;transcript_id=HG00140_ch_T0001792;gene_id=HG00140_ch_G0000662;Parent=HG00140_ch_G0000662;transcript_name=HG00140_ch_T0001792;gene_name=CDY20P;ID=HG00140_ch_T0001792;Name=CDY20P
HG00140_chrY_random0000005	CAT	exon	2091290	2091355	.	+	.	source_transcript=ENST00000447528.1;source_transcript_name=CDY20P-201;source_gene=ENSG00000225609.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225609.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447528.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY20P;transcript_id=HG00140_ch_T0001792;gene_id=HG00140_ch_G0000662;Parent=HG00140_ch_T0001792;transcript_name=HG00140_ch_T0001792;gene_name=CDY20P;ID=exon:HG00140_ch_T0001792:0;Name=CDY20P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2091356	2091686	.	+	.	source_transcript=ENST00000447528.1;source_transcript_name=CDY20P-201;source_gene=ENSG00000225609.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225609.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447528.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY20P;transcript_id=HG00140_ch_T0001792;gene_id=HG00140_ch_G0000662;Parent=HG00140_ch_T0001792;transcript_name=HG00140_ch_T0001792;gene_name=CDY20P;ID=intron:HG00140_ch_T0001792:0;Name=CDY20P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2091687	2092899	.	+	.	source_transcript=ENST00000447528.1;source_transcript_name=CDY20P-201;source_gene=ENSG00000225609.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225609.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000447528.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000447528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY20P;transcript_id=HG00140_ch_T0001792;gene_id=HG00140_ch_G0000662;Parent=HG00140_ch_T0001792;transcript_name=HG00140_ch_T0001792;gene_name=CDY20P;ID=exon:HG00140_ch_T0001792:1;Name=CDY20P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	2094763	2097548	.	+	.	source_gene_common_name=CDY1;source_gene=ENSG00000172288.8;gene_id=HG00140_ch_G0000663;gene_biotype=protein_coding;gene_name=CDY1;gene_sources=liftoff;ID=HG00140_ch_G0000663;Name=CDY1
HG00140_chrY_random0000005	CAT	transcript	2094763	2097548	9990	+	.	source_transcript=ENST00000306609.5;source_transcript_name=CDY1-201;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306609.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000306609.5;transcript_score=299.94;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG00140_ch_T0001793;gene_id=HG00140_ch_G0000663;Parent=HG00140_ch_G0000663;transcript_name=HG00140_ch_T0001793;gene_name=CDY1;ID=HG00140_ch_T0001793;Name=CDY1
HG00140_chrY_random0000005	CAT	exon	2094763	2096680	.	+	.	source_transcript=ENST00000306609.5;source_transcript_name=CDY1-201;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306609.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000306609.5;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG00140_ch_T0001793;gene_id=HG00140_ch_G0000663;Parent=HG00140_ch_T0001793;transcript_name=HG00140_ch_T0001793;gene_name=CDY1;ID=exon:HG00140_ch_T0001793:0;Name=CDY1;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	2095089	2096680	.	+	0	source_transcript=ENST00000306609.5;source_transcript_name=CDY1-201;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306609.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000306609.5;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG00140_ch_T0001793;gene_id=HG00140_ch_G0000663;Parent=HG00140_ch_T0001793;transcript_name=HG00140_ch_T0001793;gene_name=CDY1;ID=CDS:HG00140_ch_T0001793:0;Name=CDY1;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	start_codon	2095089	2095091	.	+	0	source_transcript=ENST00000306609.5;source_transcript_name=CDY1-201;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306609.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000306609.5;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG00140_ch_T0001793;gene_id=HG00140_ch_G0000663;Parent=HG00140_ch_T0001793;transcript_name=HG00140_ch_T0001793;gene_name=CDY1;ID=start_codon:HG00140_ch_T0001793;Name=CDY1;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2096681	2097100	.	+	.	source_transcript=ENST00000306609.5;source_transcript_name=CDY1-201;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306609.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000306609.5;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG00140_ch_T0001793;gene_id=HG00140_ch_G0000663;Parent=HG00140_ch_T0001793;transcript_name=HG00140_ch_T0001793;gene_name=CDY1;ID=intron:HG00140_ch_T0001793:0;Name=CDY1;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2097101	2097548	.	+	.	source_transcript=ENST00000306609.5;source_transcript_name=CDY1-201;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306609.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000306609.5;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG00140_ch_T0001793;gene_id=HG00140_ch_G0000663;Parent=HG00140_ch_T0001793;transcript_name=HG00140_ch_T0001793;gene_name=CDY1;ID=exon:HG00140_ch_T0001793:1;Name=CDY1;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	2097101	2097173	.	+	1	source_transcript=ENST00000306609.5;source_transcript_name=CDY1-201;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306609.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000306609.5;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG00140_ch_T0001793;gene_id=HG00140_ch_G0000663;Parent=HG00140_ch_T0001793;transcript_name=HG00140_ch_T0001793;gene_name=CDY1;ID=CDS:HG00140_ch_T0001793:1;Name=CDY1;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	stop_codon	2097171	2097173	.	+	0	source_transcript=ENST00000306609.5;source_transcript_name=CDY1-201;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000306609.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000306609.5;transcript_score=299.94;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG00140_ch_T0001793;gene_id=HG00140_ch_G0000663;Parent=HG00140_ch_T0001793;transcript_name=HG00140_ch_T0001793;gene_name=CDY1;ID=stop_codon:HG00140_ch_T0001793;Name=CDY1;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	2094808	2096984	9990	+	.	source_transcript=ENST00000361963.3;source_transcript_name=CDY1-202;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361963.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000361963.3;transcript_score=299.938;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG00140_ch_T0001794;gene_id=HG00140_ch_G0000663;Parent=HG00140_ch_G0000663;transcript_name=HG00140_ch_T0001794;gene_name=CDY1;ID=HG00140_ch_T0001794;Name=CDY1
HG00140_chrY_random0000005	CAT	exon	2094808	2096984	.	+	.	source_transcript=ENST00000361963.3;source_transcript_name=CDY1-202;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361963.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000361963.3;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG00140_ch_T0001794;gene_id=HG00140_ch_G0000663;Parent=HG00140_ch_T0001794;transcript_name=HG00140_ch_T0001794;gene_name=CDY1;ID=exon:HG00140_ch_T0001794:0;Name=CDY1;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	CDS	2095089	2096711	.	+	0	source_transcript=ENST00000361963.3;source_transcript_name=CDY1-202;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361963.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000361963.3;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG00140_ch_T0001794;gene_id=HG00140_ch_G0000663;Parent=HG00140_ch_T0001794;transcript_name=HG00140_ch_T0001794;gene_name=CDY1;ID=CDS:HG00140_ch_T0001794:0;Name=CDY1;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	start_codon	2095089	2095091	.	+	0	source_transcript=ENST00000361963.3;source_transcript_name=CDY1-202;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361963.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000361963.3;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG00140_ch_T0001794;gene_id=HG00140_ch_G0000663;Parent=HG00140_ch_T0001794;transcript_name=HG00140_ch_T0001794;gene_name=CDY1;ID=start_codon:HG00140_ch_T0001794;Name=CDY1;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	stop_codon	2096709	2096711	.	+	0	source_transcript=ENST00000361963.3;source_transcript_name=CDY1-202;source_gene=ENSG00000172288.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000172288.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000361963.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000361963.3;transcript_score=299.938;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG00140_ch_T0001794;gene_id=HG00140_ch_G0000663;Parent=HG00140_ch_T0001794;transcript_name=HG00140_ch_T0001794;gene_name=CDY1;ID=stop_codon:HG00140_ch_T0001794;Name=CDY1;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	2135543	2135869	.	+	.	source_gene_common_name=ELOCP10;source_gene=ENSG00000234081.1;gene_id=HG00140_ch_G0000664;gene_biotype=processed_pseudogene;gene_name=ELOCP10;gene_sources=liftoff;ID=HG00140_ch_G0000664;Name=ELOCP10
HG00140_chrY_random0000005	CAT	transcript	2135543	2135869	1000	+	.	source_transcript=ENST00000440624.1;source_transcript_name=ELOCP10-201;source_gene=ENSG00000234081.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234081.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000440624.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440624.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP10;transcript_id=HG00140_ch_T0001795;gene_id=HG00140_ch_G0000664;Parent=HG00140_ch_G0000664;transcript_name=HG00140_ch_T0001795;gene_name=ELOCP10;ID=HG00140_ch_T0001795;Name=ELOCP10
HG00140_chrY_random0000005	CAT	exon	2135543	2135869	.	+	.	source_transcript=ENST00000440624.1;source_transcript_name=ELOCP10-201;source_gene=ENSG00000234081.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000234081.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000440624.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440624.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP10;transcript_id=HG00140_ch_T0001795;gene_id=HG00140_ch_G0000664;Parent=HG00140_ch_T0001795;transcript_name=HG00140_ch_T0001795;gene_name=ELOCP10;ID=exon:HG00140_ch_T0001795:0;Name=ELOCP10;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	2147703	2169993	.	-	.	source_gene_common_name=OFD1P12Y;source_gene=ENSG00000232585.1;gene_id=HG00140_ch_G0000665;gene_biotype=unprocessed_pseudogene;gene_name=OFD1P12Y;gene_sources=liftoff;ID=HG00140_ch_G0000665;Name=OFD1P12Y
HG00140_chrY_random0000005	CAT	transcript	2147703	2169993	1000	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=HG00140_ch_T0001796;gene_id=HG00140_ch_G0000665;Parent=HG00140_ch_G0000665;transcript_name=HG00140_ch_T0001796;gene_name=OFD1P12Y;ID=HG00140_ch_T0001796;Name=OFD1P12Y
HG00140_chrY_random0000005	CAT	exon	2147703	2147851	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=HG00140_ch_T0001796;gene_id=HG00140_ch_G0000665;Parent=HG00140_ch_T0001796;transcript_name=HG00140_ch_T0001796;gene_name=OFD1P12Y;ID=exon:HG00140_ch_T0001796:0;Name=OFD1P12Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2147852	2149465	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=HG00140_ch_T0001796;gene_id=HG00140_ch_G0000665;Parent=HG00140_ch_T0001796;transcript_name=HG00140_ch_T0001796;gene_name=OFD1P12Y;ID=intron:HG00140_ch_T0001796:0;Name=OFD1P12Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2149466	2149557	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=HG00140_ch_T0001796;gene_id=HG00140_ch_G0000665;Parent=HG00140_ch_T0001796;transcript_name=HG00140_ch_T0001796;gene_name=OFD1P12Y;ID=exon:HG00140_ch_T0001796:1;Name=OFD1P12Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2149558	2150662	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=HG00140_ch_T0001796;gene_id=HG00140_ch_G0000665;Parent=HG00140_ch_T0001796;transcript_name=HG00140_ch_T0001796;gene_name=OFD1P12Y;ID=intron:HG00140_ch_T0001796:1;Name=OFD1P12Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2150663	2150736	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=HG00140_ch_T0001796;gene_id=HG00140_ch_G0000665;Parent=HG00140_ch_T0001796;transcript_name=HG00140_ch_T0001796;gene_name=OFD1P12Y;ID=exon:HG00140_ch_T0001796:2;Name=OFD1P12Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2150737	2152512	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=HG00140_ch_T0001796;gene_id=HG00140_ch_G0000665;Parent=HG00140_ch_T0001796;transcript_name=HG00140_ch_T0001796;gene_name=OFD1P12Y;ID=intron:HG00140_ch_T0001796:2;Name=OFD1P12Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2152513	2152625	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=HG00140_ch_T0001796;gene_id=HG00140_ch_G0000665;Parent=HG00140_ch_T0001796;transcript_name=HG00140_ch_T0001796;gene_name=OFD1P12Y;ID=exon:HG00140_ch_T0001796:3;Name=OFD1P12Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2152626	2154732	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=HG00140_ch_T0001796;gene_id=HG00140_ch_G0000665;Parent=HG00140_ch_T0001796;transcript_name=HG00140_ch_T0001796;gene_name=OFD1P12Y;ID=intron:HG00140_ch_T0001796:3;Name=OFD1P12Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2154733	2154841	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=HG00140_ch_T0001796;gene_id=HG00140_ch_G0000665;Parent=HG00140_ch_T0001796;transcript_name=HG00140_ch_T0001796;gene_name=OFD1P12Y;ID=exon:HG00140_ch_T0001796:4;Name=OFD1P12Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2154842	2157885	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=HG00140_ch_T0001796;gene_id=HG00140_ch_G0000665;Parent=HG00140_ch_T0001796;transcript_name=HG00140_ch_T0001796;gene_name=OFD1P12Y;ID=intron:HG00140_ch_T0001796:4;Name=OFD1P12Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2157886	2158021	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=HG00140_ch_T0001796;gene_id=HG00140_ch_G0000665;Parent=HG00140_ch_T0001796;transcript_name=HG00140_ch_T0001796;gene_name=OFD1P12Y;ID=exon:HG00140_ch_T0001796:5;Name=OFD1P12Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2158022	2158359	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=HG00140_ch_T0001796;gene_id=HG00140_ch_G0000665;Parent=HG00140_ch_T0001796;transcript_name=HG00140_ch_T0001796;gene_name=OFD1P12Y;ID=intron:HG00140_ch_T0001796:5;Name=OFD1P12Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2158360	2158493	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=HG00140_ch_T0001796;gene_id=HG00140_ch_G0000665;Parent=HG00140_ch_T0001796;transcript_name=HG00140_ch_T0001796;gene_name=OFD1P12Y;ID=exon:HG00140_ch_T0001796:6;Name=OFD1P12Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2158494	2165997	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=HG00140_ch_T0001796;gene_id=HG00140_ch_G0000665;Parent=HG00140_ch_T0001796;transcript_name=HG00140_ch_T0001796;gene_name=OFD1P12Y;ID=intron:HG00140_ch_T0001796:6;Name=OFD1P12Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2165998	2166030	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=HG00140_ch_T0001796;gene_id=HG00140_ch_G0000665;Parent=HG00140_ch_T0001796;transcript_name=HG00140_ch_T0001796;gene_name=OFD1P12Y;ID=exon:HG00140_ch_T0001796:7;Name=OFD1P12Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2166031	2166115	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=HG00140_ch_T0001796;gene_id=HG00140_ch_G0000665;Parent=HG00140_ch_T0001796;transcript_name=HG00140_ch_T0001796;gene_name=OFD1P12Y;ID=intron:HG00140_ch_T0001796:7;Name=OFD1P12Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2166116	2166183	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=HG00140_ch_T0001796;gene_id=HG00140_ch_G0000665;Parent=HG00140_ch_T0001796;transcript_name=HG00140_ch_T0001796;gene_name=OFD1P12Y;ID=exon:HG00140_ch_T0001796:8;Name=OFD1P12Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2166184	2168391	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=HG00140_ch_T0001796;gene_id=HG00140_ch_G0000665;Parent=HG00140_ch_T0001796;transcript_name=HG00140_ch_T0001796;gene_name=OFD1P12Y;ID=intron:HG00140_ch_T0001796:8;Name=OFD1P12Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2168392	2168591	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=HG00140_ch_T0001796;gene_id=HG00140_ch_G0000665;Parent=HG00140_ch_T0001796;transcript_name=HG00140_ch_T0001796;gene_name=OFD1P12Y;ID=exon:HG00140_ch_T0001796:9;Name=OFD1P12Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2168592	2169894	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=HG00140_ch_T0001796;gene_id=HG00140_ch_G0000665;Parent=HG00140_ch_T0001796;transcript_name=HG00140_ch_T0001796;gene_name=OFD1P12Y;ID=intron:HG00140_ch_T0001796:9;Name=OFD1P12Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2169895	2169993	.	-	.	source_transcript=ENST00000427963.1;source_transcript_name=OFD1P12Y-201;source_gene=ENSG00000232585.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232585.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000427963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000427963.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P12Y;transcript_id=HG00140_ch_T0001796;gene_id=HG00140_ch_G0000665;Parent=HG00140_ch_T0001796;transcript_name=HG00140_ch_T0001796;gene_name=OFD1P12Y;ID=exon:HG00140_ch_T0001796:10;Name=OFD1P12Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	2172098	2175209	.	+	.	source_gene_common_name=TRAPPC2P5;source_gene=ENSG00000225256.1;gene_id=HG00140_ch_G0000666;gene_biotype=unprocessed_pseudogene;gene_name=TRAPPC2P5;gene_sources=liftoff;ID=HG00140_ch_G0000666;Name=TRAPPC2P5
HG00140_chrY_random0000005	CAT	transcript	2172098	2175209	1000	+	.	source_transcript=ENST00000426293.1;source_transcript_name=TRAPPC2P5-201;source_gene=ENSG00000225256.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225256.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426293.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P5;transcript_id=HG00140_ch_T0001797;gene_id=HG00140_ch_G0000666;Parent=HG00140_ch_G0000666;transcript_name=HG00140_ch_T0001797;gene_name=TRAPPC2P5;ID=HG00140_ch_T0001797;Name=TRAPPC2P5
HG00140_chrY_random0000005	CAT	exon	2172098	2172190	.	+	.	source_transcript=ENST00000426293.1;source_transcript_name=TRAPPC2P5-201;source_gene=ENSG00000225256.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225256.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426293.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P5;transcript_id=HG00140_ch_T0001797;gene_id=HG00140_ch_G0000666;Parent=HG00140_ch_T0001797;transcript_name=HG00140_ch_T0001797;gene_name=TRAPPC2P5;ID=exon:HG00140_ch_T0001797:0;Name=TRAPPC2P5;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2172191	2174553	.	+	.	source_transcript=ENST00000426293.1;source_transcript_name=TRAPPC2P5-201;source_gene=ENSG00000225256.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225256.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426293.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P5;transcript_id=HG00140_ch_T0001797;gene_id=HG00140_ch_G0000666;Parent=HG00140_ch_T0001797;transcript_name=HG00140_ch_T0001797;gene_name=TRAPPC2P5;ID=intron:HG00140_ch_T0001797:0;Name=TRAPPC2P5;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2174554	2174688	.	+	.	source_transcript=ENST00000426293.1;source_transcript_name=TRAPPC2P5-201;source_gene=ENSG00000225256.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225256.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426293.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P5;transcript_id=HG00140_ch_T0001797;gene_id=HG00140_ch_G0000666;Parent=HG00140_ch_T0001797;transcript_name=HG00140_ch_T0001797;gene_name=TRAPPC2P5;ID=exon:HG00140_ch_T0001797:1;Name=TRAPPC2P5;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2174689	2175129	.	+	.	source_transcript=ENST00000426293.1;source_transcript_name=TRAPPC2P5-201;source_gene=ENSG00000225256.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225256.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426293.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P5;transcript_id=HG00140_ch_T0001797;gene_id=HG00140_ch_G0000666;Parent=HG00140_ch_T0001797;transcript_name=HG00140_ch_T0001797;gene_name=TRAPPC2P5;ID=intron:HG00140_ch_T0001797:1;Name=TRAPPC2P5;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2175130	2175209	.	+	.	source_transcript=ENST00000426293.1;source_transcript_name=TRAPPC2P5-201;source_gene=ENSG00000225256.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225256.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000426293.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000426293.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P5;transcript_id=HG00140_ch_T0001797;gene_id=HG00140_ch_G0000666;Parent=HG00140_ch_T0001797;transcript_name=HG00140_ch_T0001797;gene_name=TRAPPC2P5;ID=exon:HG00140_ch_T0001797:2;Name=TRAPPC2P5;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	2182555	2186204	.	-	.	source_gene_common_name=RAB9AP2;source_gene=ENSG00000223856.1;alternative_source_transcripts=ENST00000443911.1;gene_id=HG00140_ch_G0000667;gene_biotype=unprocessed_pseudogene;gene_name=RAB9AP2;gene_sources=liftoff;ID=HG00140_ch_G0000667;Name=RAB9AP2
HG00140_chrY_random0000005	CAT	transcript	2182555	2186204	1000	-	.	source_transcript=ENST00000443911.1;source_transcript_name=RAB9AP2-201;source_gene=ENSG00000223856.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223856.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443911.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443911.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP2;alternative_source_transcripts=ENST00000443911.1;transcript_id=HG00140_ch_T0001798;gene_id=HG00140_ch_G0000667;Parent=HG00140_ch_G0000667;transcript_name=HG00140_ch_T0001798;gene_name=RAB9AP2;ID=HG00140_ch_T0001798;Name=RAB9AP2
HG00140_chrY_random0000005	CAT	exon	2182555	2182917	.	-	.	source_transcript=ENST00000443911.1;source_transcript_name=RAB9AP2-201;source_gene=ENSG00000223856.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223856.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443911.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443911.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP2;alternative_source_transcripts=ENST00000443911.1;transcript_id=HG00140_ch_T0001798;gene_id=HG00140_ch_G0000667;Parent=HG00140_ch_T0001798;transcript_name=HG00140_ch_T0001798;gene_name=RAB9AP2;ID=exon:HG00140_ch_T0001798:0;Name=RAB9AP2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2182918	2185970	.	-	.	source_transcript=ENST00000443911.1;source_transcript_name=RAB9AP2-201;source_gene=ENSG00000223856.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223856.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443911.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443911.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP2;alternative_source_transcripts=ENST00000443911.1;transcript_id=HG00140_ch_T0001798;gene_id=HG00140_ch_G0000667;Parent=HG00140_ch_T0001798;transcript_name=HG00140_ch_T0001798;gene_name=RAB9AP2;ID=intron:HG00140_ch_T0001798:0;Name=RAB9AP2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2185971	2186204	.	-	.	source_transcript=ENST00000443911.1;source_transcript_name=RAB9AP2-201;source_gene=ENSG00000223856.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223856.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443911.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443911.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP2;alternative_source_transcripts=ENST00000443911.1;transcript_id=HG00140_ch_T0001798;gene_id=HG00140_ch_G0000667;Parent=HG00140_ch_T0001798;transcript_name=HG00140_ch_T0001798;gene_name=RAB9AP2;ID=exon:HG00140_ch_T0001798:1;Name=RAB9AP2;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	2195668	2196838	.	+	.	source_gene_common_name=USP9YP30;source_gene=ENSG00000235004.1;alternative_source_transcripts=ENST00000430729.1;gene_id=HG00140_ch_G0000668;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP30;gene_sources=liftoff;ID=HG00140_ch_G0000668;Name=USP9YP30
HG00140_chrY_random0000005	CAT	transcript	2195668	2196838	1000	+	.	source_transcript=ENST00000430729.1;source_transcript_name=USP9YP30-201;source_gene=ENSG00000235004.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235004.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430729.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP30;alternative_source_transcripts=ENST00000430729.1;transcript_id=HG00140_ch_T0001799;gene_id=HG00140_ch_G0000668;Parent=HG00140_ch_G0000668;transcript_name=HG00140_ch_T0001799;gene_name=USP9YP30;ID=HG00140_ch_T0001799;Name=USP9YP30
HG00140_chrY_random0000005	CAT	exon	2195668	2195833	.	+	.	source_transcript=ENST00000430729.1;source_transcript_name=USP9YP30-201;source_gene=ENSG00000235004.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235004.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP30;alternative_source_transcripts=ENST00000430729.1;transcript_id=HG00140_ch_T0001799;gene_id=HG00140_ch_G0000668;Parent=HG00140_ch_T0001799;transcript_name=HG00140_ch_T0001799;gene_name=USP9YP30;ID=exon:HG00140_ch_T0001799:0;Name=USP9YP30;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2195834	2196168	.	+	.	source_transcript=ENST00000430729.1;source_transcript_name=USP9YP30-201;source_gene=ENSG00000235004.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235004.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP30;alternative_source_transcripts=ENST00000430729.1;transcript_id=HG00140_ch_T0001799;gene_id=HG00140_ch_G0000668;Parent=HG00140_ch_T0001799;transcript_name=HG00140_ch_T0001799;gene_name=USP9YP30;ID=intron:HG00140_ch_T0001799:0;Name=USP9YP30;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2196169	2196362	.	+	.	source_transcript=ENST00000430729.1;source_transcript_name=USP9YP30-201;source_gene=ENSG00000235004.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235004.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP30;alternative_source_transcripts=ENST00000430729.1;transcript_id=HG00140_ch_T0001799;gene_id=HG00140_ch_G0000668;Parent=HG00140_ch_T0001799;transcript_name=HG00140_ch_T0001799;gene_name=USP9YP30;ID=exon:HG00140_ch_T0001799:1;Name=USP9YP30;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2196363	2196743	.	+	.	source_transcript=ENST00000430729.1;source_transcript_name=USP9YP30-201;source_gene=ENSG00000235004.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235004.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP30;alternative_source_transcripts=ENST00000430729.1;transcript_id=HG00140_ch_T0001799;gene_id=HG00140_ch_G0000668;Parent=HG00140_ch_T0001799;transcript_name=HG00140_ch_T0001799;gene_name=USP9YP30;ID=intron:HG00140_ch_T0001799:1;Name=USP9YP30;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2196744	2196838	.	+	.	source_transcript=ENST00000430729.1;source_transcript_name=USP9YP30-201;source_gene=ENSG00000235004.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235004.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430729.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430729.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP30;alternative_source_transcripts=ENST00000430729.1;transcript_id=HG00140_ch_T0001799;gene_id=HG00140_ch_G0000668;Parent=HG00140_ch_T0001799;transcript_name=HG00140_ch_T0001799;gene_name=USP9YP30;ID=exon:HG00140_ch_T0001799:2;Name=USP9YP30;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	2195994	2196147	.	+	.	source_gene_common_name=RNU1-107P;source_gene=ENSG00000252426.1;gene_id=HG00140_ch_G0000669;gene_biotype=snRNA;gene_name=RNU1-107P;gene_sources=liftoff;ID=HG00140_ch_G0000669;Name=RNU1-107P
HG00140_chrY_random0000005	CAT	transcript	2195994	2196147	1000	+	.	source_transcript=ENST00000516617.1;source_transcript_name=RNU1-107P-201;source_gene=ENSG00000252426.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252426.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516617.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-107P;transcript_id=HG00140_ch_T0001800;gene_id=HG00140_ch_G0000669;Parent=HG00140_ch_G0000669;transcript_name=HG00140_ch_T0001800;gene_name=RNU1-107P;ID=HG00140_ch_T0001800;Name=RNU1-107P
HG00140_chrY_random0000005	CAT	exon	2195994	2196147	.	+	.	source_transcript=ENST00000516617.1;source_transcript_name=RNU1-107P-201;source_gene=ENSG00000252426.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252426.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516617.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-107P;transcript_id=HG00140_ch_T0001800;gene_id=HG00140_ch_G0000669;Parent=HG00140_ch_T0001800;transcript_name=HG00140_ch_T0001800;gene_name=RNU1-107P;ID=exon:HG00140_ch_T0001800:0;Name=RNU1-107P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	2201144	2206039	.	+	.	source_gene_common_name=TTTY3;source_gene=ENSG00000231141.1;gene_id=HG00140_ch_G0000670;gene_biotype=lncRNA;gene_name=TTTY3;gene_sources=liftoff;ID=HG00140_ch_G0000670;Name=TTTY3
HG00140_chrY_random0000005	CAT	transcript	2201144	2206039	1000	+	.	source_transcript=ENST00000417334.1;source_transcript_name=TTTY3-201;source_gene=ENSG00000231141.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231141.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417334.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;transcript_id=HG00140_ch_T0001801;gene_id=HG00140_ch_G0000670;Parent=HG00140_ch_G0000670;transcript_name=HG00140_ch_T0001801;gene_name=TTTY3;ID=HG00140_ch_T0001801;Name=TTTY3
HG00140_chrY_random0000005	CAT	exon	2201144	2201247	.	+	.	source_transcript=ENST00000417334.1;source_transcript_name=TTTY3-201;source_gene=ENSG00000231141.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231141.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;transcript_id=HG00140_ch_T0001801;gene_id=HG00140_ch_G0000670;Parent=HG00140_ch_T0001801;transcript_name=HG00140_ch_T0001801;gene_name=TTTY3;ID=exon:HG00140_ch_T0001801:0;Name=TTTY3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2201248	2203445	.	+	.	source_transcript=ENST00000417334.1;source_transcript_name=TTTY3-201;source_gene=ENSG00000231141.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231141.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;transcript_id=HG00140_ch_T0001801;gene_id=HG00140_ch_G0000670;Parent=HG00140_ch_T0001801;transcript_name=HG00140_ch_T0001801;gene_name=TTTY3;ID=intron:HG00140_ch_T0001801:0;Name=TTTY3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2203446	2203580	.	+	.	source_transcript=ENST00000417334.1;source_transcript_name=TTTY3-201;source_gene=ENSG00000231141.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231141.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;transcript_id=HG00140_ch_T0001801;gene_id=HG00140_ch_G0000670;Parent=HG00140_ch_T0001801;transcript_name=HG00140_ch_T0001801;gene_name=TTTY3;ID=exon:HG00140_ch_T0001801:1;Name=TTTY3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2203581	2205934	.	+	.	source_transcript=ENST00000417334.1;source_transcript_name=TTTY3-201;source_gene=ENSG00000231141.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231141.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;transcript_id=HG00140_ch_T0001801;gene_id=HG00140_ch_G0000670;Parent=HG00140_ch_T0001801;transcript_name=HG00140_ch_T0001801;gene_name=TTTY3;ID=intron:HG00140_ch_T0001801:1;Name=TTTY3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2205935	2206039	.	+	.	source_transcript=ENST00000417334.1;source_transcript_name=TTTY3-201;source_gene=ENSG00000231141.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000231141.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000417334.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000417334.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;transcript_id=HG00140_ch_T0001801;gene_id=HG00140_ch_G0000670;Parent=HG00140_ch_T0001801;transcript_name=HG00140_ch_T0001801;gene_name=TTTY3;ID=exon:HG00140_ch_T0001801:2;Name=TTTY3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	2202665	2207811	.	-	.	source_gene_common_name=USP9YP9;source_gene=ENSG00000232614.1;gene_id=HG00140_ch_G0000671;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP9;gene_sources=liftoff;ID=HG00140_ch_G0000671;Name=USP9YP9
HG00140_chrY_random0000005	CAT	transcript	2202665	2207811	1000	-	.	source_transcript=ENST00000429406.1;source_transcript_name=USP9YP9-201;source_gene=ENSG00000232614.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232614.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429406.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429406.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP9;transcript_id=HG00140_ch_T0001802;gene_id=HG00140_ch_G0000671;Parent=HG00140_ch_G0000671;transcript_name=HG00140_ch_T0001802;gene_name=USP9YP9;ID=HG00140_ch_T0001802;Name=USP9YP9
HG00140_chrY_random0000005	CAT	exon	2202665	2202857	.	-	.	source_transcript=ENST00000429406.1;source_transcript_name=USP9YP9-201;source_gene=ENSG00000232614.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232614.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429406.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429406.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP9;transcript_id=HG00140_ch_T0001802;gene_id=HG00140_ch_G0000671;Parent=HG00140_ch_T0001802;transcript_name=HG00140_ch_T0001802;gene_name=USP9YP9;ID=exon:HG00140_ch_T0001802:0;Name=USP9YP9;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2202858	2204490	.	-	.	source_transcript=ENST00000429406.1;source_transcript_name=USP9YP9-201;source_gene=ENSG00000232614.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232614.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429406.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429406.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP9;transcript_id=HG00140_ch_T0001802;gene_id=HG00140_ch_G0000671;Parent=HG00140_ch_T0001802;transcript_name=HG00140_ch_T0001802;gene_name=USP9YP9;ID=intron:HG00140_ch_T0001802:0;Name=USP9YP9;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2204491	2204753	.	-	.	source_transcript=ENST00000429406.1;source_transcript_name=USP9YP9-201;source_gene=ENSG00000232614.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232614.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429406.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429406.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP9;transcript_id=HG00140_ch_T0001802;gene_id=HG00140_ch_G0000671;Parent=HG00140_ch_T0001802;transcript_name=HG00140_ch_T0001802;gene_name=USP9YP9;ID=exon:HG00140_ch_T0001802:1;Name=USP9YP9;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2204754	2205877	.	-	.	source_transcript=ENST00000429406.1;source_transcript_name=USP9YP9-201;source_gene=ENSG00000232614.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232614.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429406.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429406.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP9;transcript_id=HG00140_ch_T0001802;gene_id=HG00140_ch_G0000671;Parent=HG00140_ch_T0001802;transcript_name=HG00140_ch_T0001802;gene_name=USP9YP9;ID=intron:HG00140_ch_T0001802:1;Name=USP9YP9;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2205878	2206099	.	-	.	source_transcript=ENST00000429406.1;source_transcript_name=USP9YP9-201;source_gene=ENSG00000232614.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232614.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429406.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429406.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP9;transcript_id=HG00140_ch_T0001802;gene_id=HG00140_ch_G0000671;Parent=HG00140_ch_T0001802;transcript_name=HG00140_ch_T0001802;gene_name=USP9YP9;ID=exon:HG00140_ch_T0001802:2;Name=USP9YP9;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2206100	2207774	.	-	.	source_transcript=ENST00000429406.1;source_transcript_name=USP9YP9-201;source_gene=ENSG00000232614.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232614.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429406.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429406.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP9;transcript_id=HG00140_ch_T0001802;gene_id=HG00140_ch_G0000671;Parent=HG00140_ch_T0001802;transcript_name=HG00140_ch_T0001802;gene_name=USP9YP9;ID=intron:HG00140_ch_T0001802:2;Name=USP9YP9;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2207775	2207811	.	-	.	source_transcript=ENST00000429406.1;source_transcript_name=USP9YP9-201;source_gene=ENSG00000232614.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232614.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429406.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429406.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP9;transcript_id=HG00140_ch_T0001802;gene_id=HG00140_ch_G0000671;Parent=HG00140_ch_T0001802;transcript_name=HG00140_ch_T0001802;gene_name=USP9YP9;ID=exon:HG00140_ch_T0001802:3;Name=USP9YP9;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	2221239	2222850	.	-	.	source_gene_common_name=USP9YP19;source_gene=ENSG00000225326.1;gene_id=HG00140_ch_G0000672;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP19;gene_sources=liftoff;ID=HG00140_ch_G0000672;Name=USP9YP19
HG00140_chrY_random0000005	CAT	transcript	2221239	2222850	1000	-	.	source_transcript=ENST00000412165.1;source_transcript_name=USP9YP19-201;source_gene=ENSG00000225326.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225326.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412165.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP19;transcript_id=HG00140_ch_T0001803;gene_id=HG00140_ch_G0000672;Parent=HG00140_ch_G0000672;transcript_name=HG00140_ch_T0001803;gene_name=USP9YP19;ID=HG00140_ch_T0001803;Name=USP9YP19
HG00140_chrY_random0000005	CAT	exon	2221239	2221505	.	-	.	source_transcript=ENST00000412165.1;source_transcript_name=USP9YP19-201;source_gene=ENSG00000225326.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225326.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412165.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP19;transcript_id=HG00140_ch_T0001803;gene_id=HG00140_ch_G0000672;Parent=HG00140_ch_T0001803;transcript_name=HG00140_ch_T0001803;gene_name=USP9YP19;ID=exon:HG00140_ch_T0001803:0;Name=USP9YP19;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2221506	2222632	.	-	.	source_transcript=ENST00000412165.1;source_transcript_name=USP9YP19-201;source_gene=ENSG00000225326.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225326.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412165.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP19;transcript_id=HG00140_ch_T0001803;gene_id=HG00140_ch_G0000672;Parent=HG00140_ch_T0001803;transcript_name=HG00140_ch_T0001803;gene_name=USP9YP19;ID=intron:HG00140_ch_T0001803:0;Name=USP9YP19;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2222633	2222850	.	-	.	source_transcript=ENST00000412165.1;source_transcript_name=USP9YP19-201;source_gene=ENSG00000225326.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225326.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000412165.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412165.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP19;transcript_id=HG00140_ch_T0001803;gene_id=HG00140_ch_G0000672;Parent=HG00140_ch_T0001803;transcript_name=HG00140_ch_T0001803;gene_name=USP9YP19;ID=exon:HG00140_ch_T0001803:1;Name=USP9YP19;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	2225032	2225514	.	+	.	source_gene_common_name=XKRYP5;source_gene=ENSG00000223406.1;gene_id=HG00140_ch_G0000673;gene_biotype=unprocessed_pseudogene;gene_name=XKRYP5;gene_sources=liftoff;ID=HG00140_ch_G0000673;Name=XKRYP5
HG00140_chrY_random0000005	CAT	transcript	2225032	2225514	1000	+	.	source_transcript=ENST00000449659.1;source_transcript_name=XKRYP5-201;source_gene=ENSG00000223406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449659.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP5;transcript_id=HG00140_ch_T0001804;gene_id=HG00140_ch_G0000673;Parent=HG00140_ch_G0000673;transcript_name=HG00140_ch_T0001804;gene_name=XKRYP5;ID=HG00140_ch_T0001804;Name=XKRYP5
HG00140_chrY_random0000005	CAT	exon	2225032	2225514	.	+	.	source_transcript=ENST00000449659.1;source_transcript_name=XKRYP5-201;source_gene=ENSG00000223406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000449659.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000449659.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP5;transcript_id=HG00140_ch_T0001804;gene_id=HG00140_ch_G0000673;Parent=HG00140_ch_T0001804;transcript_name=HG00140_ch_T0001804;gene_name=XKRYP5;ID=exon:HG00140_ch_T0001804:0;Name=XKRYP5;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	2285669	2287222	.	+	.	source_gene_common_name=CDY22P;source_gene=ENSG00000229343.1;gene_id=HG00140_ch_G0000674;gene_biotype=unprocessed_pseudogene;gene_name=CDY22P;gene_sources=liftoff;ID=HG00140_ch_G0000674;Name=CDY22P
HG00140_chrY_random0000005	CAT	transcript	2285669	2287222	1000	+	.	source_transcript=ENST00000451423.1;source_transcript_name=CDY22P-201;source_gene=ENSG00000229343.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229343.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000451423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451423.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY22P;transcript_id=HG00140_ch_T0001805;gene_id=HG00140_ch_G0000674;Parent=HG00140_ch_G0000674;transcript_name=HG00140_ch_T0001805;gene_name=CDY22P;ID=HG00140_ch_T0001805;Name=CDY22P
HG00140_chrY_random0000005	CAT	exon	2285669	2287222	.	+	.	source_transcript=ENST00000451423.1;source_transcript_name=CDY22P-201;source_gene=ENSG00000229343.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229343.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000451423.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451423.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY22P;transcript_id=HG00140_ch_T0001805;gene_id=HG00140_ch_G0000674;Parent=HG00140_ch_T0001805;transcript_name=HG00140_ch_T0001805;gene_name=CDY22P;ID=exon:HG00140_ch_T0001805:0;Name=CDY22P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	2333593	2333918	.	+	.	source_gene_common_name=ELOCP17;source_gene=ENSG00000232695.1;gene_id=HG00140_ch_G0000675;gene_biotype=processed_pseudogene;gene_name=ELOCP17;gene_sources=liftoff;ID=HG00140_ch_G0000675;Name=ELOCP17
HG00140_chrY_random0000005	CAT	transcript	2333593	2333918	1000	+	.	source_transcript=ENST00000414751.1;source_transcript_name=ELOCP17-201;source_gene=ENSG00000232695.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232695.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000414751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414751.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP17;transcript_id=HG00140_ch_T0001806;gene_id=HG00140_ch_G0000675;Parent=HG00140_ch_G0000675;transcript_name=HG00140_ch_T0001806;gene_name=ELOCP17;ID=HG00140_ch_T0001806;Name=ELOCP17
HG00140_chrY_random0000005	CAT	exon	2333593	2333918	.	+	.	source_transcript=ENST00000414751.1;source_transcript_name=ELOCP17-201;source_gene=ENSG00000232695.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000232695.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000414751.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000414751.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP17;transcript_id=HG00140_ch_T0001806;gene_id=HG00140_ch_G0000675;Parent=HG00140_ch_T0001806;transcript_name=HG00140_ch_T0001806;gene_name=ELOCP17;ID=exon:HG00140_ch_T0001806:0;Name=ELOCP17;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	2344573	2371299	.	-	.	source_gene_common_name=OFD1P18Y;source_gene=ENSG00000235511.1;gene_id=HG00140_ch_G0000676;gene_biotype=unprocessed_pseudogene;gene_name=OFD1P18Y;gene_sources=liftoff;ID=HG00140_ch_G0000676;Name=OFD1P18Y
HG00140_chrY_random0000005	CAT	transcript	2344573	2371299	1000	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;transcript_id=HG00140_ch_T0001807;gene_id=HG00140_ch_G0000676;Parent=HG00140_ch_G0000676;transcript_name=HG00140_ch_T0001807;gene_name=OFD1P18Y;ID=HG00140_ch_T0001807;Name=OFD1P18Y
HG00140_chrY_random0000005	CAT	exon	2344573	2344644	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;transcript_id=HG00140_ch_T0001807;gene_id=HG00140_ch_G0000676;Parent=HG00140_ch_T0001807;transcript_name=HG00140_ch_T0001807;gene_name=OFD1P18Y;ID=exon:HG00140_ch_T0001807:0;Name=OFD1P18Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2344645	2345746	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;transcript_id=HG00140_ch_T0001807;gene_id=HG00140_ch_G0000676;Parent=HG00140_ch_T0001807;transcript_name=HG00140_ch_T0001807;gene_name=OFD1P18Y;ID=intron:HG00140_ch_T0001807:0;Name=OFD1P18Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2345747	2345820	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;transcript_id=HG00140_ch_T0001807;gene_id=HG00140_ch_G0000676;Parent=HG00140_ch_T0001807;transcript_name=HG00140_ch_T0001807;gene_name=OFD1P18Y;ID=exon:HG00140_ch_T0001807:1;Name=OFD1P18Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2345821	2347606	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;transcript_id=HG00140_ch_T0001807;gene_id=HG00140_ch_G0000676;Parent=HG00140_ch_T0001807;transcript_name=HG00140_ch_T0001807;gene_name=OFD1P18Y;ID=intron:HG00140_ch_T0001807:1;Name=OFD1P18Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2347607	2347725	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;transcript_id=HG00140_ch_T0001807;gene_id=HG00140_ch_G0000676;Parent=HG00140_ch_T0001807;transcript_name=HG00140_ch_T0001807;gene_name=OFD1P18Y;ID=exon:HG00140_ch_T0001807:2;Name=OFD1P18Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2347726	2350372	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;transcript_id=HG00140_ch_T0001807;gene_id=HG00140_ch_G0000676;Parent=HG00140_ch_T0001807;transcript_name=HG00140_ch_T0001807;gene_name=OFD1P18Y;ID=intron:HG00140_ch_T0001807:2;Name=OFD1P18Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2350373	2350478	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;transcript_id=HG00140_ch_T0001807;gene_id=HG00140_ch_G0000676;Parent=HG00140_ch_T0001807;transcript_name=HG00140_ch_T0001807;gene_name=OFD1P18Y;ID=exon:HG00140_ch_T0001807:3;Name=OFD1P18Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2350479	2353524	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;transcript_id=HG00140_ch_T0001807;gene_id=HG00140_ch_G0000676;Parent=HG00140_ch_T0001807;transcript_name=HG00140_ch_T0001807;gene_name=OFD1P18Y;ID=intron:HG00140_ch_T0001807:3;Name=OFD1P18Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2353525	2353672	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;transcript_id=HG00140_ch_T0001807;gene_id=HG00140_ch_G0000676;Parent=HG00140_ch_T0001807;transcript_name=HG00140_ch_T0001807;gene_name=OFD1P18Y;ID=exon:HG00140_ch_T0001807:4;Name=OFD1P18Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2353673	2354016	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;transcript_id=HG00140_ch_T0001807;gene_id=HG00140_ch_G0000676;Parent=HG00140_ch_T0001807;transcript_name=HG00140_ch_T0001807;gene_name=OFD1P18Y;ID=intron:HG00140_ch_T0001807:4;Name=OFD1P18Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2354017	2354151	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;transcript_id=HG00140_ch_T0001807;gene_id=HG00140_ch_G0000676;Parent=HG00140_ch_T0001807;transcript_name=HG00140_ch_T0001807;gene_name=OFD1P18Y;ID=exon:HG00140_ch_T0001807:5;Name=OFD1P18Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2354152	2369776	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;transcript_id=HG00140_ch_T0001807;gene_id=HG00140_ch_G0000676;Parent=HG00140_ch_T0001807;transcript_name=HG00140_ch_T0001807;gene_name=OFD1P18Y;ID=intron:HG00140_ch_T0001807:5;Name=OFD1P18Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2369777	2369982	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;transcript_id=HG00140_ch_T0001807;gene_id=HG00140_ch_G0000676;Parent=HG00140_ch_T0001807;transcript_name=HG00140_ch_T0001807;gene_name=OFD1P18Y;ID=exon:HG00140_ch_T0001807:6;Name=OFD1P18Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2369983	2371200	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;transcript_id=HG00140_ch_T0001807;gene_id=HG00140_ch_G0000676;Parent=HG00140_ch_T0001807;transcript_name=HG00140_ch_T0001807;gene_name=OFD1P18Y;ID=intron:HG00140_ch_T0001807:6;Name=OFD1P18Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2371201	2371299	.	-	.	source_transcript=ENST00000420889.1;source_transcript_name=OFD1P18Y-201;source_gene=ENSG00000235511.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235511.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P18Y;transcript_id=HG00140_ch_T0001807;gene_id=HG00140_ch_G0000676;Parent=HG00140_ch_T0001807;transcript_name=HG00140_ch_T0001807;gene_name=OFD1P18Y;ID=exon:HG00140_ch_T0001807:7;Name=OFD1P18Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	2377167	2379899	.	+	.	source_gene_common_name=TRAPPC2P4;source_gene=ENSG00000232914.1;gene_id=HG00140_ch_G0000677;gene_biotype=unprocessed_pseudogene;gene_name=TRAPPC2P4;gene_sources=liftoff;ID=HG00140_ch_G0000677;Name=TRAPPC2P4
HG00140_chrY_random0000005	CAT	transcript	2377167	2379899	1000	+	.	source_transcript=ENST00000421750.1;source_transcript_name=TRAPPC2P4-201;source_gene=ENSG00000232914.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232914.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421750.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P4;transcript_id=HG00140_ch_T0001808;gene_id=HG00140_ch_G0000677;Parent=HG00140_ch_G0000677;transcript_name=HG00140_ch_T0001808;gene_name=TRAPPC2P4;ID=HG00140_ch_T0001808;Name=TRAPPC2P4
HG00140_chrY_random0000005	CAT	exon	2377167	2377259	.	+	.	source_transcript=ENST00000421750.1;source_transcript_name=TRAPPC2P4-201;source_gene=ENSG00000232914.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232914.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P4;transcript_id=HG00140_ch_T0001808;gene_id=HG00140_ch_G0000677;Parent=HG00140_ch_T0001808;transcript_name=HG00140_ch_T0001808;gene_name=TRAPPC2P4;ID=exon:HG00140_ch_T0001808:0;Name=TRAPPC2P4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2377260	2379213	.	+	.	source_transcript=ENST00000421750.1;source_transcript_name=TRAPPC2P4-201;source_gene=ENSG00000232914.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232914.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P4;transcript_id=HG00140_ch_T0001808;gene_id=HG00140_ch_G0000677;Parent=HG00140_ch_T0001808;transcript_name=HG00140_ch_T0001808;gene_name=TRAPPC2P4;ID=intron:HG00140_ch_T0001808:0;Name=TRAPPC2P4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2379214	2379358	.	+	.	source_transcript=ENST00000421750.1;source_transcript_name=TRAPPC2P4-201;source_gene=ENSG00000232914.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232914.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P4;transcript_id=HG00140_ch_T0001808;gene_id=HG00140_ch_G0000677;Parent=HG00140_ch_T0001808;transcript_name=HG00140_ch_T0001808;gene_name=TRAPPC2P4;ID=exon:HG00140_ch_T0001808:1;Name=TRAPPC2P4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2379359	2379806	.	+	.	source_transcript=ENST00000421750.1;source_transcript_name=TRAPPC2P4-201;source_gene=ENSG00000232914.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232914.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P4;transcript_id=HG00140_ch_T0001808;gene_id=HG00140_ch_G0000677;Parent=HG00140_ch_T0001808;transcript_name=HG00140_ch_T0001808;gene_name=TRAPPC2P4;ID=intron:HG00140_ch_T0001808:1;Name=TRAPPC2P4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2379807	2379899	.	+	.	source_transcript=ENST00000421750.1;source_transcript_name=TRAPPC2P4-201;source_gene=ENSG00000232914.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232914.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421750.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421750.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P4;transcript_id=HG00140_ch_T0001808;gene_id=HG00140_ch_G0000677;Parent=HG00140_ch_T0001808;transcript_name=HG00140_ch_T0001808;gene_name=TRAPPC2P4;ID=exon:HG00140_ch_T0001808:2;Name=TRAPPC2P4;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	2390972	2391544	.	-	.	source_gene_common_name=RAB9AP3;source_gene=ENSG00000223655.1;alternative_source_transcripts=ENST00000449393.1;gene_id=HG00140_ch_G0000678;gene_biotype=processed_pseudogene;gene_name=RAB9AP3;gene_sources=liftoff;ID=HG00140_ch_G0000678;Name=RAB9AP3
HG00140_chrY_random0000005	CAT	transcript	2390972	2391544	1000	-	.	source_transcript=ENST00000412737.1;source_transcript_name=RAB9AP3-201;source_gene=ENSG00000223655.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000223655.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000412737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412737.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP3;alternative_source_transcripts=ENST00000449393.1;transcript_id=HG00140_ch_T0001809;gene_id=HG00140_ch_G0000678;Parent=HG00140_ch_G0000678;transcript_name=HG00140_ch_T0001809;gene_name=RAB9AP3;ID=HG00140_ch_T0001809;Name=RAB9AP3
HG00140_chrY_random0000005	CAT	exon	2390972	2391544	.	-	.	source_transcript=ENST00000412737.1;source_transcript_name=RAB9AP3-201;source_gene=ENSG00000223655.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000223655.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000412737.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000412737.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP3;alternative_source_transcripts=ENST00000449393.1;transcript_id=HG00140_ch_T0001809;gene_id=HG00140_ch_G0000678;Parent=HG00140_ch_T0001809;transcript_name=HG00140_ch_T0001809;gene_name=RAB9AP3;ID=exon:HG00140_ch_T0001809:0;Name=RAB9AP3;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	2396037	2402488	.	+	.	source_gene_common_name=USP9YP20;source_gene=ENSG00000230854.1;gene_id=HG00140_ch_G0000679;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP20;gene_sources=liftoff;ID=HG00140_ch_G0000679;Name=USP9YP20
HG00140_chrY_random0000005	CAT	transcript	2396037	2402488	1000	+	.	source_transcript=ENST00000419224.1;source_transcript_name=USP9YP20-201;source_gene=ENSG00000230854.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230854.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000419224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419224.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP20;transcript_id=HG00140_ch_T0001810;gene_id=HG00140_ch_G0000679;Parent=HG00140_ch_G0000679;transcript_name=HG00140_ch_T0001810;gene_name=USP9YP20;ID=HG00140_ch_T0001810;Name=USP9YP20
HG00140_chrY_random0000005	CAT	exon	2396037	2396168	.	+	.	source_transcript=ENST00000419224.1;source_transcript_name=USP9YP20-201;source_gene=ENSG00000230854.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230854.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000419224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419224.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP20;transcript_id=HG00140_ch_T0001810;gene_id=HG00140_ch_G0000679;Parent=HG00140_ch_T0001810;transcript_name=HG00140_ch_T0001810;gene_name=USP9YP20;ID=exon:HG00140_ch_T0001810:0;Name=USP9YP20;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2396169	2401323	.	+	.	source_transcript=ENST00000419224.1;source_transcript_name=USP9YP20-201;source_gene=ENSG00000230854.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230854.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000419224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419224.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP20;transcript_id=HG00140_ch_T0001810;gene_id=HG00140_ch_G0000679;Parent=HG00140_ch_T0001810;transcript_name=HG00140_ch_T0001810;gene_name=USP9YP20;ID=intron:HG00140_ch_T0001810:0;Name=USP9YP20;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2401324	2401461	.	+	.	source_transcript=ENST00000419224.1;source_transcript_name=USP9YP20-201;source_gene=ENSG00000230854.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230854.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000419224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419224.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP20;transcript_id=HG00140_ch_T0001810;gene_id=HG00140_ch_G0000679;Parent=HG00140_ch_T0001810;transcript_name=HG00140_ch_T0001810;gene_name=USP9YP20;ID=exon:HG00140_ch_T0001810:1;Name=USP9YP20;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2401462	2401604	.	+	.	source_transcript=ENST00000419224.1;source_transcript_name=USP9YP20-201;source_gene=ENSG00000230854.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230854.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000419224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419224.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP20;transcript_id=HG00140_ch_T0001810;gene_id=HG00140_ch_G0000679;Parent=HG00140_ch_T0001810;transcript_name=HG00140_ch_T0001810;gene_name=USP9YP20;ID=intron:HG00140_ch_T0001810:1;Name=USP9YP20;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2401605	2401641	.	+	.	source_transcript=ENST00000419224.1;source_transcript_name=USP9YP20-201;source_gene=ENSG00000230854.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230854.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000419224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419224.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP20;transcript_id=HG00140_ch_T0001810;gene_id=HG00140_ch_G0000679;Parent=HG00140_ch_T0001810;transcript_name=HG00140_ch_T0001810;gene_name=USP9YP20;ID=exon:HG00140_ch_T0001810:2;Name=USP9YP20;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2401642	2401855	.	+	.	source_transcript=ENST00000419224.1;source_transcript_name=USP9YP20-201;source_gene=ENSG00000230854.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230854.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000419224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419224.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP20;transcript_id=HG00140_ch_T0001810;gene_id=HG00140_ch_G0000679;Parent=HG00140_ch_T0001810;transcript_name=HG00140_ch_T0001810;gene_name=USP9YP20;ID=intron:HG00140_ch_T0001810:2;Name=USP9YP20;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2401856	2402013	.	+	.	source_transcript=ENST00000419224.1;source_transcript_name=USP9YP20-201;source_gene=ENSG00000230854.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230854.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000419224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419224.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP20;transcript_id=HG00140_ch_T0001810;gene_id=HG00140_ch_G0000679;Parent=HG00140_ch_T0001810;transcript_name=HG00140_ch_T0001810;gene_name=USP9YP20;ID=exon:HG00140_ch_T0001810:3;Name=USP9YP20;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2402014	2402395	.	+	.	source_transcript=ENST00000419224.1;source_transcript_name=USP9YP20-201;source_gene=ENSG00000230854.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230854.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000419224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419224.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP20;transcript_id=HG00140_ch_T0001810;gene_id=HG00140_ch_G0000679;Parent=HG00140_ch_T0001810;transcript_name=HG00140_ch_T0001810;gene_name=USP9YP20;ID=intron:HG00140_ch_T0001810:3;Name=USP9YP20;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2402396	2402488	.	+	.	source_transcript=ENST00000419224.1;source_transcript_name=USP9YP20-201;source_gene=ENSG00000230854.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000230854.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000419224.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000419224.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP20;transcript_id=HG00140_ch_T0001810;gene_id=HG00140_ch_G0000679;Parent=HG00140_ch_T0001810;transcript_name=HG00140_ch_T0001810;gene_name=USP9YP20;ID=exon:HG00140_ch_T0001810:4;Name=USP9YP20;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	2401641	2401804	.	+	.	source_gene_common_name=RNU1-40P;source_gene=ENSG00000252625.1;gene_id=HG00140_ch_G0000680;gene_biotype=snRNA;gene_name=RNU1-40P;gene_sources=liftoff;ID=HG00140_ch_G0000680;Name=RNU1-40P
HG00140_chrY_random0000005	CAT	transcript	2401641	2401804	1000	+	.	source_transcript=ENST00000516816.1;source_transcript_name=RNU1-40P-201;source_gene=ENSG00000252625.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252625.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516816.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-40P;transcript_id=HG00140_ch_T0001811;gene_id=HG00140_ch_G0000680;Parent=HG00140_ch_G0000680;transcript_name=HG00140_ch_T0001811;gene_name=RNU1-40P;ID=HG00140_ch_T0001811;Name=RNU1-40P
HG00140_chrY_random0000005	CAT	exon	2401641	2401804	.	+	.	source_transcript=ENST00000516816.1;source_transcript_name=RNU1-40P-201;source_gene=ENSG00000252625.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252625.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516816.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516816.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-40P;transcript_id=HG00140_ch_T0001811;gene_id=HG00140_ch_G0000680;Parent=HG00140_ch_T0001811;transcript_name=HG00140_ch_T0001811;gene_name=RNU1-40P;ID=exon:HG00140_ch_T0001811:0;Name=RNU1-40P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	2406510	2408558	.	-	.	source_gene_common_name=USP9YP21;source_gene=ENSG00000227635.1;gene_id=HG00140_ch_G0000681;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP21;gene_sources=liftoff;ID=HG00140_ch_G0000681;Name=USP9YP21
HG00140_chrY_random0000005	CAT	transcript	2406510	2408558	1000	-	.	source_transcript=ENST00000420603.1;source_transcript_name=USP9YP21-201;source_gene=ENSG00000227635.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227635.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420603.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420603.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP21;transcript_id=HG00140_ch_T0001812;gene_id=HG00140_ch_G0000681;Parent=HG00140_ch_G0000681;transcript_name=HG00140_ch_T0001812;gene_name=USP9YP21;ID=HG00140_ch_T0001812;Name=USP9YP21
HG00140_chrY_random0000005	CAT	exon	2406510	2406692	.	-	.	source_transcript=ENST00000420603.1;source_transcript_name=USP9YP21-201;source_gene=ENSG00000227635.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227635.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420603.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420603.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP21;transcript_id=HG00140_ch_T0001812;gene_id=HG00140_ch_G0000681;Parent=HG00140_ch_T0001812;transcript_name=HG00140_ch_T0001812;gene_name=USP9YP21;ID=exon:HG00140_ch_T0001812:0;Name=USP9YP21;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2406693	2408309	.	-	.	source_transcript=ENST00000420603.1;source_transcript_name=USP9YP21-201;source_gene=ENSG00000227635.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227635.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420603.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420603.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP21;transcript_id=HG00140_ch_T0001812;gene_id=HG00140_ch_G0000681;Parent=HG00140_ch_T0001812;transcript_name=HG00140_ch_T0001812;gene_name=USP9YP21;ID=intron:HG00140_ch_T0001812:0;Name=USP9YP21;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2408310	2408558	.	-	.	source_transcript=ENST00000420603.1;source_transcript_name=USP9YP21-201;source_gene=ENSG00000227635.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000227635.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000420603.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000420603.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP21;transcript_id=HG00140_ch_T0001812;gene_id=HG00140_ch_G0000681;Parent=HG00140_ch_T0001812;transcript_name=HG00140_ch_T0001812;gene_name=USP9YP21;ID=exon:HG00140_ch_T0001812:1;Name=USP9YP21;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	2415945	2426829	.	+	.	source_gene_common_name=XKRYP6;source_gene=ENSG00000237546.1;alternative_source_transcripts=ENST00000440468.1;gene_id=HG00140_ch_G0000682;gene_biotype=unprocessed_pseudogene;gene_name=XKRYP6;gene_sources=liftoff;ID=HG00140_ch_G0000682;Name=XKRYP6
HG00140_chrY_random0000005	CAT	transcript	2415945	2426829	1000	+	.	source_transcript=ENST00000440468.1;source_transcript_name=XKRYP6-201;source_gene=ENSG00000237546.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237546.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440468.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP6;alternative_source_transcripts=ENST00000440468.1;transcript_id=HG00140_ch_T0001813;gene_id=HG00140_ch_G0000682;Parent=HG00140_ch_G0000682;transcript_name=HG00140_ch_T0001813;gene_name=XKRYP6;ID=HG00140_ch_T0001813;Name=XKRYP6
HG00140_chrY_random0000005	CAT	exon	2415945	2416280	.	+	.	source_transcript=ENST00000440468.1;source_transcript_name=XKRYP6-201;source_gene=ENSG00000237546.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237546.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440468.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP6;alternative_source_transcripts=ENST00000440468.1;transcript_id=HG00140_ch_T0001813;gene_id=HG00140_ch_G0000682;Parent=HG00140_ch_T0001813;transcript_name=HG00140_ch_T0001813;gene_name=XKRYP6;ID=exon:HG00140_ch_T0001813:0;Name=XKRYP6;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2416281	2426049	.	+	.	source_transcript=ENST00000440468.1;source_transcript_name=XKRYP6-201;source_gene=ENSG00000237546.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237546.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440468.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP6;alternative_source_transcripts=ENST00000440468.1;transcript_id=HG00140_ch_T0001813;gene_id=HG00140_ch_G0000682;Parent=HG00140_ch_T0001813;transcript_name=HG00140_ch_T0001813;gene_name=XKRYP6;ID=intron:HG00140_ch_T0001813:0;Name=XKRYP6;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2426050	2426829	.	+	.	source_transcript=ENST00000440468.1;source_transcript_name=XKRYP6-201;source_gene=ENSG00000237546.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237546.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440468.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440468.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP6;alternative_source_transcripts=ENST00000440468.1;transcript_id=HG00140_ch_T0001813;gene_id=HG00140_ch_G0000682;Parent=HG00140_ch_T0001813;transcript_name=HG00140_ch_T0001813;gene_name=XKRYP6;ID=exon:HG00140_ch_T0001813:1;Name=XKRYP6;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	2463919	2464250	.	-	.	source_gene_common_name=ELOCP11;source_gene=ENSG00000227867.1;alternative_source_transcripts=ENST00000444494.1;gene_id=HG00140_ch_G0000683;gene_biotype=processed_pseudogene;gene_name=ELOCP11;gene_sources=liftoff;ID=HG00140_ch_G0000683;Name=ELOCP11
HG00140_chrY_random0000005	CAT	transcript	2463919	2464250	1000	-	.	source_transcript=ENST00000436690.1;source_transcript_name=ELOCP11-201;source_gene=ENSG00000227867.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227867.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436690.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP11;alternative_source_transcripts=ENST00000444494.1;transcript_id=HG00140_ch_T0001814;gene_id=HG00140_ch_G0000683;Parent=HG00140_ch_G0000683;transcript_name=HG00140_ch_T0001814;gene_name=ELOCP11;ID=HG00140_ch_T0001814;Name=ELOCP11
HG00140_chrY_random0000005	CAT	exon	2463919	2464250	.	-	.	source_transcript=ENST00000436690.1;source_transcript_name=ELOCP11-201;source_gene=ENSG00000227867.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000227867.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436690.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436690.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP11;alternative_source_transcripts=ENST00000444494.1;transcript_id=HG00140_ch_T0001814;gene_id=HG00140_ch_G0000683;Parent=HG00140_ch_T0001814;transcript_name=HG00140_ch_T0001814;gene_name=ELOCP11;ID=exon:HG00140_ch_T0001814:0;Name=ELOCP11;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	2467362	2468375	.	-	.	source_gene_common_name=CDY23P;source_gene=ENSG00000231716.1;alternative_source_transcripts=ENST00000431260.1;gene_id=HG00140_ch_G0000684;gene_biotype=unprocessed_pseudogene;gene_name=CDY23P;gene_sources=liftoff;ID=HG00140_ch_G0000684;Name=CDY23P
HG00140_chrY_random0000005	CAT	transcript	2467362	2468375	1000	-	.	source_transcript=ENST00000451661.1;source_transcript_name=CDY23P-201;source_gene=ENSG00000231716.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231716.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000451661.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451661.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY23P;alternative_source_transcripts=ENST00000431260.1;transcript_id=HG00140_ch_T0001815;gene_id=HG00140_ch_G0000684;Parent=HG00140_ch_G0000684;transcript_name=HG00140_ch_T0001815;gene_name=CDY23P;ID=HG00140_ch_T0001815;Name=CDY23P
HG00140_chrY_random0000005	CAT	exon	2467362	2468375	.	-	.	source_transcript=ENST00000451661.1;source_transcript_name=CDY23P-201;source_gene=ENSG00000231716.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000231716.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000451661.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451661.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY23P;alternative_source_transcripts=ENST00000431260.1;transcript_id=HG00140_ch_T0001815;gene_id=HG00140_ch_G0000684;Parent=HG00140_ch_T0001815;transcript_name=HG00140_ch_T0001815;gene_name=CDY23P;ID=exon:HG00140_ch_T0001815:0;Name=CDY23P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	2474932	2481534	.	+	.	source_gene_common_name=USP9YP26;source_gene=ENSG00000234744.1;gene_id=HG00140_ch_G0000685;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP26;gene_sources=liftoff;ID=HG00140_ch_G0000685;Name=USP9YP26
HG00140_chrY_random0000005	CAT	transcript	2474932	2481534	1000	+	.	source_transcript=ENST00000421008.1;source_transcript_name=USP9YP26-201;source_gene=ENSG00000234744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421008.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP26;transcript_id=HG00140_ch_T0001816;gene_id=HG00140_ch_G0000685;Parent=HG00140_ch_G0000685;transcript_name=HG00140_ch_T0001816;gene_name=USP9YP26;ID=HG00140_ch_T0001816;Name=USP9YP26
HG00140_chrY_random0000005	CAT	exon	2474932	2475154	.	+	.	source_transcript=ENST00000421008.1;source_transcript_name=USP9YP26-201;source_gene=ENSG00000234744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP26;transcript_id=HG00140_ch_T0001816;gene_id=HG00140_ch_G0000685;Parent=HG00140_ch_T0001816;transcript_name=HG00140_ch_T0001816;gene_name=USP9YP26;ID=exon:HG00140_ch_T0001816:0;Name=USP9YP26;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2475155	2476952	.	+	.	source_transcript=ENST00000421008.1;source_transcript_name=USP9YP26-201;source_gene=ENSG00000234744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP26;transcript_id=HG00140_ch_T0001816;gene_id=HG00140_ch_G0000685;Parent=HG00140_ch_T0001816;transcript_name=HG00140_ch_T0001816;gene_name=USP9YP26;ID=intron:HG00140_ch_T0001816:0;Name=USP9YP26;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2476953	2477071	.	+	.	source_transcript=ENST00000421008.1;source_transcript_name=USP9YP26-201;source_gene=ENSG00000234744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP26;transcript_id=HG00140_ch_T0001816;gene_id=HG00140_ch_G0000685;Parent=HG00140_ch_T0001816;transcript_name=HG00140_ch_T0001816;gene_name=USP9YP26;ID=exon:HG00140_ch_T0001816:1;Name=USP9YP26;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2477072	2478857	.	+	.	source_transcript=ENST00000421008.1;source_transcript_name=USP9YP26-201;source_gene=ENSG00000234744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP26;transcript_id=HG00140_ch_T0001816;gene_id=HG00140_ch_G0000685;Parent=HG00140_ch_T0001816;transcript_name=HG00140_ch_T0001816;gene_name=USP9YP26;ID=intron:HG00140_ch_T0001816:1;Name=USP9YP26;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2478858	2479047	.	+	.	source_transcript=ENST00000421008.1;source_transcript_name=USP9YP26-201;source_gene=ENSG00000234744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP26;transcript_id=HG00140_ch_T0001816;gene_id=HG00140_ch_G0000685;Parent=HG00140_ch_T0001816;transcript_name=HG00140_ch_T0001816;gene_name=USP9YP26;ID=exon:HG00140_ch_T0001816:2;Name=USP9YP26;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2479048	2481405	.	+	.	source_transcript=ENST00000421008.1;source_transcript_name=USP9YP26-201;source_gene=ENSG00000234744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP26;transcript_id=HG00140_ch_T0001816;gene_id=HG00140_ch_G0000685;Parent=HG00140_ch_T0001816;transcript_name=HG00140_ch_T0001816;gene_name=USP9YP26;ID=intron:HG00140_ch_T0001816:2;Name=USP9YP26;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2481406	2481534	.	+	.	source_transcript=ENST00000421008.1;source_transcript_name=USP9YP26-201;source_gene=ENSG00000234744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000234744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000421008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000421008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP26;transcript_id=HG00140_ch_T0001816;gene_id=HG00140_ch_G0000685;Parent=HG00140_ch_T0001816;transcript_name=HG00140_ch_T0001816;gene_name=USP9YP26;ID=exon:HG00140_ch_T0001816:3;Name=USP9YP26;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	2484113	2484915	.	+	.	source_gene_common_name=HSFY8P;source_gene=ENSG00000233156.1;gene_id=HG00140_ch_G0000686;gene_biotype=unprocessed_pseudogene;gene_name=HSFY8P;gene_sources=liftoff;ID=HG00140_ch_G0000686;Name=HSFY8P
HG00140_chrY_random0000005	CAT	transcript	2484113	2484915	1000	+	.	source_transcript=ENST00000437934.1;source_transcript_name=HSFY8P-201;source_gene=ENSG00000233156.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233156.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437934.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437934.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY8P;transcript_id=HG00140_ch_T0001817;gene_id=HG00140_ch_G0000686;Parent=HG00140_ch_G0000686;transcript_name=HG00140_ch_T0001817;gene_name=HSFY8P;ID=HG00140_ch_T0001817;Name=HSFY8P
HG00140_chrY_random0000005	CAT	exon	2484113	2484271	.	+	.	source_transcript=ENST00000437934.1;source_transcript_name=HSFY8P-201;source_gene=ENSG00000233156.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233156.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437934.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437934.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY8P;transcript_id=HG00140_ch_T0001817;gene_id=HG00140_ch_G0000686;Parent=HG00140_ch_T0001817;transcript_name=HG00140_ch_T0001817;gene_name=HSFY8P;ID=exon:HG00140_ch_T0001817:0;Name=HSFY8P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2484272	2484756	.	+	.	source_transcript=ENST00000437934.1;source_transcript_name=HSFY8P-201;source_gene=ENSG00000233156.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233156.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437934.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437934.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY8P;transcript_id=HG00140_ch_T0001817;gene_id=HG00140_ch_G0000686;Parent=HG00140_ch_T0001817;transcript_name=HG00140_ch_T0001817;gene_name=HSFY8P;ID=intron:HG00140_ch_T0001817:0;Name=HSFY8P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2484757	2484915	.	+	.	source_transcript=ENST00000437934.1;source_transcript_name=HSFY8P-201;source_gene=ENSG00000233156.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233156.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000437934.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000437934.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY8P;transcript_id=HG00140_ch_T0001817;gene_id=HG00140_ch_G0000686;Parent=HG00140_ch_T0001817;transcript_name=HG00140_ch_T0001817;gene_name=HSFY8P;ID=exon:HG00140_ch_T0001817:1;Name=HSFY8P;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	2501968	2505134	.	-	.	source_gene_common_name=ENSG00000295422;source_gene=ENSG00000295422.1;gene_id=HG00140_ch_G0000687;gene_biotype=lncRNA;gene_name=ENSG00000295422;gene_sources=liftoff;ID=HG00140_ch_G0000687;Name=ENSG00000295422
HG00140_chrY_random0000005	CAT	transcript	2501968	2505134	1000	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG00140_ch_T0001818;gene_id=HG00140_ch_G0000687;Parent=HG00140_ch_G0000687;transcript_name=HG00140_ch_T0001818;gene_name=ENSG00000295422;ID=HG00140_ch_T0001818;Name=ENSG00000295422
HG00140_chrY_random0000005	CAT	exon	2501968	2503310	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG00140_ch_T0001818;gene_id=HG00140_ch_G0000687;Parent=HG00140_ch_T0001818;transcript_name=HG00140_ch_T0001818;gene_name=ENSG00000295422;ID=exon:HG00140_ch_T0001818:0;Name=ENSG00000295422;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2503311	2504845	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG00140_ch_T0001818;gene_id=HG00140_ch_G0000687;Parent=HG00140_ch_T0001818;transcript_name=HG00140_ch_T0001818;gene_name=ENSG00000295422;ID=intron:HG00140_ch_T0001818:0;Name=ENSG00000295422;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2504846	2504906	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG00140_ch_T0001818;gene_id=HG00140_ch_G0000687;Parent=HG00140_ch_T0001818;transcript_name=HG00140_ch_T0001818;gene_name=ENSG00000295422;ID=exon:HG00140_ch_T0001818:1;Name=ENSG00000295422;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2504907	2505023	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG00140_ch_T0001818;gene_id=HG00140_ch_G0000687;Parent=HG00140_ch_T0001818;transcript_name=HG00140_ch_T0001818;gene_name=ENSG00000295422;ID=intron:HG00140_ch_T0001818:1;Name=ENSG00000295422;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2505024	2505134	.	-	.	source_transcript=ENST00000729927.1;source_transcript_name=ENST00000729927;source_gene=ENSG00000295422.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000295422.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000729927.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000729927.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000295422;transcript_id=HG00140_ch_T0001818;gene_id=HG00140_ch_G0000687;Parent=HG00140_ch_T0001818;transcript_name=HG00140_ch_T0001818;gene_name=ENSG00000295422;ID=exon:HG00140_ch_T0001818:2;Name=ENSG00000295422;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	2520360	2592438	.	-	.	source_gene_common_name=ENSG00000299596;source_gene=ENSG00000299596.1;gene_id=HG00140_ch_G0000688;gene_biotype=lncRNA;gene_name=ENSG00000299596;gene_sources=liftoff;ID=HG00140_ch_G0000688;Name=ENSG00000299596
HG00140_chrY_random0000005	CAT	transcript	2520360	2556058	1000	-	.	source_transcript=ENST00000764955.1;source_transcript_name=ENST00000764955;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764955.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001819;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_G0000688;transcript_name=HG00140_ch_T0001819;gene_name=ENSG00000299596;ID=HG00140_ch_T0001819;Name=ENSG00000299596
HG00140_chrY_random0000005	CAT	exon	2520360	2521097	.	-	.	source_transcript=ENST00000764955.1;source_transcript_name=ENST00000764955;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764955.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001819;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001819;transcript_name=HG00140_ch_T0001819;gene_name=ENSG00000299596;ID=exon:HG00140_ch_T0001819:0;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2521098	2524014	.	-	.	source_transcript=ENST00000764955.1;source_transcript_name=ENST00000764955;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764955.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001819;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001819;transcript_name=HG00140_ch_T0001819;gene_name=ENSG00000299596;ID=intron:HG00140_ch_T0001819:0;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2524015	2524075	.	-	.	source_transcript=ENST00000764955.1;source_transcript_name=ENST00000764955;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764955.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001819;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001819;transcript_name=HG00140_ch_T0001819;gene_name=ENSG00000299596;ID=exon:HG00140_ch_T0001819:1;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2524076	2527327	.	-	.	source_transcript=ENST00000764955.1;source_transcript_name=ENST00000764955;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764955.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001819;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001819;transcript_name=HG00140_ch_T0001819;gene_name=ENSG00000299596;ID=intron:HG00140_ch_T0001819:1;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2527328	2527429	.	-	.	source_transcript=ENST00000764955.1;source_transcript_name=ENST00000764955;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764955.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001819;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001819;transcript_name=HG00140_ch_T0001819;gene_name=ENSG00000299596;ID=exon:HG00140_ch_T0001819:2;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2527430	2536507	.	-	.	source_transcript=ENST00000764955.1;source_transcript_name=ENST00000764955;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764955.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001819;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001819;transcript_name=HG00140_ch_T0001819;gene_name=ENSG00000299596;ID=intron:HG00140_ch_T0001819:2;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2536508	2536608	.	-	.	source_transcript=ENST00000764955.1;source_transcript_name=ENST00000764955;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764955.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001819;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001819;transcript_name=HG00140_ch_T0001819;gene_name=ENSG00000299596;ID=exon:HG00140_ch_T0001819:3;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2536609	2555947	.	-	.	source_transcript=ENST00000764955.1;source_transcript_name=ENST00000764955;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764955.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001819;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001819;transcript_name=HG00140_ch_T0001819;gene_name=ENSG00000299596;ID=intron:HG00140_ch_T0001819:3;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2555948	2556058	.	-	.	source_transcript=ENST00000764955.1;source_transcript_name=ENST00000764955;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764955.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764955.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001819;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001819;transcript_name=HG00140_ch_T0001819;gene_name=ENSG00000299596;ID=exon:HG00140_ch_T0001819:4;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	2520678	2556058	1000	-	.	source_transcript=ENST00000764956.1;source_transcript_name=ENST00000764956;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764956.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001820;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_G0000688;transcript_name=HG00140_ch_T0001820;gene_name=ENSG00000299596;ID=HG00140_ch_T0001820;Name=ENSG00000299596
HG00140_chrY_random0000005	CAT	exon	2520678	2521097	.	-	.	source_transcript=ENST00000764956.1;source_transcript_name=ENST00000764956;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001820;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001820;transcript_name=HG00140_ch_T0001820;gene_name=ENSG00000299596;ID=exon:HG00140_ch_T0001820:0;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2521098	2524014	.	-	.	source_transcript=ENST00000764956.1;source_transcript_name=ENST00000764956;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001820;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001820;transcript_name=HG00140_ch_T0001820;gene_name=ENSG00000299596;ID=intron:HG00140_ch_T0001820:0;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2524015	2524078	.	-	.	source_transcript=ENST00000764956.1;source_transcript_name=ENST00000764956;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001820;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001820;transcript_name=HG00140_ch_T0001820;gene_name=ENSG00000299596;ID=exon:HG00140_ch_T0001820:1;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2524079	2527327	.	-	.	source_transcript=ENST00000764956.1;source_transcript_name=ENST00000764956;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001820;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001820;transcript_name=HG00140_ch_T0001820;gene_name=ENSG00000299596;ID=intron:HG00140_ch_T0001820:1;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2527328	2527429	.	-	.	source_transcript=ENST00000764956.1;source_transcript_name=ENST00000764956;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001820;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001820;transcript_name=HG00140_ch_T0001820;gene_name=ENSG00000299596;ID=exon:HG00140_ch_T0001820:2;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2527430	2536507	.	-	.	source_transcript=ENST00000764956.1;source_transcript_name=ENST00000764956;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001820;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001820;transcript_name=HG00140_ch_T0001820;gene_name=ENSG00000299596;ID=intron:HG00140_ch_T0001820:2;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2536508	2536608	.	-	.	source_transcript=ENST00000764956.1;source_transcript_name=ENST00000764956;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001820;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001820;transcript_name=HG00140_ch_T0001820;gene_name=ENSG00000299596;ID=exon:HG00140_ch_T0001820:3;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2536609	2555947	.	-	.	source_transcript=ENST00000764956.1;source_transcript_name=ENST00000764956;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001820;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001820;transcript_name=HG00140_ch_T0001820;gene_name=ENSG00000299596;ID=intron:HG00140_ch_T0001820:3;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2555948	2556058	.	-	.	source_transcript=ENST00000764956.1;source_transcript_name=ENST00000764956;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764956.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764956.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001820;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001820;transcript_name=HG00140_ch_T0001820;gene_name=ENSG00000299596;ID=exon:HG00140_ch_T0001820:4;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	2527214	2556058	1000	-	.	source_transcript=ENST00000764957.1;source_transcript_name=ENST00000764957;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764957.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001821;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_G0000688;transcript_name=HG00140_ch_T0001821;gene_name=ENSG00000299596;ID=HG00140_ch_T0001821;Name=ENSG00000299596
HG00140_chrY_random0000005	CAT	exon	2527214	2528530	.	-	.	source_transcript=ENST00000764957.1;source_transcript_name=ENST00000764957;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764957.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001821;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001821;transcript_name=HG00140_ch_T0001821;gene_name=ENSG00000299596;ID=exon:HG00140_ch_T0001821:0;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2528531	2536507	.	-	.	source_transcript=ENST00000764957.1;source_transcript_name=ENST00000764957;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764957.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001821;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001821;transcript_name=HG00140_ch_T0001821;gene_name=ENSG00000299596;ID=intron:HG00140_ch_T0001821:0;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2536508	2536608	.	-	.	source_transcript=ENST00000764957.1;source_transcript_name=ENST00000764957;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764957.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001821;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001821;transcript_name=HG00140_ch_T0001821;gene_name=ENSG00000299596;ID=exon:HG00140_ch_T0001821:1;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2536609	2555947	.	-	.	source_transcript=ENST00000764957.1;source_transcript_name=ENST00000764957;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764957.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001821;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001821;transcript_name=HG00140_ch_T0001821;gene_name=ENSG00000299596;ID=intron:HG00140_ch_T0001821:1;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2555948	2556058	.	-	.	source_transcript=ENST00000764957.1;source_transcript_name=ENST00000764957;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764957.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764957.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001821;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001821;transcript_name=HG00140_ch_T0001821;gene_name=ENSG00000299596;ID=exon:HG00140_ch_T0001821:2;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	2527889	2592438	1000	-	.	source_transcript=ENST00000764959.1;source_transcript_name=ENST00000764959;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764959.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001822;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_G0000688;transcript_name=HG00140_ch_T0001822;gene_name=ENSG00000299596;ID=HG00140_ch_T0001822;Name=ENSG00000299596
HG00140_chrY_random0000005	CAT	exon	2527889	2528530	.	-	.	source_transcript=ENST00000764959.1;source_transcript_name=ENST00000764959;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764959.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001822;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001822;transcript_name=HG00140_ch_T0001822;gene_name=ENSG00000299596;ID=exon:HG00140_ch_T0001822:0;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2528531	2536507	.	-	.	source_transcript=ENST00000764959.1;source_transcript_name=ENST00000764959;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764959.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001822;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001822;transcript_name=HG00140_ch_T0001822;gene_name=ENSG00000299596;ID=intron:HG00140_ch_T0001822:0;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2536508	2536608	.	-	.	source_transcript=ENST00000764959.1;source_transcript_name=ENST00000764959;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764959.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001822;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001822;transcript_name=HG00140_ch_T0001822;gene_name=ENSG00000299596;ID=exon:HG00140_ch_T0001822:1;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2536609	2555947	.	-	.	source_transcript=ENST00000764959.1;source_transcript_name=ENST00000764959;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764959.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001822;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001822;transcript_name=HG00140_ch_T0001822;gene_name=ENSG00000299596;ID=intron:HG00140_ch_T0001822:1;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2555948	2556058	.	-	.	source_transcript=ENST00000764959.1;source_transcript_name=ENST00000764959;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764959.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001822;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001822;transcript_name=HG00140_ch_T0001822;gene_name=ENSG00000299596;ID=exon:HG00140_ch_T0001822:2;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2556059	2591370	.	-	.	source_transcript=ENST00000764959.1;source_transcript_name=ENST00000764959;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764959.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001822;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001822;transcript_name=HG00140_ch_T0001822;gene_name=ENSG00000299596;ID=intron:HG00140_ch_T0001822:2;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2591371	2591461	.	-	.	source_transcript=ENST00000764959.1;source_transcript_name=ENST00000764959;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764959.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001822;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001822;transcript_name=HG00140_ch_T0001822;gene_name=ENSG00000299596;ID=exon:HG00140_ch_T0001822:3;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2591462	2592321	.	-	.	source_transcript=ENST00000764959.1;source_transcript_name=ENST00000764959;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764959.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001822;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001822;transcript_name=HG00140_ch_T0001822;gene_name=ENSG00000299596;ID=intron:HG00140_ch_T0001822:3;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2592322	2592438	.	-	.	source_transcript=ENST00000764959.1;source_transcript_name=ENST00000764959;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764959.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764959.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001822;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001822;transcript_name=HG00140_ch_T0001822;gene_name=ENSG00000299596;ID=exon:HG00140_ch_T0001822:4;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	2527889	2556058	1000	-	.	source_transcript=ENST00000764958.1;source_transcript_name=ENST00000764958;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764958.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001823;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_G0000688;transcript_name=HG00140_ch_T0001823;gene_name=ENSG00000299596;ID=HG00140_ch_T0001823;Name=ENSG00000299596
HG00140_chrY_random0000005	CAT	exon	2527889	2528149	.	-	.	source_transcript=ENST00000764958.1;source_transcript_name=ENST00000764958;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764958.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001823;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001823;transcript_name=HG00140_ch_T0001823;gene_name=ENSG00000299596;ID=exon:HG00140_ch_T0001823:0;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2528150	2536507	.	-	.	source_transcript=ENST00000764958.1;source_transcript_name=ENST00000764958;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764958.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001823;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001823;transcript_name=HG00140_ch_T0001823;gene_name=ENSG00000299596;ID=intron:HG00140_ch_T0001823:0;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2536508	2536608	.	-	.	source_transcript=ENST00000764958.1;source_transcript_name=ENST00000764958;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764958.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001823;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001823;transcript_name=HG00140_ch_T0001823;gene_name=ENSG00000299596;ID=exon:HG00140_ch_T0001823:1;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2536609	2555947	.	-	.	source_transcript=ENST00000764958.1;source_transcript_name=ENST00000764958;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764958.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001823;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001823;transcript_name=HG00140_ch_T0001823;gene_name=ENSG00000299596;ID=intron:HG00140_ch_T0001823:1;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2555948	2556058	.	-	.	source_transcript=ENST00000764958.1;source_transcript_name=ENST00000764958;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764958.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764958.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001823;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001823;transcript_name=HG00140_ch_T0001823;gene_name=ENSG00000299596;ID=exon:HG00140_ch_T0001823:2;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	2528193	2556058	1000	-	.	source_transcript=ENST00000764960.1;source_transcript_name=ENST00000764960;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764960.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001824;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_G0000688;transcript_name=HG00140_ch_T0001824;gene_name=ENSG00000299596;ID=HG00140_ch_T0001824;Name=ENSG00000299596
HG00140_chrY_random0000005	CAT	exon	2528193	2528530	.	-	.	source_transcript=ENST00000764960.1;source_transcript_name=ENST00000764960;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764960.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001824;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001824;transcript_name=HG00140_ch_T0001824;gene_name=ENSG00000299596;ID=exon:HG00140_ch_T0001824:0;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2528531	2536507	.	-	.	source_transcript=ENST00000764960.1;source_transcript_name=ENST00000764960;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764960.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001824;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001824;transcript_name=HG00140_ch_T0001824;gene_name=ENSG00000299596;ID=intron:HG00140_ch_T0001824:0;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2536508	2536608	.	-	.	source_transcript=ENST00000764960.1;source_transcript_name=ENST00000764960;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764960.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001824;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001824;transcript_name=HG00140_ch_T0001824;gene_name=ENSG00000299596;ID=exon:HG00140_ch_T0001824:1;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2536609	2555947	.	-	.	source_transcript=ENST00000764960.1;source_transcript_name=ENST00000764960;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764960.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001824;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001824;transcript_name=HG00140_ch_T0001824;gene_name=ENSG00000299596;ID=intron:HG00140_ch_T0001824:1;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2555948	2556058	.	-	.	source_transcript=ENST00000764960.1;source_transcript_name=ENST00000764960;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764960.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001824;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001824;transcript_name=HG00140_ch_T0001824;gene_name=ENSG00000299596;ID=exon:HG00140_ch_T0001824:2;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	2536550	2556058	1000	-	.	source_transcript=ENST00000764954.1;source_transcript_name=ENST00000764954;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764954.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764954.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001826;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_G0000688;transcript_name=HG00140_ch_T0001826;gene_name=ENSG00000299596;ID=HG00140_ch_T0001826;Name=ENSG00000299596
HG00140_chrY_random0000005	CAT	exon	2536550	2536608	.	-	.	source_transcript=ENST00000764954.1;source_transcript_name=ENST00000764954;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764954.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764954.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001826;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001826;transcript_name=HG00140_ch_T0001826;gene_name=ENSG00000299596;ID=exon:HG00140_ch_T0001826:0;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2536609	2555947	.	-	.	source_transcript=ENST00000764954.1;source_transcript_name=ENST00000764954;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764954.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764954.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001826;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001826;transcript_name=HG00140_ch_T0001826;gene_name=ENSG00000299596;ID=intron:HG00140_ch_T0001826:0;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2555948	2556058	.	-	.	source_transcript=ENST00000764954.1;source_transcript_name=ENST00000764954;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764954.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764954.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001826;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001826;transcript_name=HG00140_ch_T0001826;gene_name=ENSG00000299596;ID=exon:HG00140_ch_T0001826:1;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	2555517	2556058	1000	-	.	source_transcript=ENST00000764961.1;source_transcript_name=ENST00000764961;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764961.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001827;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_G0000688;transcript_name=HG00140_ch_T0001827;gene_name=ENSG00000299596;ID=HG00140_ch_T0001827;Name=ENSG00000299596
HG00140_chrY_random0000005	CAT	exon	2555517	2555851	.	-	.	source_transcript=ENST00000764961.1;source_transcript_name=ENST00000764961;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764961.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001827;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001827;transcript_name=HG00140_ch_T0001827;gene_name=ENSG00000299596;ID=exon:HG00140_ch_T0001827:0;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2555852	2555947	.	-	.	source_transcript=ENST00000764961.1;source_transcript_name=ENST00000764961;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764961.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001827;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001827;transcript_name=HG00140_ch_T0001827;gene_name=ENSG00000299596;ID=intron:HG00140_ch_T0001827:0;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2555948	2556058	.	-	.	source_transcript=ENST00000764961.1;source_transcript_name=ENST00000764961;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764961.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764961.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001827;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001827;transcript_name=HG00140_ch_T0001827;gene_name=ENSG00000299596;ID=exon:HG00140_ch_T0001827:1;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	2555541	2592438	1000	-	.	source_transcript=ENST00000764962.1;source_transcript_name=ENST00000764962;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764962.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001828;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_G0000688;transcript_name=HG00140_ch_T0001828;gene_name=ENSG00000299596;ID=HG00140_ch_T0001828;Name=ENSG00000299596
HG00140_chrY_random0000005	CAT	exon	2555541	2555851	.	-	.	source_transcript=ENST00000764962.1;source_transcript_name=ENST00000764962;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764962.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001828;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001828;transcript_name=HG00140_ch_T0001828;gene_name=ENSG00000299596;ID=exon:HG00140_ch_T0001828:0;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2555852	2555947	.	-	.	source_transcript=ENST00000764962.1;source_transcript_name=ENST00000764962;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764962.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001828;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001828;transcript_name=HG00140_ch_T0001828;gene_name=ENSG00000299596;ID=intron:HG00140_ch_T0001828:0;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2555948	2556058	.	-	.	source_transcript=ENST00000764962.1;source_transcript_name=ENST00000764962;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764962.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001828;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001828;transcript_name=HG00140_ch_T0001828;gene_name=ENSG00000299596;ID=exon:HG00140_ch_T0001828:1;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2556059	2591370	.	-	.	source_transcript=ENST00000764962.1;source_transcript_name=ENST00000764962;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764962.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001828;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001828;transcript_name=HG00140_ch_T0001828;gene_name=ENSG00000299596;ID=intron:HG00140_ch_T0001828:1;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2591371	2591461	.	-	.	source_transcript=ENST00000764962.1;source_transcript_name=ENST00000764962;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764962.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001828;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001828;transcript_name=HG00140_ch_T0001828;gene_name=ENSG00000299596;ID=exon:HG00140_ch_T0001828:2;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2591462	2592321	.	-	.	source_transcript=ENST00000764962.1;source_transcript_name=ENST00000764962;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764962.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001828;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001828;transcript_name=HG00140_ch_T0001828;gene_name=ENSG00000299596;ID=intron:HG00140_ch_T0001828:2;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2592322	2592438	.	-	.	source_transcript=ENST00000764962.1;source_transcript_name=ENST00000764962;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764962.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764962.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001828;gene_id=HG00140_ch_G0000688;Parent=HG00140_ch_T0001828;transcript_name=HG00140_ch_T0001828;gene_name=ENSG00000299596;ID=exon:HG00140_ch_T0001828:3;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	2528458	2561167	.	-	.	source_gene_common_name=OFD1P15Y;source_gene=ENSG00000234888.1;gene_id=HG00140_ch_G0000689;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=OFD1P15Y;gene_sources=liftoff;ID=HG00140_ch_G0000689;Name=OFD1P15Y
HG00140_chrY_random0000005	CAT	transcript	2528458	2561167	1000	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=HG00140_ch_T0001825;gene_id=HG00140_ch_G0000689;Parent=HG00140_ch_G0000689;transcript_name=HG00140_ch_T0001825;gene_name=OFD1P15Y;ID=HG00140_ch_T0001825;Name=OFD1P15Y
HG00140_chrY_random0000005	CAT	exon	2528458	2528528	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=HG00140_ch_T0001825;gene_id=HG00140_ch_G0000689;Parent=HG00140_ch_T0001825;transcript_name=HG00140_ch_T0001825;gene_name=OFD1P15Y;ID=exon:HG00140_ch_T0001825:0;Name=OFD1P15Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2528529	2529709	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=HG00140_ch_T0001825;gene_id=HG00140_ch_G0000689;Parent=HG00140_ch_T0001825;transcript_name=HG00140_ch_T0001825;gene_name=OFD1P15Y;ID=intron:HG00140_ch_T0001825:0;Name=OFD1P15Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2529710	2529873	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=HG00140_ch_T0001825;gene_id=HG00140_ch_G0000689;Parent=HG00140_ch_T0001825;transcript_name=HG00140_ch_T0001825;gene_name=OFD1P15Y;ID=exon:HG00140_ch_T0001825:1;Name=OFD1P15Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2529874	2536511	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=HG00140_ch_T0001825;gene_id=HG00140_ch_G0000689;Parent=HG00140_ch_T0001825;transcript_name=HG00140_ch_T0001825;gene_name=OFD1P15Y;ID=intron:HG00140_ch_T0001825:1;Name=OFD1P15Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2536512	2536608	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=HG00140_ch_T0001825;gene_id=HG00140_ch_G0000689;Parent=HG00140_ch_T0001825;transcript_name=HG00140_ch_T0001825;gene_name=OFD1P15Y;ID=exon:HG00140_ch_T0001825:2;Name=OFD1P15Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2536609	2555961	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=HG00140_ch_T0001825;gene_id=HG00140_ch_G0000689;Parent=HG00140_ch_T0001825;transcript_name=HG00140_ch_T0001825;gene_name=OFD1P15Y;ID=intron:HG00140_ch_T0001825:2;Name=OFD1P15Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2555962	2556058	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=HG00140_ch_T0001825;gene_id=HG00140_ch_G0000689;Parent=HG00140_ch_T0001825;transcript_name=HG00140_ch_T0001825;gene_name=OFD1P15Y;ID=exon:HG00140_ch_T0001825:3;Name=OFD1P15Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2556059	2556427	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=HG00140_ch_T0001825;gene_id=HG00140_ch_G0000689;Parent=HG00140_ch_T0001825;transcript_name=HG00140_ch_T0001825;gene_name=OFD1P15Y;ID=intron:HG00140_ch_T0001825:3;Name=OFD1P15Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2556428	2557047	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=HG00140_ch_T0001825;gene_id=HG00140_ch_G0000689;Parent=HG00140_ch_T0001825;transcript_name=HG00140_ch_T0001825;gene_name=OFD1P15Y;ID=exon:HG00140_ch_T0001825:4;Name=OFD1P15Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2557048	2558764	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=HG00140_ch_T0001825;gene_id=HG00140_ch_G0000689;Parent=HG00140_ch_T0001825;transcript_name=HG00140_ch_T0001825;gene_name=OFD1P15Y;ID=intron:HG00140_ch_T0001825:4;Name=OFD1P15Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2558765	2558877	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=HG00140_ch_T0001825;gene_id=HG00140_ch_G0000689;Parent=HG00140_ch_T0001825;transcript_name=HG00140_ch_T0001825;gene_name=OFD1P15Y;ID=exon:HG00140_ch_T0001825:5;Name=OFD1P15Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2558878	2559413	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=HG00140_ch_T0001825;gene_id=HG00140_ch_G0000689;Parent=HG00140_ch_T0001825;transcript_name=HG00140_ch_T0001825;gene_name=OFD1P15Y;ID=intron:HG00140_ch_T0001825:5;Name=OFD1P15Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2559414	2559538	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=HG00140_ch_T0001825;gene_id=HG00140_ch_G0000689;Parent=HG00140_ch_T0001825;transcript_name=HG00140_ch_T0001825;gene_name=OFD1P15Y;ID=exon:HG00140_ch_T0001825:6;Name=OFD1P15Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2559539	2561062	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=HG00140_ch_T0001825;gene_id=HG00140_ch_G0000689;Parent=HG00140_ch_T0001825;transcript_name=HG00140_ch_T0001825;gene_name=OFD1P15Y;ID=intron:HG00140_ch_T0001825:6;Name=OFD1P15Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2561063	2561167	.	-	.	source_transcript=ENST00000411536.1;source_transcript_name=OFD1P15Y-201;source_gene=ENSG00000234888.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000234888.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411536.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411536.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P15Y;transcript_id=HG00140_ch_T0001825;gene_id=HG00140_ch_G0000689;Parent=HG00140_ch_T0001825;transcript_name=HG00140_ch_T0001825;gene_name=OFD1P15Y;ID=exon:HG00140_ch_T0001825:7;Name=OFD1P15Y;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	2582670	2588124	.	+	.	source_gene_common_name=ENSG00000299625;source_gene=ENSG00000299625.1;gene_id=HG00140_ch_G0000690;gene_biotype=lncRNA;gene_name=ENSG00000299625;gene_sources=liftoff;ID=HG00140_ch_G0000690;Name=ENSG00000299625
HG00140_chrY_random0000005	CAT	transcript	2582670	2588118	1000	+	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG00140_ch_T0001829;gene_id=HG00140_ch_G0000690;Parent=HG00140_ch_G0000690;transcript_name=HG00140_ch_T0001829;gene_name=ENSG00000299625;ID=HG00140_ch_T0001829;Name=ENSG00000299625
HG00140_chrY_random0000005	CAT	exon	2582670	2583009	.	+	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG00140_ch_T0001829;gene_id=HG00140_ch_G0000690;Parent=HG00140_ch_T0001829;transcript_name=HG00140_ch_T0001829;gene_name=ENSG00000299625;ID=exon:HG00140_ch_T0001829:0;Name=ENSG00000299625;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2583010	2586927	.	+	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG00140_ch_T0001829;gene_id=HG00140_ch_G0000690;Parent=HG00140_ch_T0001829;transcript_name=HG00140_ch_T0001829;gene_name=ENSG00000299625;ID=intron:HG00140_ch_T0001829:0;Name=ENSG00000299625;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2586928	2587054	.	+	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG00140_ch_T0001829;gene_id=HG00140_ch_G0000690;Parent=HG00140_ch_T0001829;transcript_name=HG00140_ch_T0001829;gene_name=ENSG00000299625;ID=exon:HG00140_ch_T0001829:1;Name=ENSG00000299625;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2587055	2587418	.	+	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG00140_ch_T0001829;gene_id=HG00140_ch_G0000690;Parent=HG00140_ch_T0001829;transcript_name=HG00140_ch_T0001829;gene_name=ENSG00000299625;ID=intron:HG00140_ch_T0001829:1;Name=ENSG00000299625;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2587419	2588118	.	+	.	source_transcript=ENST00000765190.1;source_transcript_name=ENST00000765190;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765190.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765190.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;transcript_id=HG00140_ch_T0001829;gene_id=HG00140_ch_G0000690;Parent=HG00140_ch_T0001829;transcript_name=HG00140_ch_T0001829;gene_name=ENSG00000299625;ID=exon:HG00140_ch_T0001829:2;Name=ENSG00000299625;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	2582671	2588124	1000	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000812264.1;transcript_id=HG00140_ch_T0001830;gene_id=HG00140_ch_G0000690;Parent=HG00140_ch_G0000690;transcript_name=HG00140_ch_T0001830;gene_name=ENSG00000299625;ID=HG00140_ch_T0001830;Name=ENSG00000299625
HG00140_chrY_random0000005	CAT	exon	2582671	2583009	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000812264.1;transcript_id=HG00140_ch_T0001830;gene_id=HG00140_ch_G0000690;Parent=HG00140_ch_T0001830;transcript_name=HG00140_ch_T0001830;gene_name=ENSG00000299625;ID=exon:HG00140_ch_T0001830:0;Name=ENSG00000299625;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2583010	2584925	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000812264.1;transcript_id=HG00140_ch_T0001830;gene_id=HG00140_ch_G0000690;Parent=HG00140_ch_T0001830;transcript_name=HG00140_ch_T0001830;gene_name=ENSG00000299625;ID=intron:HG00140_ch_T0001830:0;Name=ENSG00000299625;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2584926	2585059	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000812264.1;transcript_id=HG00140_ch_T0001830;gene_id=HG00140_ch_G0000690;Parent=HG00140_ch_T0001830;transcript_name=HG00140_ch_T0001830;gene_name=ENSG00000299625;ID=exon:HG00140_ch_T0001830:1;Name=ENSG00000299625;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2585060	2586927	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000812264.1;transcript_id=HG00140_ch_T0001830;gene_id=HG00140_ch_G0000690;Parent=HG00140_ch_T0001830;transcript_name=HG00140_ch_T0001830;gene_name=ENSG00000299625;ID=intron:HG00140_ch_T0001830:1;Name=ENSG00000299625;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2586928	2587054	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000812264.1;transcript_id=HG00140_ch_T0001830;gene_id=HG00140_ch_G0000690;Parent=HG00140_ch_T0001830;transcript_name=HG00140_ch_T0001830;gene_name=ENSG00000299625;ID=exon:HG00140_ch_T0001830:2;Name=ENSG00000299625;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2587055	2587418	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000812264.1;transcript_id=HG00140_ch_T0001830;gene_id=HG00140_ch_G0000690;Parent=HG00140_ch_T0001830;transcript_name=HG00140_ch_T0001830;gene_name=ENSG00000299625;ID=intron:HG00140_ch_T0001830:2;Name=ENSG00000299625;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2587419	2588124	.	+	.	source_transcript=ENST00000765189.1;source_transcript_name=ENST00000765189;source_gene=ENSG00000299625.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299625.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765189.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299625;alternative_source_transcripts=ENST00000812264.1;transcript_id=HG00140_ch_T0001830;gene_id=HG00140_ch_G0000690;Parent=HG00140_ch_T0001830;transcript_name=HG00140_ch_T0001830;gene_name=ENSG00000299625;ID=exon:HG00140_ch_T0001830:3;Name=ENSG00000299625;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	2594325	2608456	.	+	.	source_gene_common_name=ENSG00000293280;source_gene=ENSG00000293280.2;gene_id=HG00140_ch_G0000691;gene_biotype=lncRNA;gene_name=ENSG00000293280;gene_sources=liftoff;ID=HG00140_ch_G0000691;Name=ENSG00000293280
HG00140_chrY_random0000005	CAT	transcript	2594325	2602818	1000	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00140_ch_T0001831;gene_id=HG00140_ch_G0000691;Parent=HG00140_ch_G0000691;transcript_name=HG00140_ch_T0001831;gene_name=ENSG00000293280;ID=HG00140_ch_T0001831;Name=ENSG00000293280
HG00140_chrY_random0000005	CAT	exon	2594325	2594488	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00140_ch_T0001831;gene_id=HG00140_ch_G0000691;Parent=HG00140_ch_T0001831;transcript_name=HG00140_ch_T0001831;gene_name=ENSG00000293280;ID=exon:HG00140_ch_T0001831:0;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2594489	2595242	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00140_ch_T0001831;gene_id=HG00140_ch_G0000691;Parent=HG00140_ch_T0001831;transcript_name=HG00140_ch_T0001831;gene_name=ENSG00000293280;ID=intron:HG00140_ch_T0001831:0;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2595243	2595322	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00140_ch_T0001831;gene_id=HG00140_ch_G0000691;Parent=HG00140_ch_T0001831;transcript_name=HG00140_ch_T0001831;gene_name=ENSG00000293280;ID=exon:HG00140_ch_T0001831:1;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2595323	2596336	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00140_ch_T0001831;gene_id=HG00140_ch_G0000691;Parent=HG00140_ch_T0001831;transcript_name=HG00140_ch_T0001831;gene_name=ENSG00000293280;ID=intron:HG00140_ch_T0001831:1;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2596337	2596449	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00140_ch_T0001831;gene_id=HG00140_ch_G0000691;Parent=HG00140_ch_T0001831;transcript_name=HG00140_ch_T0001831;gene_name=ENSG00000293280;ID=exon:HG00140_ch_T0001831:2;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2596450	2596902	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00140_ch_T0001831;gene_id=HG00140_ch_G0000691;Parent=HG00140_ch_T0001831;transcript_name=HG00140_ch_T0001831;gene_name=ENSG00000293280;ID=intron:HG00140_ch_T0001831:2;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2596903	2597006	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00140_ch_T0001831;gene_id=HG00140_ch_G0000691;Parent=HG00140_ch_T0001831;transcript_name=HG00140_ch_T0001831;gene_name=ENSG00000293280;ID=exon:HG00140_ch_T0001831:3;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2597007	2599714	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00140_ch_T0001831;gene_id=HG00140_ch_G0000691;Parent=HG00140_ch_T0001831;transcript_name=HG00140_ch_T0001831;gene_name=ENSG00000293280;ID=intron:HG00140_ch_T0001831:3;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2599715	2599892	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00140_ch_T0001831;gene_id=HG00140_ch_G0000691;Parent=HG00140_ch_T0001831;transcript_name=HG00140_ch_T0001831;gene_name=ENSG00000293280;ID=exon:HG00140_ch_T0001831:4;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2599893	2601827	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00140_ch_T0001831;gene_id=HG00140_ch_G0000691;Parent=HG00140_ch_T0001831;transcript_name=HG00140_ch_T0001831;gene_name=ENSG00000293280;ID=intron:HG00140_ch_T0001831:4;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2601828	2601980	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00140_ch_T0001831;gene_id=HG00140_ch_G0000691;Parent=HG00140_ch_T0001831;transcript_name=HG00140_ch_T0001831;gene_name=ENSG00000293280;ID=exon:HG00140_ch_T0001831:5;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2601981	2602558	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00140_ch_T0001831;gene_id=HG00140_ch_G0000691;Parent=HG00140_ch_T0001831;transcript_name=HG00140_ch_T0001831;gene_name=ENSG00000293280;ID=intron:HG00140_ch_T0001831:5;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2602559	2602818	.	+	.	source_transcript=ENST00000765087.1;source_transcript_name=ENST00000765087;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000765087.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000765087.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00140_ch_T0001831;gene_id=HG00140_ch_G0000691;Parent=HG00140_ch_T0001831;transcript_name=HG00140_ch_T0001831;gene_name=ENSG00000293280;ID=exon:HG00140_ch_T0001831:6;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	2594335	2608456	1000	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00140_ch_T0001832;gene_id=HG00140_ch_G0000691;Parent=HG00140_ch_G0000691;transcript_name=HG00140_ch_T0001832;gene_name=ENSG00000293280;ID=HG00140_ch_T0001832;Name=ENSG00000293280
HG00140_chrY_random0000005	CAT	exon	2594335	2594488	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00140_ch_T0001832;gene_id=HG00140_ch_G0000691;Parent=HG00140_ch_T0001832;transcript_name=HG00140_ch_T0001832;gene_name=ENSG00000293280;ID=exon:HG00140_ch_T0001832:0;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2594489	2595242	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00140_ch_T0001832;gene_id=HG00140_ch_G0000691;Parent=HG00140_ch_T0001832;transcript_name=HG00140_ch_T0001832;gene_name=ENSG00000293280;ID=intron:HG00140_ch_T0001832:0;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2595243	2595322	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00140_ch_T0001832;gene_id=HG00140_ch_G0000691;Parent=HG00140_ch_T0001832;transcript_name=HG00140_ch_T0001832;gene_name=ENSG00000293280;ID=exon:HG00140_ch_T0001832:1;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2595323	2596336	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00140_ch_T0001832;gene_id=HG00140_ch_G0000691;Parent=HG00140_ch_T0001832;transcript_name=HG00140_ch_T0001832;gene_name=ENSG00000293280;ID=intron:HG00140_ch_T0001832:1;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2596337	2596449	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00140_ch_T0001832;gene_id=HG00140_ch_G0000691;Parent=HG00140_ch_T0001832;transcript_name=HG00140_ch_T0001832;gene_name=ENSG00000293280;ID=exon:HG00140_ch_T0001832:2;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2596450	2596902	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00140_ch_T0001832;gene_id=HG00140_ch_G0000691;Parent=HG00140_ch_T0001832;transcript_name=HG00140_ch_T0001832;gene_name=ENSG00000293280;ID=intron:HG00140_ch_T0001832:2;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2596903	2597006	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00140_ch_T0001832;gene_id=HG00140_ch_G0000691;Parent=HG00140_ch_T0001832;transcript_name=HG00140_ch_T0001832;gene_name=ENSG00000293280;ID=exon:HG00140_ch_T0001832:3;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2597007	2599714	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00140_ch_T0001832;gene_id=HG00140_ch_G0000691;Parent=HG00140_ch_T0001832;transcript_name=HG00140_ch_T0001832;gene_name=ENSG00000293280;ID=intron:HG00140_ch_T0001832:3;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2599715	2599892	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00140_ch_T0001832;gene_id=HG00140_ch_G0000691;Parent=HG00140_ch_T0001832;transcript_name=HG00140_ch_T0001832;gene_name=ENSG00000293280;ID=exon:HG00140_ch_T0001832:4;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2599893	2601827	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00140_ch_T0001832;gene_id=HG00140_ch_G0000691;Parent=HG00140_ch_T0001832;transcript_name=HG00140_ch_T0001832;gene_name=ENSG00000293280;ID=intron:HG00140_ch_T0001832:4;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2601828	2601980	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00140_ch_T0001832;gene_id=HG00140_ch_G0000691;Parent=HG00140_ch_T0001832;transcript_name=HG00140_ch_T0001832;gene_name=ENSG00000293280;ID=exon:HG00140_ch_T0001832:5;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2601981	2603987	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00140_ch_T0001832;gene_id=HG00140_ch_G0000691;Parent=HG00140_ch_T0001832;transcript_name=HG00140_ch_T0001832;gene_name=ENSG00000293280;ID=intron:HG00140_ch_T0001832:5;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2603988	2604102	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00140_ch_T0001832;gene_id=HG00140_ch_G0000691;Parent=HG00140_ch_T0001832;transcript_name=HG00140_ch_T0001832;gene_name=ENSG00000293280;ID=exon:HG00140_ch_T0001832:6;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2604103	2608034	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00140_ch_T0001832;gene_id=HG00140_ch_G0000691;Parent=HG00140_ch_T0001832;transcript_name=HG00140_ch_T0001832;gene_name=ENSG00000293280;ID=intron:HG00140_ch_T0001832:6;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2608035	2608456	.	+	.	source_transcript=ENST00000400476.3;source_transcript_name=ENST00000400476;source_gene=ENSG00000293280.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000293280.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000400476.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000400476.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000293280;transcript_id=HG00140_ch_T0001832;gene_id=HG00140_ch_G0000691;Parent=HG00140_ch_T0001832;transcript_name=HG00140_ch_T0001832;gene_name=ENSG00000293280;ID=exon:HG00140_ch_T0001832:7;Name=ENSG00000293280;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	2596341	2605975	.	+	.	source_gene_common_name=RBMY2DP;source_gene=ENSG00000215507.11;alternative_source_transcripts=ENST00000448575.5,ENST00000448575.5;gene_id=HG00140_ch_G0000692;gene_biotype=transcribed_processed_pseudogene;gene_name=RBMY2DP;gene_sources=liftoff;ID=HG00140_ch_G0000692;Name=RBMY2DP
HG00140_chrY_random0000005	CAT	transcript	2596341	2605975	1000	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;alternative_source_transcripts=ENST00000448575.5,ENST00000448575.5;transcript_id=HG00140_ch_T0001833;gene_id=HG00140_ch_G0000692;Parent=HG00140_ch_G0000692;transcript_name=HG00140_ch_T0001833;gene_name=RBMY2DP;ID=HG00140_ch_T0001833;Name=RBMY2DP
HG00140_chrY_random0000005	CAT	exon	2596341	2596449	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;alternative_source_transcripts=ENST00000448575.5,ENST00000448575.5;transcript_id=HG00140_ch_T0001833;gene_id=HG00140_ch_G0000692;Parent=HG00140_ch_T0001833;transcript_name=HG00140_ch_T0001833;gene_name=RBMY2DP;ID=exon:HG00140_ch_T0001833:0;Name=RBMY2DP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2596450	2596902	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;alternative_source_transcripts=ENST00000448575.5,ENST00000448575.5;transcript_id=HG00140_ch_T0001833;gene_id=HG00140_ch_G0000692;Parent=HG00140_ch_T0001833;transcript_name=HG00140_ch_T0001833;gene_name=RBMY2DP;ID=intron:HG00140_ch_T0001833:0;Name=RBMY2DP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2596903	2597006	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;alternative_source_transcripts=ENST00000448575.5,ENST00000448575.5;transcript_id=HG00140_ch_T0001833;gene_id=HG00140_ch_G0000692;Parent=HG00140_ch_T0001833;transcript_name=HG00140_ch_T0001833;gene_name=RBMY2DP;ID=exon:HG00140_ch_T0001833:1;Name=RBMY2DP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2597007	2599714	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;alternative_source_transcripts=ENST00000448575.5,ENST00000448575.5;transcript_id=HG00140_ch_T0001833;gene_id=HG00140_ch_G0000692;Parent=HG00140_ch_T0001833;transcript_name=HG00140_ch_T0001833;gene_name=RBMY2DP;ID=intron:HG00140_ch_T0001833:1;Name=RBMY2DP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2599715	2599892	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;alternative_source_transcripts=ENST00000448575.5,ENST00000448575.5;transcript_id=HG00140_ch_T0001833;gene_id=HG00140_ch_G0000692;Parent=HG00140_ch_T0001833;transcript_name=HG00140_ch_T0001833;gene_name=RBMY2DP;ID=exon:HG00140_ch_T0001833:2;Name=RBMY2DP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2599893	2601827	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;alternative_source_transcripts=ENST00000448575.5,ENST00000448575.5;transcript_id=HG00140_ch_T0001833;gene_id=HG00140_ch_G0000692;Parent=HG00140_ch_T0001833;transcript_name=HG00140_ch_T0001833;gene_name=RBMY2DP;ID=intron:HG00140_ch_T0001833:2;Name=RBMY2DP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2601828	2601980	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;alternative_source_transcripts=ENST00000448575.5,ENST00000448575.5;transcript_id=HG00140_ch_T0001833;gene_id=HG00140_ch_G0000692;Parent=HG00140_ch_T0001833;transcript_name=HG00140_ch_T0001833;gene_name=RBMY2DP;ID=exon:HG00140_ch_T0001833:3;Name=RBMY2DP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2601981	2603987	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;alternative_source_transcripts=ENST00000448575.5,ENST00000448575.5;transcript_id=HG00140_ch_T0001833;gene_id=HG00140_ch_G0000692;Parent=HG00140_ch_T0001833;transcript_name=HG00140_ch_T0001833;gene_name=RBMY2DP;ID=intron:HG00140_ch_T0001833:3;Name=RBMY2DP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2603988	2604102	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;alternative_source_transcripts=ENST00000448575.5,ENST00000448575.5;transcript_id=HG00140_ch_T0001833;gene_id=HG00140_ch_G0000692;Parent=HG00140_ch_T0001833;transcript_name=HG00140_ch_T0001833;gene_name=RBMY2DP;ID=exon:HG00140_ch_T0001833:4;Name=RBMY2DP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2604103	2604971	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;alternative_source_transcripts=ENST00000448575.5,ENST00000448575.5;transcript_id=HG00140_ch_T0001833;gene_id=HG00140_ch_G0000692;Parent=HG00140_ch_T0001833;transcript_name=HG00140_ch_T0001833;gene_name=RBMY2DP;ID=intron:HG00140_ch_T0001833:4;Name=RBMY2DP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2604972	2605082	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;alternative_source_transcripts=ENST00000448575.5,ENST00000448575.5;transcript_id=HG00140_ch_T0001833;gene_id=HG00140_ch_G0000692;Parent=HG00140_ch_T0001833;transcript_name=HG00140_ch_T0001833;gene_name=RBMY2DP;ID=exon:HG00140_ch_T0001833:5;Name=RBMY2DP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2605083	2605164	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;alternative_source_transcripts=ENST00000448575.5,ENST00000448575.5;transcript_id=HG00140_ch_T0001833;gene_id=HG00140_ch_G0000692;Parent=HG00140_ch_T0001833;transcript_name=HG00140_ch_T0001833;gene_name=RBMY2DP;ID=intron:HG00140_ch_T0001833:5;Name=RBMY2DP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2605165	2605252	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;alternative_source_transcripts=ENST00000448575.5,ENST00000448575.5;transcript_id=HG00140_ch_T0001833;gene_id=HG00140_ch_G0000692;Parent=HG00140_ch_T0001833;transcript_name=HG00140_ch_T0001833;gene_name=RBMY2DP;ID=exon:HG00140_ch_T0001833:6;Name=RBMY2DP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2605253	2605676	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;alternative_source_transcripts=ENST00000448575.5,ENST00000448575.5;transcript_id=HG00140_ch_T0001833;gene_id=HG00140_ch_G0000692;Parent=HG00140_ch_T0001833;transcript_name=HG00140_ch_T0001833;gene_name=RBMY2DP;ID=intron:HG00140_ch_T0001833:6;Name=RBMY2DP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2605677	2605975	.	+	.	source_transcript=ENST00000448881.5;source_transcript_name=RBMY2DP-201;source_gene=ENSG00000215507.11;source_gene_biotype=transcribed_processed_pseudogene;original_gene_id=ENSG00000215507.11;gene_biotype=transcribed_processed_pseudogene;transcript_biotype=transcribed_processed_pseudogene;alignment_id=ENST00000448881.5;alignment_mode=liftoff;normalized_transcript_id=ENST00000448881.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2DP;alternative_source_transcripts=ENST00000448575.5,ENST00000448575.5;transcript_id=HG00140_ch_T0001833;gene_id=HG00140_ch_G0000692;Parent=HG00140_ch_T0001833;transcript_name=HG00140_ch_T0001833;gene_name=RBMY2DP;ID=exon:HG00140_ch_T0001833:7;Name=RBMY2DP;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	gene	2632063	2642985	.	-	.	source_gene_common_name=ENSG00000299596;source_gene=ENSG00000299596.1;gene_id=HG00140_ch_G0000693;gene_biotype=lncRNA;gene_name=ENSG00000299596;gene_sources=liftoff;ID=HG00140_ch_G0000693;Name=ENSG00000299596
HG00140_chrY_random0000005	CAT	transcript	2632063	2642985	1000	-	.	source_transcript=ENST00000764963.1;source_transcript_name=ENST00000764963;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764963.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001834;gene_id=HG00140_ch_G0000693;Parent=HG00140_ch_G0000693;transcript_name=HG00140_ch_T0001834;gene_name=ENSG00000299596;ID=HG00140_ch_T0001834;Name=ENSG00000299596
HG00140_chrY_random0000005	CAT	exon	2632063	2632354	.	-	.	source_transcript=ENST00000764963.1;source_transcript_name=ENST00000764963;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001834;gene_id=HG00140_ch_G0000693;Parent=HG00140_ch_T0001834;transcript_name=HG00140_ch_T0001834;gene_name=ENSG00000299596;ID=exon:HG00140_ch_T0001834:0;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2632355	2634283	.	-	.	source_transcript=ENST00000764963.1;source_transcript_name=ENST00000764963;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001834;gene_id=HG00140_ch_G0000693;Parent=HG00140_ch_T0001834;transcript_name=HG00140_ch_T0001834;gene_name=ENSG00000299596;ID=intron:HG00140_ch_T0001834:0;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2634284	2634315	.	-	.	source_transcript=ENST00000764963.1;source_transcript_name=ENST00000764963;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001834;gene_id=HG00140_ch_G0000693;Parent=HG00140_ch_T0001834;transcript_name=HG00140_ch_T0001834;gene_name=ENSG00000299596;ID=exon:HG00140_ch_T0001834:1;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	intron	2634316	2642943	.	-	.	source_transcript=ENST00000764963.1;source_transcript_name=ENST00000764963;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001834;gene_id=HG00140_ch_G0000693;Parent=HG00140_ch_T0001834;transcript_name=HG00140_ch_T0001834;gene_name=ENSG00000299596;ID=intron:HG00140_ch_T0001834:1;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	exon	2642944	2642985	.	-	.	source_transcript=ENST00000764963.1;source_transcript_name=ENST00000764963;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764963.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764963.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001834;gene_id=HG00140_ch_G0000693;Parent=HG00140_ch_T0001834;transcript_name=HG00140_ch_T0001834;gene_name=ENSG00000299596;ID=exon:HG00140_ch_T0001834:2;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000005	CAT	transcript	2642574	2642985	1000	-	.	source_transcript=ENST00000764964.1;source_transcript_name=ENST00000764964;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764964.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764964.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001835;gene_id=HG00140_ch_G0000693;Parent=HG00140_ch_G0000693;transcript_name=HG00140_ch_T0001835;gene_name=ENSG00000299596;ID=HG00140_ch_T0001835;Name=ENSG00000299596
HG00140_chrY_random0000005	CAT	exon	2642574	2642985	.	-	.	source_transcript=ENST00000764964.1;source_transcript_name=ENST00000764964;source_gene=ENSG00000299596.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000299596.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000764964.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000764964.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000299596;transcript_id=HG00140_ch_T0001835;gene_id=HG00140_ch_G0000693;Parent=HG00140_ch_T0001835;transcript_name=HG00140_ch_T0001835;gene_name=ENSG00000299596;ID=exon:HG00140_ch_T0001835:0;Name=ENSG00000299596;rna_support=False;reference_support=False
HG00140_chrY_random0000060	CAT	gene	132	7145	.	-	.	source_gene_common_name=OFD1P5Y;source_gene=ENSG00000240438.2;gene_id=HG00140_ch_G0000694;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=OFD1P5Y;gene_sources=transMap;ID=HG00140_ch_G0000694;Name=OFD1P5Y
HG00140_chrY_random0000060	CAT	transcript	132	7145	1000	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=transMap;normalized_transcript_id=ENST00000447585.2;transcript_score=214.65;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00140_ch_T0001836;gene_id=HG00140_ch_G0000694;Parent=HG00140_ch_G0000694;transcript_name=HG00140_ch_T0001836;gene_name=OFD1P5Y;ID=HG00140_ch_T0001836;Name=OFD1P5Y
HG00140_chrY_random0000060	CAT	exon	132	303	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=transMap;normalized_transcript_id=ENST00000447585.2;transcript_score=214.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00140_ch_T0001836;gene_id=HG00140_ch_G0000694;Parent=HG00140_ch_T0001836;transcript_name=HG00140_ch_T0001836;gene_name=OFD1P5Y;ID=exon:HG00140_ch_T0001836:0;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00140_chrY_random0000060	CAT	intron	304	5087	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=transMap;normalized_transcript_id=ENST00000447585.2;transcript_score=214.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00140_ch_T0001836;gene_id=HG00140_ch_G0000694;Parent=HG00140_ch_T0001836;transcript_name=HG00140_ch_T0001836;gene_name=OFD1P5Y;ID=intron:HG00140_ch_T0001836:0;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00140_chrY_random0000060	CAT	exon	5088	5224	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=transMap;normalized_transcript_id=ENST00000447585.2;transcript_score=214.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00140_ch_T0001836;gene_id=HG00140_ch_G0000694;Parent=HG00140_ch_T0001836;transcript_name=HG00140_ch_T0001836;gene_name=OFD1P5Y;ID=exon:HG00140_ch_T0001836:1;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00140_chrY_random0000060	CAT	intron	5225	7040	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=transMap;normalized_transcript_id=ENST00000447585.2;transcript_score=214.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00140_ch_T0001836;gene_id=HG00140_ch_G0000694;Parent=HG00140_ch_T0001836;transcript_name=HG00140_ch_T0001836;gene_name=OFD1P5Y;ID=intron:HG00140_ch_T0001836:1;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00140_chrY_random0000060	CAT	exon	7041	7145	.	-	.	source_transcript=ENST00000447585.2;source_transcript_name=OFD1P5Y-201;source_gene=ENSG00000240438.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000240438.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000447585.2;alignment_mode=transMap;normalized_transcript_id=ENST00000447585.2;transcript_score=214.65;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P5Y;transcript_id=HG00140_ch_T0001836;gene_id=HG00140_ch_G0000694;Parent=HG00140_ch_T0001836;transcript_name=HG00140_ch_T0001836;gene_name=OFD1P5Y;ID=exon:HG00140_ch_T0001836:2;Name=OFD1P5Y;rna_support=False;reference_support=False
HG00140_chrY_random0000060	CAT	gene	19636	24858	.	-	.	source_gene_common_name=ENSG00000302211;source_gene=ENSG00000302211.1;gene_id=HG00140_ch_G0000695;gene_biotype=lncRNA;gene_name=ENSG00000302211;gene_sources=liftoff;ID=HG00140_ch_G0000695;Name=ENSG00000302211
HG00140_chrY_random0000060	CAT	transcript	19636	24782	1000	-	.	source_transcript=ENST00000785015.1;source_transcript_name=ENST00000785015;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785015.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=HG00140_ch_T0001837;gene_id=HG00140_ch_G0000695;Parent=HG00140_ch_G0000695;transcript_name=HG00140_ch_T0001837;gene_name=ENSG00000302211;ID=HG00140_ch_T0001837;Name=ENSG00000302211
HG00140_chrY_random0000060	CAT	exon	19636	19874	.	-	.	source_transcript=ENST00000785015.1;source_transcript_name=ENST00000785015;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=HG00140_ch_T0001837;gene_id=HG00140_ch_G0000695;Parent=HG00140_ch_T0001837;transcript_name=HG00140_ch_T0001837;gene_name=ENSG00000302211;ID=exon:HG00140_ch_T0001837:0;Name=ENSG00000302211;rna_support=False;reference_support=False
HG00140_chrY_random0000060	CAT	intron	19875	22896	.	-	.	source_transcript=ENST00000785015.1;source_transcript_name=ENST00000785015;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=HG00140_ch_T0001837;gene_id=HG00140_ch_G0000695;Parent=HG00140_ch_T0001837;transcript_name=HG00140_ch_T0001837;gene_name=ENSG00000302211;ID=intron:HG00140_ch_T0001837:0;Name=ENSG00000302211;rna_support=False;reference_support=False
HG00140_chrY_random0000060	CAT	exon	22897	23099	.	-	.	source_transcript=ENST00000785015.1;source_transcript_name=ENST00000785015;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=HG00140_ch_T0001837;gene_id=HG00140_ch_G0000695;Parent=HG00140_ch_T0001837;transcript_name=HG00140_ch_T0001837;gene_name=ENSG00000302211;ID=exon:HG00140_ch_T0001837:1;Name=ENSG00000302211;rna_support=False;reference_support=False
HG00140_chrY_random0000060	CAT	intron	23100	24153	.	-	.	source_transcript=ENST00000785015.1;source_transcript_name=ENST00000785015;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=HG00140_ch_T0001837;gene_id=HG00140_ch_G0000695;Parent=HG00140_ch_T0001837;transcript_name=HG00140_ch_T0001837;gene_name=ENSG00000302211;ID=intron:HG00140_ch_T0001837:1;Name=ENSG00000302211;rna_support=False;reference_support=False
HG00140_chrY_random0000060	CAT	exon	24154	24252	.	-	.	source_transcript=ENST00000785015.1;source_transcript_name=ENST00000785015;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=HG00140_ch_T0001837;gene_id=HG00140_ch_G0000695;Parent=HG00140_ch_T0001837;transcript_name=HG00140_ch_T0001837;gene_name=ENSG00000302211;ID=exon:HG00140_ch_T0001837:2;Name=ENSG00000302211;rna_support=False;reference_support=False
HG00140_chrY_random0000060	CAT	intron	24253	24726	.	-	.	source_transcript=ENST00000785015.1;source_transcript_name=ENST00000785015;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=HG00140_ch_T0001837;gene_id=HG00140_ch_G0000695;Parent=HG00140_ch_T0001837;transcript_name=HG00140_ch_T0001837;gene_name=ENSG00000302211;ID=intron:HG00140_ch_T0001837:2;Name=ENSG00000302211;rna_support=False;reference_support=False
HG00140_chrY_random0000060	CAT	exon	24727	24782	.	-	.	source_transcript=ENST00000785015.1;source_transcript_name=ENST00000785015;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785015.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785015.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=HG00140_ch_T0001837;gene_id=HG00140_ch_G0000695;Parent=HG00140_ch_T0001837;transcript_name=HG00140_ch_T0001837;gene_name=ENSG00000302211;ID=exon:HG00140_ch_T0001837:3;Name=ENSG00000302211;rna_support=False;reference_support=False
HG00140_chrY_random0000060	CAT	transcript	22524	24858	1000	-	.	source_transcript=ENST00000785016.1;source_transcript_name=ENST00000785016;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785016.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=HG00140_ch_T0001838;gene_id=HG00140_ch_G0000695;Parent=HG00140_ch_G0000695;transcript_name=HG00140_ch_T0001838;gene_name=ENSG00000302211;ID=HG00140_ch_T0001838;Name=ENSG00000302211
HG00140_chrY_random0000060	CAT	exon	22524	23099	.	-	.	source_transcript=ENST00000785016.1;source_transcript_name=ENST00000785016;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=HG00140_ch_T0001838;gene_id=HG00140_ch_G0000695;Parent=HG00140_ch_T0001838;transcript_name=HG00140_ch_T0001838;gene_name=ENSG00000302211;ID=exon:HG00140_ch_T0001838:0;Name=ENSG00000302211;rna_support=False;reference_support=False
HG00140_chrY_random0000060	CAT	intron	23100	24153	.	-	.	source_transcript=ENST00000785016.1;source_transcript_name=ENST00000785016;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=HG00140_ch_T0001838;gene_id=HG00140_ch_G0000695;Parent=HG00140_ch_T0001838;transcript_name=HG00140_ch_T0001838;gene_name=ENSG00000302211;ID=intron:HG00140_ch_T0001838:0;Name=ENSG00000302211;rna_support=False;reference_support=False
HG00140_chrY_random0000060	CAT	exon	24154	24252	.	-	.	source_transcript=ENST00000785016.1;source_transcript_name=ENST00000785016;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=HG00140_ch_T0001838;gene_id=HG00140_ch_G0000695;Parent=HG00140_ch_T0001838;transcript_name=HG00140_ch_T0001838;gene_name=ENSG00000302211;ID=exon:HG00140_ch_T0001838:1;Name=ENSG00000302211;rna_support=False;reference_support=False
HG00140_chrY_random0000060	CAT	intron	24253	24726	.	-	.	source_transcript=ENST00000785016.1;source_transcript_name=ENST00000785016;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=HG00140_ch_T0001838;gene_id=HG00140_ch_G0000695;Parent=HG00140_ch_T0001838;transcript_name=HG00140_ch_T0001838;gene_name=ENSG00000302211;ID=intron:HG00140_ch_T0001838:1;Name=ENSG00000302211;rna_support=False;reference_support=False
HG00140_chrY_random0000060	CAT	exon	24727	24858	.	-	.	source_transcript=ENST00000785016.1;source_transcript_name=ENST00000785016;source_gene=ENSG00000302211.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000302211.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000785016.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000785016.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000302211;transcript_id=HG00140_ch_T0001838;gene_id=HG00140_ch_G0000695;Parent=HG00140_ch_T0001838;transcript_name=HG00140_ch_T0001838;gene_name=ENSG00000302211;ID=exon:HG00140_ch_T0001838:2;Name=ENSG00000302211;rna_support=False;reference_support=False
HG00140_chrY_random0000060	CAT	gene	42278	42948	.	+	.	source_gene_common_name=TRAPPC2P7;source_gene=ENSG00000249606.1;alternative_source_transcripts=ENST00000509650.1,ENST00000509650.1;gene_id=HG00140_ch_G0000696;gene_biotype=unprocessed_pseudogene;gene_name=TRAPPC2P7;gene_sources=liftoff;ID=HG00140_ch_G0000696;Name=TRAPPC2P7
HG00140_chrY_random0000060	CAT	transcript	42278	42948	1000	+	.	source_transcript=ENST00000509650.1;source_transcript_name=TRAPPC2P7-201;source_gene=ENSG00000249606.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249606.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509650.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509650.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P7;alternative_source_transcripts=ENST00000509650.1,ENST00000509650.1;transcript_id=HG00140_ch_T0001839;gene_id=HG00140_ch_G0000696;Parent=HG00140_ch_G0000696;transcript_name=HG00140_ch_T0001839;gene_name=TRAPPC2P7;ID=HG00140_ch_T0001839;Name=TRAPPC2P7
HG00140_chrY_random0000060	CAT	exon	42278	42422	.	+	.	source_transcript=ENST00000509650.1;source_transcript_name=TRAPPC2P7-201;source_gene=ENSG00000249606.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249606.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509650.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509650.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P7;alternative_source_transcripts=ENST00000509650.1,ENST00000509650.1;transcript_id=HG00140_ch_T0001839;gene_id=HG00140_ch_G0000696;Parent=HG00140_ch_T0001839;transcript_name=HG00140_ch_T0001839;gene_name=TRAPPC2P7;ID=exon:HG00140_ch_T0001839:0;Name=TRAPPC2P7;rna_support=False;reference_support=False
HG00140_chrY_random0000060	CAT	intron	42423	42862	.	+	.	source_transcript=ENST00000509650.1;source_transcript_name=TRAPPC2P7-201;source_gene=ENSG00000249606.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249606.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509650.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509650.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P7;alternative_source_transcripts=ENST00000509650.1,ENST00000509650.1;transcript_id=HG00140_ch_T0001839;gene_id=HG00140_ch_G0000696;Parent=HG00140_ch_T0001839;transcript_name=HG00140_ch_T0001839;gene_name=TRAPPC2P7;ID=intron:HG00140_ch_T0001839:0;Name=TRAPPC2P7;rna_support=False;reference_support=False
HG00140_chrY_random0000060	CAT	exon	42863	42948	.	+	.	source_transcript=ENST00000509650.1;source_transcript_name=TRAPPC2P7-201;source_gene=ENSG00000249606.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249606.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000509650.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000509650.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P7;alternative_source_transcripts=ENST00000509650.1,ENST00000509650.1;transcript_id=HG00140_ch_T0001839;gene_id=HG00140_ch_G0000696;Parent=HG00140_ch_T0001839;transcript_name=HG00140_ch_T0001839;gene_name=TRAPPC2P7;ID=exon:HG00140_ch_T0001839:1;Name=TRAPPC2P7;rna_support=False;reference_support=False
HG00140_chrY_random0000060	CAT	gene	48186	48794	.	-	.	source_gene_common_name=RAB9AP4;source_gene=ENSG00000235479.1;alternative_source_transcripts=ENST00000415230.1,ENST00000415230.1;gene_id=HG00140_ch_G0000697;gene_biotype=unprocessed_pseudogene;gene_name=RAB9AP4;gene_sources=liftoff;ID=HG00140_ch_G0000697;Name=RAB9AP4
HG00140_chrY_random0000060	CAT	transcript	48186	48794	1000	-	.	source_transcript=ENST00000415230.1;source_transcript_name=RAB9AP4-201;source_gene=ENSG00000235479.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235479.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415230.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP4;alternative_source_transcripts=ENST00000415230.1,ENST00000415230.1;transcript_id=HG00140_ch_T0001840;gene_id=HG00140_ch_G0000697;Parent=HG00140_ch_G0000697;transcript_name=HG00140_ch_T0001840;gene_name=RAB9AP4;ID=HG00140_ch_T0001840;Name=RAB9AP4
HG00140_chrY_random0000060	CAT	exon	48186	48794	.	-	.	source_transcript=ENST00000415230.1;source_transcript_name=RAB9AP4-201;source_gene=ENSG00000235479.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235479.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000415230.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415230.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RAB9AP4;alternative_source_transcripts=ENST00000415230.1,ENST00000415230.1;transcript_id=HG00140_ch_T0001840;gene_id=HG00140_ch_G0000697;Parent=HG00140_ch_T0001840;transcript_name=HG00140_ch_T0001840;gene_name=RAB9AP4;ID=exon:HG00140_ch_T0001840:0;Name=RAB9AP4;rna_support=False;reference_support=False
HG00140_chrY_random0000060	CAT	gene	69376	69607	.	-	.	source_gene_common_name=ENSG00000301107;source_gene=ENSG00000301107.1;gene_id=HG00140_ch_G0000698;gene_biotype=lncRNA;gene_name=ENSG00000301107;gene_sources=transMap;ID=HG00140_ch_G0000698;Name=ENSG00000301107
HG00140_chrY_random0000060	CAT	transcript	69376	69607	1000	-	.	source_transcript=ENST00000776238.1;source_transcript_name=ENST00000776238;source_gene=ENSG00000301107.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301107.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776238.1;alignment_mode=transMap;normalized_transcript_id=ENST00000776238.1;transcript_score=157.143;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301107;transcript_id=HG00140_ch_T0001841;gene_id=HG00140_ch_G0000698;Parent=HG00140_ch_G0000698;transcript_name=HG00140_ch_T0001841;gene_name=ENSG00000301107;ID=HG00140_ch_T0001841;Name=ENSG00000301107
HG00140_chrY_random0000060	CAT	exon	69376	69607	.	-	.	source_transcript=ENST00000776238.1;source_transcript_name=ENST00000776238;source_gene=ENSG00000301107.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000301107.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000776238.1;alignment_mode=transMap;normalized_transcript_id=ENST00000776238.1;transcript_score=157.143;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000301107;transcript_id=HG00140_ch_T0001841;gene_id=HG00140_ch_G0000698;Parent=HG00140_ch_T0001841;transcript_name=HG00140_ch_T0001841;gene_name=ENSG00000301107;ID=exon:HG00140_ch_T0001841:0;Name=ENSG00000301107;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	gene	16487	21887	.	-	.	source_gene_common_name=HSFY2;source_gene=ENSG00000169953.12;gene_id=HG00140_ch_G0000699;gene_biotype=protein_coding;gene_name=HSFY2;gene_sources=liftoff;ID=HG00140_ch_G0000699;Name=HSFY2
HG00140_chrY_random0000061	CAT	transcript	16487	21867	1000	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;transcript_id=HG00140_ch_T0001842;gene_id=HG00140_ch_G0000699;Parent=HG00140_ch_G0000699;transcript_name=HG00140_ch_T0001842;gene_name=HSFY2;ID=HG00140_ch_T0001842;Name=HSFY2
HG00140_chrY_random0000061	CAT	exon	16487	16641	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;transcript_id=HG00140_ch_T0001842;gene_id=HG00140_ch_G0000699;Parent=HG00140_ch_T0001842;transcript_name=HG00140_ch_T0001842;gene_name=HSFY2;ID=exon:HG00140_ch_T0001842:0;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	intron	16642	17688	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;transcript_id=HG00140_ch_T0001842;gene_id=HG00140_ch_G0000699;Parent=HG00140_ch_T0001842;transcript_name=HG00140_ch_T0001842;gene_name=HSFY2;ID=intron:HG00140_ch_T0001842:0;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	exon	17689	17775	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;transcript_id=HG00140_ch_T0001842;gene_id=HG00140_ch_G0000699;Parent=HG00140_ch_T0001842;transcript_name=HG00140_ch_T0001842;gene_name=HSFY2;ID=exon:HG00140_ch_T0001842:1;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	intron	17776	18334	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;transcript_id=HG00140_ch_T0001842;gene_id=HG00140_ch_G0000699;Parent=HG00140_ch_T0001842;transcript_name=HG00140_ch_T0001842;gene_name=HSFY2;ID=intron:HG00140_ch_T0001842:1;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	exon	18335	18444	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;transcript_id=HG00140_ch_T0001842;gene_id=HG00140_ch_G0000699;Parent=HG00140_ch_T0001842;transcript_name=HG00140_ch_T0001842;gene_name=HSFY2;ID=exon:HG00140_ch_T0001842:2;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	intron	18445	21257	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;transcript_id=HG00140_ch_T0001842;gene_id=HG00140_ch_G0000699;Parent=HG00140_ch_T0001842;transcript_name=HG00140_ch_T0001842;gene_name=HSFY2;ID=intron:HG00140_ch_T0001842:2;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	exon	21258	21867	.	-	.	source_transcript=ENST00000491902.1;source_transcript_name=HSFY2-204;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding_CDS_not_defined;alignment_id=ENST00000491902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000491902.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;transcript_id=HG00140_ch_T0001842;gene_id=HG00140_ch_G0000699;Parent=HG00140_ch_T0001842;transcript_name=HG00140_ch_T0001842;gene_name=HSFY2;ID=exon:HG00140_ch_T0001842:3;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	transcript	17077	21838	100	-	.	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;transcript_id=HG00140_ch_T0001843;gene_id=HG00140_ch_G0000699;Parent=HG00140_ch_G0000699;transcript_name=HG00140_ch_T0001843;gene_name=HSFY2;ID=HG00140_ch_T0001843;Name=HSFY2
HG00140_chrY_random0000061	CAT	exon	17077	17775	.	-	.	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;transcript_id=HG00140_ch_T0001843;gene_id=HG00140_ch_G0000699;Parent=HG00140_ch_T0001843;transcript_name=HG00140_ch_T0001843;gene_name=HSFY2;ID=exon:HG00140_ch_T0001843:0;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	CDS	17754	17775	.	-	1	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;transcript_id=HG00140_ch_T0001843;gene_id=HG00140_ch_G0000699;Parent=HG00140_ch_T0001843;transcript_name=HG00140_ch_T0001843;gene_name=HSFY2;ID=CDS:HG00140_ch_T0001843:0;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	stop_codon	17754	17756	.	-	0	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;transcript_id=HG00140_ch_T0001843;gene_id=HG00140_ch_G0000699;Parent=HG00140_ch_T0001843;transcript_name=HG00140_ch_T0001843;gene_name=HSFY2;ID=stop_codon:HG00140_ch_T0001843;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	intron	17776	18334	.	-	.	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;transcript_id=HG00140_ch_T0001843;gene_id=HG00140_ch_G0000699;Parent=HG00140_ch_T0001843;transcript_name=HG00140_ch_T0001843;gene_name=HSFY2;ID=intron:HG00140_ch_T0001843:0;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	exon	18335	18444	.	-	.	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;transcript_id=HG00140_ch_T0001843;gene_id=HG00140_ch_G0000699;Parent=HG00140_ch_T0001843;transcript_name=HG00140_ch_T0001843;gene_name=HSFY2;ID=exon:HG00140_ch_T0001843:1;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	CDS	18335	18444	.	-	0	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;transcript_id=HG00140_ch_T0001843;gene_id=HG00140_ch_G0000699;Parent=HG00140_ch_T0001843;transcript_name=HG00140_ch_T0001843;gene_name=HSFY2;ID=CDS:HG00140_ch_T0001843:1;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	intron	18445	21257	.	-	.	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;transcript_id=HG00140_ch_T0001843;gene_id=HG00140_ch_G0000699;Parent=HG00140_ch_T0001843;transcript_name=HG00140_ch_T0001843;gene_name=HSFY2;ID=intron:HG00140_ch_T0001843:1;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	exon	21258	21838	.	-	.	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;transcript_id=HG00140_ch_T0001843;gene_id=HG00140_ch_G0000699;Parent=HG00140_ch_T0001843;transcript_name=HG00140_ch_T0001843;gene_name=HSFY2;ID=exon:HG00140_ch_T0001843:2;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	CDS	21258	21770	.	-	0	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;transcript_id=HG00140_ch_T0001843;gene_id=HG00140_ch_G0000699;Parent=HG00140_ch_T0001843;transcript_name=HG00140_ch_T0001843;gene_name=HSFY2;ID=CDS:HG00140_ch_T0001843:2;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	start_codon	21768	21770	.	-	0	source_transcript=ENST00000382852.1;source_transcript_name=HSFY2-203;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382852.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000382852.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;transcript_id=HG00140_ch_T0001843;gene_id=HG00140_ch_G0000699;Parent=HG00140_ch_T0001843;transcript_name=HG00140_ch_T0001843;gene_name=HSFY2;ID=start_codon:HG00140_ch_T0001843;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	transcript	19966	21887	100	-	.	source_transcript=ENST00000304790.3;source_transcript_name=HSFY2-201;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000304790.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000304790.3;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;transcript_id=HG00140_ch_T0001844;gene_id=HG00140_ch_G0000699;Parent=HG00140_ch_G0000699;transcript_name=HG00140_ch_T0001844;gene_name=HSFY2;ID=HG00140_ch_T0001844;Name=HSFY2
HG00140_chrY_random0000061	CAT	exon	19966	20779	.	-	.	source_transcript=ENST00000304790.3;source_transcript_name=HSFY2-201;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000304790.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000304790.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;transcript_id=HG00140_ch_T0001844;gene_id=HG00140_ch_G0000699;Parent=HG00140_ch_T0001844;transcript_name=HG00140_ch_T0001844;gene_name=HSFY2;ID=exon:HG00140_ch_T0001844:0;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	CDS	20087	20779	.	-	0	source_transcript=ENST00000304790.3;source_transcript_name=HSFY2-201;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000304790.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000304790.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;transcript_id=HG00140_ch_T0001844;gene_id=HG00140_ch_G0000699;Parent=HG00140_ch_T0001844;transcript_name=HG00140_ch_T0001844;gene_name=HSFY2;ID=CDS:HG00140_ch_T0001844:0;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	stop_codon	20087	20089	.	-	0	source_transcript=ENST00000304790.3;source_transcript_name=HSFY2-201;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000304790.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000304790.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;transcript_id=HG00140_ch_T0001844;gene_id=HG00140_ch_G0000699;Parent=HG00140_ch_T0001844;transcript_name=HG00140_ch_T0001844;gene_name=HSFY2;ID=stop_codon:HG00140_ch_T0001844;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	intron	20780	21257	.	-	.	source_transcript=ENST00000304790.3;source_transcript_name=HSFY2-201;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000304790.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000304790.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;transcript_id=HG00140_ch_T0001844;gene_id=HG00140_ch_G0000699;Parent=HG00140_ch_T0001844;transcript_name=HG00140_ch_T0001844;gene_name=HSFY2;ID=intron:HG00140_ch_T0001844:0;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	exon	21258	21887	.	-	.	source_transcript=ENST00000304790.3;source_transcript_name=HSFY2-201;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000304790.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000304790.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;transcript_id=HG00140_ch_T0001844;gene_id=HG00140_ch_G0000699;Parent=HG00140_ch_T0001844;transcript_name=HG00140_ch_T0001844;gene_name=HSFY2;ID=exon:HG00140_ch_T0001844:1;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	CDS	21258	21770	.	-	0	source_transcript=ENST00000304790.3;source_transcript_name=HSFY2-201;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000304790.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000304790.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;transcript_id=HG00140_ch_T0001844;gene_id=HG00140_ch_G0000699;Parent=HG00140_ch_T0001844;transcript_name=HG00140_ch_T0001844;gene_name=HSFY2;ID=CDS:HG00140_ch_T0001844:1;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	start_codon	21768	21770	.	-	0	source_transcript=ENST00000304790.3;source_transcript_name=HSFY2-201;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000304790.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000304790.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;transcript_id=HG00140_ch_T0001844;gene_id=HG00140_ch_G0000699;Parent=HG00140_ch_T0001844;transcript_name=HG00140_ch_T0001844;gene_name=HSFY2;ID=start_codon:HG00140_ch_T0001844;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	transcript	21258	21867	100	-	.	source_transcript=ENST00000344884.4;source_transcript_name=HSFY2-202;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000344884.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344884.4;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;transcript_id=HG00140_ch_T0001845;gene_id=HG00140_ch_G0000699;Parent=HG00140_ch_G0000699;transcript_name=HG00140_ch_T0001845;gene_name=HSFY2;ID=HG00140_ch_T0001845;Name=HSFY2
HG00140_chrY_random0000061	CAT	exon	21258	21867	.	-	.	source_transcript=ENST00000344884.4;source_transcript_name=HSFY2-202;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000344884.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344884.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;transcript_id=HG00140_ch_T0001845;gene_id=HG00140_ch_G0000699;Parent=HG00140_ch_T0001845;transcript_name=HG00140_ch_T0001845;gene_name=HSFY2;ID=exon:HG00140_ch_T0001845:0;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	CDS	21258	21770	.	-	0	source_transcript=ENST00000344884.4;source_transcript_name=HSFY2-202;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000344884.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344884.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;transcript_id=HG00140_ch_T0001845;gene_id=HG00140_ch_G0000699;Parent=HG00140_ch_T0001845;transcript_name=HG00140_ch_T0001845;gene_name=HSFY2;ID=CDS:HG00140_ch_T0001845:0;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	stop_codon	21258	21260	.	-	0	source_transcript=ENST00000344884.4;source_transcript_name=HSFY2-202;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000344884.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344884.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;transcript_id=HG00140_ch_T0001845;gene_id=HG00140_ch_G0000699;Parent=HG00140_ch_T0001845;transcript_name=HG00140_ch_T0001845;gene_name=HSFY2;ID=stop_codon:HG00140_ch_T0001845;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	start_codon	21768	21770	.	-	0	source_transcript=ENST00000344884.4;source_transcript_name=HSFY2-202;source_gene=ENSG00000169953.12;source_gene_biotype=protein_coding;original_gene_id=ENSG00000169953.12;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000344884.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000344884.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;transcript_id=HG00140_ch_T0001845;gene_id=HG00140_ch_G0000699;Parent=HG00140_ch_T0001845;transcript_name=HG00140_ch_T0001845;gene_name=HSFY2;ID=start_codon:HG00140_ch_T0001845;Name=HSFY2;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	gene	24431	27579	.	-	.	source_gene_common_name=USP9YP2;source_gene=ENSG00000249501.1;gene_id=HG00140_ch_G0000700;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP2;gene_sources=liftoff;ID=HG00140_ch_G0000700;Name=USP9YP2
HG00140_chrY_random0000061	CAT	transcript	24431	27579	1000	-	.	source_transcript=ENST00000504503.1;source_transcript_name=USP9YP2-201;source_gene=ENSG00000249501.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249501.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000504503.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000504503.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP2;transcript_id=HG00140_ch_T0001846;gene_id=HG00140_ch_G0000700;Parent=HG00140_ch_G0000700;transcript_name=HG00140_ch_T0001846;gene_name=USP9YP2;ID=HG00140_ch_T0001846;Name=USP9YP2
HG00140_chrY_random0000061	CAT	exon	24431	24555	.	-	.	source_transcript=ENST00000504503.1;source_transcript_name=USP9YP2-201;source_gene=ENSG00000249501.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249501.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000504503.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000504503.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP2;transcript_id=HG00140_ch_T0001846;gene_id=HG00140_ch_G0000700;Parent=HG00140_ch_T0001846;transcript_name=HG00140_ch_T0001846;gene_name=USP9YP2;ID=exon:HG00140_ch_T0001846:0;Name=USP9YP2;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	intron	24556	24967	.	-	.	source_transcript=ENST00000504503.1;source_transcript_name=USP9YP2-201;source_gene=ENSG00000249501.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249501.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000504503.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000504503.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP2;transcript_id=HG00140_ch_T0001846;gene_id=HG00140_ch_G0000700;Parent=HG00140_ch_T0001846;transcript_name=HG00140_ch_T0001846;gene_name=USP9YP2;ID=intron:HG00140_ch_T0001846:0;Name=USP9YP2;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	exon	24968	25713	.	-	.	source_transcript=ENST00000504503.1;source_transcript_name=USP9YP2-201;source_gene=ENSG00000249501.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249501.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000504503.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000504503.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP2;transcript_id=HG00140_ch_T0001846;gene_id=HG00140_ch_G0000700;Parent=HG00140_ch_T0001846;transcript_name=HG00140_ch_T0001846;gene_name=USP9YP2;ID=exon:HG00140_ch_T0001846:1;Name=USP9YP2;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	intron	25714	27450	.	-	.	source_transcript=ENST00000504503.1;source_transcript_name=USP9YP2-201;source_gene=ENSG00000249501.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249501.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000504503.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000504503.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP2;transcript_id=HG00140_ch_T0001846;gene_id=HG00140_ch_G0000700;Parent=HG00140_ch_T0001846;transcript_name=HG00140_ch_T0001846;gene_name=USP9YP2;ID=intron:HG00140_ch_T0001846:1;Name=USP9YP2;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	exon	27451	27579	.	-	.	source_transcript=ENST00000504503.1;source_transcript_name=USP9YP2-201;source_gene=ENSG00000249501.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249501.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000504503.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000504503.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP2;transcript_id=HG00140_ch_T0001846;gene_id=HG00140_ch_G0000700;Parent=HG00140_ch_T0001846;transcript_name=HG00140_ch_T0001846;gene_name=USP9YP2;ID=exon:HG00140_ch_T0001846:2;Name=USP9YP2;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	gene	35903	36233	.	+	.	source_gene_common_name=ELOCP7;source_gene=ENSG00000230377.1;alternative_source_transcripts=ENST00000439968.1,ENST00000439968.1;gene_id=HG00140_ch_G0000701;gene_biotype=processed_pseudogene;gene_name=ELOCP7;gene_sources=liftoff;ID=HG00140_ch_G0000701;Name=ELOCP7
HG00140_chrY_random0000061	CAT	transcript	35903	36233	1000	+	.	source_transcript=ENST00000439968.1;source_transcript_name=ELOCP7-201;source_gene=ENSG00000230377.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000230377.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000439968.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439968.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP7;alternative_source_transcripts=ENST00000439968.1,ENST00000439968.1;transcript_id=HG00140_ch_T0001847;gene_id=HG00140_ch_G0000701;Parent=HG00140_ch_G0000701;transcript_name=HG00140_ch_T0001847;gene_name=ELOCP7;ID=HG00140_ch_T0001847;Name=ELOCP7
HG00140_chrY_random0000061	CAT	exon	35903	36233	.	+	.	source_transcript=ENST00000439968.1;source_transcript_name=ELOCP7-201;source_gene=ENSG00000230377.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000230377.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000439968.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000439968.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP7;alternative_source_transcripts=ENST00000439968.1,ENST00000439968.1;transcript_id=HG00140_ch_T0001847;gene_id=HG00140_ch_G0000701;Parent=HG00140_ch_T0001847;transcript_name=HG00140_ch_T0001847;gene_name=ELOCP7;ID=exon:HG00140_ch_T0001847:0;Name=ELOCP7;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	gene	59491	59982	.	-	.	source_gene_common_name=XKRYP1;source_gene=ENSG00000238067.1;alternative_source_transcripts=ENST00000423438.1,ENST00000423438.1;gene_id=HG00140_ch_G0000702;gene_biotype=unprocessed_pseudogene;gene_name=XKRYP1;gene_sources=liftoff;ID=HG00140_ch_G0000702;Name=XKRYP1
HG00140_chrY_random0000061	CAT	transcript	59491	59982	1000	-	.	source_transcript=ENST00000423438.1;source_transcript_name=XKRYP1-201;source_gene=ENSG00000238067.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238067.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423438.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP1;alternative_source_transcripts=ENST00000423438.1,ENST00000423438.1;transcript_id=HG00140_ch_T0001848;gene_id=HG00140_ch_G0000702;Parent=HG00140_ch_G0000702;transcript_name=HG00140_ch_T0001848;gene_name=XKRYP1;ID=HG00140_ch_T0001848;Name=XKRYP1
HG00140_chrY_random0000061	CAT	exon	59491	59982	.	-	.	source_transcript=ENST00000423438.1;source_transcript_name=XKRYP1-201;source_gene=ENSG00000238067.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238067.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000423438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000423438.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP1;alternative_source_transcripts=ENST00000423438.1,ENST00000423438.1;transcript_id=HG00140_ch_T0001848;gene_id=HG00140_ch_G0000702;Parent=HG00140_ch_T0001848;transcript_name=HG00140_ch_T0001848;gene_name=XKRYP1;ID=exon:HG00140_ch_T0001848:0;Name=XKRYP1;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	gene	74261	77638	.	+	.	source_gene_common_name=USP9YP10;source_gene=ENSG00000238135.1;gene_id=HG00140_ch_G0000703;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP10;gene_sources=liftoff;ID=HG00140_ch_G0000703;Name=USP9YP10
HG00140_chrY_random0000061	CAT	transcript	74261	77638	1000	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=HG00140_ch_T0001849;gene_id=HG00140_ch_G0000703;Parent=HG00140_ch_G0000703;transcript_name=HG00140_ch_T0001849;gene_name=USP9YP10;ID=HG00140_ch_T0001849;Name=USP9YP10
HG00140_chrY_random0000061	CAT	exon	74261	74481	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=HG00140_ch_T0001849;gene_id=HG00140_ch_G0000703;Parent=HG00140_ch_T0001849;transcript_name=HG00140_ch_T0001849;gene_name=USP9YP10;ID=exon:HG00140_ch_T0001849:0;Name=USP9YP10;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	intron	74482	75250	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=HG00140_ch_T0001849;gene_id=HG00140_ch_G0000703;Parent=HG00140_ch_T0001849;transcript_name=HG00140_ch_T0001849;gene_name=USP9YP10;ID=intron:HG00140_ch_T0001849:0;Name=USP9YP10;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	exon	75251	75372	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=HG00140_ch_T0001849;gene_id=HG00140_ch_G0000703;Parent=HG00140_ch_T0001849;transcript_name=HG00140_ch_T0001849;gene_name=USP9YP10;ID=exon:HG00140_ch_T0001849:1;Name=USP9YP10;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	intron	75373	75450	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=HG00140_ch_T0001849;gene_id=HG00140_ch_G0000703;Parent=HG00140_ch_T0001849;transcript_name=HG00140_ch_T0001849;gene_name=USP9YP10;ID=intron:HG00140_ch_T0001849:1;Name=USP9YP10;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	exon	75451	75544	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=HG00140_ch_T0001849;gene_id=HG00140_ch_G0000703;Parent=HG00140_ch_T0001849;transcript_name=HG00140_ch_T0001849;gene_name=USP9YP10;ID=exon:HG00140_ch_T0001849:2;Name=USP9YP10;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	intron	75545	77449	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=HG00140_ch_T0001849;gene_id=HG00140_ch_G0000703;Parent=HG00140_ch_T0001849;transcript_name=HG00140_ch_T0001849;gene_name=USP9YP10;ID=intron:HG00140_ch_T0001849:2;Name=USP9YP10;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	exon	77450	77638	.	+	.	source_transcript=ENST00000454868.1;source_transcript_name=USP9YP10-201;source_gene=ENSG00000238135.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000238135.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000454868.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000454868.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP10;transcript_id=HG00140_ch_T0001849;gene_id=HG00140_ch_G0000703;Parent=HG00140_ch_T0001849;transcript_name=HG00140_ch_T0001849;gene_name=USP9YP10;ID=exon:HG00140_ch_T0001849:3;Name=USP9YP10;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	gene	81153	87473	.	-	.	source_gene_common_name=USP9YP14;source_gene=ENSG00000227494.2;gene_id=HG00140_ch_G0000704;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=USP9YP14;gene_sources=liftoff;ID=HG00140_ch_G0000704;Name=USP9YP14
HG00140_chrY_random0000061	CAT	transcript	81153	87473	1000	-	.	source_transcript=ENST00000430663.2;source_transcript_name=USP9YP14-201;source_gene=ENSG00000227494.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227494.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000430663.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430663.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP14;transcript_id=HG00140_ch_T0001850;gene_id=HG00140_ch_G0000704;Parent=HG00140_ch_G0000704;transcript_name=HG00140_ch_T0001850;gene_name=USP9YP14;ID=HG00140_ch_T0001850;Name=USP9YP14
HG00140_chrY_random0000061	CAT	exon	81153	81248	.	-	.	source_transcript=ENST00000430663.2;source_transcript_name=USP9YP14-201;source_gene=ENSG00000227494.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227494.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000430663.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430663.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP14;transcript_id=HG00140_ch_T0001850;gene_id=HG00140_ch_G0000704;Parent=HG00140_ch_T0001850;transcript_name=HG00140_ch_T0001850;gene_name=USP9YP14;ID=exon:HG00140_ch_T0001850:0;Name=USP9YP14;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	intron	81249	81624	.	-	.	source_transcript=ENST00000430663.2;source_transcript_name=USP9YP14-201;source_gene=ENSG00000227494.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227494.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000430663.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430663.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP14;transcript_id=HG00140_ch_T0001850;gene_id=HG00140_ch_G0000704;Parent=HG00140_ch_T0001850;transcript_name=HG00140_ch_T0001850;gene_name=USP9YP14;ID=intron:HG00140_ch_T0001850:0;Name=USP9YP14;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	exon	81625	81800	.	-	.	source_transcript=ENST00000430663.2;source_transcript_name=USP9YP14-201;source_gene=ENSG00000227494.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227494.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000430663.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430663.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP14;transcript_id=HG00140_ch_T0001850;gene_id=HG00140_ch_G0000704;Parent=HG00140_ch_T0001850;transcript_name=HG00140_ch_T0001850;gene_name=USP9YP14;ID=exon:HG00140_ch_T0001850:1;Name=USP9YP14;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	intron	81801	82212	.	-	.	source_transcript=ENST00000430663.2;source_transcript_name=USP9YP14-201;source_gene=ENSG00000227494.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227494.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000430663.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430663.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP14;transcript_id=HG00140_ch_T0001850;gene_id=HG00140_ch_G0000704;Parent=HG00140_ch_T0001850;transcript_name=HG00140_ch_T0001850;gene_name=USP9YP14;ID=intron:HG00140_ch_T0001850:1;Name=USP9YP14;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	exon	82213	82369	.	-	.	source_transcript=ENST00000430663.2;source_transcript_name=USP9YP14-201;source_gene=ENSG00000227494.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227494.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000430663.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430663.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP14;transcript_id=HG00140_ch_T0001850;gene_id=HG00140_ch_G0000704;Parent=HG00140_ch_T0001850;transcript_name=HG00140_ch_T0001850;gene_name=USP9YP14;ID=exon:HG00140_ch_T0001850:2;Name=USP9YP14;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	intron	82370	87339	.	-	.	source_transcript=ENST00000430663.2;source_transcript_name=USP9YP14-201;source_gene=ENSG00000227494.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227494.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000430663.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430663.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP14;transcript_id=HG00140_ch_T0001850;gene_id=HG00140_ch_G0000704;Parent=HG00140_ch_T0001850;transcript_name=HG00140_ch_T0001850;gene_name=USP9YP14;ID=intron:HG00140_ch_T0001850:2;Name=USP9YP14;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	exon	87340	87473	.	-	.	source_transcript=ENST00000430663.2;source_transcript_name=USP9YP14-201;source_gene=ENSG00000227494.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000227494.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000430663.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000430663.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP14;transcript_id=HG00140_ch_T0001850;gene_id=HG00140_ch_G0000704;Parent=HG00140_ch_T0001850;transcript_name=HG00140_ch_T0001850;gene_name=USP9YP14;ID=exon:HG00140_ch_T0001850:3;Name=USP9YP14;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	gene	81891	82052	.	-	.	source_gene_common_name=RNU1-48P;source_gene=ENSG00000252209.1;alternative_source_transcripts=ENST00000516400.1,ENST00000516400.1;gene_id=HG00140_ch_G0000705;gene_biotype=snRNA;gene_name=RNU1-48P;gene_sources=liftoff;ID=HG00140_ch_G0000705;Name=RNU1-48P
HG00140_chrY_random0000061	CAT	transcript	81891	82052	1000	-	.	source_transcript=ENST00000516400.1;source_transcript_name=RNU1-48P-201;source_gene=ENSG00000252209.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252209.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516400.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516400.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-48P;alternative_source_transcripts=ENST00000516400.1,ENST00000516400.1;transcript_id=HG00140_ch_T0001851;gene_id=HG00140_ch_G0000705;Parent=HG00140_ch_G0000705;transcript_name=HG00140_ch_T0001851;gene_name=RNU1-48P;ID=HG00140_ch_T0001851;Name=RNU1-48P
HG00140_chrY_random0000061	CAT	exon	81891	82052	.	-	.	source_transcript=ENST00000516400.1;source_transcript_name=RNU1-48P-201;source_gene=ENSG00000252209.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252209.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516400.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516400.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-48P;alternative_source_transcripts=ENST00000516400.1,ENST00000516400.1;transcript_id=HG00140_ch_T0001851;gene_id=HG00140_ch_G0000705;Parent=HG00140_ch_T0001851;transcript_name=HG00140_ch_T0001851;gene_name=RNU1-48P;ID=exon:HG00140_ch_T0001851:0;Name=RNU1-48P;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	gene	84326	88313	.	-	.	source_gene_common_name=ENSG00000307031;source_gene=ENSG00000307031.1;gene_id=HG00140_ch_G0000706;gene_biotype=lncRNA;gene_name=ENSG00000307031;gene_sources=liftoff;ID=HG00140_ch_G0000706;Name=ENSG00000307031
HG00140_chrY_random0000061	CAT	transcript	84326	88313	1000	-	.	source_transcript=ENST00000823008.1;source_transcript_name=ENST00000823008;source_gene=ENSG00000307031.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307031.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000823008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000823008.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307031;transcript_id=HG00140_ch_T0001852;gene_id=HG00140_ch_G0000706;Parent=HG00140_ch_G0000706;transcript_name=HG00140_ch_T0001852;gene_name=ENSG00000307031;ID=HG00140_ch_T0001852;Name=ENSG00000307031
HG00140_chrY_random0000061	CAT	exon	84326	84567	.	-	.	source_transcript=ENST00000823008.1;source_transcript_name=ENST00000823008;source_gene=ENSG00000307031.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307031.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000823008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000823008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307031;transcript_id=HG00140_ch_T0001852;gene_id=HG00140_ch_G0000706;Parent=HG00140_ch_T0001852;transcript_name=HG00140_ch_T0001852;gene_name=ENSG00000307031;ID=exon:HG00140_ch_T0001852:0;Name=ENSG00000307031;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	intron	84568	87341	.	-	.	source_transcript=ENST00000823008.1;source_transcript_name=ENST00000823008;source_gene=ENSG00000307031.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307031.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000823008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000823008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307031;transcript_id=HG00140_ch_T0001852;gene_id=HG00140_ch_G0000706;Parent=HG00140_ch_T0001852;transcript_name=HG00140_ch_T0001852;gene_name=ENSG00000307031;ID=intron:HG00140_ch_T0001852:0;Name=ENSG00000307031;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	exon	87342	87473	.	-	.	source_transcript=ENST00000823008.1;source_transcript_name=ENST00000823008;source_gene=ENSG00000307031.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307031.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000823008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000823008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307031;transcript_id=HG00140_ch_T0001852;gene_id=HG00140_ch_G0000706;Parent=HG00140_ch_T0001852;transcript_name=HG00140_ch_T0001852;gene_name=ENSG00000307031;ID=exon:HG00140_ch_T0001852:1;Name=ENSG00000307031;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	intron	87474	88091	.	-	.	source_transcript=ENST00000823008.1;source_transcript_name=ENST00000823008;source_gene=ENSG00000307031.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307031.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000823008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000823008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307031;transcript_id=HG00140_ch_T0001852;gene_id=HG00140_ch_G0000706;Parent=HG00140_ch_T0001852;transcript_name=HG00140_ch_T0001852;gene_name=ENSG00000307031;ID=intron:HG00140_ch_T0001852:1;Name=ENSG00000307031;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	exon	88092	88313	.	-	.	source_transcript=ENST00000823008.1;source_transcript_name=ENST00000823008;source_gene=ENSG00000307031.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000307031.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000823008.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000823008.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000307031;transcript_id=HG00140_ch_T0001852;gene_id=HG00140_ch_G0000706;Parent=HG00140_ch_T0001852;transcript_name=HG00140_ch_T0001852;gene_name=ENSG00000307031;ID=exon:HG00140_ch_T0001852:2;Name=ENSG00000307031;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	gene	96441	115430	.	+	.	source_gene_common_name=OFD1P4Y;source_gene=ENSG00000229406.1;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;gene_id=HG00140_ch_G0000707;gene_biotype=unprocessed_pseudogene;gene_name=OFD1P4Y;gene_sources=liftoff;ID=HG00140_ch_G0000707;Name=OFD1P4Y
HG00140_chrY_random0000061	CAT	transcript	96441	115430	1000	+	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG00140_ch_T0001853;gene_id=HG00140_ch_G0000707;Parent=HG00140_ch_G0000707;transcript_name=HG00140_ch_T0001853;gene_name=OFD1P4Y;ID=HG00140_ch_T0001853;Name=OFD1P4Y
HG00140_chrY_random0000061	CAT	exon	96441	96514	.	+	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG00140_ch_T0001853;gene_id=HG00140_ch_G0000707;Parent=HG00140_ch_T0001853;transcript_name=HG00140_ch_T0001853;gene_name=OFD1P4Y;ID=exon:HG00140_ch_T0001853:0;Name=OFD1P4Y;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	intron	96515	97707	.	+	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG00140_ch_T0001853;gene_id=HG00140_ch_G0000707;Parent=HG00140_ch_T0001853;transcript_name=HG00140_ch_T0001853;gene_name=OFD1P4Y;ID=intron:HG00140_ch_T0001853:0;Name=OFD1P4Y;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	exon	97708	97908	.	+	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG00140_ch_T0001853;gene_id=HG00140_ch_G0000707;Parent=HG00140_ch_T0001853;transcript_name=HG00140_ch_T0001853;gene_name=OFD1P4Y;ID=exon:HG00140_ch_T0001853:1;Name=OFD1P4Y;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	intron	97909	100124	.	+	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG00140_ch_T0001853;gene_id=HG00140_ch_G0000707;Parent=HG00140_ch_T0001853;transcript_name=HG00140_ch_T0001853;gene_name=OFD1P4Y;ID=intron:HG00140_ch_T0001853:1;Name=OFD1P4Y;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	exon	100125	100192	.	+	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG00140_ch_T0001853;gene_id=HG00140_ch_G0000707;Parent=HG00140_ch_T0001853;transcript_name=HG00140_ch_T0001853;gene_name=OFD1P4Y;ID=exon:HG00140_ch_T0001853:2;Name=OFD1P4Y;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	intron	100193	100279	.	+	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG00140_ch_T0001853;gene_id=HG00140_ch_G0000707;Parent=HG00140_ch_T0001853;transcript_name=HG00140_ch_T0001853;gene_name=OFD1P4Y;ID=intron:HG00140_ch_T0001853:2;Name=OFD1P4Y;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	exon	100280	100310	.	+	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG00140_ch_T0001853;gene_id=HG00140_ch_G0000707;Parent=HG00140_ch_T0001853;transcript_name=HG00140_ch_T0001853;gene_name=OFD1P4Y;ID=exon:HG00140_ch_T0001853:3;Name=OFD1P4Y;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	intron	100311	104531	.	+	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG00140_ch_T0001853;gene_id=HG00140_ch_G0000707;Parent=HG00140_ch_T0001853;transcript_name=HG00140_ch_T0001853;gene_name=OFD1P4Y;ID=intron:HG00140_ch_T0001853:3;Name=OFD1P4Y;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	exon	104532	104668	.	+	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG00140_ch_T0001853;gene_id=HG00140_ch_G0000707;Parent=HG00140_ch_T0001853;transcript_name=HG00140_ch_T0001853;gene_name=OFD1P4Y;ID=exon:HG00140_ch_T0001853:4;Name=OFD1P4Y;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	intron	104669	104964	.	+	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG00140_ch_T0001853;gene_id=HG00140_ch_G0000707;Parent=HG00140_ch_T0001853;transcript_name=HG00140_ch_T0001853;gene_name=OFD1P4Y;ID=intron:HG00140_ch_T0001853:4;Name=OFD1P4Y;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	exon	104965	105132	.	+	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG00140_ch_T0001853;gene_id=HG00140_ch_G0000707;Parent=HG00140_ch_T0001853;transcript_name=HG00140_ch_T0001853;gene_name=OFD1P4Y;ID=exon:HG00140_ch_T0001853:5;Name=OFD1P4Y;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	intron	105133	108242	.	+	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG00140_ch_T0001853;gene_id=HG00140_ch_G0000707;Parent=HG00140_ch_T0001853;transcript_name=HG00140_ch_T0001853;gene_name=OFD1P4Y;ID=intron:HG00140_ch_T0001853:5;Name=OFD1P4Y;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	exon	108243	108348	.	+	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG00140_ch_T0001853;gene_id=HG00140_ch_G0000707;Parent=HG00140_ch_T0001853;transcript_name=HG00140_ch_T0001853;gene_name=OFD1P4Y;ID=exon:HG00140_ch_T0001853:6;Name=OFD1P4Y;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	intron	108349	110516	.	+	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG00140_ch_T0001853;gene_id=HG00140_ch_G0000707;Parent=HG00140_ch_T0001853;transcript_name=HG00140_ch_T0001853;gene_name=OFD1P4Y;ID=intron:HG00140_ch_T0001853:6;Name=OFD1P4Y;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	exon	110517	110635	.	+	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG00140_ch_T0001853;gene_id=HG00140_ch_G0000707;Parent=HG00140_ch_T0001853;transcript_name=HG00140_ch_T0001853;gene_name=OFD1P4Y;ID=exon:HG00140_ch_T0001853:7;Name=OFD1P4Y;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	intron	110636	112421	.	+	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG00140_ch_T0001853;gene_id=HG00140_ch_G0000707;Parent=HG00140_ch_T0001853;transcript_name=HG00140_ch_T0001853;gene_name=OFD1P4Y;ID=intron:HG00140_ch_T0001853:7;Name=OFD1P4Y;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	exon	112422	112491	.	+	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG00140_ch_T0001853;gene_id=HG00140_ch_G0000707;Parent=HG00140_ch_T0001853;transcript_name=HG00140_ch_T0001853;gene_name=OFD1P4Y;ID=exon:HG00140_ch_T0001853:8;Name=OFD1P4Y;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	intron	112492	113596	.	+	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG00140_ch_T0001853;gene_id=HG00140_ch_G0000707;Parent=HG00140_ch_T0001853;transcript_name=HG00140_ch_T0001853;gene_name=OFD1P4Y;ID=intron:HG00140_ch_T0001853:8;Name=OFD1P4Y;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	exon	113597	113687	.	+	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG00140_ch_T0001853;gene_id=HG00140_ch_G0000707;Parent=HG00140_ch_T0001853;transcript_name=HG00140_ch_T0001853;gene_name=OFD1P4Y;ID=exon:HG00140_ch_T0001853:9;Name=OFD1P4Y;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	intron	113688	115316	.	+	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG00140_ch_T0001853;gene_id=HG00140_ch_G0000707;Parent=HG00140_ch_T0001853;transcript_name=HG00140_ch_T0001853;gene_name=OFD1P4Y;ID=intron:HG00140_ch_T0001853:9;Name=OFD1P4Y;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	exon	115317	115430	.	+	.	source_transcript=ENST00000455273.1;source_transcript_name=OFD1P4Y-201;source_gene=ENSG00000229406.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229406.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455273.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455273.1;transcript_score=299.91499999999996;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P4Y;alternative_source_transcripts=ENST00000455273.1,ENST00000455273.1;transcript_id=HG00140_ch_T0001853;gene_id=HG00140_ch_G0000707;Parent=HG00140_ch_T0001853;transcript_name=HG00140_ch_T0001853;gene_name=OFD1P4Y;ID=exon:HG00140_ch_T0001853:10;Name=OFD1P4Y;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	gene	127461	127789	.	-	.	source_gene_common_name=ELOCP13;source_gene=ENSG00000225716.1;alternative_source_transcripts=ENST00000443934.1,ENST00000443934.1;gene_id=HG00140_ch_G0000708;gene_biotype=processed_pseudogene;gene_name=ELOCP13;gene_sources=liftoff;ID=HG00140_ch_G0000708;Name=ELOCP13
HG00140_chrY_random0000061	CAT	transcript	127461	127789	1000	-	.	source_transcript=ENST00000443934.1;source_transcript_name=ELOCP13-201;source_gene=ENSG00000225716.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225716.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000443934.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443934.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP13;alternative_source_transcripts=ENST00000443934.1,ENST00000443934.1;transcript_id=HG00140_ch_T0001854;gene_id=HG00140_ch_G0000708;Parent=HG00140_ch_G0000708;transcript_name=HG00140_ch_T0001854;gene_name=ELOCP13;ID=HG00140_ch_T0001854;Name=ELOCP13
HG00140_chrY_random0000061	CAT	exon	127461	127789	.	-	.	source_transcript=ENST00000443934.1;source_transcript_name=ELOCP13-201;source_gene=ENSG00000225716.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225716.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000443934.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443934.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP13;alternative_source_transcripts=ENST00000443934.1,ENST00000443934.1;transcript_id=HG00140_ch_T0001854;gene_id=HG00140_ch_G0000708;Parent=HG00140_ch_T0001854;transcript_name=HG00140_ch_T0001854;gene_name=ELOCP13;ID=exon:HG00140_ch_T0001854:0;Name=ELOCP13;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	gene	163528	177584	.	+	.	source_gene_common_name=FAM41AY1;source_gene=ENSG00000224989.2;gene_id=HG00140_ch_G0000709;gene_biotype=lncRNA;gene_name=FAM41AY1;gene_sources=liftoff;ID=HG00140_ch_G0000709;Name=FAM41AY1
HG00140_chrY_random0000061	CAT	transcript	163528	177584	1000	+	.	source_transcript=ENST00000421205.2;source_transcript_name=FAM41AY1-201;source_gene=ENSG00000224989.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224989.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421205.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421205.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;transcript_id=HG00140_ch_T0001855;gene_id=HG00140_ch_G0000709;Parent=HG00140_ch_G0000709;transcript_name=HG00140_ch_T0001855;gene_name=FAM41AY1;ID=HG00140_ch_T0001855;Name=FAM41AY1
HG00140_chrY_random0000061	CAT	exon	163528	163685	.	+	.	source_transcript=ENST00000421205.2;source_transcript_name=FAM41AY1-201;source_gene=ENSG00000224989.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224989.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421205.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421205.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;transcript_id=HG00140_ch_T0001855;gene_id=HG00140_ch_G0000709;Parent=HG00140_ch_T0001855;transcript_name=HG00140_ch_T0001855;gene_name=FAM41AY1;ID=exon:HG00140_ch_T0001855:0;Name=FAM41AY1;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	intron	163686	164280	.	+	.	source_transcript=ENST00000421205.2;source_transcript_name=FAM41AY1-201;source_gene=ENSG00000224989.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224989.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421205.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421205.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;transcript_id=HG00140_ch_T0001855;gene_id=HG00140_ch_G0000709;Parent=HG00140_ch_T0001855;transcript_name=HG00140_ch_T0001855;gene_name=FAM41AY1;ID=intron:HG00140_ch_T0001855:0;Name=FAM41AY1;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	exon	164281	164330	.	+	.	source_transcript=ENST00000421205.2;source_transcript_name=FAM41AY1-201;source_gene=ENSG00000224989.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224989.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421205.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421205.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;transcript_id=HG00140_ch_T0001855;gene_id=HG00140_ch_G0000709;Parent=HG00140_ch_T0001855;transcript_name=HG00140_ch_T0001855;gene_name=FAM41AY1;ID=exon:HG00140_ch_T0001855:1;Name=FAM41AY1;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	intron	164331	175663	.	+	.	source_transcript=ENST00000421205.2;source_transcript_name=FAM41AY1-201;source_gene=ENSG00000224989.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224989.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421205.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421205.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;transcript_id=HG00140_ch_T0001855;gene_id=HG00140_ch_G0000709;Parent=HG00140_ch_T0001855;transcript_name=HG00140_ch_T0001855;gene_name=FAM41AY1;ID=intron:HG00140_ch_T0001855:1;Name=FAM41AY1;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	exon	175664	175792	.	+	.	source_transcript=ENST00000421205.2;source_transcript_name=FAM41AY1-201;source_gene=ENSG00000224989.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224989.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421205.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421205.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;transcript_id=HG00140_ch_T0001855;gene_id=HG00140_ch_G0000709;Parent=HG00140_ch_T0001855;transcript_name=HG00140_ch_T0001855;gene_name=FAM41AY1;ID=exon:HG00140_ch_T0001855:2;Name=FAM41AY1;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	intron	175793	176039	.	+	.	source_transcript=ENST00000421205.2;source_transcript_name=FAM41AY1-201;source_gene=ENSG00000224989.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224989.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421205.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421205.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;transcript_id=HG00140_ch_T0001855;gene_id=HG00140_ch_G0000709;Parent=HG00140_ch_T0001855;transcript_name=HG00140_ch_T0001855;gene_name=FAM41AY1;ID=intron:HG00140_ch_T0001855:2;Name=FAM41AY1;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	exon	176040	176133	.	+	.	source_transcript=ENST00000421205.2;source_transcript_name=FAM41AY1-201;source_gene=ENSG00000224989.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224989.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421205.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421205.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;transcript_id=HG00140_ch_T0001855;gene_id=HG00140_ch_G0000709;Parent=HG00140_ch_T0001855;transcript_name=HG00140_ch_T0001855;gene_name=FAM41AY1;ID=exon:HG00140_ch_T0001855:3;Name=FAM41AY1;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	intron	176134	176726	.	+	.	source_transcript=ENST00000421205.2;source_transcript_name=FAM41AY1-201;source_gene=ENSG00000224989.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224989.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421205.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421205.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;transcript_id=HG00140_ch_T0001855;gene_id=HG00140_ch_G0000709;Parent=HG00140_ch_T0001855;transcript_name=HG00140_ch_T0001855;gene_name=FAM41AY1;ID=intron:HG00140_ch_T0001855:3;Name=FAM41AY1;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	exon	176727	176897	.	+	.	source_transcript=ENST00000421205.2;source_transcript_name=FAM41AY1-201;source_gene=ENSG00000224989.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224989.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421205.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421205.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;transcript_id=HG00140_ch_T0001855;gene_id=HG00140_ch_G0000709;Parent=HG00140_ch_T0001855;transcript_name=HG00140_ch_T0001855;gene_name=FAM41AY1;ID=exon:HG00140_ch_T0001855:4;Name=FAM41AY1;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	intron	176898	177006	.	+	.	source_transcript=ENST00000421205.2;source_transcript_name=FAM41AY1-201;source_gene=ENSG00000224989.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224989.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421205.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421205.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;transcript_id=HG00140_ch_T0001855;gene_id=HG00140_ch_G0000709;Parent=HG00140_ch_T0001855;transcript_name=HG00140_ch_T0001855;gene_name=FAM41AY1;ID=intron:HG00140_ch_T0001855:4;Name=FAM41AY1;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	exon	177007	177100	.	+	.	source_transcript=ENST00000421205.2;source_transcript_name=FAM41AY1-201;source_gene=ENSG00000224989.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224989.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421205.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421205.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;transcript_id=HG00140_ch_T0001855;gene_id=HG00140_ch_G0000709;Parent=HG00140_ch_T0001855;transcript_name=HG00140_ch_T0001855;gene_name=FAM41AY1;ID=exon:HG00140_ch_T0001855:5;Name=FAM41AY1;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	intron	177101	177374	.	+	.	source_transcript=ENST00000421205.2;source_transcript_name=FAM41AY1-201;source_gene=ENSG00000224989.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224989.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421205.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421205.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;transcript_id=HG00140_ch_T0001855;gene_id=HG00140_ch_G0000709;Parent=HG00140_ch_T0001855;transcript_name=HG00140_ch_T0001855;gene_name=FAM41AY1;ID=intron:HG00140_ch_T0001855:5;Name=FAM41AY1;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	exon	177375	177584	.	+	.	source_transcript=ENST00000421205.2;source_transcript_name=FAM41AY1-201;source_gene=ENSG00000224989.2;source_gene_biotype=lncRNA;original_gene_id=ENSG00000224989.2;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000421205.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000421205.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;transcript_id=HG00140_ch_T0001855;gene_id=HG00140_ch_G0000709;Parent=HG00140_ch_T0001855;transcript_name=HG00140_ch_T0001855;gene_name=FAM41AY1;ID=exon:HG00140_ch_T0001855:6;Name=FAM41AY1;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	gene	177068	179281	.	+	.	source_gene_common_name=ENSG00000283076;source_gene=ENSG00000283076.1;gene_id=HG00140_ch_G0000710;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000283076;gene_sources=liftoff;ID=HG00140_ch_G0000710;Name=ENSG00000283076
HG00140_chrY_random0000061	CAT	transcript	177068	179281	1000	+	.	source_transcript=ENST00000635343.1;source_transcript_name=ENST00000635343;source_gene=ENSG00000283076.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000283076.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000635343.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000635343.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000283076;transcript_id=HG00140_ch_T0001856;gene_id=HG00140_ch_G0000710;Parent=HG00140_ch_G0000710;transcript_name=HG00140_ch_T0001856;gene_name=ENSG00000283076;ID=HG00140_ch_T0001856;Name=ENSG00000283076
HG00140_chrY_random0000061	CAT	exon	177068	177276	.	+	.	source_transcript=ENST00000635343.1;source_transcript_name=ENST00000635343;source_gene=ENSG00000283076.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000283076.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000635343.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000635343.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000283076;transcript_id=HG00140_ch_T0001856;gene_id=HG00140_ch_G0000710;Parent=HG00140_ch_T0001856;transcript_name=HG00140_ch_T0001856;gene_name=ENSG00000283076;ID=exon:HG00140_ch_T0001856:0;Name=ENSG00000283076;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	intron	177277	177321	.	+	.	source_transcript=ENST00000635343.1;source_transcript_name=ENST00000635343;source_gene=ENSG00000283076.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000283076.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000635343.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000635343.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000283076;transcript_id=HG00140_ch_T0001856;gene_id=HG00140_ch_G0000710;Parent=HG00140_ch_T0001856;transcript_name=HG00140_ch_T0001856;gene_name=ENSG00000283076;ID=intron:HG00140_ch_T0001856:0;Name=ENSG00000283076;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	exon	177322	177584	.	+	.	source_transcript=ENST00000635343.1;source_transcript_name=ENST00000635343;source_gene=ENSG00000283076.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000283076.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000635343.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000635343.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000283076;transcript_id=HG00140_ch_T0001856;gene_id=HG00140_ch_G0000710;Parent=HG00140_ch_T0001856;transcript_name=HG00140_ch_T0001856;gene_name=ENSG00000283076;ID=exon:HG00140_ch_T0001856:1;Name=ENSG00000283076;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	intron	177585	177714	.	+	.	source_transcript=ENST00000635343.1;source_transcript_name=ENST00000635343;source_gene=ENSG00000283076.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000283076.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000635343.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000635343.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000283076;transcript_id=HG00140_ch_T0001856;gene_id=HG00140_ch_G0000710;Parent=HG00140_ch_T0001856;transcript_name=HG00140_ch_T0001856;gene_name=ENSG00000283076;ID=intron:HG00140_ch_T0001856:1;Name=ENSG00000283076;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	exon	177715	177793	.	+	.	source_transcript=ENST00000635343.1;source_transcript_name=ENST00000635343;source_gene=ENSG00000283076.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000283076.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000635343.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000635343.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000283076;transcript_id=HG00140_ch_T0001856;gene_id=HG00140_ch_G0000710;Parent=HG00140_ch_T0001856;transcript_name=HG00140_ch_T0001856;gene_name=ENSG00000283076;ID=exon:HG00140_ch_T0001856:2;Name=ENSG00000283076;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	intron	177794	178118	.	+	.	source_transcript=ENST00000635343.1;source_transcript_name=ENST00000635343;source_gene=ENSG00000283076.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000283076.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000635343.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000635343.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000283076;transcript_id=HG00140_ch_T0001856;gene_id=HG00140_ch_G0000710;Parent=HG00140_ch_T0001856;transcript_name=HG00140_ch_T0001856;gene_name=ENSG00000283076;ID=intron:HG00140_ch_T0001856:2;Name=ENSG00000283076;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	exon	178119	178213	.	+	.	source_transcript=ENST00000635343.1;source_transcript_name=ENST00000635343;source_gene=ENSG00000283076.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000283076.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000635343.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000635343.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000283076;transcript_id=HG00140_ch_T0001856;gene_id=HG00140_ch_G0000710;Parent=HG00140_ch_T0001856;transcript_name=HG00140_ch_T0001856;gene_name=ENSG00000283076;ID=exon:HG00140_ch_T0001856:3;Name=ENSG00000283076;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	intron	178214	178581	.	+	.	source_transcript=ENST00000635343.1;source_transcript_name=ENST00000635343;source_gene=ENSG00000283076.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000283076.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000635343.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000635343.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000283076;transcript_id=HG00140_ch_T0001856;gene_id=HG00140_ch_G0000710;Parent=HG00140_ch_T0001856;transcript_name=HG00140_ch_T0001856;gene_name=ENSG00000283076;ID=intron:HG00140_ch_T0001856:3;Name=ENSG00000283076;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	exon	178582	178698	.	+	.	source_transcript=ENST00000635343.1;source_transcript_name=ENST00000635343;source_gene=ENSG00000283076.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000283076.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000635343.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000635343.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000283076;transcript_id=HG00140_ch_T0001856;gene_id=HG00140_ch_G0000710;Parent=HG00140_ch_T0001856;transcript_name=HG00140_ch_T0001856;gene_name=ENSG00000283076;ID=exon:HG00140_ch_T0001856:4;Name=ENSG00000283076;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	intron	178699	179154	.	+	.	source_transcript=ENST00000635343.1;source_transcript_name=ENST00000635343;source_gene=ENSG00000283076.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000283076.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000635343.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000635343.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000283076;transcript_id=HG00140_ch_T0001856;gene_id=HG00140_ch_G0000710;Parent=HG00140_ch_T0001856;transcript_name=HG00140_ch_T0001856;gene_name=ENSG00000283076;ID=intron:HG00140_ch_T0001856:4;Name=ENSG00000283076;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	exon	179155	179281	.	+	.	source_transcript=ENST00000635343.1;source_transcript_name=ENST00000635343;source_gene=ENSG00000283076.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000283076.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000635343.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000635343.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000283076;transcript_id=HG00140_ch_T0001856;gene_id=HG00140_ch_G0000710;Parent=HG00140_ch_T0001856;transcript_name=HG00140_ch_T0001856;gene_name=ENSG00000283076;ID=exon:HG00140_ch_T0001856:5;Name=ENSG00000283076;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	gene	179427	181604	.	-	.	source_gene_common_name=TUBB1P1;source_gene=ENSG00000249726.1;alternative_source_transcripts=ENST00000503144.1;gene_id=HG00140_ch_G0000711;gene_biotype=unprocessed_pseudogene;gene_name=TUBB1P1;gene_sources=liftoff,transMap;ID=HG00140_ch_G0000711;Name=TUBB1P1
HG00140_chrY_random0000061	CAT	transcript	179427	181604	1000	-	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=transMap;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;alternative_source_transcripts=ENST00000503144.1;transcript_id=HG00140_ch_T0001857;gene_id=HG00140_ch_G0000711;Parent=HG00140_ch_G0000711;transcript_name=HG00140_ch_T0001857;gene_name=TUBB1P1;ID=HG00140_ch_T0001857;Name=TUBB1P1
HG00140_chrY_random0000061	CAT	exon	179427	180450	.	-	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=transMap;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;alternative_source_transcripts=ENST00000503144.1;transcript_id=HG00140_ch_T0001857;gene_id=HG00140_ch_G0000711;Parent=HG00140_ch_T0001857;transcript_name=HG00140_ch_T0001857;gene_name=TUBB1P1;ID=exon:HG00140_ch_T0001857:0;Name=TUBB1P1;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	intron	180451	180943	.	-	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=transMap;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;alternative_source_transcripts=ENST00000503144.1;transcript_id=HG00140_ch_T0001857;gene_id=HG00140_ch_G0000711;Parent=HG00140_ch_T0001857;transcript_name=HG00140_ch_T0001857;gene_name=TUBB1P1;ID=intron:HG00140_ch_T0001857:0;Name=TUBB1P1;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	exon	180944	181242	.	-	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=transMap;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;alternative_source_transcripts=ENST00000503144.1;transcript_id=HG00140_ch_T0001857;gene_id=HG00140_ch_G0000711;Parent=HG00140_ch_T0001857;transcript_name=HG00140_ch_T0001857;gene_name=TUBB1P1;ID=exon:HG00140_ch_T0001857:1;Name=TUBB1P1;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	intron	181243	181547	.	-	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=transMap;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;alternative_source_transcripts=ENST00000503144.1;transcript_id=HG00140_ch_T0001857;gene_id=HG00140_ch_G0000711;Parent=HG00140_ch_T0001857;transcript_name=HG00140_ch_T0001857;gene_name=TUBB1P1;ID=intron:HG00140_ch_T0001857:1;Name=TUBB1P1;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	exon	181548	181604	.	-	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=transMap;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;alternative_source_transcripts=ENST00000503144.1;transcript_id=HG00140_ch_T0001857;gene_id=HG00140_ch_G0000711;Parent=HG00140_ch_T0001857;transcript_name=HG00140_ch_T0001857;gene_name=TUBB1P1;ID=exon:HG00140_ch_T0001857:2;Name=TUBB1P1;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	transcript	179427	181604	1000	-	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=HG00140_ch_T0001858;gene_id=HG00140_ch_G0000711;Parent=HG00140_ch_G0000711;transcript_name=HG00140_ch_T0001858;gene_name=TUBB1P1;ID=HG00140_ch_T0001858;Name=TUBB1P1
HG00140_chrY_random0000061	CAT	exon	179427	180450	.	-	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=HG00140_ch_T0001858;gene_id=HG00140_ch_G0000711;Parent=HG00140_ch_T0001858;transcript_name=HG00140_ch_T0001858;gene_name=TUBB1P1;ID=exon:HG00140_ch_T0001858:0;Name=TUBB1P1;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	intron	180451	180943	.	-	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=HG00140_ch_T0001858;gene_id=HG00140_ch_G0000711;Parent=HG00140_ch_T0001858;transcript_name=HG00140_ch_T0001858;gene_name=TUBB1P1;ID=intron:HG00140_ch_T0001858:0;Name=TUBB1P1;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	exon	180944	181053	.	-	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=HG00140_ch_T0001858;gene_id=HG00140_ch_G0000711;Parent=HG00140_ch_T0001858;transcript_name=HG00140_ch_T0001858;gene_name=TUBB1P1;ID=exon:HG00140_ch_T0001858:1;Name=TUBB1P1;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	intron	181054	181133	.	-	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=HG00140_ch_T0001858;gene_id=HG00140_ch_G0000711;Parent=HG00140_ch_T0001858;transcript_name=HG00140_ch_T0001858;gene_name=TUBB1P1;ID=intron:HG00140_ch_T0001858:1;Name=TUBB1P1;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	exon	181134	181242	.	-	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=HG00140_ch_T0001858;gene_id=HG00140_ch_G0000711;Parent=HG00140_ch_T0001858;transcript_name=HG00140_ch_T0001858;gene_name=TUBB1P1;ID=exon:HG00140_ch_T0001858:2;Name=TUBB1P1;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	intron	181243	181547	.	-	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=HG00140_ch_T0001858;gene_id=HG00140_ch_G0000711;Parent=HG00140_ch_T0001858;transcript_name=HG00140_ch_T0001858;gene_name=TUBB1P1;ID=intron:HG00140_ch_T0001858:2;Name=TUBB1P1;rna_support=False;reference_support=False
HG00140_chrY_random0000061	CAT	exon	181548	181604	.	-	.	source_transcript=ENST00000503144.1;source_transcript_name=TUBB1P1-201;source_gene=ENSG00000249726.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000249726.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000503144.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000503144.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TUBB1P1;transcript_id=HG00140_ch_T0001858;gene_id=HG00140_ch_G0000711;Parent=HG00140_ch_T0001858;transcript_name=HG00140_ch_T0001858;gene_name=TUBB1P1;ID=exon:HG00140_ch_T0001858:3;Name=TUBB1P1;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	gene	58410	85016	.	-	.	source_gene_common_name=ENSG00000298004;source_gene=ENSG00000298004.1;gene_id=HG00140_ch_G0000712;gene_biotype=lncRNA;gene_name=ENSG00000298004;gene_sources=liftoff;ID=HG00140_ch_G0000712;Name=ENSG00000298004
HG00140_chrY_random0000086	CAT	transcript	58410	84979	1000	-	.	source_transcript=ENST00000752432.1;source_transcript_name=ENST00000752432;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752432.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001859;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_G0000712;transcript_name=HG00140_ch_T0001859;gene_name=ENSG00000298004;ID=HG00140_ch_T0001859;Name=ENSG00000298004
HG00140_chrY_random0000086	CAT	exon	58410	58700	.	-	.	source_transcript=ENST00000752432.1;source_transcript_name=ENST00000752432;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001859;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_T0001859;transcript_name=HG00140_ch_T0001859;gene_name=ENSG00000298004;ID=exon:HG00140_ch_T0001859:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	58701	60293	.	-	.	source_transcript=ENST00000752432.1;source_transcript_name=ENST00000752432;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001859;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_T0001859;transcript_name=HG00140_ch_T0001859;gene_name=ENSG00000298004;ID=intron:HG00140_ch_T0001859:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	60294	60418	.	-	.	source_transcript=ENST00000752432.1;source_transcript_name=ENST00000752432;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001859;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_T0001859;transcript_name=HG00140_ch_T0001859;gene_name=ENSG00000298004;ID=exon:HG00140_ch_T0001859:1;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	60419	61309	.	-	.	source_transcript=ENST00000752432.1;source_transcript_name=ENST00000752432;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001859;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_T0001859;transcript_name=HG00140_ch_T0001859;gene_name=ENSG00000298004;ID=intron:HG00140_ch_T0001859:1;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	61310	61528	.	-	.	source_transcript=ENST00000752432.1;source_transcript_name=ENST00000752432;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001859;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_T0001859;transcript_name=HG00140_ch_T0001859;gene_name=ENSG00000298004;ID=exon:HG00140_ch_T0001859:2;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	61529	84662	.	-	.	source_transcript=ENST00000752432.1;source_transcript_name=ENST00000752432;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001859;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_T0001859;transcript_name=HG00140_ch_T0001859;gene_name=ENSG00000298004;ID=intron:HG00140_ch_T0001859:2;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	84663	84979	.	-	.	source_transcript=ENST00000752432.1;source_transcript_name=ENST00000752432;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001859;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_T0001859;transcript_name=HG00140_ch_T0001859;gene_name=ENSG00000298004;ID=exon:HG00140_ch_T0001859:3;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	transcript	69365	85066	1000	-	.	source_transcript=ENST00000752433.1;source_transcript_name=ENST00000752433;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752433.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001861;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_G0000712;transcript_name=HG00140_ch_T0001861;gene_name=ENSG00000298004;ID=HG00140_ch_T0001861;Name=ENSG00000298004
HG00140_chrY_random0000086	CAT	exon	69365	70408	.	-	.	source_transcript=ENST00000752433.1;source_transcript_name=ENST00000752433;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752433.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001861;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_T0001861;transcript_name=HG00140_ch_T0001861;gene_name=ENSG00000298004;ID=exon:HG00140_ch_T0001861:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	70409	74094	.	-	.	source_transcript=ENST00000752433.1;source_transcript_name=ENST00000752433;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752433.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001861;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_T0001861;transcript_name=HG00140_ch_T0001861;gene_name=ENSG00000298004;ID=intron:HG00140_ch_T0001861:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	74095	74219	.	-	.	source_transcript=ENST00000752433.1;source_transcript_name=ENST00000752433;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752433.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001861;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_T0001861;transcript_name=HG00140_ch_T0001861;gene_name=ENSG00000298004;ID=exon:HG00140_ch_T0001861:1;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	74220	84662	.	-	.	source_transcript=ENST00000752433.1;source_transcript_name=ENST00000752433;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752433.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001861;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_T0001861;transcript_name=HG00140_ch_T0001861;gene_name=ENSG00000298004;ID=intron:HG00140_ch_T0001861:1;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	84663	85066	.	-	.	source_transcript=ENST00000752433.1;source_transcript_name=ENST00000752433;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752433.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752433.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001861;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_T0001861;transcript_name=HG00140_ch_T0001861;gene_name=ENSG00000298004;ID=exon:HG00140_ch_T0001861:2;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	transcript	69368	85016	1000	-	.	source_transcript=ENST00000752434.1;source_transcript_name=ENST00000752434;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752434.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001862;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_G0000712;transcript_name=HG00140_ch_T0001862;gene_name=ENSG00000298004;ID=HG00140_ch_T0001862;Name=ENSG00000298004
HG00140_chrY_random0000086	CAT	exon	69368	70408	.	-	.	source_transcript=ENST00000752434.1;source_transcript_name=ENST00000752434;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752434.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001862;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_T0001862;transcript_name=HG00140_ch_T0001862;gene_name=ENSG00000298004;ID=exon:HG00140_ch_T0001862:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	70409	84662	.	-	.	source_transcript=ENST00000752434.1;source_transcript_name=ENST00000752434;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752434.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001862;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_T0001862;transcript_name=HG00140_ch_T0001862;gene_name=ENSG00000298004;ID=intron:HG00140_ch_T0001862:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	84663	85016	.	-	.	source_transcript=ENST00000752434.1;source_transcript_name=ENST00000752434;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752434.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752434.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001862;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_T0001862;transcript_name=HG00140_ch_T0001862;gene_name=ENSG00000298004;ID=exon:HG00140_ch_T0001862:1;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	transcript	69373	85016	1000	-	.	source_transcript=ENST00000752435.1;source_transcript_name=ENST00000752435;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752435.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001863;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_G0000712;transcript_name=HG00140_ch_T0001863;gene_name=ENSG00000298004;ID=HG00140_ch_T0001863;Name=ENSG00000298004
HG00140_chrY_random0000086	CAT	exon	69373	70408	.	-	.	source_transcript=ENST00000752435.1;source_transcript_name=ENST00000752435;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752435.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001863;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_T0001863;transcript_name=HG00140_ch_T0001863;gene_name=ENSG00000298004;ID=exon:HG00140_ch_T0001863:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	70409	74094	.	-	.	source_transcript=ENST00000752435.1;source_transcript_name=ENST00000752435;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752435.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001863;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_T0001863;transcript_name=HG00140_ch_T0001863;gene_name=ENSG00000298004;ID=intron:HG00140_ch_T0001863:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	74095	74219	.	-	.	source_transcript=ENST00000752435.1;source_transcript_name=ENST00000752435;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752435.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001863;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_T0001863;transcript_name=HG00140_ch_T0001863;gene_name=ENSG00000298004;ID=exon:HG00140_ch_T0001863:1;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	74220	84731	.	-	.	source_transcript=ENST00000752435.1;source_transcript_name=ENST00000752435;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752435.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001863;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_T0001863;transcript_name=HG00140_ch_T0001863;gene_name=ENSG00000298004;ID=intron:HG00140_ch_T0001863:1;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	84732	85016	.	-	.	source_transcript=ENST00000752435.1;source_transcript_name=ENST00000752435;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752435.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752435.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001863;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_T0001863;transcript_name=HG00140_ch_T0001863;gene_name=ENSG00000298004;ID=exon:HG00140_ch_T0001863:2;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	transcript	69373	85010	1000	-	.	source_transcript=ENST00000752436.1;source_transcript_name=ENST00000752436;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752436.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001864;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_G0000712;transcript_name=HG00140_ch_T0001864;gene_name=ENSG00000298004;ID=HG00140_ch_T0001864;Name=ENSG00000298004
HG00140_chrY_random0000086	CAT	exon	69373	70408	.	-	.	source_transcript=ENST00000752436.1;source_transcript_name=ENST00000752436;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752436.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001864;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_T0001864;transcript_name=HG00140_ch_T0001864;gene_name=ENSG00000298004;ID=exon:HG00140_ch_T0001864:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	70409	74094	.	-	.	source_transcript=ENST00000752436.1;source_transcript_name=ENST00000752436;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752436.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001864;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_T0001864;transcript_name=HG00140_ch_T0001864;gene_name=ENSG00000298004;ID=intron:HG00140_ch_T0001864:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	74095	74215	.	-	.	source_transcript=ENST00000752436.1;source_transcript_name=ENST00000752436;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752436.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001864;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_T0001864;transcript_name=HG00140_ch_T0001864;gene_name=ENSG00000298004;ID=exon:HG00140_ch_T0001864:1;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	74216	84662	.	-	.	source_transcript=ENST00000752436.1;source_transcript_name=ENST00000752436;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752436.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001864;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_T0001864;transcript_name=HG00140_ch_T0001864;gene_name=ENSG00000298004;ID=intron:HG00140_ch_T0001864:1;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	84663	85010	.	-	.	source_transcript=ENST00000752436.1;source_transcript_name=ENST00000752436;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752436.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752436.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001864;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_T0001864;transcript_name=HG00140_ch_T0001864;gene_name=ENSG00000298004;ID=exon:HG00140_ch_T0001864:2;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	transcript	69901	84979	1000	-	.	source_transcript=ENST00000752438.1;source_transcript_name=ENST00000752438;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752438.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001865;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_G0000712;transcript_name=HG00140_ch_T0001865;gene_name=ENSG00000298004;ID=HG00140_ch_T0001865;Name=ENSG00000298004
HG00140_chrY_random0000086	CAT	exon	69901	70408	.	-	.	source_transcript=ENST00000752438.1;source_transcript_name=ENST00000752438;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752438.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001865;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_T0001865;transcript_name=HG00140_ch_T0001865;gene_name=ENSG00000298004;ID=exon:HG00140_ch_T0001865:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	70409	84731	.	-	.	source_transcript=ENST00000752438.1;source_transcript_name=ENST00000752438;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752438.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001865;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_T0001865;transcript_name=HG00140_ch_T0001865;gene_name=ENSG00000298004;ID=intron:HG00140_ch_T0001865:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	84732	84979	.	-	.	source_transcript=ENST00000752438.1;source_transcript_name=ENST00000752438;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752438.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752438.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001865;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_T0001865;transcript_name=HG00140_ch_T0001865;gene_name=ENSG00000298004;ID=exon:HG00140_ch_T0001865:1;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	transcript	69904	85006	1000	-	.	source_transcript=ENST00000752437.1;source_transcript_name=ENST00000752437;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752437.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001866;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_G0000712;transcript_name=HG00140_ch_T0001866;gene_name=ENSG00000298004;ID=HG00140_ch_T0001866;Name=ENSG00000298004
HG00140_chrY_random0000086	CAT	exon	69904	70408	.	-	.	source_transcript=ENST00000752437.1;source_transcript_name=ENST00000752437;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752437.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001866;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_T0001866;transcript_name=HG00140_ch_T0001866;gene_name=ENSG00000298004;ID=exon:HG00140_ch_T0001866:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	70409	71023	.	-	.	source_transcript=ENST00000752437.1;source_transcript_name=ENST00000752437;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752437.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001866;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_T0001866;transcript_name=HG00140_ch_T0001866;gene_name=ENSG00000298004;ID=intron:HG00140_ch_T0001866:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	71024	71075	.	-	.	source_transcript=ENST00000752437.1;source_transcript_name=ENST00000752437;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752437.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001866;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_T0001866;transcript_name=HG00140_ch_T0001866;gene_name=ENSG00000298004;ID=exon:HG00140_ch_T0001866:1;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	71076	74094	.	-	.	source_transcript=ENST00000752437.1;source_transcript_name=ENST00000752437;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752437.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001866;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_T0001866;transcript_name=HG00140_ch_T0001866;gene_name=ENSG00000298004;ID=intron:HG00140_ch_T0001866:1;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	74095	74219	.	-	.	source_transcript=ENST00000752437.1;source_transcript_name=ENST00000752437;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752437.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001866;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_T0001866;transcript_name=HG00140_ch_T0001866;gene_name=ENSG00000298004;ID=exon:HG00140_ch_T0001866:2;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	74220	84662	.	-	.	source_transcript=ENST00000752437.1;source_transcript_name=ENST00000752437;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752437.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001866;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_T0001866;transcript_name=HG00140_ch_T0001866;gene_name=ENSG00000298004;ID=intron:HG00140_ch_T0001866:2;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	84663	85006	.	-	.	source_transcript=ENST00000752437.1;source_transcript_name=ENST00000752437;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752437.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752437.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001866;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_T0001866;transcript_name=HG00140_ch_T0001866;gene_name=ENSG00000298004;ID=exon:HG00140_ch_T0001866:3;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	transcript	72772	84990	1000	-	.	source_transcript=ENST00000752439.1;source_transcript_name=ENST00000752439;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752439.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001867;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_G0000712;transcript_name=HG00140_ch_T0001867;gene_name=ENSG00000298004;ID=HG00140_ch_T0001867;Name=ENSG00000298004
HG00140_chrY_random0000086	CAT	exon	72772	74219	.	-	.	source_transcript=ENST00000752439.1;source_transcript_name=ENST00000752439;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001867;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_T0001867;transcript_name=HG00140_ch_T0001867;gene_name=ENSG00000298004;ID=exon:HG00140_ch_T0001867:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	74220	84731	.	-	.	source_transcript=ENST00000752439.1;source_transcript_name=ENST00000752439;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001867;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_T0001867;transcript_name=HG00140_ch_T0001867;gene_name=ENSG00000298004;ID=intron:HG00140_ch_T0001867:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	84732	84990	.	-	.	source_transcript=ENST00000752439.1;source_transcript_name=ENST00000752439;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752439.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752439.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001867;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_T0001867;transcript_name=HG00140_ch_T0001867;gene_name=ENSG00000298004;ID=exon:HG00140_ch_T0001867:1;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	transcript	72923	85104	1000	-	.	source_transcript=ENST00000752440.1;source_transcript_name=ENST00000752440;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752440.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001868;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_G0000712;transcript_name=HG00140_ch_T0001868;gene_name=ENSG00000298004;ID=HG00140_ch_T0001868;Name=ENSG00000298004
HG00140_chrY_random0000086	CAT	exon	72923	74219	.	-	.	source_transcript=ENST00000752440.1;source_transcript_name=ENST00000752440;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001868;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_T0001868;transcript_name=HG00140_ch_T0001868;gene_name=ENSG00000298004;ID=exon:HG00140_ch_T0001868:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	74220	84662	.	-	.	source_transcript=ENST00000752440.1;source_transcript_name=ENST00000752440;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001868;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_T0001868;transcript_name=HG00140_ch_T0001868;gene_name=ENSG00000298004;ID=intron:HG00140_ch_T0001868:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	84663	85104	.	-	.	source_transcript=ENST00000752440.1;source_transcript_name=ENST00000752440;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752440.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752440.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001868;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_T0001868;transcript_name=HG00140_ch_T0001868;gene_name=ENSG00000298004;ID=exon:HG00140_ch_T0001868:1;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	transcript	74056	85006	1000	-	.	source_transcript=ENST00000752441.1;source_transcript_name=ENST00000752441;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752441.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752441.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001869;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_G0000712;transcript_name=HG00140_ch_T0001869;gene_name=ENSG00000298004;ID=HG00140_ch_T0001869;Name=ENSG00000298004
HG00140_chrY_random0000086	CAT	exon	74056	74215	.	-	.	source_transcript=ENST00000752441.1;source_transcript_name=ENST00000752441;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752441.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001869;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_T0001869;transcript_name=HG00140_ch_T0001869;gene_name=ENSG00000298004;ID=exon:HG00140_ch_T0001869:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	74216	84662	.	-	.	source_transcript=ENST00000752441.1;source_transcript_name=ENST00000752441;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752441.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001869;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_T0001869;transcript_name=HG00140_ch_T0001869;gene_name=ENSG00000298004;ID=intron:HG00140_ch_T0001869:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	84663	85006	.	-	.	source_transcript=ENST00000752441.1;source_transcript_name=ENST00000752441;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752441.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001869;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_T0001869;transcript_name=HG00140_ch_T0001869;gene_name=ENSG00000298004;ID=exon:HG00140_ch_T0001869:1;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	transcript	79081	84969	1000	-	.	source_transcript=ENST00000752442.1;source_transcript_name=ENST00000752442;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752442.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752442.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001871;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_G0000712;transcript_name=HG00140_ch_T0001871;gene_name=ENSG00000298004;ID=HG00140_ch_T0001871;Name=ENSG00000298004
HG00140_chrY_random0000086	CAT	exon	79081	79714	.	-	.	source_transcript=ENST00000752442.1;source_transcript_name=ENST00000752442;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752442.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752442.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001871;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_T0001871;transcript_name=HG00140_ch_T0001871;gene_name=ENSG00000298004;ID=exon:HG00140_ch_T0001871:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	79715	84662	.	-	.	source_transcript=ENST00000752442.1;source_transcript_name=ENST00000752442;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752442.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752442.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001871;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_T0001871;transcript_name=HG00140_ch_T0001871;gene_name=ENSG00000298004;ID=intron:HG00140_ch_T0001871:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	84663	84969	.	-	.	source_transcript=ENST00000752442.1;source_transcript_name=ENST00000752442;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752442.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752442.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001871;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_T0001871;transcript_name=HG00140_ch_T0001871;gene_name=ENSG00000298004;ID=exon:HG00140_ch_T0001871:1;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	transcript	82511	85016	1000	-	.	source_transcript=ENST00000752443.1;source_transcript_name=ENST00000752443;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752443.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752443.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001873;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_G0000712;transcript_name=HG00140_ch_T0001873;gene_name=ENSG00000298004;ID=HG00140_ch_T0001873;Name=ENSG00000298004
HG00140_chrY_random0000086	CAT	exon	82511	83074	.	-	.	source_transcript=ENST00000752443.1;source_transcript_name=ENST00000752443;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752443.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752443.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001873;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_T0001873;transcript_name=HG00140_ch_T0001873;gene_name=ENSG00000298004;ID=exon:HG00140_ch_T0001873:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	83075	84662	.	-	.	source_transcript=ENST00000752443.1;source_transcript_name=ENST00000752443;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752443.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752443.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001873;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_T0001873;transcript_name=HG00140_ch_T0001873;gene_name=ENSG00000298004;ID=intron:HG00140_ch_T0001873:0;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	84663	85016	.	-	.	source_transcript=ENST00000752443.1;source_transcript_name=ENST00000752443;source_gene=ENSG00000298004.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000298004.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000752443.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000752443.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000298004;transcript_id=HG00140_ch_T0001873;gene_id=HG00140_ch_G0000712;Parent=HG00140_ch_T0001873;transcript_name=HG00140_ch_T0001873;gene_name=ENSG00000298004;ID=exon:HG00140_ch_T0001873:1;Name=ENSG00000298004;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	gene	61316	63533	.	-	.	source_gene_common_name=ENSG00000275578;source_gene=ENSG00000275578.1;alternative_source_transcripts=ENST00000618226.1;gene_id=HG00140_ch_G0000713;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=ENSG00000275578;gene_sources=liftoff;ID=HG00140_ch_G0000713;Name=ENSG00000275578
HG00140_chrY_random0000086	CAT	transcript	61316	63533	1000	-	.	source_transcript=ENST00000618226.1;source_transcript_name=ENST00000618226;source_gene=ENSG00000275578.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000275578.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618226.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275578;alternative_source_transcripts=ENST00000618226.1;transcript_id=HG00140_ch_T0001860;gene_id=HG00140_ch_G0000713;Parent=HG00140_ch_G0000713;transcript_name=HG00140_ch_T0001860;gene_name=ENSG00000275578;ID=HG00140_ch_T0001860;Name=ENSG00000275578
HG00140_chrY_random0000086	CAT	exon	61316	61526	.	-	.	source_transcript=ENST00000618226.1;source_transcript_name=ENST00000618226;source_gene=ENSG00000275578.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000275578.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275578;alternative_source_transcripts=ENST00000618226.1;transcript_id=HG00140_ch_T0001860;gene_id=HG00140_ch_G0000713;Parent=HG00140_ch_T0001860;transcript_name=HG00140_ch_T0001860;gene_name=ENSG00000275578;ID=exon:HG00140_ch_T0001860:0;Name=ENSG00000275578;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	61527	63346	.	-	.	source_transcript=ENST00000618226.1;source_transcript_name=ENST00000618226;source_gene=ENSG00000275578.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000275578.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275578;alternative_source_transcripts=ENST00000618226.1;transcript_id=HG00140_ch_T0001860;gene_id=HG00140_ch_G0000713;Parent=HG00140_ch_T0001860;transcript_name=HG00140_ch_T0001860;gene_name=ENSG00000275578;ID=intron:HG00140_ch_T0001860:0;Name=ENSG00000275578;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	63347	63533	.	-	.	source_transcript=ENST00000618226.1;source_transcript_name=ENST00000618226;source_gene=ENSG00000275578.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000275578.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000618226.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000618226.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000275578;alternative_source_transcripts=ENST00000618226.1;transcript_id=HG00140_ch_T0001860;gene_id=HG00140_ch_G0000713;Parent=HG00140_ch_T0001860;transcript_name=HG00140_ch_T0001860;gene_name=ENSG00000275578;ID=exon:HG00140_ch_T0001860:1;Name=ENSG00000275578;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	gene	76946	78525	.	+	.	source_gene_common_name=CDY5P;source_gene=ENSG00000226449.1;alternative_source_transcripts=ENST00000411487.1,ENST00000411487.1;gene_id=HG00140_ch_G0000714;gene_biotype=unprocessed_pseudogene;gene_name=CDY5P;gene_sources=liftoff;ID=HG00140_ch_G0000714;Name=CDY5P
HG00140_chrY_random0000086	CAT	transcript	76946	78525	1000	+	.	source_transcript=ENST00000411487.1;source_transcript_name=CDY5P-201;source_gene=ENSG00000226449.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226449.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000411487.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411487.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY5P;alternative_source_transcripts=ENST00000411487.1,ENST00000411487.1;transcript_id=HG00140_ch_T0001870;gene_id=HG00140_ch_G0000714;Parent=HG00140_ch_G0000714;transcript_name=HG00140_ch_T0001870;gene_name=CDY5P;ID=HG00140_ch_T0001870;Name=CDY5P
HG00140_chrY_random0000086	CAT	exon	76946	78525	.	+	.	source_transcript=ENST00000411487.1;source_transcript_name=CDY5P-201;source_gene=ENSG00000226449.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226449.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000411487.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411487.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY5P;alternative_source_transcripts=ENST00000411487.1,ENST00000411487.1;transcript_id=HG00140_ch_T0001870;gene_id=HG00140_ch_G0000714;Parent=HG00140_ch_T0001870;transcript_name=HG00140_ch_T0001870;gene_name=CDY5P;ID=exon:HG00140_ch_T0001870:0;Name=CDY5P;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	gene	82100	82428	.	+	.	source_gene_common_name=ELOCP36;source_gene=ENSG00000225896.1;alternative_source_transcripts=ENST00000425789.1,ENST00000425789.1;gene_id=HG00140_ch_G0000715;gene_biotype=processed_pseudogene;gene_name=ELOCP36;gene_sources=liftoff;ID=HG00140_ch_G0000715;Name=ELOCP36
HG00140_chrY_random0000086	CAT	transcript	82100	82428	1000	+	.	source_transcript=ENST00000425789.1;source_transcript_name=ELOCP36-201;source_gene=ENSG00000225896.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225896.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425789.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP36;alternative_source_transcripts=ENST00000425789.1,ENST00000425789.1;transcript_id=HG00140_ch_T0001872;gene_id=HG00140_ch_G0000715;Parent=HG00140_ch_G0000715;transcript_name=HG00140_ch_T0001872;gene_name=ELOCP36;ID=HG00140_ch_T0001872;Name=ELOCP36
HG00140_chrY_random0000086	CAT	exon	82100	82428	.	+	.	source_transcript=ENST00000425789.1;source_transcript_name=ELOCP36-201;source_gene=ENSG00000225896.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225896.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425789.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425789.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP36;alternative_source_transcripts=ENST00000425789.1,ENST00000425789.1;transcript_id=HG00140_ch_T0001872;gene_id=HG00140_ch_G0000715;Parent=HG00140_ch_T0001872;transcript_name=HG00140_ch_T0001872;gene_name=ELOCP36;ID=exon:HG00140_ch_T0001872:0;Name=ELOCP36;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	gene	112351	113475	.	-	.	source_gene_common_name=ACTG1P11;source_gene=ENSG00000229465.1;alternative_source_transcripts=ENST00000415776.1;gene_id=HG00140_ch_G0000716;gene_biotype=processed_pseudogene;gene_name=ACTG1P11;gene_sources=liftoff;ID=HG00140_ch_G0000716;Name=ACTG1P11
HG00140_chrY_random0000086	CAT	transcript	112351	113475	1000	-	.	source_transcript=ENST00000425411.1;source_transcript_name=ACTG1P11-201;source_gene=ENSG00000229465.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229465.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425411.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425411.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ACTG1P11;alternative_source_transcripts=ENST00000415776.1;transcript_id=HG00140_ch_T0001874;gene_id=HG00140_ch_G0000716;Parent=HG00140_ch_G0000716;transcript_name=HG00140_ch_T0001874;gene_name=ACTG1P11;ID=HG00140_ch_T0001874;Name=ACTG1P11
HG00140_chrY_random0000086	CAT	exon	112351	113475	.	-	.	source_transcript=ENST00000425411.1;source_transcript_name=ACTG1P11-201;source_gene=ENSG00000229465.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229465.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000425411.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000425411.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ACTG1P11;alternative_source_transcripts=ENST00000415776.1;transcript_id=HG00140_ch_T0001874;gene_id=HG00140_ch_G0000716;Parent=HG00140_ch_T0001874;transcript_name=HG00140_ch_T0001874;gene_name=ACTG1P11;ID=exon:HG00140_ch_T0001874:0;Name=ACTG1P11;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	gene	124331	125911	.	-	.	source_gene_common_name=XKRYP7;source_gene=ENSG00000290725.1;gene_id=HG00140_ch_G0000717;gene_biotype=lncRNA;gene_name=XKRYP7;gene_sources=liftoff;ID=HG00140_ch_G0000717;Name=XKRYP7
HG00140_chrY_random0000086	CAT	transcript	124331	125911	1000	-	.	source_transcript=ENST00000623874.1;source_transcript_name=XKRYP7-202;source_gene=ENSG00000290725.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290725.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000623874.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000623874.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP7;transcript_id=HG00140_ch_T0001875;gene_id=HG00140_ch_G0000717;Parent=HG00140_ch_G0000717;transcript_name=HG00140_ch_T0001875;gene_name=XKRYP7;ID=HG00140_ch_T0001875;Name=XKRYP7
HG00140_chrY_random0000086	CAT	exon	124331	125911	.	-	.	source_transcript=ENST00000623874.1;source_transcript_name=XKRYP7-202;source_gene=ENSG00000290725.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290725.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000623874.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000623874.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP7;transcript_id=HG00140_ch_T0001875;gene_id=HG00140_ch_G0000717;Parent=HG00140_ch_T0001875;transcript_name=HG00140_ch_T0001875;gene_name=XKRYP7;ID=exon:HG00140_ch_T0001875:0;Name=XKRYP7;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	gene	124474	132751	.	-	.	source_gene_common_name=XKRYP7;source_gene=ENSG00000244646.5;gene_id=HG00140_ch_G0000718;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=XKRYP7;gene_sources=liftoff;ID=HG00140_ch_G0000718;Name=XKRYP7
HG00140_chrY_random0000086	CAT	transcript	124474	132751	1000	-	.	source_transcript=ENST00000442362.2;source_transcript_name=XKRYP7-201;source_gene=ENSG00000244646.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000244646.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442362.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442362.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP7;transcript_id=HG00140_ch_T0001876;gene_id=HG00140_ch_G0000718;Parent=HG00140_ch_G0000718;transcript_name=HG00140_ch_T0001876;gene_name=XKRYP7;ID=HG00140_ch_T0001876;Name=XKRYP7
HG00140_chrY_random0000086	CAT	exon	124474	125231	.	-	.	source_transcript=ENST00000442362.2;source_transcript_name=XKRYP7-201;source_gene=ENSG00000244646.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000244646.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442362.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442362.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP7;transcript_id=HG00140_ch_T0001876;gene_id=HG00140_ch_G0000718;Parent=HG00140_ch_T0001876;transcript_name=HG00140_ch_T0001876;gene_name=XKRYP7;ID=exon:HG00140_ch_T0001876:0;Name=XKRYP7;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	125232	132416	.	-	.	source_transcript=ENST00000442362.2;source_transcript_name=XKRYP7-201;source_gene=ENSG00000244646.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000244646.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442362.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442362.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP7;transcript_id=HG00140_ch_T0001876;gene_id=HG00140_ch_G0000718;Parent=HG00140_ch_T0001876;transcript_name=HG00140_ch_T0001876;gene_name=XKRYP7;ID=intron:HG00140_ch_T0001876:0;Name=XKRYP7;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	132417	132751	.	-	.	source_transcript=ENST00000442362.2;source_transcript_name=XKRYP7-201;source_gene=ENSG00000244646.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000244646.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000442362.2;alignment_mode=liftoff;normalized_transcript_id=ENST00000442362.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRYP7;transcript_id=HG00140_ch_T0001876;gene_id=HG00140_ch_G0000718;Parent=HG00140_ch_T0001876;transcript_name=HG00140_ch_T0001876;gene_name=XKRYP7;ID=exon:HG00140_ch_T0001876:1;Name=XKRYP7;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	gene	137562	140167	.	+	.	source_gene_common_name=USP9YP23;source_gene=ENSG00000223555.1;alternative_source_transcripts=ENST00000455085.1;gene_id=HG00140_ch_G0000719;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP23;gene_sources=liftoff;ID=HG00140_ch_G0000719;Name=USP9YP23
HG00140_chrY_random0000086	CAT	transcript	137562	140167	1000	+	.	source_transcript=ENST00000455085.1;source_transcript_name=USP9YP23-201;source_gene=ENSG00000223555.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223555.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455085.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455085.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP23;alternative_source_transcripts=ENST00000455085.1;transcript_id=HG00140_ch_T0001877;gene_id=HG00140_ch_G0000719;Parent=HG00140_ch_G0000719;transcript_name=HG00140_ch_T0001877;gene_name=USP9YP23;ID=HG00140_ch_T0001877;Name=USP9YP23
HG00140_chrY_random0000086	CAT	exon	137562	137687	.	+	.	source_transcript=ENST00000455085.1;source_transcript_name=USP9YP23-201;source_gene=ENSG00000223555.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223555.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455085.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455085.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP23;alternative_source_transcripts=ENST00000455085.1;transcript_id=HG00140_ch_T0001877;gene_id=HG00140_ch_G0000719;Parent=HG00140_ch_T0001877;transcript_name=HG00140_ch_T0001877;gene_name=USP9YP23;ID=exon:HG00140_ch_T0001877:0;Name=USP9YP23;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	137688	138261	.	+	.	source_transcript=ENST00000455085.1;source_transcript_name=USP9YP23-201;source_gene=ENSG00000223555.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223555.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455085.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455085.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP23;alternative_source_transcripts=ENST00000455085.1;transcript_id=HG00140_ch_T0001877;gene_id=HG00140_ch_G0000719;Parent=HG00140_ch_T0001877;transcript_name=HG00140_ch_T0001877;gene_name=USP9YP23;ID=intron:HG00140_ch_T0001877:0;Name=USP9YP23;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	138262	138353	.	+	.	source_transcript=ENST00000455085.1;source_transcript_name=USP9YP23-201;source_gene=ENSG00000223555.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223555.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455085.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455085.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP23;alternative_source_transcripts=ENST00000455085.1;transcript_id=HG00140_ch_T0001877;gene_id=HG00140_ch_G0000719;Parent=HG00140_ch_T0001877;transcript_name=HG00140_ch_T0001877;gene_name=USP9YP23;ID=exon:HG00140_ch_T0001877:1;Name=USP9YP23;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	138354	139978	.	+	.	source_transcript=ENST00000455085.1;source_transcript_name=USP9YP23-201;source_gene=ENSG00000223555.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223555.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455085.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455085.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP23;alternative_source_transcripts=ENST00000455085.1;transcript_id=HG00140_ch_T0001877;gene_id=HG00140_ch_G0000719;Parent=HG00140_ch_T0001877;transcript_name=HG00140_ch_T0001877;gene_name=USP9YP23;ID=intron:HG00140_ch_T0001877:1;Name=USP9YP23;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	139979	140167	.	+	.	source_transcript=ENST00000455085.1;source_transcript_name=USP9YP23-201;source_gene=ENSG00000223555.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000223555.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000455085.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000455085.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP23;alternative_source_transcripts=ENST00000455085.1;transcript_id=HG00140_ch_T0001877;gene_id=HG00140_ch_G0000719;Parent=HG00140_ch_T0001877;transcript_name=HG00140_ch_T0001877;gene_name=USP9YP23;ID=exon:HG00140_ch_T0001877:2;Name=USP9YP23;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	gene	143663	144831	.	-	.	source_gene_common_name=USP9YP15;source_gene=ENSG00000233120.1;gene_id=HG00140_ch_G0000720;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP15;gene_sources=liftoff;ID=HG00140_ch_G0000720;Name=USP9YP15
HG00140_chrY_random0000086	CAT	transcript	143663	144831	1000	-	.	source_transcript=ENST00000442391.1;source_transcript_name=USP9YP15-201;source_gene=ENSG00000233120.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233120.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442391.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442391.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP15;transcript_id=HG00140_ch_T0001878;gene_id=HG00140_ch_G0000720;Parent=HG00140_ch_G0000720;transcript_name=HG00140_ch_T0001878;gene_name=USP9YP15;ID=HG00140_ch_T0001878;Name=USP9YP15
HG00140_chrY_random0000086	CAT	exon	143663	143758	.	-	.	source_transcript=ENST00000442391.1;source_transcript_name=USP9YP15-201;source_gene=ENSG00000233120.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233120.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442391.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP15;transcript_id=HG00140_ch_T0001878;gene_id=HG00140_ch_G0000720;Parent=HG00140_ch_T0001878;transcript_name=HG00140_ch_T0001878;gene_name=USP9YP15;ID=exon:HG00140_ch_T0001878:0;Name=USP9YP15;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	143759	144138	.	-	.	source_transcript=ENST00000442391.1;source_transcript_name=USP9YP15-201;source_gene=ENSG00000233120.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233120.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442391.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP15;transcript_id=HG00140_ch_T0001878;gene_id=HG00140_ch_G0000720;Parent=HG00140_ch_T0001878;transcript_name=HG00140_ch_T0001878;gene_name=USP9YP15;ID=intron:HG00140_ch_T0001878:0;Name=USP9YP15;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	144139	144297	.	-	.	source_transcript=ENST00000442391.1;source_transcript_name=USP9YP15-201;source_gene=ENSG00000233120.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233120.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442391.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP15;transcript_id=HG00140_ch_T0001878;gene_id=HG00140_ch_G0000720;Parent=HG00140_ch_T0001878;transcript_name=HG00140_ch_T0001878;gene_name=USP9YP15;ID=exon:HG00140_ch_T0001878:1;Name=USP9YP15;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	144298	144509	.	-	.	source_transcript=ENST00000442391.1;source_transcript_name=USP9YP15-201;source_gene=ENSG00000233120.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233120.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442391.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP15;transcript_id=HG00140_ch_T0001878;gene_id=HG00140_ch_G0000720;Parent=HG00140_ch_T0001878;transcript_name=HG00140_ch_T0001878;gene_name=USP9YP15;ID=intron:HG00140_ch_T0001878:1;Name=USP9YP15;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	144510	144538	.	-	.	source_transcript=ENST00000442391.1;source_transcript_name=USP9YP15-201;source_gene=ENSG00000233120.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233120.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442391.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP15;transcript_id=HG00140_ch_T0001878;gene_id=HG00140_ch_G0000720;Parent=HG00140_ch_T0001878;transcript_name=HG00140_ch_T0001878;gene_name=USP9YP15;ID=exon:HG00140_ch_T0001878:2;Name=USP9YP15;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	144539	144693	.	-	.	source_transcript=ENST00000442391.1;source_transcript_name=USP9YP15-201;source_gene=ENSG00000233120.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233120.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442391.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP15;transcript_id=HG00140_ch_T0001878;gene_id=HG00140_ch_G0000720;Parent=HG00140_ch_T0001878;transcript_name=HG00140_ch_T0001878;gene_name=USP9YP15;ID=intron:HG00140_ch_T0001878:2;Name=USP9YP15;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	144694	144831	.	-	.	source_transcript=ENST00000442391.1;source_transcript_name=USP9YP15-201;source_gene=ENSG00000233120.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233120.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000442391.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000442391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP15;transcript_id=HG00140_ch_T0001878;gene_id=HG00140_ch_G0000720;Parent=HG00140_ch_T0001878;transcript_name=HG00140_ch_T0001878;gene_name=USP9YP15;ID=exon:HG00140_ch_T0001878:3;Name=USP9YP15;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	gene	144351	144510	.	-	.	source_gene_common_name=RNU1-95P;source_gene=ENSG00000252166.1;gene_id=HG00140_ch_G0000721;gene_biotype=snRNA;gene_name=RNU1-95P;gene_sources=liftoff;ID=HG00140_ch_G0000721;Name=RNU1-95P
HG00140_chrY_random0000086	CAT	transcript	144351	144510	1000	-	.	source_transcript=ENST00000516357.1;source_transcript_name=RNU1-95P-201;source_gene=ENSG00000252166.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252166.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516357.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516357.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-95P;transcript_id=HG00140_ch_T0001879;gene_id=HG00140_ch_G0000721;Parent=HG00140_ch_G0000721;transcript_name=HG00140_ch_T0001879;gene_name=RNU1-95P;ID=HG00140_ch_T0001879;Name=RNU1-95P
HG00140_chrY_random0000086	CAT	exon	144351	144510	.	-	.	source_transcript=ENST00000516357.1;source_transcript_name=RNU1-95P-201;source_gene=ENSG00000252166.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252166.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516357.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516357.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-95P;transcript_id=HG00140_ch_T0001879;gene_id=HG00140_ch_G0000721;Parent=HG00140_ch_T0001879;transcript_name=HG00140_ch_T0001879;gene_name=RNU1-95P;ID=exon:HG00140_ch_T0001879:0;Name=RNU1-95P;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	gene	153256	156044	.	-	.	source_gene_common_name=TRAPPC2P8;source_gene=ENSG00000225895.1;gene_id=HG00140_ch_G0000722;gene_biotype=unprocessed_pseudogene;gene_name=TRAPPC2P8;gene_sources=liftoff;ID=HG00140_ch_G0000722;Name=TRAPPC2P8
HG00140_chrY_random0000086	CAT	transcript	153256	156044	1000	-	.	source_transcript=ENST00000440676.1;source_transcript_name=TRAPPC2P8-201;source_gene=ENSG00000225895.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225895.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440676.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P8;transcript_id=HG00140_ch_T0001880;gene_id=HG00140_ch_G0000722;Parent=HG00140_ch_G0000722;transcript_name=HG00140_ch_T0001880;gene_name=TRAPPC2P8;ID=HG00140_ch_T0001880;Name=TRAPPC2P8
HG00140_chrY_random0000086	CAT	exon	153256	153411	.	-	.	source_transcript=ENST00000440676.1;source_transcript_name=TRAPPC2P8-201;source_gene=ENSG00000225895.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225895.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P8;transcript_id=HG00140_ch_T0001880;gene_id=HG00140_ch_G0000722;Parent=HG00140_ch_T0001880;transcript_name=HG00140_ch_T0001880;gene_name=TRAPPC2P8;ID=exon:HG00140_ch_T0001880:0;Name=TRAPPC2P8;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	153412	153855	.	-	.	source_transcript=ENST00000440676.1;source_transcript_name=TRAPPC2P8-201;source_gene=ENSG00000225895.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225895.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P8;transcript_id=HG00140_ch_T0001880;gene_id=HG00140_ch_G0000722;Parent=HG00140_ch_T0001880;transcript_name=HG00140_ch_T0001880;gene_name=TRAPPC2P8;ID=intron:HG00140_ch_T0001880:0;Name=TRAPPC2P8;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	153856	154002	.	-	.	source_transcript=ENST00000440676.1;source_transcript_name=TRAPPC2P8-201;source_gene=ENSG00000225895.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225895.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P8;transcript_id=HG00140_ch_T0001880;gene_id=HG00140_ch_G0000722;Parent=HG00140_ch_T0001880;transcript_name=HG00140_ch_T0001880;gene_name=TRAPPC2P8;ID=exon:HG00140_ch_T0001880:1;Name=TRAPPC2P8;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	154003	155951	.	-	.	source_transcript=ENST00000440676.1;source_transcript_name=TRAPPC2P8-201;source_gene=ENSG00000225895.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225895.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P8;transcript_id=HG00140_ch_T0001880;gene_id=HG00140_ch_G0000722;Parent=HG00140_ch_T0001880;transcript_name=HG00140_ch_T0001880;gene_name=TRAPPC2P8;ID=intron:HG00140_ch_T0001880:1;Name=TRAPPC2P8;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	155952	156044	.	-	.	source_transcript=ENST00000440676.1;source_transcript_name=TRAPPC2P8-201;source_gene=ENSG00000225895.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000225895.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000440676.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000440676.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P8;transcript_id=HG00140_ch_T0001880;gene_id=HG00140_ch_G0000722;Parent=HG00140_ch_T0001880;transcript_name=HG00140_ch_T0001880;gene_name=TRAPPC2P8;ID=exon:HG00140_ch_T0001880:2;Name=TRAPPC2P8;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	gene	165155	180679	.	+	.	source_gene_common_name=OFD1P1Y;source_gene=ENSG00000226011.1;gene_id=HG00140_ch_G0000723;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=OFD1P1Y;gene_sources=liftoff;ID=HG00140_ch_G0000723;Name=OFD1P1Y
HG00140_chrY_random0000086	CAT	transcript	165155	180679	1000	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG00140_ch_T0001881;gene_id=HG00140_ch_G0000723;Parent=HG00140_ch_G0000723;transcript_name=HG00140_ch_T0001881;gene_name=OFD1P1Y;ID=HG00140_ch_T0001881;Name=OFD1P1Y
HG00140_chrY_random0000086	CAT	exon	165155	165254	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG00140_ch_T0001881;gene_id=HG00140_ch_G0000723;Parent=HG00140_ch_T0001881;transcript_name=HG00140_ch_T0001881;gene_name=OFD1P1Y;ID=exon:HG00140_ch_T0001881:0;Name=OFD1P1Y;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	165255	166474	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG00140_ch_T0001881;gene_id=HG00140_ch_G0000723;Parent=HG00140_ch_T0001881;transcript_name=HG00140_ch_T0001881;gene_name=OFD1P1Y;ID=intron:HG00140_ch_T0001881:0;Name=OFD1P1Y;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	166475	166675	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG00140_ch_T0001881;gene_id=HG00140_ch_G0000723;Parent=HG00140_ch_T0001881;transcript_name=HG00140_ch_T0001881;gene_name=OFD1P1Y;ID=exon:HG00140_ch_T0001881:1;Name=OFD1P1Y;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	166676	168870	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG00140_ch_T0001881;gene_id=HG00140_ch_G0000723;Parent=HG00140_ch_T0001881;transcript_name=HG00140_ch_T0001881;gene_name=OFD1P1Y;ID=intron:HG00140_ch_T0001881:1;Name=OFD1P1Y;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	168871	168938	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG00140_ch_T0001881;gene_id=HG00140_ch_G0000723;Parent=HG00140_ch_T0001881;transcript_name=HG00140_ch_T0001881;gene_name=OFD1P1Y;ID=exon:HG00140_ch_T0001881:2;Name=OFD1P1Y;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	168939	169023	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG00140_ch_T0001881;gene_id=HG00140_ch_G0000723;Parent=HG00140_ch_T0001881;transcript_name=HG00140_ch_T0001881;gene_name=OFD1P1Y;ID=intron:HG00140_ch_T0001881:2;Name=OFD1P1Y;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	169024	169054	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG00140_ch_T0001881;gene_id=HG00140_ch_G0000723;Parent=HG00140_ch_T0001881;transcript_name=HG00140_ch_T0001881;gene_name=OFD1P1Y;ID=exon:HG00140_ch_T0001881:3;Name=OFD1P1Y;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	169055	170577	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG00140_ch_T0001881;gene_id=HG00140_ch_G0000723;Parent=HG00140_ch_T0001881;transcript_name=HG00140_ch_T0001881;gene_name=OFD1P1Y;ID=intron:HG00140_ch_T0001881:3;Name=OFD1P1Y;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	170578	170714	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG00140_ch_T0001881;gene_id=HG00140_ch_G0000723;Parent=HG00140_ch_T0001881;transcript_name=HG00140_ch_T0001881;gene_name=OFD1P1Y;ID=exon:HG00140_ch_T0001881:4;Name=OFD1P1Y;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	170715	171038	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG00140_ch_T0001881;gene_id=HG00140_ch_G0000723;Parent=HG00140_ch_T0001881;transcript_name=HG00140_ch_T0001881;gene_name=OFD1P1Y;ID=intron:HG00140_ch_T0001881:4;Name=OFD1P1Y;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	171039	171185	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG00140_ch_T0001881;gene_id=HG00140_ch_G0000723;Parent=HG00140_ch_T0001881;transcript_name=HG00140_ch_T0001881;gene_name=OFD1P1Y;ID=exon:HG00140_ch_T0001881:5;Name=OFD1P1Y;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	171186	174274	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG00140_ch_T0001881;gene_id=HG00140_ch_G0000723;Parent=HG00140_ch_T0001881;transcript_name=HG00140_ch_T0001881;gene_name=OFD1P1Y;ID=intron:HG00140_ch_T0001881:5;Name=OFD1P1Y;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	174275	174380	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG00140_ch_T0001881;gene_id=HG00140_ch_G0000723;Parent=HG00140_ch_T0001881;transcript_name=HG00140_ch_T0001881;gene_name=OFD1P1Y;ID=exon:HG00140_ch_T0001881:6;Name=OFD1P1Y;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	174381	175683	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG00140_ch_T0001881;gene_id=HG00140_ch_G0000723;Parent=HG00140_ch_T0001881;transcript_name=HG00140_ch_T0001881;gene_name=OFD1P1Y;ID=intron:HG00140_ch_T0001881:6;Name=OFD1P1Y;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	175684	175803	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG00140_ch_T0001881;gene_id=HG00140_ch_G0000723;Parent=HG00140_ch_T0001881;transcript_name=HG00140_ch_T0001881;gene_name=OFD1P1Y;ID=exon:HG00140_ch_T0001881:7;Name=OFD1P1Y;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	175804	177640	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG00140_ch_T0001881;gene_id=HG00140_ch_G0000723;Parent=HG00140_ch_T0001881;transcript_name=HG00140_ch_T0001881;gene_name=OFD1P1Y;ID=intron:HG00140_ch_T0001881:7;Name=OFD1P1Y;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	177641	177714	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG00140_ch_T0001881;gene_id=HG00140_ch_G0000723;Parent=HG00140_ch_T0001881;transcript_name=HG00140_ch_T0001881;gene_name=OFD1P1Y;ID=exon:HG00140_ch_T0001881:8;Name=OFD1P1Y;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	177715	178818	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG00140_ch_T0001881;gene_id=HG00140_ch_G0000723;Parent=HG00140_ch_T0001881;transcript_name=HG00140_ch_T0001881;gene_name=OFD1P1Y;ID=intron:HG00140_ch_T0001881:8;Name=OFD1P1Y;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	178819	178910	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG00140_ch_T0001881;gene_id=HG00140_ch_G0000723;Parent=HG00140_ch_T0001881;transcript_name=HG00140_ch_T0001881;gene_name=OFD1P1Y;ID=exon:HG00140_ch_T0001881:9;Name=OFD1P1Y;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	178911	180530	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG00140_ch_T0001881;gene_id=HG00140_ch_G0000723;Parent=HG00140_ch_T0001881;transcript_name=HG00140_ch_T0001881;gene_name=OFD1P1Y;ID=intron:HG00140_ch_T0001881:9;Name=OFD1P1Y;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	180531	180679	.	+	.	source_transcript=ENST00000411756.1;source_transcript_name=OFD1P1Y-201;source_gene=ENSG00000226011.1;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226011.1;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000411756.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000411756.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P1Y;transcript_id=HG00140_ch_T0001881;gene_id=HG00140_ch_G0000723;Parent=HG00140_ch_T0001881;transcript_name=HG00140_ch_T0001881;gene_name=OFD1P1Y;ID=exon:HG00140_ch_T0001881:10;Name=OFD1P1Y;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	gene	173785	180677	.	+	.	source_gene_common_name=ENSG00000300757;source_gene=ENSG00000300757.1;gene_id=HG00140_ch_G0000724;gene_biotype=lncRNA;gene_name=ENSG00000300757;gene_sources=liftoff;ID=HG00140_ch_G0000724;Name=ENSG00000300757
HG00140_chrY_random0000086	CAT	transcript	173785	175879	1000	+	.	source_transcript=ENST00000773847.1;source_transcript_name=ENST00000773847;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773847.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773847.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00140_ch_T0001882;gene_id=HG00140_ch_G0000724;Parent=HG00140_ch_G0000724;transcript_name=HG00140_ch_T0001882;gene_name=ENSG00000300757;ID=HG00140_ch_T0001882;Name=ENSG00000300757
HG00140_chrY_random0000086	CAT	exon	173785	173868	.	+	.	source_transcript=ENST00000773847.1;source_transcript_name=ENST00000773847;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773847.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773847.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00140_ch_T0001882;gene_id=HG00140_ch_G0000724;Parent=HG00140_ch_T0001882;transcript_name=HG00140_ch_T0001882;gene_name=ENSG00000300757;ID=exon:HG00140_ch_T0001882:0;Name=ENSG00000300757;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	173869	173971	.	+	.	source_transcript=ENST00000773847.1;source_transcript_name=ENST00000773847;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773847.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773847.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00140_ch_T0001882;gene_id=HG00140_ch_G0000724;Parent=HG00140_ch_T0001882;transcript_name=HG00140_ch_T0001882;gene_name=ENSG00000300757;ID=intron:HG00140_ch_T0001882:0;Name=ENSG00000300757;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	173972	174112	.	+	.	source_transcript=ENST00000773847.1;source_transcript_name=ENST00000773847;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773847.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773847.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00140_ch_T0001882;gene_id=HG00140_ch_G0000724;Parent=HG00140_ch_T0001882;transcript_name=HG00140_ch_T0001882;gene_name=ENSG00000300757;ID=exon:HG00140_ch_T0001882:1;Name=ENSG00000300757;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	174113	175684	.	+	.	source_transcript=ENST00000773847.1;source_transcript_name=ENST00000773847;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773847.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773847.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00140_ch_T0001882;gene_id=HG00140_ch_G0000724;Parent=HG00140_ch_T0001882;transcript_name=HG00140_ch_T0001882;gene_name=ENSG00000300757;ID=intron:HG00140_ch_T0001882:1;Name=ENSG00000300757;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	175685	175879	.	+	.	source_transcript=ENST00000773847.1;source_transcript_name=ENST00000773847;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773847.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773847.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00140_ch_T0001882;gene_id=HG00140_ch_G0000724;Parent=HG00140_ch_T0001882;transcript_name=HG00140_ch_T0001882;gene_name=ENSG00000300757;ID=exon:HG00140_ch_T0001882:2;Name=ENSG00000300757;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	transcript	173993	175876	1000	+	.	source_transcript=ENST00000773848.1;source_transcript_name=ENST00000773848;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773848.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773848.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00140_ch_T0001883;gene_id=HG00140_ch_G0000724;Parent=HG00140_ch_G0000724;transcript_name=HG00140_ch_T0001883;gene_name=ENSG00000300757;ID=HG00140_ch_T0001883;Name=ENSG00000300757
HG00140_chrY_random0000086	CAT	exon	173993	174112	.	+	.	source_transcript=ENST00000773848.1;source_transcript_name=ENST00000773848;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773848.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773848.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00140_ch_T0001883;gene_id=HG00140_ch_G0000724;Parent=HG00140_ch_T0001883;transcript_name=HG00140_ch_T0001883;gene_name=ENSG00000300757;ID=exon:HG00140_ch_T0001883:0;Name=ENSG00000300757;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	174113	175684	.	+	.	source_transcript=ENST00000773848.1;source_transcript_name=ENST00000773848;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773848.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773848.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00140_ch_T0001883;gene_id=HG00140_ch_G0000724;Parent=HG00140_ch_T0001883;transcript_name=HG00140_ch_T0001883;gene_name=ENSG00000300757;ID=intron:HG00140_ch_T0001883:0;Name=ENSG00000300757;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	175685	175876	.	+	.	source_transcript=ENST00000773848.1;source_transcript_name=ENST00000773848;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773848.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773848.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00140_ch_T0001883;gene_id=HG00140_ch_G0000724;Parent=HG00140_ch_T0001883;transcript_name=HG00140_ch_T0001883;gene_name=ENSG00000300757;ID=exon:HG00140_ch_T0001883:1;Name=ENSG00000300757;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	transcript	175295	180677	1000	+	.	source_transcript=ENST00000773845.1;source_transcript_name=ENST00000773845;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773845.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00140_ch_T0001884;gene_id=HG00140_ch_G0000724;Parent=HG00140_ch_G0000724;transcript_name=HG00140_ch_T0001884;gene_name=ENSG00000300757;ID=HG00140_ch_T0001884;Name=ENSG00000300757
HG00140_chrY_random0000086	CAT	exon	175295	175412	.	+	.	source_transcript=ENST00000773845.1;source_transcript_name=ENST00000773845;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00140_ch_T0001884;gene_id=HG00140_ch_G0000724;Parent=HG00140_ch_T0001884;transcript_name=HG00140_ch_T0001884;gene_name=ENSG00000300757;ID=exon:HG00140_ch_T0001884:0;Name=ENSG00000300757;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	175413	175684	.	+	.	source_transcript=ENST00000773845.1;source_transcript_name=ENST00000773845;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00140_ch_T0001884;gene_id=HG00140_ch_G0000724;Parent=HG00140_ch_T0001884;transcript_name=HG00140_ch_T0001884;gene_name=ENSG00000300757;ID=intron:HG00140_ch_T0001884:0;Name=ENSG00000300757;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	175685	175828	.	+	.	source_transcript=ENST00000773845.1;source_transcript_name=ENST00000773845;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00140_ch_T0001884;gene_id=HG00140_ch_G0000724;Parent=HG00140_ch_T0001884;transcript_name=HG00140_ch_T0001884;gene_name=ENSG00000300757;ID=exon:HG00140_ch_T0001884:1;Name=ENSG00000300757;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	175829	177640	.	+	.	source_transcript=ENST00000773845.1;source_transcript_name=ENST00000773845;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00140_ch_T0001884;gene_id=HG00140_ch_G0000724;Parent=HG00140_ch_T0001884;transcript_name=HG00140_ch_T0001884;gene_name=ENSG00000300757;ID=intron:HG00140_ch_T0001884:1;Name=ENSG00000300757;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	177641	177714	.	+	.	source_transcript=ENST00000773845.1;source_transcript_name=ENST00000773845;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00140_ch_T0001884;gene_id=HG00140_ch_G0000724;Parent=HG00140_ch_T0001884;transcript_name=HG00140_ch_T0001884;gene_name=ENSG00000300757;ID=exon:HG00140_ch_T0001884:2;Name=ENSG00000300757;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	177715	180530	.	+	.	source_transcript=ENST00000773845.1;source_transcript_name=ENST00000773845;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00140_ch_T0001884;gene_id=HG00140_ch_G0000724;Parent=HG00140_ch_T0001884;transcript_name=HG00140_ch_T0001884;gene_name=ENSG00000300757;ID=intron:HG00140_ch_T0001884:2;Name=ENSG00000300757;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	180531	180677	.	+	.	source_transcript=ENST00000773845.1;source_transcript_name=ENST00000773845;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773845.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773845.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00140_ch_T0001884;gene_id=HG00140_ch_G0000724;Parent=HG00140_ch_T0001884;transcript_name=HG00140_ch_T0001884;gene_name=ENSG00000300757;ID=exon:HG00140_ch_T0001884:3;Name=ENSG00000300757;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	transcript	175300	180570	1000	+	.	source_transcript=ENST00000773846.1;source_transcript_name=ENST00000773846;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773846.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773846.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00140_ch_T0001885;gene_id=HG00140_ch_G0000724;Parent=HG00140_ch_G0000724;transcript_name=HG00140_ch_T0001885;gene_name=ENSG00000300757;ID=HG00140_ch_T0001885;Name=ENSG00000300757
HG00140_chrY_random0000086	CAT	exon	175300	175412	.	+	.	source_transcript=ENST00000773846.1;source_transcript_name=ENST00000773846;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773846.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773846.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00140_ch_T0001885;gene_id=HG00140_ch_G0000724;Parent=HG00140_ch_T0001885;transcript_name=HG00140_ch_T0001885;gene_name=ENSG00000300757;ID=exon:HG00140_ch_T0001885:0;Name=ENSG00000300757;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	175413	175684	.	+	.	source_transcript=ENST00000773846.1;source_transcript_name=ENST00000773846;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773846.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773846.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00140_ch_T0001885;gene_id=HG00140_ch_G0000724;Parent=HG00140_ch_T0001885;transcript_name=HG00140_ch_T0001885;gene_name=ENSG00000300757;ID=intron:HG00140_ch_T0001885:0;Name=ENSG00000300757;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	175685	175803	.	+	.	source_transcript=ENST00000773846.1;source_transcript_name=ENST00000773846;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773846.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773846.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00140_ch_T0001885;gene_id=HG00140_ch_G0000724;Parent=HG00140_ch_T0001885;transcript_name=HG00140_ch_T0001885;gene_name=ENSG00000300757;ID=exon:HG00140_ch_T0001885:1;Name=ENSG00000300757;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	175804	177197	.	+	.	source_transcript=ENST00000773846.1;source_transcript_name=ENST00000773846;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773846.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773846.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00140_ch_T0001885;gene_id=HG00140_ch_G0000724;Parent=HG00140_ch_T0001885;transcript_name=HG00140_ch_T0001885;gene_name=ENSG00000300757;ID=intron:HG00140_ch_T0001885:1;Name=ENSG00000300757;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	177198	177273	.	+	.	source_transcript=ENST00000773846.1;source_transcript_name=ENST00000773846;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773846.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773846.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00140_ch_T0001885;gene_id=HG00140_ch_G0000724;Parent=HG00140_ch_T0001885;transcript_name=HG00140_ch_T0001885;gene_name=ENSG00000300757;ID=exon:HG00140_ch_T0001885:2;Name=ENSG00000300757;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	177274	177640	.	+	.	source_transcript=ENST00000773846.1;source_transcript_name=ENST00000773846;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773846.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773846.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00140_ch_T0001885;gene_id=HG00140_ch_G0000724;Parent=HG00140_ch_T0001885;transcript_name=HG00140_ch_T0001885;gene_name=ENSG00000300757;ID=intron:HG00140_ch_T0001885:2;Name=ENSG00000300757;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	177641	177714	.	+	.	source_transcript=ENST00000773846.1;source_transcript_name=ENST00000773846;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773846.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773846.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00140_ch_T0001885;gene_id=HG00140_ch_G0000724;Parent=HG00140_ch_T0001885;transcript_name=HG00140_ch_T0001885;gene_name=ENSG00000300757;ID=exon:HG00140_ch_T0001885:3;Name=ENSG00000300757;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	177715	180530	.	+	.	source_transcript=ENST00000773846.1;source_transcript_name=ENST00000773846;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773846.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773846.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00140_ch_T0001885;gene_id=HG00140_ch_G0000724;Parent=HG00140_ch_T0001885;transcript_name=HG00140_ch_T0001885;gene_name=ENSG00000300757;ID=intron:HG00140_ch_T0001885:3;Name=ENSG00000300757;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	180531	180570	.	+	.	source_transcript=ENST00000773846.1;source_transcript_name=ENST00000773846;source_gene=ENSG00000300757.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000300757.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000773846.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000773846.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000300757;transcript_id=HG00140_ch_T0001885;gene_id=HG00140_ch_G0000724;Parent=HG00140_ch_T0001885;transcript_name=HG00140_ch_T0001885;gene_name=ENSG00000300757;ID=exon:HG00140_ch_T0001885:4;Name=ENSG00000300757;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	gene	192564	192891	.	-	.	source_gene_common_name=ELOCP6;source_gene=ENSG00000225740.1;alternative_source_transcripts=ENST00000429066.1;gene_id=HG00140_ch_G0000725;gene_biotype=processed_pseudogene;gene_name=ELOCP6;gene_sources=liftoff;ID=HG00140_ch_G0000725;Name=ELOCP6
HG00140_chrY_random0000086	CAT	transcript	192564	192891	1000	-	.	source_transcript=ENST00000429066.1;source_transcript_name=ELOCP6-201;source_gene=ENSG00000225740.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225740.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000429066.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429066.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP6;alternative_source_transcripts=ENST00000429066.1;transcript_id=HG00140_ch_T0001886;gene_id=HG00140_ch_G0000725;Parent=HG00140_ch_G0000725;transcript_name=HG00140_ch_T0001886;gene_name=ELOCP6;ID=HG00140_ch_T0001886;Name=ELOCP6
HG00140_chrY_random0000086	CAT	exon	192564	192891	.	-	.	source_transcript=ENST00000429066.1;source_transcript_name=ELOCP6-201;source_gene=ENSG00000225740.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000225740.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000429066.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429066.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP6;alternative_source_transcripts=ENST00000429066.1;transcript_id=HG00140_ch_T0001886;gene_id=HG00140_ch_G0000725;Parent=HG00140_ch_T0001886;transcript_name=HG00140_ch_T0001886;gene_name=ELOCP6;ID=exon:HG00140_ch_T0001886:0;Name=ELOCP6;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	gene	233622	235582	.	-	.	source_gene_common_name=CDY2B;source_gene=ENSG00000129873.8;alternative_source_transcripts=ENST00000382867.4;gene_id=HG00140_ch_G0000726;gene_biotype=protein_coding;gene_name=CDY2B;gene_sources=liftoff;ID=HG00140_ch_G0000726;Name=CDY2B
HG00140_chrY_random0000086	CAT	transcript	233622	235582	100	-	.	source_transcript=ENST00000382867.4;source_transcript_name=CDY2B-201;source_gene=ENSG00000129873.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129873.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382867.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382867.4;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=ENST00000382867.4;transcript_id=HG00140_ch_T0001887;gene_id=HG00140_ch_G0000726;Parent=HG00140_ch_G0000726;transcript_name=HG00140_ch_T0001887;gene_name=CDY2B;ID=HG00140_ch_T0001887;Name=CDY2B
HG00140_chrY_random0000086	CAT	exon	233622	235582	.	-	.	source_transcript=ENST00000382867.4;source_transcript_name=CDY2B-201;source_gene=ENSG00000129873.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129873.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382867.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382867.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=ENST00000382867.4;transcript_id=HG00140_ch_T0001887;gene_id=HG00140_ch_G0000726;Parent=HG00140_ch_T0001887;transcript_name=HG00140_ch_T0001887;gene_name=CDY2B;ID=exon:HG00140_ch_T0001887:0;Name=CDY2B;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	CDS	233629	235254	.	-	0	source_transcript=ENST00000382867.4;source_transcript_name=CDY2B-201;source_gene=ENSG00000129873.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129873.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382867.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382867.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=ENST00000382867.4;transcript_id=HG00140_ch_T0001887;gene_id=HG00140_ch_G0000726;Parent=HG00140_ch_T0001887;transcript_name=HG00140_ch_T0001887;gene_name=CDY2B;ID=CDS:HG00140_ch_T0001887:0;Name=CDY2B;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	stop_codon	233629	233631	.	-	0	source_transcript=ENST00000382867.4;source_transcript_name=CDY2B-201;source_gene=ENSG00000129873.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129873.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382867.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382867.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=ENST00000382867.4;transcript_id=HG00140_ch_T0001887;gene_id=HG00140_ch_G0000726;Parent=HG00140_ch_T0001887;transcript_name=HG00140_ch_T0001887;gene_name=CDY2B;ID=stop_codon:HG00140_ch_T0001887;Name=CDY2B;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	start_codon	235252	235254	.	-	0	source_transcript=ENST00000382867.4;source_transcript_name=CDY2B-201;source_gene=ENSG00000129873.8;source_gene_biotype=protein_coding;original_gene_id=ENSG00000129873.8;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000382867.4;alignment_mode=liftoff;normalized_transcript_id=ENST00000382867.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=ENST00000382867.4;transcript_id=HG00140_ch_T0001887;gene_id=HG00140_ch_G0000726;Parent=HG00140_ch_T0001887;transcript_name=HG00140_ch_T0001887;gene_name=CDY2B;ID=start_codon:HG00140_ch_T0001887;Name=CDY2B;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	gene	237461	239067	.	-	.	source_gene_common_name=CDY6P;source_gene=ENSG00000229138.1;alternative_source_transcripts=ENST00000413320.1;gene_id=HG00140_ch_G0000727;gene_biotype=unprocessed_pseudogene;gene_name=CDY6P;gene_sources=liftoff;ID=HG00140_ch_G0000727;Name=CDY6P
HG00140_chrY_random0000086	CAT	transcript	237461	239067	1000	-	.	source_transcript=ENST00000413320.1;source_transcript_name=CDY6P-201;source_gene=ENSG00000229138.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229138.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413320.1;transcript_score=299.921;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY6P;alternative_source_transcripts=ENST00000413320.1;transcript_id=HG00140_ch_T0001888;gene_id=HG00140_ch_G0000727;Parent=HG00140_ch_G0000727;transcript_name=HG00140_ch_T0001888;gene_name=CDY6P;ID=HG00140_ch_T0001888;Name=CDY6P
HG00140_chrY_random0000086	CAT	exon	237461	238660	.	-	.	source_transcript=ENST00000413320.1;source_transcript_name=CDY6P-201;source_gene=ENSG00000229138.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229138.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413320.1;transcript_score=299.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY6P;alternative_source_transcripts=ENST00000413320.1;transcript_id=HG00140_ch_T0001888;gene_id=HG00140_ch_G0000727;Parent=HG00140_ch_T0001888;transcript_name=HG00140_ch_T0001888;gene_name=CDY6P;ID=exon:HG00140_ch_T0001888:0;Name=CDY6P;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	238661	239001	.	-	.	source_transcript=ENST00000413320.1;source_transcript_name=CDY6P-201;source_gene=ENSG00000229138.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229138.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413320.1;transcript_score=299.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY6P;alternative_source_transcripts=ENST00000413320.1;transcript_id=HG00140_ch_T0001888;gene_id=HG00140_ch_G0000727;Parent=HG00140_ch_T0001888;transcript_name=HG00140_ch_T0001888;gene_name=CDY6P;ID=intron:HG00140_ch_T0001888:0;Name=CDY6P;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	239002	239067	.	-	.	source_transcript=ENST00000413320.1;source_transcript_name=CDY6P-201;source_gene=ENSG00000229138.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000229138.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413320.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413320.1;transcript_score=299.921;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY6P;alternative_source_transcripts=ENST00000413320.1;transcript_id=HG00140_ch_T0001888;gene_id=HG00140_ch_G0000727;Parent=HG00140_ch_T0001888;transcript_name=HG00140_ch_T0001888;gene_name=CDY6P;ID=exon:HG00140_ch_T0001888:1;Name=CDY6P;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	gene	264116	266164	.	+	.	source_gene_common_name=USP9YP32;source_gene=ENSG00000237616.1;alternative_source_transcripts=ENST00000436723.1;gene_id=HG00140_ch_G0000728;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP32;gene_sources=liftoff;ID=HG00140_ch_G0000728;Name=USP9YP32
HG00140_chrY_random0000086	CAT	transcript	264116	266164	1000	+	.	source_transcript=ENST00000452432.1;source_transcript_name=USP9YP32-201;source_gene=ENSG00000237616.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237616.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452432.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP32;alternative_source_transcripts=ENST00000436723.1;transcript_id=HG00140_ch_T0001889;gene_id=HG00140_ch_G0000728;Parent=HG00140_ch_G0000728;transcript_name=HG00140_ch_T0001889;gene_name=USP9YP32;ID=HG00140_ch_T0001889;Name=USP9YP32
HG00140_chrY_random0000086	CAT	exon	264116	264336	.	+	.	source_transcript=ENST00000452432.1;source_transcript_name=USP9YP32-201;source_gene=ENSG00000237616.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237616.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP32;alternative_source_transcripts=ENST00000436723.1;transcript_id=HG00140_ch_T0001889;gene_id=HG00140_ch_G0000728;Parent=HG00140_ch_T0001889;transcript_name=HG00140_ch_T0001889;gene_name=USP9YP32;ID=exon:HG00140_ch_T0001889:0;Name=USP9YP32;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	264337	265955	.	+	.	source_transcript=ENST00000452432.1;source_transcript_name=USP9YP32-201;source_gene=ENSG00000237616.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237616.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP32;alternative_source_transcripts=ENST00000436723.1;transcript_id=HG00140_ch_T0001889;gene_id=HG00140_ch_G0000728;Parent=HG00140_ch_T0001889;transcript_name=HG00140_ch_T0001889;gene_name=USP9YP32;ID=intron:HG00140_ch_T0001889:0;Name=USP9YP32;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	265956	266164	.	+	.	source_transcript=ENST00000452432.1;source_transcript_name=USP9YP32-201;source_gene=ENSG00000237616.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237616.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000452432.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000452432.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP32;alternative_source_transcripts=ENST00000436723.1;transcript_id=HG00140_ch_T0001889;gene_id=HG00140_ch_G0000728;Parent=HG00140_ch_T0001889;transcript_name=HG00140_ch_T0001889;gene_name=USP9YP32;ID=exon:HG00140_ch_T0001889:1;Name=USP9YP32;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	gene	268101	277010	.	-	.	source_gene_common_name=USP9YP34;source_gene=ENSG00000233378.1;gene_id=HG00140_ch_G0000729;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP34;gene_sources=liftoff;ID=HG00140_ch_G0000729;Name=USP9YP34
HG00140_chrY_random0000086	CAT	transcript	268101	277010	1000	-	.	source_transcript=ENST00000453983.1;source_transcript_name=USP9YP34-201;source_gene=ENSG00000233378.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233378.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453983.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP34;transcript_id=HG00140_ch_T0001890;gene_id=HG00140_ch_G0000729;Parent=HG00140_ch_G0000729;transcript_name=HG00140_ch_T0001890;gene_name=USP9YP34;ID=HG00140_ch_T0001890;Name=USP9YP34
HG00140_chrY_random0000086	CAT	exon	268101	268193	.	-	.	source_transcript=ENST00000453983.1;source_transcript_name=USP9YP34-201;source_gene=ENSG00000233378.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233378.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453983.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP34;transcript_id=HG00140_ch_T0001890;gene_id=HG00140_ch_G0000729;Parent=HG00140_ch_T0001890;transcript_name=HG00140_ch_T0001890;gene_name=USP9YP34;ID=exon:HG00140_ch_T0001890:0;Name=USP9YP34;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	268194	270331	.	-	.	source_transcript=ENST00000453983.1;source_transcript_name=USP9YP34-201;source_gene=ENSG00000233378.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233378.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453983.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP34;transcript_id=HG00140_ch_T0001890;gene_id=HG00140_ch_G0000729;Parent=HG00140_ch_T0001890;transcript_name=HG00140_ch_T0001890;gene_name=USP9YP34;ID=intron:HG00140_ch_T0001890:0;Name=USP9YP34;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	270332	270416	.	-	.	source_transcript=ENST00000453983.1;source_transcript_name=USP9YP34-201;source_gene=ENSG00000233378.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233378.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453983.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP34;transcript_id=HG00140_ch_T0001890;gene_id=HG00140_ch_G0000729;Parent=HG00140_ch_T0001890;transcript_name=HG00140_ch_T0001890;gene_name=USP9YP34;ID=exon:HG00140_ch_T0001890:1;Name=USP9YP34;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	270417	272413	.	-	.	source_transcript=ENST00000453983.1;source_transcript_name=USP9YP34-201;source_gene=ENSG00000233378.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233378.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453983.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP34;transcript_id=HG00140_ch_T0001890;gene_id=HG00140_ch_G0000729;Parent=HG00140_ch_T0001890;transcript_name=HG00140_ch_T0001890;gene_name=USP9YP34;ID=intron:HG00140_ch_T0001890:1;Name=USP9YP34;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	272414	272603	.	-	.	source_transcript=ENST00000453983.1;source_transcript_name=USP9YP34-201;source_gene=ENSG00000233378.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233378.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453983.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP34;transcript_id=HG00140_ch_T0001890;gene_id=HG00140_ch_G0000729;Parent=HG00140_ch_T0001890;transcript_name=HG00140_ch_T0001890;gene_name=USP9YP34;ID=exon:HG00140_ch_T0001890:2;Name=USP9YP34;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	272604	274403	.	-	.	source_transcript=ENST00000453983.1;source_transcript_name=USP9YP34-201;source_gene=ENSG00000233378.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233378.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453983.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP34;transcript_id=HG00140_ch_T0001890;gene_id=HG00140_ch_G0000729;Parent=HG00140_ch_T0001890;transcript_name=HG00140_ch_T0001890;gene_name=USP9YP34;ID=intron:HG00140_ch_T0001890:2;Name=USP9YP34;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	274404	274622	.	-	.	source_transcript=ENST00000453983.1;source_transcript_name=USP9YP34-201;source_gene=ENSG00000233378.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233378.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453983.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP34;transcript_id=HG00140_ch_T0001890;gene_id=HG00140_ch_G0000729;Parent=HG00140_ch_T0001890;transcript_name=HG00140_ch_T0001890;gene_name=USP9YP34;ID=exon:HG00140_ch_T0001890:3;Name=USP9YP34;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	274623	276789	.	-	.	source_transcript=ENST00000453983.1;source_transcript_name=USP9YP34-201;source_gene=ENSG00000233378.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233378.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453983.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP34;transcript_id=HG00140_ch_T0001890;gene_id=HG00140_ch_G0000729;Parent=HG00140_ch_T0001890;transcript_name=HG00140_ch_T0001890;gene_name=USP9YP34;ID=intron:HG00140_ch_T0001890:3;Name=USP9YP34;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	276790	277010	.	-	.	source_transcript=ENST00000453983.1;source_transcript_name=USP9YP34-201;source_gene=ENSG00000233378.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000233378.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000453983.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000453983.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP34;transcript_id=HG00140_ch_T0001890;gene_id=HG00140_ch_G0000729;Parent=HG00140_ch_T0001890;transcript_name=HG00140_ch_T0001890;gene_name=USP9YP34;ID=exon:HG00140_ch_T0001890:4;Name=USP9YP34;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	gene	306964	308875	.	+	.	source_gene_common_name=CDY7P;source_gene=ENSG00000237558.1;alternative_source_transcripts=ENST00000429883.1,ENST00000429883.1;gene_id=HG00140_ch_G0000730;gene_biotype=unprocessed_pseudogene;gene_name=CDY7P;gene_sources=liftoff;ID=HG00140_ch_G0000730;Name=CDY7P
HG00140_chrY_random0000086	CAT	transcript	306964	308875	1000	+	.	source_transcript=ENST00000429883.1;source_transcript_name=CDY7P-201;source_gene=ENSG00000237558.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237558.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429883.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429883.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY7P;alternative_source_transcripts=ENST00000429883.1,ENST00000429883.1;transcript_id=HG00140_ch_T0001891;gene_id=HG00140_ch_G0000730;Parent=HG00140_ch_G0000730;transcript_name=HG00140_ch_T0001891;gene_name=CDY7P;ID=HG00140_ch_T0001891;Name=CDY7P
HG00140_chrY_random0000086	CAT	exon	306964	307128	.	+	.	source_transcript=ENST00000429883.1;source_transcript_name=CDY7P-201;source_gene=ENSG00000237558.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237558.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429883.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429883.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY7P;alternative_source_transcripts=ENST00000429883.1,ENST00000429883.1;transcript_id=HG00140_ch_T0001891;gene_id=HG00140_ch_G0000730;Parent=HG00140_ch_T0001891;transcript_name=HG00140_ch_T0001891;gene_name=CDY7P;ID=exon:HG00140_ch_T0001891:0;Name=CDY7P;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	307129	307436	.	+	.	source_transcript=ENST00000429883.1;source_transcript_name=CDY7P-201;source_gene=ENSG00000237558.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237558.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429883.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429883.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY7P;alternative_source_transcripts=ENST00000429883.1,ENST00000429883.1;transcript_id=HG00140_ch_T0001891;gene_id=HG00140_ch_G0000730;Parent=HG00140_ch_T0001891;transcript_name=HG00140_ch_T0001891;gene_name=CDY7P;ID=intron:HG00140_ch_T0001891:0;Name=CDY7P;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	307437	308875	.	+	.	source_transcript=ENST00000429883.1;source_transcript_name=CDY7P-201;source_gene=ENSG00000237558.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000237558.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000429883.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000429883.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY7P;alternative_source_transcripts=ENST00000429883.1,ENST00000429883.1;transcript_id=HG00140_ch_T0001891;gene_id=HG00140_ch_G0000730;Parent=HG00140_ch_T0001891;transcript_name=HG00140_ch_T0001891;gene_name=CDY7P;ID=exon:HG00140_ch_T0001891:1;Name=CDY7P;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	gene	339715	348656	.	+	.	source_gene_common_name=USP9YP6;source_gene=ENSG00000226116.1;alternative_source_transcripts=ENST00000413550.1;gene_id=HG00140_ch_G0000731;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP6;gene_sources=liftoff;ID=HG00140_ch_G0000731;Name=USP9YP6
HG00140_chrY_random0000086	CAT	transcript	339715	348656	1000	+	.	source_transcript=ENST00000413550.1;source_transcript_name=USP9YP6-201;source_gene=ENSG00000226116.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226116.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413550.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP6;alternative_source_transcripts=ENST00000413550.1;transcript_id=HG00140_ch_T0001892;gene_id=HG00140_ch_G0000731;Parent=HG00140_ch_G0000731;transcript_name=HG00140_ch_T0001892;gene_name=USP9YP6;ID=HG00140_ch_T0001892;Name=USP9YP6
HG00140_chrY_random0000086	CAT	exon	339715	339936	.	+	.	source_transcript=ENST00000413550.1;source_transcript_name=USP9YP6-201;source_gene=ENSG00000226116.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226116.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP6;alternative_source_transcripts=ENST00000413550.1;transcript_id=HG00140_ch_T0001892;gene_id=HG00140_ch_G0000731;Parent=HG00140_ch_T0001892;transcript_name=HG00140_ch_T0001892;gene_name=USP9YP6;ID=exon:HG00140_ch_T0001892:0;Name=USP9YP6;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	339937	342099	.	+	.	source_transcript=ENST00000413550.1;source_transcript_name=USP9YP6-201;source_gene=ENSG00000226116.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226116.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP6;alternative_source_transcripts=ENST00000413550.1;transcript_id=HG00140_ch_T0001892;gene_id=HG00140_ch_G0000731;Parent=HG00140_ch_T0001892;transcript_name=HG00140_ch_T0001892;gene_name=USP9YP6;ID=intron:HG00140_ch_T0001892:0;Name=USP9YP6;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	342100	342320	.	+	.	source_transcript=ENST00000413550.1;source_transcript_name=USP9YP6-201;source_gene=ENSG00000226116.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226116.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP6;alternative_source_transcripts=ENST00000413550.1;transcript_id=HG00140_ch_T0001892;gene_id=HG00140_ch_G0000731;Parent=HG00140_ch_T0001892;transcript_name=HG00140_ch_T0001892;gene_name=USP9YP6;ID=exon:HG00140_ch_T0001892:1;Name=USP9YP6;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	342321	344120	.	+	.	source_transcript=ENST00000413550.1;source_transcript_name=USP9YP6-201;source_gene=ENSG00000226116.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226116.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP6;alternative_source_transcripts=ENST00000413550.1;transcript_id=HG00140_ch_T0001892;gene_id=HG00140_ch_G0000731;Parent=HG00140_ch_T0001892;transcript_name=HG00140_ch_T0001892;gene_name=USP9YP6;ID=intron:HG00140_ch_T0001892:1;Name=USP9YP6;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	344121	344321	.	+	.	source_transcript=ENST00000413550.1;source_transcript_name=USP9YP6-201;source_gene=ENSG00000226116.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226116.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP6;alternative_source_transcripts=ENST00000413550.1;transcript_id=HG00140_ch_T0001892;gene_id=HG00140_ch_G0000731;Parent=HG00140_ch_T0001892;transcript_name=HG00140_ch_T0001892;gene_name=USP9YP6;ID=exon:HG00140_ch_T0001892:2;Name=USP9YP6;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	344322	346311	.	+	.	source_transcript=ENST00000413550.1;source_transcript_name=USP9YP6-201;source_gene=ENSG00000226116.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226116.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP6;alternative_source_transcripts=ENST00000413550.1;transcript_id=HG00140_ch_T0001892;gene_id=HG00140_ch_G0000731;Parent=HG00140_ch_T0001892;transcript_name=HG00140_ch_T0001892;gene_name=USP9YP6;ID=intron:HG00140_ch_T0001892:2;Name=USP9YP6;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	346312	346396	.	+	.	source_transcript=ENST00000413550.1;source_transcript_name=USP9YP6-201;source_gene=ENSG00000226116.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226116.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP6;alternative_source_transcripts=ENST00000413550.1;transcript_id=HG00140_ch_T0001892;gene_id=HG00140_ch_G0000731;Parent=HG00140_ch_T0001892;transcript_name=HG00140_ch_T0001892;gene_name=USP9YP6;ID=exon:HG00140_ch_T0001892:3;Name=USP9YP6;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	346397	348531	.	+	.	source_transcript=ENST00000413550.1;source_transcript_name=USP9YP6-201;source_gene=ENSG00000226116.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226116.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP6;alternative_source_transcripts=ENST00000413550.1;transcript_id=HG00140_ch_T0001892;gene_id=HG00140_ch_G0000731;Parent=HG00140_ch_T0001892;transcript_name=HG00140_ch_T0001892;gene_name=USP9YP6;ID=intron:HG00140_ch_T0001892:3;Name=USP9YP6;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	348532	348656	.	+	.	source_transcript=ENST00000413550.1;source_transcript_name=USP9YP6-201;source_gene=ENSG00000226116.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000226116.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000413550.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000413550.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP6;alternative_source_transcripts=ENST00000413550.1;transcript_id=HG00140_ch_T0001892;gene_id=HG00140_ch_G0000731;Parent=HG00140_ch_T0001892;transcript_name=HG00140_ch_T0001892;gene_name=USP9YP6;ID=exon:HG00140_ch_T0001892:4;Name=USP9YP6;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	gene	350553	352605	.	-	.	source_gene_common_name=USP9YP7;source_gene=ENSG00000224485.1;alternative_source_transcripts=ENST00000436723.1,ENST00000452432.1;gene_id=HG00140_ch_G0000732;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP7;gene_sources=liftoff;ID=HG00140_ch_G0000732;Name=USP9YP7
HG00140_chrY_random0000086	CAT	transcript	350553	352605	1000	-	.	source_transcript=ENST00000436723.1;source_transcript_name=USP9YP7-201;source_gene=ENSG00000224485.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224485.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000436723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436723.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP7;alternative_source_transcripts=ENST00000436723.1,ENST00000452432.1;transcript_id=HG00140_ch_T0001893;gene_id=HG00140_ch_G0000732;Parent=HG00140_ch_G0000732;transcript_name=HG00140_ch_T0001893;gene_name=USP9YP7;ID=HG00140_ch_T0001893;Name=USP9YP7
HG00140_chrY_random0000086	CAT	exon	350553	350761	.	-	.	source_transcript=ENST00000436723.1;source_transcript_name=USP9YP7-201;source_gene=ENSG00000224485.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224485.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000436723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436723.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP7;alternative_source_transcripts=ENST00000436723.1,ENST00000452432.1;transcript_id=HG00140_ch_T0001893;gene_id=HG00140_ch_G0000732;Parent=HG00140_ch_T0001893;transcript_name=HG00140_ch_T0001893;gene_name=USP9YP7;ID=exon:HG00140_ch_T0001893:0;Name=USP9YP7;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	350762	352384	.	-	.	source_transcript=ENST00000436723.1;source_transcript_name=USP9YP7-201;source_gene=ENSG00000224485.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224485.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000436723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436723.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP7;alternative_source_transcripts=ENST00000436723.1,ENST00000452432.1;transcript_id=HG00140_ch_T0001893;gene_id=HG00140_ch_G0000732;Parent=HG00140_ch_T0001893;transcript_name=HG00140_ch_T0001893;gene_name=USP9YP7;ID=intron:HG00140_ch_T0001893:0;Name=USP9YP7;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	352385	352605	.	-	.	source_transcript=ENST00000436723.1;source_transcript_name=USP9YP7-201;source_gene=ENSG00000224485.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224485.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000436723.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436723.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP7;alternative_source_transcripts=ENST00000436723.1,ENST00000452432.1;transcript_id=HG00140_ch_T0001893;gene_id=HG00140_ch_G0000732;Parent=HG00140_ch_T0001893;transcript_name=HG00140_ch_T0001893;gene_name=USP9YP7;ID=exon:HG00140_ch_T0001893:1;Name=USP9YP7;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	gene	377649	379255	.	+	.	source_gene_common_name=CDY8P;source_gene=ENSG00000224033.1;alternative_source_transcripts=ENST00000428380.1;gene_id=HG00140_ch_G0000733;gene_biotype=unprocessed_pseudogene;gene_name=CDY8P;gene_sources=liftoff;ID=HG00140_ch_G0000733;Name=CDY8P
HG00140_chrY_random0000086	CAT	transcript	377649	379255	1000	+	.	source_transcript=ENST00000428380.1;source_transcript_name=CDY8P-201;source_gene=ENSG00000224033.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224033.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000428380.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428380.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY8P;alternative_source_transcripts=ENST00000428380.1;transcript_id=HG00140_ch_T0001894;gene_id=HG00140_ch_G0000733;Parent=HG00140_ch_G0000733;transcript_name=HG00140_ch_T0001894;gene_name=CDY8P;ID=HG00140_ch_T0001894;Name=CDY8P
HG00140_chrY_random0000086	CAT	exon	377649	377714	.	+	.	source_transcript=ENST00000428380.1;source_transcript_name=CDY8P-201;source_gene=ENSG00000224033.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224033.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000428380.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428380.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY8P;alternative_source_transcripts=ENST00000428380.1;transcript_id=HG00140_ch_T0001894;gene_id=HG00140_ch_G0000733;Parent=HG00140_ch_T0001894;transcript_name=HG00140_ch_T0001894;gene_name=CDY8P;ID=exon:HG00140_ch_T0001894:0;Name=CDY8P;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	377715	378042	.	+	.	source_transcript=ENST00000428380.1;source_transcript_name=CDY8P-201;source_gene=ENSG00000224033.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224033.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000428380.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428380.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY8P;alternative_source_transcripts=ENST00000428380.1;transcript_id=HG00140_ch_T0001894;gene_id=HG00140_ch_G0000733;Parent=HG00140_ch_T0001894;transcript_name=HG00140_ch_T0001894;gene_name=CDY8P;ID=intron:HG00140_ch_T0001894:0;Name=CDY8P;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	378043	379255	.	+	.	source_transcript=ENST00000428380.1;source_transcript_name=CDY8P-201;source_gene=ENSG00000224033.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224033.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000428380.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000428380.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY8P;alternative_source_transcripts=ENST00000428380.1;transcript_id=HG00140_ch_T0001894;gene_id=HG00140_ch_G0000733;Parent=HG00140_ch_T0001894;transcript_name=HG00140_ch_T0001894;gene_name=CDY8P;ID=exon:HG00140_ch_T0001894:1;Name=CDY8P;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	gene	381134	383093	.	+	.	source_gene_common_name=CDY2A;source_gene=ENSG00000182415.11;alternative_source_transcripts=ENST00000250838.6;gene_id=HG00140_ch_G0000734;gene_biotype=protein_coding;gene_name=CDY2A;gene_sources=liftoff;ID=HG00140_ch_G0000734;Name=CDY2A
HG00140_chrY_random0000086	CAT	transcript	381134	383093	100	+	.	source_transcript=ENST00000250838.6;source_transcript_name=CDY2A-201;source_gene=ENSG00000182415.11;source_gene_biotype=protein_coding;original_gene_id=ENSG00000182415.11;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250838.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250838.6;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=ENST00000250838.6;transcript_id=HG00140_ch_T0001895;gene_id=HG00140_ch_G0000734;Parent=HG00140_ch_G0000734;transcript_name=HG00140_ch_T0001895;gene_name=CDY2A;ID=HG00140_ch_T0001895;Name=CDY2A
HG00140_chrY_random0000086	CAT	exon	381134	383093	.	+	.	source_transcript=ENST00000250838.6;source_transcript_name=CDY2A-201;source_gene=ENSG00000182415.11;source_gene_biotype=protein_coding;original_gene_id=ENSG00000182415.11;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250838.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250838.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=ENST00000250838.6;transcript_id=HG00140_ch_T0001895;gene_id=HG00140_ch_G0000734;Parent=HG00140_ch_T0001895;transcript_name=HG00140_ch_T0001895;gene_name=CDY2A;ID=exon:HG00140_ch_T0001895:0;Name=CDY2A;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	CDS	381462	383087	.	+	0	source_transcript=ENST00000250838.6;source_transcript_name=CDY2A-201;source_gene=ENSG00000182415.11;source_gene_biotype=protein_coding;original_gene_id=ENSG00000182415.11;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250838.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250838.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=ENST00000250838.6;transcript_id=HG00140_ch_T0001895;gene_id=HG00140_ch_G0000734;Parent=HG00140_ch_T0001895;transcript_name=HG00140_ch_T0001895;gene_name=CDY2A;ID=CDS:HG00140_ch_T0001895:0;Name=CDY2A;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	start_codon	381462	381464	.	+	0	source_transcript=ENST00000250838.6;source_transcript_name=CDY2A-201;source_gene=ENSG00000182415.11;source_gene_biotype=protein_coding;original_gene_id=ENSG00000182415.11;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250838.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250838.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=ENST00000250838.6;transcript_id=HG00140_ch_T0001895;gene_id=HG00140_ch_G0000734;Parent=HG00140_ch_T0001895;transcript_name=HG00140_ch_T0001895;gene_name=CDY2A;ID=start_codon:HG00140_ch_T0001895;Name=CDY2A;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	stop_codon	383085	383087	.	+	0	source_transcript=ENST00000250838.6;source_transcript_name=CDY2A-201;source_gene=ENSG00000182415.11;source_gene_biotype=protein_coding;original_gene_id=ENSG00000182415.11;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=ENST00000250838.6;alignment_mode=liftoff;normalized_transcript_id=ENST00000250838.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=ENST00000250838.6;transcript_id=HG00140_ch_T0001895;gene_id=HG00140_ch_G0000734;Parent=HG00140_ch_T0001895;transcript_name=HG00140_ch_T0001895;gene_name=CDY2A;ID=stop_codon:HG00140_ch_T0001895;Name=CDY2A;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	gene	412111	443486	.	-	.	source_gene_common_name=ENSG00000297434;source_gene=ENSG00000297434.1;gene_id=HG00140_ch_G0000735;gene_biotype=lncRNA;gene_name=ENSG00000297434;gene_sources=liftoff;ID=HG00140_ch_G0000735;Name=ENSG00000297434
HG00140_chrY_random0000086	CAT	transcript	412111	443486	1000	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001896;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_G0000735;transcript_name=HG00140_ch_T0001896;gene_name=ENSG00000297434;ID=HG00140_ch_T0001896;Name=ENSG00000297434
HG00140_chrY_random0000086	CAT	exon	412111	412229	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001896;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001896;transcript_name=HG00140_ch_T0001896;gene_name=ENSG00000297434;ID=exon:HG00140_ch_T0001896:0;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	412230	415690	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001896;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001896;transcript_name=HG00140_ch_T0001896;gene_name=ENSG00000297434;ID=intron:HG00140_ch_T0001896:0;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	415691	415946	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001896;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001896;transcript_name=HG00140_ch_T0001896;gene_name=ENSG00000297434;ID=exon:HG00140_ch_T0001896:1;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	415947	428881	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001896;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001896;transcript_name=HG00140_ch_T0001896;gene_name=ENSG00000297434;ID=intron:HG00140_ch_T0001896:1;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	428882	429094	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001896;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001896;transcript_name=HG00140_ch_T0001896;gene_name=ENSG00000297434;ID=exon:HG00140_ch_T0001896:2;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	429095	434539	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001896;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001896;transcript_name=HG00140_ch_T0001896;gene_name=ENSG00000297434;ID=intron:HG00140_ch_T0001896:2;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	434540	434678	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001896;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001896;transcript_name=HG00140_ch_T0001896;gene_name=ENSG00000297434;ID=exon:HG00140_ch_T0001896:3;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	434679	435989	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001896;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001896;transcript_name=HG00140_ch_T0001896;gene_name=ENSG00000297434;ID=intron:HG00140_ch_T0001896:3;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	435990	436187	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001896;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001896;transcript_name=HG00140_ch_T0001896;gene_name=ENSG00000297434;ID=exon:HG00140_ch_T0001896:4;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	436188	439002	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001896;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001896;transcript_name=HG00140_ch_T0001896;gene_name=ENSG00000297434;ID=intron:HG00140_ch_T0001896:4;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	439003	439076	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001896;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001896;transcript_name=HG00140_ch_T0001896;gene_name=ENSG00000297434;ID=exon:HG00140_ch_T0001896:5;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	439077	440924	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001896;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001896;transcript_name=HG00140_ch_T0001896;gene_name=ENSG00000297434;ID=intron:HG00140_ch_T0001896:5;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	440925	441032	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001896;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001896;transcript_name=HG00140_ch_T0001896;gene_name=ENSG00000297434;ID=exon:HG00140_ch_T0001896:6;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	441033	442604	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001896;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001896;transcript_name=HG00140_ch_T0001896;gene_name=ENSG00000297434;ID=intron:HG00140_ch_T0001896:6;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	442605	442739	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001896;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001896;transcript_name=HG00140_ch_T0001896;gene_name=ENSG00000297434;ID=exon:HG00140_ch_T0001896:7;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	442740	443453	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001896;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001896;transcript_name=HG00140_ch_T0001896;gene_name=ENSG00000297434;ID=intron:HG00140_ch_T0001896:7;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	443454	443486	.	-	.	source_transcript=ENST00000747888.1;source_transcript_name=ENST00000747888;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747888.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747888.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001896;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001896;transcript_name=HG00140_ch_T0001896;gene_name=ENSG00000297434;ID=exon:HG00140_ch_T0001896:8;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	transcript	434616	443378	1000	-	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001898;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_G0000735;transcript_name=HG00140_ch_T0001898;gene_name=ENSG00000297434;ID=HG00140_ch_T0001898;Name=ENSG00000297434
HG00140_chrY_random0000086	CAT	exon	434616	434678	.	-	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001898;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001898;transcript_name=HG00140_ch_T0001898;gene_name=ENSG00000297434;ID=exon:HG00140_ch_T0001898:0;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	434679	435985	.	-	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001898;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001898;transcript_name=HG00140_ch_T0001898;gene_name=ENSG00000297434;ID=intron:HG00140_ch_T0001898:0;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	435986	436187	.	-	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001898;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001898;transcript_name=HG00140_ch_T0001898;gene_name=ENSG00000297434;ID=exon:HG00140_ch_T0001898:1;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	436188	439002	.	-	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001898;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001898;transcript_name=HG00140_ch_T0001898;gene_name=ENSG00000297434;ID=intron:HG00140_ch_T0001898:1;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	439003	439076	.	-	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001898;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001898;transcript_name=HG00140_ch_T0001898;gene_name=ENSG00000297434;ID=exon:HG00140_ch_T0001898:2;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	439077	440924	.	-	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001898;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001898;transcript_name=HG00140_ch_T0001898;gene_name=ENSG00000297434;ID=intron:HG00140_ch_T0001898:2;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	440925	441032	.	-	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001898;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001898;transcript_name=HG00140_ch_T0001898;gene_name=ENSG00000297434;ID=exon:HG00140_ch_T0001898:3;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	441033	442604	.	-	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001898;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001898;transcript_name=HG00140_ch_T0001898;gene_name=ENSG00000297434;ID=intron:HG00140_ch_T0001898:3;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	442605	442739	.	-	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001898;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001898;transcript_name=HG00140_ch_T0001898;gene_name=ENSG00000297434;ID=exon:HG00140_ch_T0001898:4;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	442740	443048	.	-	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001898;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001898;transcript_name=HG00140_ch_T0001898;gene_name=ENSG00000297434;ID=intron:HG00140_ch_T0001898:4;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	443049	443378	.	-	.	source_transcript=ENST00000747889.1;source_transcript_name=ENST00000747889;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747889.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747889.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001898;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001898;transcript_name=HG00140_ch_T0001898;gene_name=ENSG00000297434;ID=exon:HG00140_ch_T0001898:5;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	transcript	434616	441422	1000	-	.	source_transcript=ENST00000747891.1;source_transcript_name=ENST00000747891;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747891.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001899;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_G0000735;transcript_name=HG00140_ch_T0001899;gene_name=ENSG00000297434;ID=HG00140_ch_T0001899;Name=ENSG00000297434
HG00140_chrY_random0000086	CAT	exon	434616	434678	.	-	.	source_transcript=ENST00000747891.1;source_transcript_name=ENST00000747891;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747891.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001899;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001899;transcript_name=HG00140_ch_T0001899;gene_name=ENSG00000297434;ID=exon:HG00140_ch_T0001899:0;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	434679	435985	.	-	.	source_transcript=ENST00000747891.1;source_transcript_name=ENST00000747891;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747891.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001899;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001899;transcript_name=HG00140_ch_T0001899;gene_name=ENSG00000297434;ID=intron:HG00140_ch_T0001899:0;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	435986	436187	.	-	.	source_transcript=ENST00000747891.1;source_transcript_name=ENST00000747891;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747891.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001899;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001899;transcript_name=HG00140_ch_T0001899;gene_name=ENSG00000297434;ID=exon:HG00140_ch_T0001899:1;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	436188	439002	.	-	.	source_transcript=ENST00000747891.1;source_transcript_name=ENST00000747891;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747891.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001899;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001899;transcript_name=HG00140_ch_T0001899;gene_name=ENSG00000297434;ID=intron:HG00140_ch_T0001899:1;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	439003	439076	.	-	.	source_transcript=ENST00000747891.1;source_transcript_name=ENST00000747891;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747891.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001899;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001899;transcript_name=HG00140_ch_T0001899;gene_name=ENSG00000297434;ID=exon:HG00140_ch_T0001899:2;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	439077	440924	.	-	.	source_transcript=ENST00000747891.1;source_transcript_name=ENST00000747891;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747891.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001899;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001899;transcript_name=HG00140_ch_T0001899;gene_name=ENSG00000297434;ID=intron:HG00140_ch_T0001899:2;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	440925	441032	.	-	.	source_transcript=ENST00000747891.1;source_transcript_name=ENST00000747891;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747891.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001899;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001899;transcript_name=HG00140_ch_T0001899;gene_name=ENSG00000297434;ID=exon:HG00140_ch_T0001899:3;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	441033	441304	.	-	.	source_transcript=ENST00000747891.1;source_transcript_name=ENST00000747891;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747891.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001899;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001899;transcript_name=HG00140_ch_T0001899;gene_name=ENSG00000297434;ID=intron:HG00140_ch_T0001899:3;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	441305	441422	.	-	.	source_transcript=ENST00000747891.1;source_transcript_name=ENST00000747891;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747891.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747891.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001899;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001899;transcript_name=HG00140_ch_T0001899;gene_name=ENSG00000297434;ID=exon:HG00140_ch_T0001899:4;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	transcript	434617	442921	1000	-	.	source_transcript=ENST00000747890.1;source_transcript_name=ENST00000747890;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747890.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747890.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001900;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_G0000735;transcript_name=HG00140_ch_T0001900;gene_name=ENSG00000297434;ID=HG00140_ch_T0001900;Name=ENSG00000297434
HG00140_chrY_random0000086	CAT	exon	434617	434678	.	-	.	source_transcript=ENST00000747890.1;source_transcript_name=ENST00000747890;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747890.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747890.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001900;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001900;transcript_name=HG00140_ch_T0001900;gene_name=ENSG00000297434;ID=exon:HG00140_ch_T0001900:0;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	434679	435989	.	-	.	source_transcript=ENST00000747890.1;source_transcript_name=ENST00000747890;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747890.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747890.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001900;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001900;transcript_name=HG00140_ch_T0001900;gene_name=ENSG00000297434;ID=intron:HG00140_ch_T0001900:0;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	435990	436187	.	-	.	source_transcript=ENST00000747890.1;source_transcript_name=ENST00000747890;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747890.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747890.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001900;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001900;transcript_name=HG00140_ch_T0001900;gene_name=ENSG00000297434;ID=exon:HG00140_ch_T0001900:1;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	436188	439002	.	-	.	source_transcript=ENST00000747890.1;source_transcript_name=ENST00000747890;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747890.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747890.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001900;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001900;transcript_name=HG00140_ch_T0001900;gene_name=ENSG00000297434;ID=intron:HG00140_ch_T0001900:1;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	439003	439076	.	-	.	source_transcript=ENST00000747890.1;source_transcript_name=ENST00000747890;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747890.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747890.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001900;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001900;transcript_name=HG00140_ch_T0001900;gene_name=ENSG00000297434;ID=exon:HG00140_ch_T0001900:2;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	439077	440913	.	-	.	source_transcript=ENST00000747890.1;source_transcript_name=ENST00000747890;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747890.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747890.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001900;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001900;transcript_name=HG00140_ch_T0001900;gene_name=ENSG00000297434;ID=intron:HG00140_ch_T0001900:2;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	440914	441032	.	-	.	source_transcript=ENST00000747890.1;source_transcript_name=ENST00000747890;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747890.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747890.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001900;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001900;transcript_name=HG00140_ch_T0001900;gene_name=ENSG00000297434;ID=exon:HG00140_ch_T0001900:3;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	441033	442604	.	-	.	source_transcript=ENST00000747890.1;source_transcript_name=ENST00000747890;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747890.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747890.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001900;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001900;transcript_name=HG00140_ch_T0001900;gene_name=ENSG00000297434;ID=intron:HG00140_ch_T0001900:3;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	442605	442921	.	-	.	source_transcript=ENST00000747890.1;source_transcript_name=ENST00000747890;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747890.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747890.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001900;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001900;transcript_name=HG00140_ch_T0001900;gene_name=ENSG00000297434;ID=exon:HG00140_ch_T0001900:4;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	transcript	434618	441417	1000	-	.	source_transcript=ENST00000747892.1;source_transcript_name=ENST00000747892;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747892.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747892.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001901;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_G0000735;transcript_name=HG00140_ch_T0001901;gene_name=ENSG00000297434;ID=HG00140_ch_T0001901;Name=ENSG00000297434
HG00140_chrY_random0000086	CAT	exon	434618	434678	.	-	.	source_transcript=ENST00000747892.1;source_transcript_name=ENST00000747892;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747892.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747892.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001901;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001901;transcript_name=HG00140_ch_T0001901;gene_name=ENSG00000297434;ID=exon:HG00140_ch_T0001901:0;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	434679	435985	.	-	.	source_transcript=ENST00000747892.1;source_transcript_name=ENST00000747892;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747892.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747892.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001901;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001901;transcript_name=HG00140_ch_T0001901;gene_name=ENSG00000297434;ID=intron:HG00140_ch_T0001901:0;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	435986	436187	.	-	.	source_transcript=ENST00000747892.1;source_transcript_name=ENST00000747892;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747892.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747892.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001901;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001901;transcript_name=HG00140_ch_T0001901;gene_name=ENSG00000297434;ID=exon:HG00140_ch_T0001901:1;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	436188	439002	.	-	.	source_transcript=ENST00000747892.1;source_transcript_name=ENST00000747892;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747892.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747892.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001901;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001901;transcript_name=HG00140_ch_T0001901;gene_name=ENSG00000297434;ID=intron:HG00140_ch_T0001901:1;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	439003	439076	.	-	.	source_transcript=ENST00000747892.1;source_transcript_name=ENST00000747892;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747892.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747892.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001901;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001901;transcript_name=HG00140_ch_T0001901;gene_name=ENSG00000297434;ID=exon:HG00140_ch_T0001901:2;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	439077	440913	.	-	.	source_transcript=ENST00000747892.1;source_transcript_name=ENST00000747892;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747892.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747892.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001901;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001901;transcript_name=HG00140_ch_T0001901;gene_name=ENSG00000297434;ID=intron:HG00140_ch_T0001901:2;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	440914	441032	.	-	.	source_transcript=ENST00000747892.1;source_transcript_name=ENST00000747892;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747892.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747892.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001901;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001901;transcript_name=HG00140_ch_T0001901;gene_name=ENSG00000297434;ID=exon:HG00140_ch_T0001901:3;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	441033	441304	.	-	.	source_transcript=ENST00000747892.1;source_transcript_name=ENST00000747892;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747892.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747892.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001901;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001901;transcript_name=HG00140_ch_T0001901;gene_name=ENSG00000297434;ID=intron:HG00140_ch_T0001901:3;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	441305	441417	.	-	.	source_transcript=ENST00000747892.1;source_transcript_name=ENST00000747892;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747892.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747892.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001901;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001901;transcript_name=HG00140_ch_T0001901;gene_name=ENSG00000297434;ID=exon:HG00140_ch_T0001901:4;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	transcript	434619	441417	1000	-	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001902;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_G0000735;transcript_name=HG00140_ch_T0001902;gene_name=ENSG00000297434;ID=HG00140_ch_T0001902;Name=ENSG00000297434
HG00140_chrY_random0000086	CAT	exon	434619	434678	.	-	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001902;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001902;transcript_name=HG00140_ch_T0001902;gene_name=ENSG00000297434;ID=exon:HG00140_ch_T0001902:0;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	434679	435985	.	-	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001902;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001902;transcript_name=HG00140_ch_T0001902;gene_name=ENSG00000297434;ID=intron:HG00140_ch_T0001902:0;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	435986	436187	.	-	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001902;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001902;transcript_name=HG00140_ch_T0001902;gene_name=ENSG00000297434;ID=exon:HG00140_ch_T0001902:1;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	436188	437830	.	-	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001902;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001902;transcript_name=HG00140_ch_T0001902;gene_name=ENSG00000297434;ID=intron:HG00140_ch_T0001902:1;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	437831	437898	.	-	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001902;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001902;transcript_name=HG00140_ch_T0001902;gene_name=ENSG00000297434;ID=exon:HG00140_ch_T0001902:2;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	437899	439002	.	-	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001902;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001902;transcript_name=HG00140_ch_T0001902;gene_name=ENSG00000297434;ID=intron:HG00140_ch_T0001902:2;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	439003	439076	.	-	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001902;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001902;transcript_name=HG00140_ch_T0001902;gene_name=ENSG00000297434;ID=exon:HG00140_ch_T0001902:3;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	439077	440924	.	-	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001902;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001902;transcript_name=HG00140_ch_T0001902;gene_name=ENSG00000297434;ID=intron:HG00140_ch_T0001902:3;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	440925	441032	.	-	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001902;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001902;transcript_name=HG00140_ch_T0001902;gene_name=ENSG00000297434;ID=exon:HG00140_ch_T0001902:4;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	441033	441304	.	-	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001902;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001902;transcript_name=HG00140_ch_T0001902;gene_name=ENSG00000297434;ID=intron:HG00140_ch_T0001902:4;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	441305	441417	.	-	.	source_transcript=ENST00000747893.1;source_transcript_name=ENST00000747893;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747893.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747893.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001902;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001902;transcript_name=HG00140_ch_T0001902;gene_name=ENSG00000297434;ID=exon:HG00140_ch_T0001902:5;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	transcript	440838	442931	1000	-	.	source_transcript=ENST00000747894.1;source_transcript_name=ENST00000747894;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747894.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001904;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_G0000735;transcript_name=HG00140_ch_T0001904;gene_name=ENSG00000297434;ID=HG00140_ch_T0001904;Name=ENSG00000297434
HG00140_chrY_random0000086	CAT	exon	440838	441032	.	-	.	source_transcript=ENST00000747894.1;source_transcript_name=ENST00000747894;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747894.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001904;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001904;transcript_name=HG00140_ch_T0001904;gene_name=ENSG00000297434;ID=exon:HG00140_ch_T0001904:0;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	441033	442604	.	-	.	source_transcript=ENST00000747894.1;source_transcript_name=ENST00000747894;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747894.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001904;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001904;transcript_name=HG00140_ch_T0001904;gene_name=ENSG00000297434;ID=intron:HG00140_ch_T0001904:0;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	442605	442745	.	-	.	source_transcript=ENST00000747894.1;source_transcript_name=ENST00000747894;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747894.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001904;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001904;transcript_name=HG00140_ch_T0001904;gene_name=ENSG00000297434;ID=exon:HG00140_ch_T0001904:1;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	442746	442847	.	-	.	source_transcript=ENST00000747894.1;source_transcript_name=ENST00000747894;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747894.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001904;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001904;transcript_name=HG00140_ch_T0001904;gene_name=ENSG00000297434;ID=intron:HG00140_ch_T0001904:1;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	442848	442931	.	-	.	source_transcript=ENST00000747894.1;source_transcript_name=ENST00000747894;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747894.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001904;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001904;transcript_name=HG00140_ch_T0001904;gene_name=ENSG00000297434;ID=exon:HG00140_ch_T0001904:2;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	transcript	440841	442724	1000	-	.	source_transcript=ENST00000747895.1;source_transcript_name=ENST00000747895;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747895.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747895.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001905;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_G0000735;transcript_name=HG00140_ch_T0001905;gene_name=ENSG00000297434;ID=HG00140_ch_T0001905;Name=ENSG00000297434
HG00140_chrY_random0000086	CAT	exon	440841	441032	.	-	.	source_transcript=ENST00000747895.1;source_transcript_name=ENST00000747895;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747895.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747895.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001905;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001905;transcript_name=HG00140_ch_T0001905;gene_name=ENSG00000297434;ID=exon:HG00140_ch_T0001905:0;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	441033	442604	.	-	.	source_transcript=ENST00000747895.1;source_transcript_name=ENST00000747895;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747895.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747895.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001905;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001905;transcript_name=HG00140_ch_T0001905;gene_name=ENSG00000297434;ID=intron:HG00140_ch_T0001905:0;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	442605	442724	.	-	.	source_transcript=ENST00000747895.1;source_transcript_name=ENST00000747895;source_gene=ENSG00000297434.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000297434.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000747895.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000747895.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000297434;transcript_id=HG00140_ch_T0001905;gene_id=HG00140_ch_G0000735;Parent=HG00140_ch_T0001905;transcript_name=HG00140_ch_T0001905;gene_name=ENSG00000297434;ID=exon:HG00140_ch_T0001905:1;Name=ENSG00000297434;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	gene	423830	424157	.	+	.	source_gene_common_name=ELOCP12;source_gene=ENSG00000230412.1;alternative_source_transcripts=ENST00000429066.1,ENST00000458706.1;gene_id=HG00140_ch_G0000736;gene_biotype=processed_pseudogene;gene_name=ELOCP12;gene_sources=liftoff;ID=HG00140_ch_G0000736;Name=ELOCP12
HG00140_chrY_random0000086	CAT	transcript	423830	424157	1000	+	.	source_transcript=ENST00000458706.1;source_transcript_name=ELOCP12-201;source_gene=ENSG00000230412.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000230412.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000458706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458706.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP12;alternative_source_transcripts=ENST00000429066.1,ENST00000458706.1;transcript_id=HG00140_ch_T0001897;gene_id=HG00140_ch_G0000736;Parent=HG00140_ch_G0000736;transcript_name=HG00140_ch_T0001897;gene_name=ELOCP12;ID=HG00140_ch_T0001897;Name=ELOCP12
HG00140_chrY_random0000086	CAT	exon	423830	424157	.	+	.	source_transcript=ENST00000458706.1;source_transcript_name=ELOCP12-201;source_gene=ENSG00000230412.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000230412.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000458706.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000458706.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP12;alternative_source_transcripts=ENST00000429066.1,ENST00000458706.1;transcript_id=HG00140_ch_T0001897;gene_id=HG00140_ch_G0000736;Parent=HG00140_ch_T0001897;transcript_name=HG00140_ch_T0001897;gene_name=ELOCP12;ID=exon:HG00140_ch_T0001897:0;Name=ELOCP12;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	gene	436039	451559	.	-	.	source_gene_common_name=OFD1P2Y;source_gene=ENSG00000226611.2;gene_id=HG00140_ch_G0000737;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=OFD1P2Y;gene_sources=liftoff;ID=HG00140_ch_G0000737;Name=OFD1P2Y
HG00140_chrY_random0000086	CAT	transcript	436039	451559	1000	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG00140_ch_T0001903;gene_id=HG00140_ch_G0000737;Parent=HG00140_ch_G0000737;transcript_name=HG00140_ch_T0001903;gene_name=OFD1P2Y;ID=HG00140_ch_T0001903;Name=OFD1P2Y
HG00140_chrY_random0000086	CAT	exon	436039	436187	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG00140_ch_T0001903;gene_id=HG00140_ch_G0000737;Parent=HG00140_ch_T0001903;transcript_name=HG00140_ch_T0001903;gene_name=OFD1P2Y;ID=exon:HG00140_ch_T0001903:0;Name=OFD1P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	436188	437830	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG00140_ch_T0001903;gene_id=HG00140_ch_G0000737;Parent=HG00140_ch_T0001903;transcript_name=HG00140_ch_T0001903;gene_name=OFD1P2Y;ID=intron:HG00140_ch_T0001903:0;Name=OFD1P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	437831	437898	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG00140_ch_T0001903;gene_id=HG00140_ch_G0000737;Parent=HG00140_ch_T0001903;transcript_name=HG00140_ch_T0001903;gene_name=OFD1P2Y;ID=exon:HG00140_ch_T0001903:1;Name=OFD1P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	437899	439002	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG00140_ch_T0001903;gene_id=HG00140_ch_G0000737;Parent=HG00140_ch_T0001903;transcript_name=HG00140_ch_T0001903;gene_name=OFD1P2Y;ID=intron:HG00140_ch_T0001903:1;Name=OFD1P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	439003	439076	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG00140_ch_T0001903;gene_id=HG00140_ch_G0000737;Parent=HG00140_ch_T0001903;transcript_name=HG00140_ch_T0001903;gene_name=OFD1P2Y;ID=exon:HG00140_ch_T0001903:2;Name=OFD1P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	439077	440913	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG00140_ch_T0001903;gene_id=HG00140_ch_G0000737;Parent=HG00140_ch_T0001903;transcript_name=HG00140_ch_T0001903;gene_name=OFD1P2Y;ID=intron:HG00140_ch_T0001903:2;Name=OFD1P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	440914	441032	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG00140_ch_T0001903;gene_id=HG00140_ch_G0000737;Parent=HG00140_ch_T0001903;transcript_name=HG00140_ch_T0001903;gene_name=OFD1P2Y;ID=exon:HG00140_ch_T0001903:3;Name=OFD1P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	441033	442336	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG00140_ch_T0001903;gene_id=HG00140_ch_G0000737;Parent=HG00140_ch_T0001903;transcript_name=HG00140_ch_T0001903;gene_name=OFD1P2Y;ID=intron:HG00140_ch_T0001903:3;Name=OFD1P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	442337	442442	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG00140_ch_T0001903;gene_id=HG00140_ch_G0000737;Parent=HG00140_ch_T0001903;transcript_name=HG00140_ch_T0001903;gene_name=OFD1P2Y;ID=exon:HG00140_ch_T0001903:4;Name=OFD1P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	442443	445530	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG00140_ch_T0001903;gene_id=HG00140_ch_G0000737;Parent=HG00140_ch_T0001903;transcript_name=HG00140_ch_T0001903;gene_name=OFD1P2Y;ID=intron:HG00140_ch_T0001903:4;Name=OFD1P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	445531	445677	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG00140_ch_T0001903;gene_id=HG00140_ch_G0000737;Parent=HG00140_ch_T0001903;transcript_name=HG00140_ch_T0001903;gene_name=OFD1P2Y;ID=exon:HG00140_ch_T0001903:5;Name=OFD1P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	445678	446001	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG00140_ch_T0001903;gene_id=HG00140_ch_G0000737;Parent=HG00140_ch_T0001903;transcript_name=HG00140_ch_T0001903;gene_name=OFD1P2Y;ID=intron:HG00140_ch_T0001903:5;Name=OFD1P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	446002	446138	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG00140_ch_T0001903;gene_id=HG00140_ch_G0000737;Parent=HG00140_ch_T0001903;transcript_name=HG00140_ch_T0001903;gene_name=OFD1P2Y;ID=exon:HG00140_ch_T0001903:6;Name=OFD1P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	446139	447661	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG00140_ch_T0001903;gene_id=HG00140_ch_G0000737;Parent=HG00140_ch_T0001903;transcript_name=HG00140_ch_T0001903;gene_name=OFD1P2Y;ID=intron:HG00140_ch_T0001903:6;Name=OFD1P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	447662	447692	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG00140_ch_T0001903;gene_id=HG00140_ch_G0000737;Parent=HG00140_ch_T0001903;transcript_name=HG00140_ch_T0001903;gene_name=OFD1P2Y;ID=exon:HG00140_ch_T0001903:7;Name=OFD1P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	447693	447777	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG00140_ch_T0001903;gene_id=HG00140_ch_G0000737;Parent=HG00140_ch_T0001903;transcript_name=HG00140_ch_T0001903;gene_name=OFD1P2Y;ID=intron:HG00140_ch_T0001903:7;Name=OFD1P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	447778	447845	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG00140_ch_T0001903;gene_id=HG00140_ch_G0000737;Parent=HG00140_ch_T0001903;transcript_name=HG00140_ch_T0001903;gene_name=OFD1P2Y;ID=exon:HG00140_ch_T0001903:8;Name=OFD1P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	447846	450039	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG00140_ch_T0001903;gene_id=HG00140_ch_G0000737;Parent=HG00140_ch_T0001903;transcript_name=HG00140_ch_T0001903;gene_name=OFD1P2Y;ID=intron:HG00140_ch_T0001903:8;Name=OFD1P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	450040	450240	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG00140_ch_T0001903;gene_id=HG00140_ch_G0000737;Parent=HG00140_ch_T0001903;transcript_name=HG00140_ch_T0001903;gene_name=OFD1P2Y;ID=exon:HG00140_ch_T0001903:9;Name=OFD1P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	450241	451461	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG00140_ch_T0001903;gene_id=HG00140_ch_G0000737;Parent=HG00140_ch_T0001903;transcript_name=HG00140_ch_T0001903;gene_name=OFD1P2Y;ID=intron:HG00140_ch_T0001903:9;Name=OFD1P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	451462	451559	.	-	.	source_transcript=ENST00000421895.3;source_transcript_name=OFD1P2Y-201;source_gene=ENSG00000226611.2;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000226611.2;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000421895.3;alignment_mode=liftoff;normalized_transcript_id=ENST00000421895.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=OFD1P2Y;transcript_id=HG00140_ch_T0001903;gene_id=HG00140_ch_G0000737;Parent=HG00140_ch_T0001903;transcript_name=HG00140_ch_T0001903;gene_name=OFD1P2Y;ID=exon:HG00140_ch_T0001903:10;Name=OFD1P2Y;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	gene	460670	463383	.	+	.	source_gene_common_name=TRAPPC2P3;source_gene=ENSG00000224964.1;alternative_source_transcripts=ENST00000443200.1;gene_id=HG00140_ch_G0000738;gene_biotype=unprocessed_pseudogene;gene_name=TRAPPC2P3;gene_sources=liftoff;ID=HG00140_ch_G0000738;Name=TRAPPC2P3
HG00140_chrY_random0000086	CAT	transcript	460670	463383	1000	+	.	source_transcript=ENST00000443200.1;source_transcript_name=TRAPPC2P3-201;source_gene=ENSG00000224964.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224964.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443200.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P3;alternative_source_transcripts=ENST00000443200.1;transcript_id=HG00140_ch_T0001906;gene_id=HG00140_ch_G0000738;Parent=HG00140_ch_G0000738;transcript_name=HG00140_ch_T0001906;gene_name=TRAPPC2P3;ID=HG00140_ch_T0001906;Name=TRAPPC2P3
HG00140_chrY_random0000086	CAT	exon	460670	460762	.	+	.	source_transcript=ENST00000443200.1;source_transcript_name=TRAPPC2P3-201;source_gene=ENSG00000224964.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224964.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P3;alternative_source_transcripts=ENST00000443200.1;transcript_id=HG00140_ch_T0001906;gene_id=HG00140_ch_G0000738;Parent=HG00140_ch_T0001906;transcript_name=HG00140_ch_T0001906;gene_name=TRAPPC2P3;ID=exon:HG00140_ch_T0001906:0;Name=TRAPPC2P3;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	460763	462714	.	+	.	source_transcript=ENST00000443200.1;source_transcript_name=TRAPPC2P3-201;source_gene=ENSG00000224964.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224964.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P3;alternative_source_transcripts=ENST00000443200.1;transcript_id=HG00140_ch_T0001906;gene_id=HG00140_ch_G0000738;Parent=HG00140_ch_T0001906;transcript_name=HG00140_ch_T0001906;gene_name=TRAPPC2P3;ID=intron:HG00140_ch_T0001906:0;Name=TRAPPC2P3;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	462715	462856	.	+	.	source_transcript=ENST00000443200.1;source_transcript_name=TRAPPC2P3-201;source_gene=ENSG00000224964.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224964.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P3;alternative_source_transcripts=ENST00000443200.1;transcript_id=HG00140_ch_T0001906;gene_id=HG00140_ch_G0000738;Parent=HG00140_ch_T0001906;transcript_name=HG00140_ch_T0001906;gene_name=TRAPPC2P3;ID=exon:HG00140_ch_T0001906:1;Name=TRAPPC2P3;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	462857	463297	.	+	.	source_transcript=ENST00000443200.1;source_transcript_name=TRAPPC2P3-201;source_gene=ENSG00000224964.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224964.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P3;alternative_source_transcripts=ENST00000443200.1;transcript_id=HG00140_ch_T0001906;gene_id=HG00140_ch_G0000738;Parent=HG00140_ch_T0001906;transcript_name=HG00140_ch_T0001906;gene_name=TRAPPC2P3;ID=intron:HG00140_ch_T0001906:1;Name=TRAPPC2P3;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	463298	463383	.	+	.	source_transcript=ENST00000443200.1;source_transcript_name=TRAPPC2P3-201;source_gene=ENSG00000224964.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000224964.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000443200.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000443200.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TRAPPC2P3;alternative_source_transcripts=ENST00000443200.1;transcript_id=HG00140_ch_T0001906;gene_id=HG00140_ch_G0000738;Parent=HG00140_ch_T0001906;transcript_name=HG00140_ch_T0001906;gene_name=TRAPPC2P3;ID=exon:HG00140_ch_T0001906:2;Name=TRAPPC2P3;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	gene	471882	473051	.	+	.	source_gene_common_name=USP9YP27;source_gene=ENSG00000235521.1;gene_id=HG00140_ch_G0000739;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP27;gene_sources=liftoff;ID=HG00140_ch_G0000739;Name=USP9YP27
HG00140_chrY_random0000086	CAT	transcript	471882	473051	1000	+	.	source_transcript=ENST00000418455.1;source_transcript_name=USP9YP27-201;source_gene=ENSG00000235521.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235521.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418455.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418455.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP27;transcript_id=HG00140_ch_T0001907;gene_id=HG00140_ch_G0000739;Parent=HG00140_ch_G0000739;transcript_name=HG00140_ch_T0001907;gene_name=USP9YP27;ID=HG00140_ch_T0001907;Name=USP9YP27
HG00140_chrY_random0000086	CAT	exon	471882	472023	.	+	.	source_transcript=ENST00000418455.1;source_transcript_name=USP9YP27-201;source_gene=ENSG00000235521.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235521.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418455.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418455.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP27;transcript_id=HG00140_ch_T0001907;gene_id=HG00140_ch_G0000739;Parent=HG00140_ch_T0001907;transcript_name=HG00140_ch_T0001907;gene_name=USP9YP27;ID=exon:HG00140_ch_T0001907:0;Name=USP9YP27;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	472024	472175	.	+	.	source_transcript=ENST00000418455.1;source_transcript_name=USP9YP27-201;source_gene=ENSG00000235521.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235521.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418455.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418455.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP27;transcript_id=HG00140_ch_T0001907;gene_id=HG00140_ch_G0000739;Parent=HG00140_ch_T0001907;transcript_name=HG00140_ch_T0001907;gene_name=USP9YP27;ID=intron:HG00140_ch_T0001907:0;Name=USP9YP27;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	472176	472204	.	+	.	source_transcript=ENST00000418455.1;source_transcript_name=USP9YP27-201;source_gene=ENSG00000235521.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235521.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418455.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418455.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP27;transcript_id=HG00140_ch_T0001907;gene_id=HG00140_ch_G0000739;Parent=HG00140_ch_T0001907;transcript_name=HG00140_ch_T0001907;gene_name=USP9YP27;ID=exon:HG00140_ch_T0001907:1;Name=USP9YP27;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	472205	472404	.	+	.	source_transcript=ENST00000418455.1;source_transcript_name=USP9YP27-201;source_gene=ENSG00000235521.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235521.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418455.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418455.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP27;transcript_id=HG00140_ch_T0001907;gene_id=HG00140_ch_G0000739;Parent=HG00140_ch_T0001907;transcript_name=HG00140_ch_T0001907;gene_name=USP9YP27;ID=intron:HG00140_ch_T0001907:1;Name=USP9YP27;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	472405	472575	.	+	.	source_transcript=ENST00000418455.1;source_transcript_name=USP9YP27-201;source_gene=ENSG00000235521.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235521.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418455.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418455.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP27;transcript_id=HG00140_ch_T0001907;gene_id=HG00140_ch_G0000739;Parent=HG00140_ch_T0001907;transcript_name=HG00140_ch_T0001907;gene_name=USP9YP27;ID=exon:HG00140_ch_T0001907:2;Name=USP9YP27;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	472576	472955	.	+	.	source_transcript=ENST00000418455.1;source_transcript_name=USP9YP27-201;source_gene=ENSG00000235521.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235521.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418455.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418455.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP27;transcript_id=HG00140_ch_T0001907;gene_id=HG00140_ch_G0000739;Parent=HG00140_ch_T0001907;transcript_name=HG00140_ch_T0001907;gene_name=USP9YP27;ID=intron:HG00140_ch_T0001907:2;Name=USP9YP27;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	472956	473051	.	+	.	source_transcript=ENST00000418455.1;source_transcript_name=USP9YP27-201;source_gene=ENSG00000235521.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000235521.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000418455.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000418455.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP27;transcript_id=HG00140_ch_T0001907;gene_id=HG00140_ch_G0000739;Parent=HG00140_ch_T0001907;transcript_name=HG00140_ch_T0001907;gene_name=USP9YP27;ID=exon:HG00140_ch_T0001907:3;Name=USP9YP27;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	gene	472204	472363	.	+	.	source_gene_common_name=RNU1-128P;source_gene=ENSG00000252513.1;gene_id=HG00140_ch_G0000740;gene_biotype=snRNA;gene_name=RNU1-128P;gene_sources=liftoff;ID=HG00140_ch_G0000740;Name=RNU1-128P
HG00140_chrY_random0000086	CAT	transcript	472204	472363	1000	+	.	source_transcript=ENST00000516704.1;source_transcript_name=RNU1-128P-201;source_gene=ENSG00000252513.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252513.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516704.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-128P;transcript_id=HG00140_ch_T0001908;gene_id=HG00140_ch_G0000740;Parent=HG00140_ch_G0000740;transcript_name=HG00140_ch_T0001908;gene_name=RNU1-128P;ID=HG00140_ch_T0001908;Name=RNU1-128P
HG00140_chrY_random0000086	CAT	exon	472204	472363	.	+	.	source_transcript=ENST00000516704.1;source_transcript_name=RNU1-128P-201;source_gene=ENSG00000252513.1;source_gene_biotype=snRNA;original_gene_id=ENSG00000252513.1;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=ENST00000516704.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000516704.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RNU1-128P;transcript_id=HG00140_ch_T0001908;gene_id=HG00140_ch_G0000740;Parent=HG00140_ch_T0001908;transcript_name=HG00140_ch_T0001908;gene_name=RNU1-128P;ID=exon:HG00140_ch_T0001908:0;Name=RNU1-128P;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	gene	476543	479147	.	-	.	source_gene_common_name=USP9YP16;source_gene=ENSG00000232744.1;alternative_source_transcripts=ENST00000430287.1;gene_id=HG00140_ch_G0000741;gene_biotype=unprocessed_pseudogene;gene_name=USP9YP16;gene_sources=liftoff;ID=HG00140_ch_G0000741;Name=USP9YP16
HG00140_chrY_random0000086	CAT	transcript	476543	479147	1000	-	.	source_transcript=ENST00000430287.1;source_transcript_name=USP9YP16-201;source_gene=ENSG00000232744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430287.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP16;alternative_source_transcripts=ENST00000430287.1;transcript_id=HG00140_ch_T0001909;gene_id=HG00140_ch_G0000741;Parent=HG00140_ch_G0000741;transcript_name=HG00140_ch_T0001909;gene_name=USP9YP16;ID=HG00140_ch_T0001909;Name=USP9YP16
HG00140_chrY_random0000086	CAT	exon	476543	476731	.	-	.	source_transcript=ENST00000430287.1;source_transcript_name=USP9YP16-201;source_gene=ENSG00000232744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430287.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP16;alternative_source_transcripts=ENST00000430287.1;transcript_id=HG00140_ch_T0001909;gene_id=HG00140_ch_G0000741;Parent=HG00140_ch_T0001909;transcript_name=HG00140_ch_T0001909;gene_name=USP9YP16;ID=exon:HG00140_ch_T0001909:0;Name=USP9YP16;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	476732	478356	.	-	.	source_transcript=ENST00000430287.1;source_transcript_name=USP9YP16-201;source_gene=ENSG00000232744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430287.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP16;alternative_source_transcripts=ENST00000430287.1;transcript_id=HG00140_ch_T0001909;gene_id=HG00140_ch_G0000741;Parent=HG00140_ch_T0001909;transcript_name=HG00140_ch_T0001909;gene_name=USP9YP16;ID=intron:HG00140_ch_T0001909:0;Name=USP9YP16;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	478357	478448	.	-	.	source_transcript=ENST00000430287.1;source_transcript_name=USP9YP16-201;source_gene=ENSG00000232744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430287.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP16;alternative_source_transcripts=ENST00000430287.1;transcript_id=HG00140_ch_T0001909;gene_id=HG00140_ch_G0000741;Parent=HG00140_ch_T0001909;transcript_name=HG00140_ch_T0001909;gene_name=USP9YP16;ID=exon:HG00140_ch_T0001909:1;Name=USP9YP16;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	478449	479021	.	-	.	source_transcript=ENST00000430287.1;source_transcript_name=USP9YP16-201;source_gene=ENSG00000232744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430287.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP16;alternative_source_transcripts=ENST00000430287.1;transcript_id=HG00140_ch_T0001909;gene_id=HG00140_ch_G0000741;Parent=HG00140_ch_T0001909;transcript_name=HG00140_ch_T0001909;gene_name=USP9YP16;ID=intron:HG00140_ch_T0001909:1;Name=USP9YP16;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	479022	479147	.	-	.	source_transcript=ENST00000430287.1;source_transcript_name=USP9YP16-201;source_gene=ENSG00000232744.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232744.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000430287.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000430287.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9YP16;alternative_source_transcripts=ENST00000430287.1;transcript_id=HG00140_ch_T0001909;gene_id=HG00140_ch_G0000741;Parent=HG00140_ch_T0001909;transcript_name=HG00140_ch_T0001909;gene_name=USP9YP16;ID=exon:HG00140_ch_T0001909:2;Name=USP9YP16;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	gene	483960	492244	.	+	.	source_gene_common_name=XKRY;source_gene=ENSG00000250868.5;gene_id=HG00140_ch_G0000742;gene_biotype=transcribed_unprocessed_pseudogene;gene_name=XKRY;gene_sources=liftoff;ID=HG00140_ch_G0000742;Name=XKRY
HG00140_chrY_random0000086	CAT	transcript	483960	492244	1000	+	.	source_transcript=ENST00000510392.1;source_transcript_name=XKRY-201;source_gene=ENSG00000250868.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000250868.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000510392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000510392.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY;transcript_id=HG00140_ch_T0001910;gene_id=HG00140_ch_G0000742;Parent=HG00140_ch_G0000742;transcript_name=HG00140_ch_T0001910;gene_name=XKRY;ID=HG00140_ch_T0001910;Name=XKRY
HG00140_chrY_random0000086	CAT	exon	483960	484294	.	+	.	source_transcript=ENST00000510392.1;source_transcript_name=XKRY-201;source_gene=ENSG00000250868.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000250868.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000510392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000510392.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY;transcript_id=HG00140_ch_T0001910;gene_id=HG00140_ch_G0000742;Parent=HG00140_ch_T0001910;transcript_name=HG00140_ch_T0001910;gene_name=XKRY;ID=exon:HG00140_ch_T0001910:0;Name=XKRY;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	484295	491479	.	+	.	source_transcript=ENST00000510392.1;source_transcript_name=XKRY-201;source_gene=ENSG00000250868.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000250868.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000510392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000510392.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY;transcript_id=HG00140_ch_T0001910;gene_id=HG00140_ch_G0000742;Parent=HG00140_ch_T0001910;transcript_name=HG00140_ch_T0001910;gene_name=XKRY;ID=intron:HG00140_ch_T0001910:0;Name=XKRY;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	491480	492244	.	+	.	source_transcript=ENST00000510392.1;source_transcript_name=XKRY-201;source_gene=ENSG00000250868.5;source_gene_biotype=transcribed_unprocessed_pseudogene;original_gene_id=ENSG00000250868.5;gene_biotype=transcribed_unprocessed_pseudogene;transcript_biotype=transcribed_unprocessed_pseudogene;alignment_id=ENST00000510392.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000510392.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY;transcript_id=HG00140_ch_T0001910;gene_id=HG00140_ch_G0000742;Parent=HG00140_ch_T0001910;transcript_name=HG00140_ch_T0001910;gene_name=XKRY;ID=exon:HG00140_ch_T0001910:1;Name=XKRY;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	gene	490800	492380	.	+	.	source_gene_common_name=XKRY;source_gene=ENSG00000290724.1;gene_id=HG00140_ch_G0000743;gene_biotype=lncRNA;gene_name=XKRY;gene_sources=liftoff;ID=HG00140_ch_G0000743;Name=XKRY
HG00140_chrY_random0000086	CAT	transcript	490800	492380	1000	+	.	source_transcript=ENST00000624960.1;source_transcript_name=XKRY-202;source_gene=ENSG00000290724.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290724.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000624960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000624960.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY;transcript_id=HG00140_ch_T0001911;gene_id=HG00140_ch_G0000743;Parent=HG00140_ch_G0000743;transcript_name=HG00140_ch_T0001911;gene_name=XKRY;ID=HG00140_ch_T0001911;Name=XKRY
HG00140_chrY_random0000086	CAT	exon	490800	492380	.	+	.	source_transcript=ENST00000624960.1;source_transcript_name=XKRY-202;source_gene=ENSG00000290724.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000290724.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000624960.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000624960.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY;transcript_id=HG00140_ch_T0001911;gene_id=HG00140_ch_G0000743;Parent=HG00140_ch_T0001911;transcript_name=HG00140_ch_T0001911;gene_name=XKRY;ID=exon:HG00140_ch_T0001911:0;Name=XKRY;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	gene	503236	504360	.	+	.	source_gene_common_name=ACTG1P2;source_gene=ENSG00000229129.1;alternative_source_transcripts=ENST00000415776.1,ENST00000425411.1;gene_id=HG00140_ch_G0000744;gene_biotype=processed_pseudogene;gene_name=ACTG1P2;gene_sources=liftoff;ID=HG00140_ch_G0000744;Name=ACTG1P2
HG00140_chrY_random0000086	CAT	transcript	503236	504360	1000	+	.	source_transcript=ENST00000415776.1;source_transcript_name=ACTG1P2-201;source_gene=ENSG00000229129.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229129.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000415776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415776.1;transcript_score=200.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ACTG1P2;alternative_source_transcripts=ENST00000415776.1,ENST00000425411.1;transcript_id=HG00140_ch_T0001912;gene_id=HG00140_ch_G0000744;Parent=HG00140_ch_G0000744;transcript_name=HG00140_ch_T0001912;gene_name=ACTG1P2;ID=HG00140_ch_T0001912;Name=ACTG1P2
HG00140_chrY_random0000086	CAT	exon	503236	504360	.	+	.	source_transcript=ENST00000415776.1;source_transcript_name=ACTG1P2-201;source_gene=ENSG00000229129.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000229129.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000415776.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000415776.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ACTG1P2;alternative_source_transcripts=ENST00000415776.1,ENST00000425411.1;transcript_id=HG00140_ch_T0001912;gene_id=HG00140_ch_G0000744;Parent=HG00140_ch_T0001912;transcript_name=HG00140_ch_T0001912;gene_name=ACTG1P2;ID=exon:HG00140_ch_T0001912:0;Name=ACTG1P2;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	gene	531610	558307	.	+	.	source_gene_common_name=ENSG00000310304;source_gene=ENSG00000310304.1;alternative_source_transcripts=ENST00000848900.1;gene_id=HG00140_ch_G0000745;gene_biotype=lncRNA;gene_name=ENSG00000310304;gene_sources=liftoff;ID=HG00140_ch_G0000745;Name=ENSG00000310304
HG00140_chrY_random0000086	CAT	transcript	531610	543791	1000	+	.	source_transcript=ENST00000848900.1;source_transcript_name=ENST00000848900;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848900.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848900.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848900.1;transcript_id=HG00140_ch_T0001913;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_G0000745;transcript_name=HG00140_ch_T0001913;gene_name=ENSG00000310304;ID=HG00140_ch_T0001913;Name=ENSG00000310304
HG00140_chrY_random0000086	CAT	exon	531610	532051	.	+	.	source_transcript=ENST00000848900.1;source_transcript_name=ENST00000848900;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848900.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848900.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848900.1;transcript_id=HG00140_ch_T0001913;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_T0001913;transcript_name=HG00140_ch_T0001913;gene_name=ENSG00000310304;ID=exon:HG00140_ch_T0001913:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	532052	542494	.	+	.	source_transcript=ENST00000848900.1;source_transcript_name=ENST00000848900;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848900.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848900.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848900.1;transcript_id=HG00140_ch_T0001913;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_T0001913;transcript_name=HG00140_ch_T0001913;gene_name=ENSG00000310304;ID=intron:HG00140_ch_T0001913:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	542495	543791	.	+	.	source_transcript=ENST00000848900.1;source_transcript_name=ENST00000848900;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848900.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848900.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848900.1;transcript_id=HG00140_ch_T0001913;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_T0001913;transcript_name=HG00140_ch_T0001913;gene_name=ENSG00000310304;ID=exon:HG00140_ch_T0001913:1;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	transcript	531668	547351	1000	+	.	source_transcript=ENST00000848895.1;source_transcript_name=ENST00000848895;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848895.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848895.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848895.1;transcript_id=HG00140_ch_T0001914;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_G0000745;transcript_name=HG00140_ch_T0001914;gene_name=ENSG00000310304;ID=HG00140_ch_T0001914;Name=ENSG00000310304
HG00140_chrY_random0000086	CAT	exon	531668	532051	.	+	.	source_transcript=ENST00000848895.1;source_transcript_name=ENST00000848895;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848895.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848895.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848895.1;transcript_id=HG00140_ch_T0001914;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_T0001914;transcript_name=HG00140_ch_T0001914;gene_name=ENSG00000310304;ID=exon:HG00140_ch_T0001914:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	532052	542494	.	+	.	source_transcript=ENST00000848895.1;source_transcript_name=ENST00000848895;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848895.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848895.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848895.1;transcript_id=HG00140_ch_T0001914;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_T0001914;transcript_name=HG00140_ch_T0001914;gene_name=ENSG00000310304;ID=intron:HG00140_ch_T0001914:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	542495	542619	.	+	.	source_transcript=ENST00000848895.1;source_transcript_name=ENST00000848895;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848895.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848895.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848895.1;transcript_id=HG00140_ch_T0001914;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_T0001914;transcript_name=HG00140_ch_T0001914;gene_name=ENSG00000310304;ID=exon:HG00140_ch_T0001914:1;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	542620	546307	.	+	.	source_transcript=ENST00000848895.1;source_transcript_name=ENST00000848895;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848895.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848895.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848895.1;transcript_id=HG00140_ch_T0001914;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_T0001914;transcript_name=HG00140_ch_T0001914;gene_name=ENSG00000310304;ID=intron:HG00140_ch_T0001914:1;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	546308	547351	.	+	.	source_transcript=ENST00000848895.1;source_transcript_name=ENST00000848895;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848895.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848895.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848895.1;transcript_id=HG00140_ch_T0001914;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_T0001914;transcript_name=HG00140_ch_T0001914;gene_name=ENSG00000310304;ID=exon:HG00140_ch_T0001914:2;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	transcript	531693	547343	1000	+	.	source_transcript=ENST00000848898.1;source_transcript_name=ENST00000848898;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848898.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848898.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848898.1;transcript_id=HG00140_ch_T0001915;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_G0000745;transcript_name=HG00140_ch_T0001915;gene_name=ENSG00000310304;ID=HG00140_ch_T0001915;Name=ENSG00000310304
HG00140_chrY_random0000086	CAT	exon	531693	532051	.	+	.	source_transcript=ENST00000848898.1;source_transcript_name=ENST00000848898;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848898.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848898.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848898.1;transcript_id=HG00140_ch_T0001915;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_T0001915;transcript_name=HG00140_ch_T0001915;gene_name=ENSG00000310304;ID=exon:HG00140_ch_T0001915:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	532052	542498	.	+	.	source_transcript=ENST00000848898.1;source_transcript_name=ENST00000848898;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848898.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848898.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848898.1;transcript_id=HG00140_ch_T0001915;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_T0001915;transcript_name=HG00140_ch_T0001915;gene_name=ENSG00000310304;ID=intron:HG00140_ch_T0001915:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	542499	542619	.	+	.	source_transcript=ENST00000848898.1;source_transcript_name=ENST00000848898;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848898.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848898.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848898.1;transcript_id=HG00140_ch_T0001915;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_T0001915;transcript_name=HG00140_ch_T0001915;gene_name=ENSG00000310304;ID=exon:HG00140_ch_T0001915:1;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	542620	546307	.	+	.	source_transcript=ENST00000848898.1;source_transcript_name=ENST00000848898;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848898.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848898.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848898.1;transcript_id=HG00140_ch_T0001915;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_T0001915;transcript_name=HG00140_ch_T0001915;gene_name=ENSG00000310304;ID=intron:HG00140_ch_T0001915:1;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	546308	547343	.	+	.	source_transcript=ENST00000848898.1;source_transcript_name=ENST00000848898;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848898.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848898.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848898.1;transcript_id=HG00140_ch_T0001915;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_T0001915;transcript_name=HG00140_ch_T0001915;gene_name=ENSG00000310304;ID=exon:HG00140_ch_T0001915:2;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	transcript	531693	547343	1000	+	.	source_transcript=ENST00000848897.1;source_transcript_name=ENST00000848897;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848897.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848897.1;transcript_id=HG00140_ch_T0001916;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_G0000745;transcript_name=HG00140_ch_T0001916;gene_name=ENSG00000310304;ID=HG00140_ch_T0001916;Name=ENSG00000310304
HG00140_chrY_random0000086	CAT	exon	531693	531982	.	+	.	source_transcript=ENST00000848897.1;source_transcript_name=ENST00000848897;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848897.1;transcript_id=HG00140_ch_T0001916;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_T0001916;transcript_name=HG00140_ch_T0001916;gene_name=ENSG00000310304;ID=exon:HG00140_ch_T0001916:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	531983	542494	.	+	.	source_transcript=ENST00000848897.1;source_transcript_name=ENST00000848897;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848897.1;transcript_id=HG00140_ch_T0001916;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_T0001916;transcript_name=HG00140_ch_T0001916;gene_name=ENSG00000310304;ID=intron:HG00140_ch_T0001916:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	542495	542619	.	+	.	source_transcript=ENST00000848897.1;source_transcript_name=ENST00000848897;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848897.1;transcript_id=HG00140_ch_T0001916;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_T0001916;transcript_name=HG00140_ch_T0001916;gene_name=ENSG00000310304;ID=exon:HG00140_ch_T0001916:1;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	542620	546307	.	+	.	source_transcript=ENST00000848897.1;source_transcript_name=ENST00000848897;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848897.1;transcript_id=HG00140_ch_T0001916;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_T0001916;transcript_name=HG00140_ch_T0001916;gene_name=ENSG00000310304;ID=intron:HG00140_ch_T0001916:1;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	546308	547343	.	+	.	source_transcript=ENST00000848897.1;source_transcript_name=ENST00000848897;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848897.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848897.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848897.1;transcript_id=HG00140_ch_T0001916;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_T0001916;transcript_name=HG00140_ch_T0001916;gene_name=ENSG00000310304;ID=exon:HG00140_ch_T0001916:2;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	transcript	531695	547348	1000	+	.	source_transcript=ENST00000848896.1;source_transcript_name=ENST00000848896;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848896.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848896.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848896.1;transcript_id=HG00140_ch_T0001917;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_G0000745;transcript_name=HG00140_ch_T0001917;gene_name=ENSG00000310304;ID=HG00140_ch_T0001917;Name=ENSG00000310304
HG00140_chrY_random0000086	CAT	exon	531695	532051	.	+	.	source_transcript=ENST00000848896.1;source_transcript_name=ENST00000848896;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848896.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848896.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848896.1;transcript_id=HG00140_ch_T0001917;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_T0001917;transcript_name=HG00140_ch_T0001917;gene_name=ENSG00000310304;ID=exon:HG00140_ch_T0001917:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	532052	546307	.	+	.	source_transcript=ENST00000848896.1;source_transcript_name=ENST00000848896;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848896.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848896.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848896.1;transcript_id=HG00140_ch_T0001917;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_T0001917;transcript_name=HG00140_ch_T0001917;gene_name=ENSG00000310304;ID=intron:HG00140_ch_T0001917:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	546308	547348	.	+	.	source_transcript=ENST00000848896.1;source_transcript_name=ENST00000848896;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848896.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848896.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848896.1;transcript_id=HG00140_ch_T0001917;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_T0001917;transcript_name=HG00140_ch_T0001917;gene_name=ENSG00000310304;ID=exon:HG00140_ch_T0001917:1;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	transcript	531696	534202	1000	+	.	source_transcript=ENST00000848904.1;source_transcript_name=ENST00000848904;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848904.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848904.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848904.1;transcript_id=HG00140_ch_T0001918;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_G0000745;transcript_name=HG00140_ch_T0001918;gene_name=ENSG00000310304;ID=HG00140_ch_T0001918;Name=ENSG00000310304
HG00140_chrY_random0000086	CAT	exon	531696	532051	.	+	.	source_transcript=ENST00000848904.1;source_transcript_name=ENST00000848904;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848904.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848904.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848904.1;transcript_id=HG00140_ch_T0001918;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_T0001918;transcript_name=HG00140_ch_T0001918;gene_name=ENSG00000310304;ID=exon:HG00140_ch_T0001918:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	532052	533640	.	+	.	source_transcript=ENST00000848904.1;source_transcript_name=ENST00000848904;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848904.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848904.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848904.1;transcript_id=HG00140_ch_T0001918;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_T0001918;transcript_name=HG00140_ch_T0001918;gene_name=ENSG00000310304;ID=intron:HG00140_ch_T0001918:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	533641	534202	.	+	.	source_transcript=ENST00000848904.1;source_transcript_name=ENST00000848904;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848904.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848904.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848904.1;transcript_id=HG00140_ch_T0001918;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_T0001918;transcript_name=HG00140_ch_T0001918;gene_name=ENSG00000310304;ID=exon:HG00140_ch_T0001918:1;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	transcript	531699	543791	1000	+	.	source_transcript=ENST00000848901.1;source_transcript_name=ENST00000848901;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848901.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848901.1;transcript_id=HG00140_ch_T0001919;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_G0000745;transcript_name=HG00140_ch_T0001919;gene_name=ENSG00000310304;ID=HG00140_ch_T0001919;Name=ENSG00000310304
HG00140_chrY_random0000086	CAT	exon	531699	531982	.	+	.	source_transcript=ENST00000848901.1;source_transcript_name=ENST00000848901;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848901.1;transcript_id=HG00140_ch_T0001919;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_T0001919;transcript_name=HG00140_ch_T0001919;gene_name=ENSG00000310304;ID=exon:HG00140_ch_T0001919:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	531983	542494	.	+	.	source_transcript=ENST00000848901.1;source_transcript_name=ENST00000848901;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848901.1;transcript_id=HG00140_ch_T0001919;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_T0001919;transcript_name=HG00140_ch_T0001919;gene_name=ENSG00000310304;ID=intron:HG00140_ch_T0001919:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	542495	543791	.	+	.	source_transcript=ENST00000848901.1;source_transcript_name=ENST00000848901;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848901.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848901.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848901.1;transcript_id=HG00140_ch_T0001919;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_T0001919;transcript_name=HG00140_ch_T0001919;gene_name=ENSG00000310304;ID=exon:HG00140_ch_T0001919:1;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	transcript	531704	542655	1000	+	.	source_transcript=ENST00000848902.1;source_transcript_name=ENST00000848902;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848902.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848902.1;transcript_id=HG00140_ch_T0001920;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_G0000745;transcript_name=HG00140_ch_T0001920;gene_name=ENSG00000310304;ID=HG00140_ch_T0001920;Name=ENSG00000310304
HG00140_chrY_random0000086	CAT	exon	531704	532051	.	+	.	source_transcript=ENST00000848902.1;source_transcript_name=ENST00000848902;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848902.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848902.1;transcript_id=HG00140_ch_T0001920;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_T0001920;transcript_name=HG00140_ch_T0001920;gene_name=ENSG00000310304;ID=exon:HG00140_ch_T0001920:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	532052	542498	.	+	.	source_transcript=ENST00000848902.1;source_transcript_name=ENST00000848902;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848902.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848902.1;transcript_id=HG00140_ch_T0001920;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_T0001920;transcript_name=HG00140_ch_T0001920;gene_name=ENSG00000310304;ID=intron:HG00140_ch_T0001920:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	542499	542655	.	+	.	source_transcript=ENST00000848902.1;source_transcript_name=ENST00000848902;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848902.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848902.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848902.1;transcript_id=HG00140_ch_T0001920;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_T0001920;transcript_name=HG00140_ch_T0001920;gene_name=ENSG00000310304;ID=exon:HG00140_ch_T0001920:1;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	transcript	531735	558307	1000	+	.	source_transcript=ENST00000848894.1;source_transcript_name=ENST00000848894;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848894.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848894.1;transcript_id=HG00140_ch_T0001921;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_G0000745;transcript_name=HG00140_ch_T0001921;gene_name=ENSG00000310304;ID=HG00140_ch_T0001921;Name=ENSG00000310304
HG00140_chrY_random0000086	CAT	exon	531735	532051	.	+	.	source_transcript=ENST00000848894.1;source_transcript_name=ENST00000848894;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848894.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848894.1;transcript_id=HG00140_ch_T0001921;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_T0001921;transcript_name=HG00140_ch_T0001921;gene_name=ENSG00000310304;ID=exon:HG00140_ch_T0001921:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	532052	555187	.	+	.	source_transcript=ENST00000848894.1;source_transcript_name=ENST00000848894;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848894.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848894.1;transcript_id=HG00140_ch_T0001921;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_T0001921;transcript_name=HG00140_ch_T0001921;gene_name=ENSG00000310304;ID=intron:HG00140_ch_T0001921:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	555188	555406	.	+	.	source_transcript=ENST00000848894.1;source_transcript_name=ENST00000848894;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848894.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848894.1;transcript_id=HG00140_ch_T0001921;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_T0001921;transcript_name=HG00140_ch_T0001921;gene_name=ENSG00000310304;ID=exon:HG00140_ch_T0001921:1;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	555407	556298	.	+	.	source_transcript=ENST00000848894.1;source_transcript_name=ENST00000848894;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848894.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848894.1;transcript_id=HG00140_ch_T0001921;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_T0001921;transcript_name=HG00140_ch_T0001921;gene_name=ENSG00000310304;ID=intron:HG00140_ch_T0001921:1;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	556299	556423	.	+	.	source_transcript=ENST00000848894.1;source_transcript_name=ENST00000848894;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848894.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848894.1;transcript_id=HG00140_ch_T0001921;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_T0001921;transcript_name=HG00140_ch_T0001921;gene_name=ENSG00000310304;ID=exon:HG00140_ch_T0001921:2;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	556424	558016	.	+	.	source_transcript=ENST00000848894.1;source_transcript_name=ENST00000848894;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848894.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848894.1;transcript_id=HG00140_ch_T0001921;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_T0001921;transcript_name=HG00140_ch_T0001921;gene_name=ENSG00000310304;ID=intron:HG00140_ch_T0001921:2;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	558017	558307	.	+	.	source_transcript=ENST00000848894.1;source_transcript_name=ENST00000848894;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848894.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848894.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848894.1;transcript_id=HG00140_ch_T0001921;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_T0001921;transcript_name=HG00140_ch_T0001921;gene_name=ENSG00000310304;ID=exon:HG00140_ch_T0001921:3;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	transcript	531735	546817	1000	+	.	source_transcript=ENST00000848899.1;source_transcript_name=ENST00000848899;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848899.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848899.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848899.1;transcript_id=HG00140_ch_T0001922;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_G0000745;transcript_name=HG00140_ch_T0001922;gene_name=ENSG00000310304;ID=HG00140_ch_T0001922;Name=ENSG00000310304
HG00140_chrY_random0000086	CAT	exon	531735	531982	.	+	.	source_transcript=ENST00000848899.1;source_transcript_name=ENST00000848899;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848899.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848899.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848899.1;transcript_id=HG00140_ch_T0001922;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_T0001922;transcript_name=HG00140_ch_T0001922;gene_name=ENSG00000310304;ID=exon:HG00140_ch_T0001922:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	531983	546307	.	+	.	source_transcript=ENST00000848899.1;source_transcript_name=ENST00000848899;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848899.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848899.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848899.1;transcript_id=HG00140_ch_T0001922;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_T0001922;transcript_name=HG00140_ch_T0001922;gene_name=ENSG00000310304;ID=intron:HG00140_ch_T0001922:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	546308	546817	.	+	.	source_transcript=ENST00000848899.1;source_transcript_name=ENST00000848899;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848899.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848899.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848899.1;transcript_id=HG00140_ch_T0001922;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_T0001922;transcript_name=HG00140_ch_T0001922;gene_name=ENSG00000310304;ID=exon:HG00140_ch_T0001922:1;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	transcript	531745	537633	1000	+	.	source_transcript=ENST00000848903.1;source_transcript_name=ENST00000848903;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848903.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848903.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848903.1;transcript_id=HG00140_ch_T0001923;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_G0000745;transcript_name=HG00140_ch_T0001923;gene_name=ENSG00000310304;ID=HG00140_ch_T0001923;Name=ENSG00000310304
HG00140_chrY_random0000086	CAT	exon	531745	532051	.	+	.	source_transcript=ENST00000848903.1;source_transcript_name=ENST00000848903;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848903.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848903.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848903.1;transcript_id=HG00140_ch_T0001923;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_T0001923;transcript_name=HG00140_ch_T0001923;gene_name=ENSG00000310304;ID=exon:HG00140_ch_T0001923:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	intron	532052	536999	.	+	.	source_transcript=ENST00000848903.1;source_transcript_name=ENST00000848903;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848903.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848903.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848903.1;transcript_id=HG00140_ch_T0001923;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_T0001923;transcript_name=HG00140_ch_T0001923;gene_name=ENSG00000310304;ID=intron:HG00140_ch_T0001923:0;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	exon	537000	537633	.	+	.	source_transcript=ENST00000848903.1;source_transcript_name=ENST00000848903;source_gene=ENSG00000310304.1;source_gene_biotype=lncRNA;original_gene_id=ENSG00000310304.1;gene_biotype=lncRNA;transcript_biotype=lncRNA;alignment_id=ENST00000848903.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000848903.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ENSG00000310304;alternative_source_transcripts=ENST00000848903.1;transcript_id=HG00140_ch_T0001923;gene_id=HG00140_ch_G0000745;Parent=HG00140_ch_T0001923;transcript_name=HG00140_ch_T0001923;gene_name=ENSG00000310304;ID=exon:HG00140_ch_T0001923:1;Name=ENSG00000310304;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	gene	534286	534614	.	-	.	source_gene_common_name=ELOCP26;source_gene=ENSG00000236599.1;alternative_source_transcripts=ENST00000436067.1;gene_id=HG00140_ch_G0000746;gene_biotype=processed_pseudogene;gene_name=ELOCP26;gene_sources=liftoff;ID=HG00140_ch_G0000746;Name=ELOCP26
HG00140_chrY_random0000086	CAT	transcript	534286	534614	1000	-	.	source_transcript=ENST00000436067.1;source_transcript_name=ELOCP26-201;source_gene=ENSG00000236599.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000236599.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436067.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436067.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP26;alternative_source_transcripts=ENST00000436067.1;transcript_id=HG00140_ch_T0001924;gene_id=HG00140_ch_G0000746;Parent=HG00140_ch_G0000746;transcript_name=HG00140_ch_T0001924;gene_name=ELOCP26;ID=HG00140_ch_T0001924;Name=ELOCP26
HG00140_chrY_random0000086	CAT	exon	534286	534614	.	-	.	source_transcript=ENST00000436067.1;source_transcript_name=ELOCP26-201;source_gene=ENSG00000236599.1;source_gene_biotype=processed_pseudogene;original_gene_id=ENSG00000236599.1;gene_biotype=processed_pseudogene;transcript_biotype=processed_pseudogene;alignment_id=ENST00000436067.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000436067.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ELOCP26;alternative_source_transcripts=ENST00000436067.1;transcript_id=HG00140_ch_T0001924;gene_id=HG00140_ch_G0000746;Parent=HG00140_ch_T0001924;transcript_name=HG00140_ch_T0001924;gene_name=ELOCP26;ID=exon:HG00140_ch_T0001924:0;Name=ELOCP26;rna_support=False;reference_support=False
HG00140_chrY_random0000086	CAT	gene	538189	539768	.	-	.	source_gene_common_name=CDY9P;source_gene=ENSG00000232899.1;alternative_source_transcripts=ENST00000451397.1;gene_id=HG00140_ch_G0000747;gene_biotype=unprocessed_pseudogene;gene_name=CDY9P;gene_sources=liftoff;ID=HG00140_ch_G0000747;Name=CDY9P
HG00140_chrY_random0000086	CAT	transcript	538189	539768	1000	-	.	source_transcript=ENST00000451397.1;source_transcript_name=CDY9P-201;source_gene=ENSG00000232899.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232899.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000451397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451397.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY9P;alternative_source_transcripts=ENST00000451397.1;transcript_id=HG00140_ch_T0001925;gene_id=HG00140_ch_G0000747;Parent=HG00140_ch_G0000747;transcript_name=HG00140_ch_T0001925;gene_name=CDY9P;ID=HG00140_ch_T0001925;Name=CDY9P
HG00140_chrY_random0000086	CAT	exon	538189	539768	.	-	.	source_transcript=ENST00000451397.1;source_transcript_name=CDY9P-201;source_gene=ENSG00000232899.1;source_gene_biotype=unprocessed_pseudogene;original_gene_id=ENSG00000232899.1;gene_biotype=unprocessed_pseudogene;transcript_biotype=unprocessed_pseudogene;alignment_id=ENST00000451397.1;alignment_mode=liftoff;normalized_transcript_id=ENST00000451397.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY9P;alternative_source_transcripts=ENST00000451397.1;transcript_id=HG00140_ch_T0001925;gene_id=HG00140_ch_G0000747;Parent=HG00140_ch_T0001925;transcript_name=HG00140_ch_T0001925;gene_name=CDY9P;ID=exon:HG00140_ch_T0001925:0;Name=CDY9P;rna_support=False;reference_support=False